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174 Explore
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213 <path d="M1,1l6.2,6L13,1"></path>
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214 </svg>
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215 </summary>
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216
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217 <div class="dropdown-menu flex-auto rounded-1 bg-white px-0 pt-2 pb-4 mt-0 p-4 left-n4 position-absolute">
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218 <a href="/pricing" class="pb-2 lh-condensed-ultra d-block link-gray-dark no-underline h5 Bump-link--hover" data-ga-click="(Logged out) Header, go to Pricing">Plans <span class="Bump-link-symbol float-right text-normal text-gray-light">→</span></a>
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219
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220 <ul class="list-style-none mb-3">
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221 <li class="edge-item-fix"><a href="/pricing#feature-comparison" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Compare plans">Compare plans</a></li>
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222 <li class="edge-item-fix"><a href="https://enterprise.github.com/contact" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Contact Sales">Contact Sales</a></li>
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223 </ul>
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224
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225 <ul class="list-style-none mb-0 border-top pt-3">
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226 <li class="edge-item-fix"><a href="/nonprofit" class="py-2 lh-condensed-ultra d-block no-underline link-gray-dark no-underline h5 Bump-link--hover" data-ga-click="(Logged out) Header, go to Nonprofits">Nonprofit <span class="Bump-link-symbol float-right text-normal text-gray-light">→</span></a></li>
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227 <li class="edge-item-fix"><a href="https://education.github.com" class="py-2 pb-0 lh-condensed-ultra d-block no-underline link-gray-dark no-underline h5 Bump-link--hover" data-ga-click="(Logged out) Header, go to Education">Education <span class="Bump-link-symbol float-right text-normal text-gray-light">→</span></a></li>
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228 </ul>
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229 </div>
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230 </details>
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231 </li>
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232 </ul>
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233 </nav>
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234
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235 <div class="d-flex flex-items-center px-0 text-center text-left">
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236 <div class="d-lg-flex ">
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237 <div class="header-search mr-3 scoped-search site-scoped-search js-site-search position-relative js-jump-to"
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238 role="combobox"
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239 aria-owns="jump-to-results"
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240 aria-label="Search or jump to"
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241 aria-haspopup="listbox"
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242 aria-expanded="false"
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243 >
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244 <div class="position-relative">
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245 <!-- '"` --><!-- </textarea></xmp> --></option></form><form class="js-site-search-form" role="search" aria-label="Site" data-scope-type="Repository" data-scope-id="189599350" data-scoped-search-url="/huster16/gatk-tools/search" data-unscoped-search-url="/search" action="/huster16/gatk-tools/search" accept-charset="UTF-8" method="get"><input name="utf8" type="hidden" value="✓" />
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246 <label class="form-control input-sm header-search-wrapper p-0 header-search-wrapper-jump-to position-relative d-flex flex-justify-between flex-items-center js-chromeless-input-container">
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247 <input type="text"
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248 class="form-control input-sm header-search-input jump-to-field js-jump-to-field js-site-search-focus js-site-search-field is-clearable"
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249 data-hotkey="s,/"
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250 name="q"
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251 value=""
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252 placeholder="Search"
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253 data-unscoped-placeholder="Search GitHub"
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254 data-scoped-placeholder="Search"
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255 autocapitalize="off"
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256 aria-autocomplete="list"
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257 aria-controls="jump-to-results"
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258 aria-label="Search"
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259 data-jump-to-suggestions-path="/_graphql/GetSuggestedNavigationDestinations#csrf-token=MYscG5aOEWK5QO1LxVWdiStZpn47ml0TjWb+9OnZkh1iOu3q2lfu85ssA/51V0P5USivs11k4JXi80LyFvS0Hw=="
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260 spellcheck="false"
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261 autocomplete="off"
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262 >
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263 <input type="hidden" class="js-site-search-type-field" name="type" >
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264 <img src="https://github.githubassets.com/images/search-key-slash.svg" alt="" class="mr-2 header-search-key-slash">
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265
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266 <div class="Box position-absolute overflow-hidden d-none jump-to-suggestions js-jump-to-suggestions-container">
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267
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268 <ul class="d-none js-jump-to-suggestions-template-container">
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269
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270
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271 <li class="d-flex flex-justify-start flex-items-center p-0 f5 navigation-item js-navigation-item js-jump-to-suggestion" role="option">
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272 <a tabindex="-1" class="no-underline d-flex flex-auto flex-items-center jump-to-suggestions-path js-jump-to-suggestion-path js-navigation-open p-2" href="">
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273 <div class="jump-to-octicon js-jump-to-octicon flex-shrink-0 mr-2 text-center d-none">
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274 <svg height="16" width="16" class="octicon octicon-repo flex-shrink-0 js-jump-to-octicon-repo d-none" title="Repository" aria-label="Repository" viewBox="0 0 12 16" version="1.1" role="img"><path fill-rule="evenodd" d="M4 9H3V8h1v1zm0-3H3v1h1V6zm0-2H3v1h1V4zm0-2H3v1h1V2zm8-1v12c0 .55-.45 1-1 1H6v2l-1.5-1.5L3 16v-2H1c-.55 0-1-.45-1-1V1c0-.55.45-1 1-1h10c.55 0 1 .45 1 1zm-1 10H1v2h2v-1h3v1h5v-2zm0-10H2v9h9V1z"/></svg>
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275 <svg height="16" width="16" class="octicon octicon-project flex-shrink-0 js-jump-to-octicon-project d-none" title="Project" aria-label="Project" viewBox="0 0 15 16" version="1.1" role="img"><path fill-rule="evenodd" d="M10 12h3V2h-3v10zm-4-2h3V2H6v8zm-4 4h3V2H2v12zm-1 1h13V1H1v14zM14 0H1a1 1 0 0 0-1 1v14a1 1 0 0 0 1 1h13a1 1 0 0 0 1-1V1a1 1 0 0 0-1-1z"/></svg>
