Mercurial > repos > konradpaszkiewicz > assemblystats
comparison README_ASSEMBLY_STATS @ 0:6544228ea290 default tip
Migrated tool version 1.0.1 from old tool shed archive to new tool shed repository
| author | konradpaszkiewicz |
|---|---|
| date | Tue, 07 Jun 2011 16:24:46 -0400 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:6544228ea290 |
|---|---|
| 1 #Created 07/01/2011 | |
| 2 #Konrad Paszkiewicz, University of Exeter | |
| 3 | |
| 4 Assembly stats | |
| 5 | |
| 6 This series of scripts calculates various metrics on an input FASTA file. Typically this is most useful on either denovo genomic or transcriptomic data. | |
| 7 | |
| 8 Prerequisites: | |
| 9 | |
| 10 1. The bundled perl script fasta_summary.pl | |
| 11 | |
| 12 Limitations: | |
| 13 | |
| 14 Ideally this should output a composite dataset of some sort |
