Mercurial > repos > k3v1n > gene_test

changeset 3:079f44f300da draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author k3v1n
date Tue, 18 Aug 2020 02:38:40 -0400
parents e51d6d447c4f
children c2db3e383cc0
files toolExample.xml
diffstat 1 files changed, 22 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/toolExample.xml	Tue Aug 18 02:38:40 2020 -0400
@@ -0,0 +1,22 @@
+<tool id="fa_gc_content_2020" name="Compute GC content 2020" version="0.1.0">
+  <description>for each sequence in a file</description>
+  <command>perl 'https://k3v1n@toolshed.g2.bx.psu.edu/repos/k3v1n/gene_test/toolExample.pl' '$input' '$output'</command>
+  <inputs>
+    <param format="fasta" name="input" type="data" label="Source file"/>
+  </inputs>
+  <outputs>
+    <data format="tabular" name="output" />
+  </outputs>
+
+  <tests>
+    <test>
+      <param name="input" value="fa_gc_content_input.fa"/>
+      <output name="out_file1" file="fa_gc_content_output.txt"/>
+    </test>
+  </tests>
+
+  <help>
+This tool computes GC content from a FASTA file.
+  </help>
+
+</tool>
\ No newline at end of file