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276 <svg height="16" width="16" class="octicon octicon-search flex-shrink-0 js-jump-to-octicon-search d-none" title="Search" aria-label="Search" viewBox="0 0 16 16" version="1.1" role="img"><path fill-rule="evenodd" d="M15.7 13.3l-3.81-3.83A5.93 5.93 0 0 0 13 6c0-3.31-2.69-6-6-6S1 2.69 1 6s2.69 6 6 6c1.3 0 2.48-.41 3.47-1.11l3.83 3.81c.19.2.45.3.7.3.25 0 .52-.09.7-.3a.996.996 0 0 0 0-1.41v.01zM7 10.7c-2.59 0-4.7-2.11-4.7-4.7 0-2.59 2.11-4.7 4.7-4.7 2.59 0 4.7 2.11 4.7 4.7 0 2.59-2.11 4.7-4.7 4.7z"/></svg>
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277 </div>
|
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278
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|
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279 <img class="avatar mr-2 flex-shrink-0 js-jump-to-suggestion-avatar d-none" alt="" aria-label="Team" src="" width="28" height="28">
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280
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|
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281 <div class="jump-to-suggestion-name js-jump-to-suggestion-name flex-auto overflow-hidden text-left no-wrap css-truncate css-truncate-target">
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282 </div>
|
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283
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|
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284 <div class="border rounded-1 flex-shrink-0 bg-gray px-1 text-gray-light ml-1 f6 d-none js-jump-to-badge-search">
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|
285 <span class="js-jump-to-badge-search-text-default d-none" aria-label="in this repository">
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286 In this repository
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287 </span>
|
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|
288 <span class="js-jump-to-badge-search-text-global d-none" aria-label="in all of GitHub">
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289 All GitHub
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290 </span>
|
|
|
291 <span aria-hidden="true" class="d-inline-block ml-1 v-align-middle">↵</span>
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292 </div>
|
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293
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|
|
294 <div aria-hidden="true" class="border rounded-1 flex-shrink-0 bg-gray px-1 text-gray-light ml-1 f6 d-none d-on-nav-focus js-jump-to-badge-jump">
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295 Jump to
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296 <span class="d-inline-block ml-1 v-align-middle">↵</span>
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297 </div>
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298 </a>
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299 </li>
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300
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301 </ul>
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302
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303 <ul class="d-none js-jump-to-no-results-template-container">
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|
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304 <li class="d-flex flex-justify-center flex-items-center f5 d-none js-jump-to-suggestion p-2">
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|
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305 <span class="text-gray">No suggested jump to results</span>
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306 </li>
|
|
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307 </ul>
|
|
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308
|
|
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309 <ul id="jump-to-results" role="listbox" class="p-0 m-0 js-navigation-container jump-to-suggestions-results-container js-jump-to-suggestions-results-container">
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|
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310
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|
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311
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|
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312 <li class="d-flex flex-justify-start flex-items-center p-0 f5 navigation-item js-navigation-item js-jump-to-scoped-search d-none" role="option">
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313 <a tabindex="-1" class="no-underline d-flex flex-auto flex-items-center jump-to-suggestions-path js-jump-to-suggestion-path js-navigation-open p-2" href="">
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314 <div class="jump-to-octicon js-jump-to-octicon flex-shrink-0 mr-2 text-center d-none">
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315 <svg height="16" width="16" class="octicon octicon-repo flex-shrink-0 js-jump-to-octicon-repo d-none" title="Repository" aria-label="Repository" viewBox="0 0 12 16" version="1.1" role="img"><path fill-rule="evenodd" d="M4 9H3V8h1v1zm0-3H3v1h1V6zm0-2H3v1h1V4zm0-2H3v1h1V2zm8-1v12c0 .55-.45 1-1 1H6v2l-1.5-1.5L3 16v-2H1c-.55 0-1-.45-1-1V1c0-.55.45-1 1-1h10c.55 0 1 .45 1 1zm-1 10H1v2h2v-1h3v1h5v-2zm0-10H2v9h9V1z"/></svg>
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316 <svg height="16" width="16" class="octicon octicon-project flex-shrink-0 js-jump-to-octicon-project d-none" title="Project" aria-label="Project" viewBox="0 0 15 16" version="1.1" role="img"><path fill-rule="evenodd" d="M10 12h3V2h-3v10zm-4-2h3V2H6v8zm-4 4h3V2H2v12zm-1 1h13V1H1v14zM14 0H1a1 1 0 0 0-1 1v14a1 1 0 0 0 1 1h13a1 1 0 0 0 1-1V1a1 1 0 0 0-1-1z"/></svg>
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317 <svg height="16" width="16" class="octicon octicon-search flex-shrink-0 js-jump-to-octicon-search d-none" title="Search" aria-label="Search" viewBox="0 0 16 16" version="1.1" role="img"><path fill-rule="evenodd" d="M15.7 13.3l-3.81-3.83A5.93 5.93 0 0 0 13 6c0-3.31-2.69-6-6-6S1 2.69 1 6s2.69 6 6 6c1.3 0 2.48-.41 3.47-1.11l3.83 3.81c.19.2.45.3.7.3.25 0 .52-.09.7-.3a.996.996 0 0 0 0-1.41v.01zM7 10.7c-2.59 0-4.7-2.11-4.7-4.7 0-2.59 2.11-4.7 4.7-4.7 2.59 0 4.7 2.11 4.7 4.7 0 2.59-2.11 4.7-4.7 4.7z"/></svg>
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318 </div>
|
|
|
319
|
|
|
320 <img class="avatar mr-2 flex-shrink-0 js-jump-to-suggestion-avatar d-none" alt="" aria-label="Team" src="" width="28" height="28">
|
|
|
321
|
|
|
322 <div class="jump-to-suggestion-name js-jump-to-suggestion-name flex-auto overflow-hidden text-left no-wrap css-truncate css-truncate-target">
|
|
|
323 </div>
|
|
|
324
|
|
|
325 <div class="border rounded-1 flex-shrink-0 bg-gray px-1 text-gray-light ml-1 f6 d-none js-jump-to-badge-search">
|
|
|
326 <span class="js-jump-to-badge-search-text-default d-none" aria-label="in this repository">
|
|
|
327 In this repository
|
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|
328 </span>
|
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|
329 <span class="js-jump-to-badge-search-text-global d-none" aria-label="in all of GitHub">
|
|
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330 All GitHub
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331 </span>
|
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|
332 <span aria-hidden="true" class="d-inline-block ml-1 v-align-middle">↵</span>
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333 </div>
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334
|
|
|
335 <div aria-hidden="true" class="border rounded-1 flex-shrink-0 bg-gray px-1 text-gray-light ml-1 f6 d-none d-on-nav-focus js-jump-to-badge-jump">
|
|
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336 Jump to
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|
|
337 <span class="d-inline-block ml-1 v-align-middle">↵</span>
|
|
|
338 </div>
|
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339 </a>
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340 </li>
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341
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|
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342
