Mercurial > repos > lparsons > cutadapt
changeset 14:c76ee709ffb9 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cutadapt commit 32b4794bb410494ffcfa0da397aaca7fd830a705
| author | iuc |
|---|---|
| date | Sun, 05 Aug 2018 04:59:53 -0400 |
| parents | f5fdf41c08b8 |
| children | 660cffd8d92a |
| files | cutadapt.xml |
| diffstat | 1 files changed, 3 insertions(+), 2 deletions(-) [+] |
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--- a/cutadapt.xml Tue Jun 12 15:38:04 2018 -0400 +++ b/cutadapt.xml Sun Aug 05 04:59:53 2018 -0400 @@ -1,4 +1,4 @@ -<tool id="cutadapt" name="Cutadapt" version="1.16.1" profile="17.09"> +<tool id="cutadapt" name="Cutadapt" version="1.16.2" profile="17.09"> <description>Remove adapter sequences from Fastq/Fasta</description> <macros> <import>macros.xml</import> @@ -27,7 +27,8 @@ #set paired = True #set input_1 = $library.input_1.forward #set input_2 = $library.input_1.reverse -#set read1 = re.sub('[^\w\-\s]', '_', str($library.input_1.name)) +#set read1 = re.sub('[^\w\-\s]', '_', str($library.input_1.name)) + "_1" +#set read2 = re.sub('[^\w\-\s]', '_', str($library.input_1.name)) + "_2" #else #set input_1 = $library.input_1 #set read1 = re.sub('[^\w\-\s]', '_', str($library.input_1.element_identifier))