comparison toolExample.xml @ 3:079f44f300da draft

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author k3v1n
date Tue, 18 Aug 2020 02:38:40 -0400
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2:e51d6d447c4f 3:079f44f300da
1 <tool id="fa_gc_content_2020" name="Compute GC content 2020" version="0.1.0">
2 <description>for each sequence in a file</description>
3 <command>perl 'https://k3v1n@toolshed.g2.bx.psu.edu/repos/k3v1n/gene_test/toolExample.pl' '$input' '$output'</command>
4 <inputs>
5 <param format="fasta" name="input" type="data" label="Source file"/>
6 </inputs>
7 <outputs>
8 <data format="tabular" name="output" />
9 </outputs>
10
11 <tests>
12 <test>
13 <param name="input" value="fa_gc_content_input.fa"/>
14 <output name="out_file1" file="fa_gc_content_output.txt"/>
15 </test>
16 </tests>
17
18 <help>
19 This tool computes GC content from a FASTA file.
20 </help>
21
22 </tool>