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343
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344 <li class="d-flex flex-justify-start flex-items-center p-0 f5 navigation-item js-navigation-item js-jump-to-global-search d-none" role="option">
|
|
|
345 <a tabindex="-1" class="no-underline d-flex flex-auto flex-items-center jump-to-suggestions-path js-jump-to-suggestion-path js-navigation-open p-2" href="">
|
|
|
346 <div class="jump-to-octicon js-jump-to-octicon flex-shrink-0 mr-2 text-center d-none">
|
|
|
347 <svg height="16" width="16" class="octicon octicon-repo flex-shrink-0 js-jump-to-octicon-repo d-none" title="Repository" aria-label="Repository" viewBox="0 0 12 16" version="1.1" role="img"><path fill-rule="evenodd" d="M4 9H3V8h1v1zm0-3H3v1h1V6zm0-2H3v1h1V4zm0-2H3v1h1V2zm8-1v12c0 .55-.45 1-1 1H6v2l-1.5-1.5L3 16v-2H1c-.55 0-1-.45-1-1V1c0-.55.45-1 1-1h10c.55 0 1 .45 1 1zm-1 10H1v2h2v-1h3v1h5v-2zm0-10H2v9h9V1z"/></svg>
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348 <svg height="16" width="16" class="octicon octicon-project flex-shrink-0 js-jump-to-octicon-project d-none" title="Project" aria-label="Project" viewBox="0 0 15 16" version="1.1" role="img"><path fill-rule="evenodd" d="M10 12h3V2h-3v10zm-4-2h3V2H6v8zm-4 4h3V2H2v12zm-1 1h13V1H1v14zM14 0H1a1 1 0 0 0-1 1v14a1 1 0 0 0 1 1h13a1 1 0 0 0 1-1V1a1 1 0 0 0-1-1z"/></svg>
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|
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349 <svg height="16" width="16" class="octicon octicon-search flex-shrink-0 js-jump-to-octicon-search d-none" title="Search" aria-label="Search" viewBox="0 0 16 16" version="1.1" role="img"><path fill-rule="evenodd" d="M15.7 13.3l-3.81-3.83A5.93 5.93 0 0 0 13 6c0-3.31-2.69-6-6-6S1 2.69 1 6s2.69 6 6 6c1.3 0 2.48-.41 3.47-1.11l3.83 3.81c.19.2.45.3.7.3.25 0 .52-.09.7-.3a.996.996 0 0 0 0-1.41v.01zM7 10.7c-2.59 0-4.7-2.11-4.7-4.7 0-2.59 2.11-4.7 4.7-4.7 2.59 0 4.7 2.11 4.7 4.7 0 2.59-2.11 4.7-4.7 4.7z"/></svg>
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350 </div>
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351
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352 <img class="avatar mr-2 flex-shrink-0 js-jump-to-suggestion-avatar d-none" alt="" aria-label="Team" src="" width="28" height="28">
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|
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353
|
|
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354 <div class="jump-to-suggestion-name js-jump-to-suggestion-name flex-auto overflow-hidden text-left no-wrap css-truncate css-truncate-target">
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|
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355 </div>
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|
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356
|
|
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357 <div class="border rounded-1 flex-shrink-0 bg-gray px-1 text-gray-light ml-1 f6 d-none js-jump-to-badge-search">
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358 <span class="js-jump-to-badge-search-text-default d-none" aria-label="in this repository">
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359 In this repository
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360 </span>
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361 <span class="js-jump-to-badge-search-text-global d-none" aria-label="in all of GitHub">
|
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362 All GitHub
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363 </span>
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364 <span aria-hidden="true" class="d-inline-block ml-1 v-align-middle">↵</span>
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365 </div>
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366
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367 <div aria-hidden="true" class="border rounded-1 flex-shrink-0 bg-gray px-1 text-gray-light ml-1 f6 d-none d-on-nav-focus js-jump-to-badge-jump">
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368 Jump to
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369 <span class="d-inline-block ml-1 v-align-middle">↵</span>
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370 </div>
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371 </a>
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372 </li>
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373
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374
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375 </ul>
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376
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377 </div>
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378 </label>
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379 </form> </div>
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380 </div>
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381
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382 </div>
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383
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384 <a class="HeaderMenu-link no-underline mr-3" data-hydro-click="{"event_type":"authentication.click","payload":{"location_in_page":"site header menu","repository_id":null,"auth_type":"LOG_IN","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="fd39d520055d8446e558ee9e8a4559fcf3c2707ff08aa36af3730909059570dd" data-ga-click="(Logged out) Header, clicked Sign in, text:sign-in" href="/login?return_to=%2Fhuster16%2Fgatk-tools">
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385 Sign in
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386 </a> <a class="HeaderMenu-link d-inline-block no-underline border border-gray-dark rounded-1 px-2 py-1" data-hydro-click="{"event_type":"authentication.click","payload":{"location_in_page":"site header menu","repository_id":null,"auth_type":"SIGN_UP","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="64c8aa9f44411d6847c02cf39127ae3a325a4d3950eccd853bc3d3d21f56be63" data-ga-click="(Logged out) Header, clicked Sign up, text:sign-up" href="/join">
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387 Sign up
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388 </a> </div>
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389 </div>
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390 </div>
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391 </header>
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392
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393 </div>
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394
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395 <div id="start-of-content" class="show-on-focus"></div>
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396
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397
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398 <div id="js-flash-container">
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399
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400 </div>
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401
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402
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403
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404 <div class="application-main " data-commit-hovercards-enabled>
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405 <div itemscope itemtype="http://schema.org/SoftwareSourceCode" class="">
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406 <main id="js-repo-pjax-container" data-pjax-container >
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407
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408
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409
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410
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411
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412
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413
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414
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415 <div class="pagehead repohead instapaper_ignore readability-menu experiment-repo-nav ">
