Mercurial > repos > laurenmarazzi > netisce_test
view tools/myTools/13_translate_perts.xml @ 1:7e5c71b2e71f draft default tip
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author | laurenmarazzi |
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date | Wed, 22 Dec 2021 16:00:34 +0000 |
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<tool id="netisce13" name="Netisce Step 13" version="0.1.0" R_template_version="3.6.3"> <description>Translates combinations of perturbations on FVS control nodes into readable format.</description> <requirements> <requirement type="package" version="1.0.7">dplyr</requirement> <requirement type="package" version="3.3.0">ggplot2</requirement> </requirements> <command> Rscript '$__tool_directory__/bin/pertanalysis.R' '$perts' successful_controlnode_perturbations.txt</command> <inputs> <param name="perts" type="data" format="txt" label="Successful Perturbations"/> </inputs> <outputs> <data name="output" format="txt" from_work_dir="successful_controlnode_perturbations.txt" label="FVS control node perturbations that passed both filtering criteria"/> </outputs> <tests> <test> <param name="perts" value="extract_perts.txt" /> <output name="output" value="successful_controlnode_perturbations.txt" ftype="txt" /> </test> </tests> <help> This tool translates combinations of perturbations on FVS control nodes into readable format Required Inputs: 1. Successful Perturbations that shifted network from undesired to desired state </help> </tool>