Mercurial > repos > lionelguy > prokka

changeset 7:39bc9c61c55b draft

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Uploaded
author lionelguy
date Thu, 05 Sep 2013 07:42:05 -0400
parents 323490ee1feb
children 6acf850bca99
files prokka.xml
diffstat 1 files changed, 10 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/prokka.xml	Thu Sep 05 04:11:04 2013 -0400
+++ b/prokka.xml	Thu Sep 05 07:42:05 2013 -0400
@@ -4,6 +4,7 @@
     <requirement type="package" version="1.7">prokka</requirement>
     <requirement type="package" version="1.2.36">aragorn</requirement>
     <requirement type="package" version="2.60">prodigal</requirement>
+    <!--<requirement type="package" version="0.1">package_barrnap_0_1</requirement>-->
     <requirement type="package" version="0.1">barrnap</requirement>
     <!-- <requirement type="package" version="4.1">signalp</requirement> -->
     <!-- <requirement type="package" version="3.0">infernal</requirement> -->
@@ -104,6 +105,15 @@
 	   source="both"
 	   level="fatal"
 	   description="Illegal division by zero" />
+    <regex match="no suitable sequence entries"
+	   source="both"
+	   level="fatal"
+	   description="Input contains no suitable sequences" />
+    <regex match="Can't find required"
+	   source="both"
+	   level="fatal"
+	   description="Dependencies not available" />
+   
   </stdio> 
   
   <help>