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416 <div class="repohead-details-container clearfix container">
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417
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418 <ul class="pagehead-actions">
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419
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420
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421
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422
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423 <li>
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424
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425 <a class="tooltipped tooltipped-s btn btn-sm btn-with-count" aria-label="You must be signed in to watch a repository" rel="nofollow" data-hydro-click="{"event_type":"authentication.click","payload":{"location_in_page":"notification subscription menu watch","repository_id":null,"auth_type":"LOG_IN","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="dbd991e234ce46fc4f62b3bc77da0c3873ee09a32e84f05236c983f8ec38e576" href="/login?return_to=%2Fhuster16%2Fgatk-tools">
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426 <svg class="octicon octicon-eye v-align-text-bottom" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M8.06 2C3 2 0 8 0 8s3 6 8.06 6C13 14 16 8 16 8s-3-6-7.94-6zM8 12c-2.2 0-4-1.78-4-4 0-2.2 1.8-4 4-4 2.22 0 4 1.8 4 4 0 2.22-1.78 4-4 4zm2-4c0 1.11-.89 2-2 2-1.11 0-2-.89-2-2 0-1.11.89-2 2-2 1.11 0 2 .89 2 2z"/></svg>
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427 Watch
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428 </a> <a class="social-count" href="/huster16/gatk-tools/watchers"
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429 aria-label="0 users are watching this repository">
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430 0
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431 </a>
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432
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433 </li>
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434
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435 <li>
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436 <a class="btn btn-sm btn-with-count tooltipped tooltipped-s" aria-label="You must be signed in to star a repository" rel="nofollow" data-hydro-click="{"event_type":"authentication.click","payload":{"location_in_page":"star button","repository_id":189599350,"auth_type":"LOG_IN","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="7bed868485937510b69e0bc19d11023a5a1cc70d3d2d2036be837e66372ba7a0" href="/login?return_to=%2Fhuster16%2Fgatk-tools">
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437 <svg class="octicon octicon-star v-align-text-bottom" viewBox="0 0 14 16" version="1.1" width="14" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M14 6l-4.9-.64L7 1 4.9 5.36 0 6l3.6 3.26L2.67 14 7 11.67 11.33 14l-.93-4.74L14 6z"/></svg>
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438 Star
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439 </a>
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441 aria-label="0 users starred this repository">
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442 0
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444
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445 </li>
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446
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447 <li>
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448 <a class="btn btn-sm btn-with-count tooltipped tooltipped-s" aria-label="You must be signed in to fork a repository" rel="nofollow" data-hydro-click="{"event_type":"authentication.click","payload":{"location_in_page":"repo details fork button","repository_id":189599350,"auth_type":"LOG_IN","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="b471484d807715f3d9e3791444007693482a90517d741978272abdc02d7df366" href="/login?return_to=%2Fhuster16%2Fgatk-tools">
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449 <svg class="octicon octicon-repo-forked v-align-text-bottom" viewBox="0 0 10 16" version="1.1" width="10" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M8 1a1.993 1.993 0 0 0-1 3.72V6L5 8 3 6V4.72A1.993 1.993 0 0 0 2 1a1.993 1.993 0 0 0-1 3.72V6.5l3 3v1.78A1.993 1.993 0 0 0 5 15a1.993 1.993 0 0 0 1-3.72V9.5l3-3V4.72A1.993 1.993 0 0 0 8 1zM2 4.2C1.34 4.2.8 3.65.8 3c0-.65.55-1.2 1.2-1.2.65 0 1.2.55 1.2 1.2 0 .65-.55 1.2-1.2 1.2zm3 10c-.66 0-1.2-.55-1.2-1.2 0-.65.55-1.2 1.2-1.2.65 0 1.2.55 1.2 1.2 0 .65-.55 1.2-1.2 1.2zm3-10c-.66 0-1.2-.55-1.2-1.2 0-.65.55-1.2 1.2-1.2.65 0 1.2.55 1.2 1.2 0 .65-.55 1.2-1.2 1.2z"/></svg>
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450 Fork
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451 </a>
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454 0
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457 </ul>
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458
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459 <h1 class="public ">
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460 <svg class="octicon octicon-repo" viewBox="0 0 12 16" version="1.1" width="12" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M4 9H3V8h1v1zm0-3H3v1h1V6zm0-2H3v1h1V4zm0-2H3v1h1V2zm8-1v12c0 .55-.45 1-1 1H6v2l-1.5-1.5L3 16v-2H1c-.55 0-1-.45-1-1V1c0-.55.45-1 1-1h10c.55 0 1 .45 1 1zm-1 10H1v2h2v-1h3v1h5v-2zm0-10H2v9h9V1z"/></svg>
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461 <span class="author" itemprop="author"><a class="url fn" rel="author" data-hovercard-type="user" data-hovercard-url="/hovercards?user_id=50308301" data-octo-click="hovercard-link-click" data-octo-dimensions="link_type:self" href="/huster16">huster16</a></span><!--
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462 --><span class="path-divider">/</span><!--
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463 --><strong itemprop="name"><a data-pjax="#js-repo-pjax-container" href="/huster16/gatk-tools">gatk-tools</a></strong>
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464
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466 </h1>
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467
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468 </div>
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469
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470 <nav class="hx_reponav reponav js-repo-nav js-sidenav-container-pjax container"
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471 itemscope
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472 itemtype="http://schema.org/BreadcrumbList"
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474 data-pjax="#js-repo-pjax-container">
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475
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476 <span itemscope itemtype="http://schema.org/ListItem" itemprop="itemListElement">
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477 <a class="js-selected-navigation-item selected reponav-item" itemprop="url" data-hotkey="g c" aria-current="page" data-selected-links="repo_source repo_downloads repo_commits repo_releases repo_tags repo_branches repo_packages /huster16/gatk-tools" href="/huster16/gatk-tools">
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478 <svg class="octicon octicon-code" viewBox="0 0 14 16" version="1.1" width="14" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M9.5 3L8 4.5 11.5 8 8 11.5 9.5 13 14 8 9.5 3zm-5 0L0 8l4.5 5L6 11.5 2.5 8 6 4.5 4.5 3z"/></svg>
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479 <span itemprop="name">Code</span>
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480 <meta itemprop="position" content="1">
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481 </a> </span>
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482
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483 <span itemscope itemtype="http://schema.org/ListItem" itemprop="itemListElement">
