Mercurial > repos > laurenmarazzi > netisce_test
comparison tools/myTools/13_translate_perts.xml @ 1:7e5c71b2e71f draft default tip
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author | laurenmarazzi |
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date | Wed, 22 Dec 2021 16:00:34 +0000 |
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0:f24d4892aaed | 1:7e5c71b2e71f |
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1 <tool id="netisce13" name="Netisce Step 13" version="0.1.0" R_template_version="3.6.3"> | |
2 <description>Translates combinations of perturbations on FVS control nodes into readable format.</description> | |
3 | |
4 <requirements> | |
5 <requirement type="package" version="1.0.7">dplyr</requirement> | |
6 <requirement type="package" version="3.3.0">ggplot2</requirement> | |
7 </requirements> | |
8 | |
9 <command> Rscript '$__tool_directory__/bin/pertanalysis.R' '$perts' successful_controlnode_perturbations.txt</command> | |
10 | |
11 <inputs> | |
12 <param name="perts" type="data" format="txt" label="Successful Perturbations"/> | |
13 </inputs> | |
14 | |
15 <outputs> | |
16 <data name="output" format="txt" from_work_dir="successful_controlnode_perturbations.txt" label="FVS control node perturbations that passed both filtering criteria"/> | |
17 </outputs> | |
18 | |
19 <tests> | |
20 <test> | |
21 <param name="perts" value="extract_perts.txt" /> | |
22 <output name="output" value="successful_controlnode_perturbations.txt" ftype="txt" /> | |
23 </test> | |
24 </tests> | |
25 | |
26 <help> | |
27 This tool translates combinations of perturbations on FVS control nodes into readable format | |
28 Required Inputs: | |
29 1. Successful Perturbations that shifted network from undesired to desired state | |
30 </help> | |
31 | |
32 </tool> |