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484 <a itemprop="url" data-hotkey="g i" class="js-selected-navigation-item reponav-item" data-selected-links="repo_issues repo_labels repo_milestones /huster16/gatk-tools/issues" href="/huster16/gatk-tools/issues">
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485 <svg class="octicon octicon-issue-opened" viewBox="0 0 14 16" version="1.1" width="14" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M7 2.3c3.14 0 5.7 2.56 5.7 5.7s-2.56 5.7-5.7 5.7A5.71 5.71 0 0 1 1.3 8c0-3.14 2.56-5.7 5.7-5.7zM7 1C3.14 1 0 4.14 0 8s3.14 7 7 7 7-3.14 7-7-3.14-7-7-7zm1 3H6v5h2V4zm0 6H6v2h2v-2z"/></svg>
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486 <span itemprop="name">Issues</span>
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487 <span class="Counter">0</span>
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488 <meta itemprop="position" content="2">
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489 </a> </span>
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490
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491 <span itemscope itemtype="http://schema.org/ListItem" itemprop="itemListElement">
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492 <a data-hotkey="g p" itemprop="url" class="js-selected-navigation-item reponav-item" data-selected-links="repo_pulls checks /huster16/gatk-tools/pulls" href="/huster16/gatk-tools/pulls">
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493 <svg class="octicon octicon-git-pull-request" viewBox="0 0 12 16" version="1.1" width="12" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M11 11.28V5c-.03-.78-.34-1.47-.94-2.06C9.46 2.35 8.78 2.03 8 2H7V0L4 3l3 3V4h1c.27.02.48.11.69.31.21.2.3.42.31.69v6.28A1.993 1.993 0 0 0 10 15a1.993 1.993 0 0 0 1-3.72zm-1 2.92c-.66 0-1.2-.55-1.2-1.2 0-.65.55-1.2 1.2-1.2.65 0 1.2.55 1.2 1.2 0 .65-.55 1.2-1.2 1.2zM4 3c0-1.11-.89-2-2-2a1.993 1.993 0 0 0-1 3.72v6.56A1.993 1.993 0 0 0 2 15a1.993 1.993 0 0 0 1-3.72V4.72c.59-.34 1-.98 1-1.72zm-.8 10c0 .66-.55 1.2-1.2 1.2-.65 0-1.2-.55-1.2-1.2 0-.65.55-1.2 1.2-1.2.65 0 1.2.55 1.2 1.2zM2 4.2C1.34 4.2.8 3.65.8 3c0-.65.55-1.2 1.2-1.2.65 0 1.2.55 1.2 1.2 0 .65-.55 1.2-1.2 1.2z"/></svg>
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494 <span itemprop="name">Pull requests</span>
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495 <span class="Counter">0</span>
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496 <meta itemprop="position" content="3">
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497 </a> </span>
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498
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499
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500 <a data-hotkey="g b" class="js-selected-navigation-item reponav-item" data-selected-links="repo_projects new_repo_project repo_project /huster16/gatk-tools/projects" href="/huster16/gatk-tools/projects">
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501 <svg class="octicon octicon-project" viewBox="0 0 15 16" version="1.1" width="15" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M10 12h3V2h-3v10zm-4-2h3V2H6v8zm-4 4h3V2H2v12zm-1 1h13V1H1v14zM14 0H1a1 1 0 0 0-1 1v14a1 1 0 0 0 1 1h13a1 1 0 0 0 1-1V1a1 1 0 0 0-1-1z"/></svg>
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502 Projects
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503 <span class="Counter" >0</span>
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504 </a>
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505
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506
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507 <a data-skip-pjax="true" class="js-selected-navigation-item reponav-item" data-selected-links="security alerts policy /huster16/gatk-tools/security/advisories" href="/huster16/gatk-tools/security/advisories">
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508 <svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 16 16" class="octicon" height="16px" width="16px">
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510 <path d="M3 3.5L8 2v12c-1.207 0-5-2.482-5-5.985V3.5z"></path>
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511 </svg>
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512
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513 Security
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514 </a>
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515 <a class="js-selected-navigation-item reponav-item" data-selected-links="repo_graphs repo_contributors dependency_graph pulse people /huster16/gatk-tools/pulse" href="/huster16/gatk-tools/pulse">
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516 <svg class="octicon octicon-graph" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M16 14v1H0V0h1v14h15zM5 13H3V8h2v5zm4 0H7V3h2v10zm4 0h-2V6h2v7z"/></svg>
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517 Insights
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518 </a>
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519
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520 </nav>
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521
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522
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523 </div>
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524 <div class="container new-discussion-timeline experiment-repo-nav ">
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525 <div class="repository-content ">
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526
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527
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528
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529 <div class="signup-prompt-bg rounded-1">
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530 <div class="signup-prompt p-4 text-center mb-4 rounded-1">
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531 <div class="position-relative">
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532 <!-- '"` --><!-- </textarea></xmp> --></option></form><form action="/prompt_dismissals/signup" accept-charset="UTF-8" method="post"><input name="utf8" type="hidden" value="✓" /><input type="hidden" name="_method" value="put" /><input type="hidden" name="authenticity_token" value="C347xA/wfN9S1Brf3jkG7GCKplNmZoFerGeOImNxa8PZNsinckqKBCSoP2KYkwLIig6M6En5RG5kpxHsZ8OJYQ==" />
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533 <button type="submit" class="position-absolute top-0 right-0 btn-link link-gray" data-ga-click="(Logged out) Sign up prompt, clicked Dismiss, text:dismiss">
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534 Dismiss
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535 </button>
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536 </form> <h3 class="pt-2">Join GitHub today</h3>
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537 <p class="col-6 mx-auto">GitHub is home to over 36 million developers working together to host and review code, manage projects, and build software together.</p>
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538 <a class="btn btn-primary" data-hydro-click="{"event_type":"authentication.click","payload":{"location_in_page":"files signup prompt","repository_id":null,"auth_type":"SIGN_UP","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="eeb4f110f9edd5a734bf991fd9dfa730510b25158f8871a8f3270dc219a0e7bc" data-ga-click="(Logged out) Sign up prompt, clicked Sign up, text:sign-up" href="/join?source=prompt-code">Sign up</a>
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539 </div>
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540 </div>
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541 </div>
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542
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543
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544
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545 <div class="d-flex flex-items-start">
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546 <div class="flex-auto mb-3"> <div class="f4">
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547 <em class="d-block text-gray">
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548 No description, website, or topics provided.
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549 </em>
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550 </div>
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551 </div>
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552 </div>
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553
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554
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555
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556
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557 <div class="overall-summary overall-summary-bottomless">
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558 <div class="stats-switcher-viewport js-stats-switcher-viewport">
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559 <div class="stats-switcher-wrapper">
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560 <ul class="numbers-summary">
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561 <li class="commits">
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562 <a data-pjax href="/huster16/gatk-tools/commits/master">
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563 <svg class="octicon octicon-history" viewBox="0 0 14 16" version="1.1" width="14" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M8 13H6V6h5v2H8v5zM7 1C4.81 1 2.87 2.02 1.59 3.59L0 2v4h4L2.5 4.5C3.55 3.17 5.17 2.3 7 2.3c3.14 0 5.7 2.56 5.7 5.7s-2.56 5.7-5.7 5.7A5.71 5.71 0 0 1 1.3 8c0-.34.03-.67.09-1H.08C.03 7.33 0 7.66 0 8c0 3.86 3.14 7 7 7s7-3.14 7-7-3.14-7-7-7z"/></svg>
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564 <span class="num text-emphasized">
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565 4
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566 </span>
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567 commits
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568 </a>
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569 </li>
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570 <li>
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571 <a data-pjax href="/huster16/gatk-tools/branches">
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572 <svg class="octicon octicon-git-branch" viewBox="0 0 10 16" version="1.1" width="10" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M10 5c0-1.11-.89-2-2-2a1.993 1.993 0 0 0-1 3.72v.3c-.02.52-.23.98-.63 1.38-.4.4-.86.61-1.38.63-.83.02-1.48.16-2 .45V4.72a1.993 1.993 0 0 0-1-3.72C.88 1 0 1.89 0 3a2 2 0 0 0 1 1.72v6.56c-.59.35-1 .99-1 1.72 0 1.11.89 2 2 2 1.11 0 2-.89 2-2 0-.53-.2-1-.53-1.36.09-.06.48-.41.59-.47.25-.11.56-.17.94-.17 1.05-.05 1.95-.45 2.75-1.25S8.95 7.77 9 6.73h-.02C9.59 6.37 10 5.73 10 5zM2 1.8c.66 0 1.2.55 1.2 1.2 0 .65-.55 1.2-1.2 1.2C1.35 4.2.8 3.65.8 3c0-.65.55-1.2 1.2-1.2zm0 12.41c-.66 0-1.2-.55-1.2-1.2 0-.65.55-1.2 1.2-1.2.65 0 1.2.55 1.2 1.2 0 .65-.55 1.2-1.2 1.2zm6-8c-.66 0-1.2-.55-1.2-1.2 0-.65.55-1.2 1.2-1.2.65 0 1.2.55 1.2 1.2 0 .65-.55 1.2-1.2 1.2z"/></svg>
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573 <span class="num text-emphasized">
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574 1
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575 </span>
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576 branch
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577 </a>
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578 </li>
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579
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580 <li>
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581 <a href="/huster16/gatk-tools/releases">
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582 <svg class="octicon octicon-tag" viewBox="0 0 14 16" version="1.1" width="14" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M7.73 1.73C7.26 1.26 6.62 1 5.96 1H3.5C2.13 1 1 2.13 1 3.5v2.47c0 .66.27 1.3.73 1.77l6.06 6.06c.39.39 1.02.39 1.41 0l4.59-4.59a.996.996 0 0 0 0-1.41L7.73 1.73zM2.38 7.09c-.31-.3-.47-.7-.47-1.13V3.5c0-.88.72-1.59 1.59-1.59h2.47c.42 0 .83.16 1.13.47l6.14 6.13-4.73 4.73-6.13-6.15zM3.01 3h2v2H3V3h.01z"/></svg>
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583 <span class="num text-emphasized">
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584 0
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585 </span>
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586 releases
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587 </a>
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588 </li>
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589
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590
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591 <li >
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592 <include-fragment src="/huster16/gatk-tools/contributors_size">
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593 <a href="/huster16/gatk-tools/graphs/contributors">
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594 <svg class="octicon octicon-organization" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M16 12.999c0 .439-.45 1-1 1H7.995c-.539 0-.994-.447-.995-.999H1c-.54 0-1-.561-1-1 0-2.634 3-4 3-4s.229-.409 0-1c-.841-.621-1.058-.59-1-3 .058-2.419 1.367-3 2.5-3s2.442.58 2.5 3c.058 2.41-.159 2.379-1 3-.229.59 0 1 0 1s1.549.711 2.42 2.088C9.196 9.369 10 8.999 10 8.999s.229-.409 0-1c-.841-.62-1.058-.59-1-3 .058-2.419 1.367-3 2.5-3s2.437.581 2.495 3c.059 2.41-.158 2.38-1 3-.229.59 0 1 0 1s3.005 1.366 3.005 4z"/></svg>
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595 <span class="num text-emphasized"></span>
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596 Fetching contributors
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597 </a>
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598 </include-fragment> </li>
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599
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600 <li>
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601 <a href="/huster16/gatk-tools/blob/master/LICENSE">
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602 <svg class="octicon octicon-law" viewBox="0 0 14 16" version="1.1" width="14" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M7 4c-.83 0-1.5-.67-1.5-1.5S6.17 1 7 1s1.5.67 1.5 1.5S7.83 4 7 4zm7 6c0 1.11-.89 2-2 2h-1c-1.11 0-2-.89-2-2l2-4h-1c-.55 0-1-.45-1-1H8v8c.42 0 1 .45 1 1h1c.42 0 1 .45 1 1H3c0-.55.58-1 1-1h1c0-.55.58-1 1-1h.03L6 5H5c0 .55-.45 1-1 1H3l2 4c0 1.11-.89 2-2 2H2c-1.11 0-2-.89-2-2l2-4H1V5h3c0-.55.45-1 1-1h4c.55 0 1 .45 1 1h3v1h-1l2 4zM2.5 7L1 10h3L2.5 7zM13 10l-1.5-3-1.5 3h3z"/></svg>
|
|
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603 Apache-2.0
|
|
|
604 </a>
|
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|
605 </li>
|
|
|
606 </ul>
|
|
|
607
|
|
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608 <div class="repository-lang-stats">
|
|
|
609 <ol class="repository-lang-stats-numbers">
|
|
|
610 <li>
|
|
|
611 <a href="/huster16/gatk-tools/search?l=xslt" data-ga-click="Repository, language stats search click, location:repo overview">
|
|
|
612 <span class="color-block language-color" style="background-color:#EB8CEB;"></span>
|
|
|
613 <span class="lang">XSLT</span>
|
|
|
614 <span class="percent">75.2%</span>
|
|
|
615 </a>
|
|
|
616 </li>
|
|
|
617 <li>
|
|
|
618 <a href="/huster16/gatk-tools/search?l=python" data-ga-click="Repository, language stats search click, location:repo overview">
|
|
|
619 <span class="color-block language-color" style="background-color:#3572A5;"></span>
|
|
|
620 <span class="lang">Python</span>
|
|
|
621 <span class="percent">24.8%</span>
|
|
|
622 </a>
|
|
|
623 </li>
|
|
|
624 </ol>
|
|
|
625 </div>
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626 </div>
|
|
|
627 </div>
|
|
|
628 </div>
|
|
|
629
|
|
|
630 <button type="button" class="d-flex p-0 repository-lang-stats-graph js-toggle-lang-stats" title="Click for language details" data-ga-click="Repository, language bar stats toggle, location:repo overview">
|
|
|
631 <span class="language-color" aria-label="XSLT 75.2%" style="width:75.2%; background-color:#EB8CEB;" itemprop="keywords">XSLT</span>
|
|
|
632 <span class="language-color" aria-label="Python 24.8%" style="width:24.8%; background-color:#3572A5;" itemprop="keywords">Python</span>
|
|
|
633 </button>
|
|
|
634
|
|
|
635
|
|
|
636
|
|
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637
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638
|
|
|
639
|
|
|
640 <div class="file-navigation in-mid-page d-flex flex-items-start">
|
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|
641
|
|
|
642 <details class="details-reset details-overlay select-menu branch-select-menu hx_rsm" id="branch-select-menu">
|
|
|
643 <summary class="btn btn-sm select-menu-button css-truncate"
|
|
|
644 data-hotkey="w"
|
|
|
645
|
|
|
646 title="Switch branches or tags">
|
|
|
647 <i>Branch:</i>
|
|
|
648 <span class="css-truncate-target">master</span>
|
|
|
649 </summary>
|
|
|
650
|
|
|
651 <details-menu class="select-menu-modal hx_rsm-modal position-absolute" style="z-index: 99;" src="/huster16/gatk-tools/ref-list/master?source_action=disambiguate&source_controller=files" preload>
|
|
|
652 <include-fragment class="select-menu-loading-overlay anim-pulse">
|
|
|
653 <svg height="32" class="octicon octicon-octoface" viewBox="0 0 16 16" version="1.1" width="32" aria-hidden="true"><path fill-rule="evenodd" d="M14.7 5.34c.13-.32.55-1.59-.13-3.31 0 0-1.05-.33-3.44 1.3-1-.28-2.07-.32-3.13-.32s-2.13.04-3.13.32c-2.39-1.64-3.44-1.3-3.44-1.3-.68 1.72-.26 2.99-.13 3.31C.49 6.21 0 7.33 0 8.69 0 13.84 3.33 15 7.98 15S16 13.84 16 8.69c0-1.36-.49-2.48-1.3-3.35zM8 14.02c-3.3 0-5.98-.15-5.98-3.35 0-.76.38-1.48 1.02-2.07 1.07-.98 2.9-.46 4.96-.46 2.07 0 3.88-.52 4.96.46.65.59 1.02 1.3 1.02 2.07 0 3.19-2.68 3.35-5.98 3.35zM5.49 9.01c-.66 0-1.2.8-1.2 1.78s.54 1.79 1.2 1.79c.66 0 1.2-.8 1.2-1.79s-.54-1.78-1.2-1.78zm5.02 0c-.66 0-1.2.79-1.2 1.78s.54 1.79 1.2 1.79c.66 0 1.2-.8 1.2-1.79s-.53-1.78-1.2-1.78z"/></svg>
|
|
|
654 </include-fragment>
|
|
|
655 </details-menu>
|
|
|
656 </details>
|
|
|
657
|
|
|
658
|
|
|
659 <button type="button" class="btn btn-sm disabled tooltipped tooltipped-n new-pull-request-btn" aria-label="You must be signed in to create a pull request">
|
|
|
660 New pull request
|
|
|
661 </button>
|
|
|
662
|
|
|
663 <div class="breadcrumb flex-auto">
|
|
|
664
|
|
|
665 </div>
|
|
|
666
|
|
|
667 <div class="BtnGroup">
|
|
|
668
|
|
|
669 <a class="btn btn-sm empty-icon float-right BtnGroup-item" data-hydro-click="{"event_type":"repository.click","payload":{"target":"FIND_FILE_BUTTON","repository_id":189599350,"client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="2202b3ffe5544f8163f8b93af3713fc7029c4f471879a84fe8f338309f52faab" data-ga-click="Repository, find file, location:repo overview" data-hotkey="t" data-pjax="true" href="/huster16/gatk-tools/find/master">Find File</a>
|
|
|
670 </div>
|
|
|
671
|
|
|
672
|
|
|
673
|
|
|
674
|
|
|
675 <details class="get-repo-select-menu js-get-repo-select-menu js-anon-get-repo-select-menu position-relative details-overlay details-reset">
|
|
|
676 <summary class="btn btn-sm ml-2 btn-primary" data-hydro-click="{"event_type":"repository.click","payload":{"repository_id":189599350,"target":"CLONE_OR_DOWNLOAD_BUTTON","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="4525d521fa4701080dc4256fee3f654f20406206ba9f433f0e4d0b3ce8e26964">
|
|
|
677 Clone or download
|
|
|
678 <span class="dropdown-caret"></span>
|
|
|
679 </summary> <div class="position-relative">
|
|
|
680 <div class="get-repo-modal dropdown-menu dropdown-menu-sw pb-0 js-toggler-container js-get-repo-modal">
|
|
|
681
|
|
|
682 <div class="get-repo-modal-options">
|
|
|
683 <div class="clone-options https-clone-options">
|
|
|
684
|
|
|
685 <h4 class="mb-1">
|
|
|
686 Clone with HTTPS
|
|
|
687 <a class="muted-link" href="https://help.github.com/articles/which-remote-url-should-i-use" target="_blank" title="Which remote URL should I use?">
|
|
|
688 <svg class="octicon octicon-question" viewBox="0 0 14 16" version="1.1" width="14" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M6 10h2v2H6v-2zm4-3.5C10 8.64 8 9 8 9H6c0-.55.45-1 1-1h.5c.28 0 .5-.22.5-.5v-1c0-.28-.22-.5-.5-.5h-1c-.28 0-.5.22-.5.5V7H4c0-1.5 1.5-3 3-3s3 1 3 2.5zM7 2.3c3.14 0 5.7 2.56 5.7 5.7s-2.56 5.7-5.7 5.7A5.71 5.71 0 0 1 1.3 8c0-3.14 2.56-5.7 5.7-5.7zM7 1C3.14 1 0 4.14 0 8s3.14 7 7 7 7-3.14 7-7-3.14-7-7-7z"/></svg>
|
|
|
689 </a>
|
|
|
690 </h4>
|
|
|
691 <p class="mb-2 get-repo-decription-text">
|
|
|
692 Use Git or checkout with SVN using the web URL.
|
|
|
693 </p>
|
|
|
694
|
|
|
695 <div class="input-group">
|
|
|
696 <input type="text" class="form-control input-monospace input-sm" data-autoselect value="https://github.com/huster16/gatk-tools.git" aria-label="Clone this repository at https://github.com/huster16/gatk-tools.git" readonly>
|
|
|
697 <div class="input-group-button">
|
|
|
698 <clipboard-copy value="https://github.com/huster16/gatk-tools.git" aria-label="Copy to clipboard" class="btn btn-sm" data-hydro-click="{"event_type":"clone_or_download.click","payload":{"feature_clicked":"COPY_URL","git_repository_type":"REPOSITORY","repository_id":189599350,"client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="11678c39c42eee5608601cea62776722ddc19e672194910a3f7e339e0c1dd6e6"><svg class="octicon octicon-clippy" viewBox="0 0 14 16" version="1.1" width="14" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M2 13h4v1H2v-1zm5-6H2v1h5V7zm2 3V8l-3 3 3 3v-2h5v-2H9zM4.5 9H2v1h2.5V9zM2 12h2.5v-1H2v1zm9 1h1v2c-.02.28-.11.52-.3.7-.19.18-.42.28-.7.3H1c-.55 0-1-.45-1-1V4c0-.55.45-1 1-1h3c0-1.11.89-2 2-2 1.11 0 2 .89 2 2h3c.55 0 1 .45 1 1v5h-1V6H1v9h10v-2zM2 5h8c0-.55-.45-1-1-1H8c-.55 0-1-.45-1-1s-.45-1-1-1-1 .45-1 1-.45 1-1 1H3c-.55 0-1 .45-1 1z"/></svg></clipboard-copy>
|
|
|
699 </div>
|
|
|
700 </div>
|
|
|
701
|
|
|
702 </div>
|
|
|
703
|
|
|
704 <div class="mt-2">
|
|
|
705
|
|
|
706 <a class="btn btn-outline get-repo-btn js-anon-download-zip-link " rel="nofollow" data-hydro-click="{"event_type":"clone_or_download.click","payload":{"feature_clicked":"DOWNLOAD_ZIP","git_repository_type":"REPOSITORY","repository_id":189599350,"client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="f38afae5eed2525a512560364e73cf9629a62f093e6936acc841e643eb1f6dc8" data-ga-click="Repository, download zip, location:repo overview" href="/huster16/gatk-tools/archive/master.zip">Download ZIP</a>
|
|
|
707
|
|
|
708 </div>
|
|
|
709 </div>
|
|
|
710
|
|
|
711 <div class="js-modal-downloading" hidden>
|
|
|
712 <div class="py-2 px-3">
|
|
|
713 <h4 class="lh-condensed mb-3">Downloading<span class="animated-ellipsis-container"><span class="animated-ellipsis">...</span></span></h4>
|
|
|
714 <p class="text-gray">
|
|
|
715 Want to be notified of new releases in
|
|
|
716 <span class="text-bold">huster16/gatk-tools</span>?
|
|
|
717 </p>
|
|
|
718 </div>
|
|
|
719 <div class="width-full d-flex">
|
|
|
720 <a rel="nofollow" class="get-repo-btn btn btn-outline" style="width: 50%" data-hydro-click="{"event_type":"authentication.click","payload":{"location_in_page":"download popover","repository_id":189599350,"auth_type":"LOG_IN","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="cb61463cc7655c64c1c248161ce77d7b3d3c314ea70146f402f8c7d75b0680e3" href="/login?return_to=https%3A%2F%2Fgithub.com%2Fhuster16%2Fgatk-tools">Sign in</a>
|
|
|
721 <a rel="nofollow" class="get-repo-btn btn btn-primary" style="width: 50%" data-hydro-click="{"event_type":"authentication.click","payload":{"location_in_page":"download popover","repository_id":189599350,"auth_type":"SIGN_UP","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="4de2cd77e5bd2d2867a7b2d5a861644713963b0a7cf6f57303dd2946291b114e" href="/join?return_to=%2Fhuster16%2Fgatk-tools">Sign up</a>
|
|
|
722 </div>
|
|
|
723 </div>
|
|
|
724
|
|
|
725 <div class="js-modal-download-mac py-2 px-3 d-none">
|
|
|
726 <h4 class="lh-condensed mb-3">Launching GitHub Desktop<span class="animated-ellipsis-container"><span class="animated-ellipsis">...</span></span></h4>
|
|
|
727 <p class="text-gray">If nothing happens, <a href="https://desktop.github.com/">download GitHub Desktop</a> and try again.</p>
|
|
|
728 <p><button class="btn-link js-get-repo-modal-download-back">Go back</button></p>
|
|
|
729 </div>
|
|
|
730
|
|
|
731 <div class="js-modal-download-windows py-2 px-3 d-none">
|
|
|
732 <h4 class="lh-condensed mb-3">Launching GitHub Desktop<span class="animated-ellipsis-container"><span class="animated-ellipsis">...</span></span></h4>
|
|
|
733 <p class="text-gray">If nothing happens, <a href="https://desktop.github.com/">download GitHub Desktop</a> and try again.</p>
|
|
|
734 <p><button class="btn-link js-get-repo-modal-download-back">Go back</button></p>
|
|
|
735 </div>
|
|
|
736
|
|
|
737 <div class="js-modal-download-xcode py-2 px-3 d-none">
|
|
|
738 <h4 class="lh-condensed mb-3">Launching Xcode<span class="animated-ellipsis-container"><span class="animated-ellipsis">...</span></span></h4>
|
|
|
739 <p class="text-gray">If nothing happens, <a href="https://developer.apple.com/xcode/">download Xcode</a> and try again.</p>
|
|
|
740 <p><button class="btn-link js-get-repo-modal-download-back">Go back</button></p>
|
|
|
741 </div>
|
|
|
742
|
|
|
743 <div class="js-modal-download-visual-studio py-2 px-3 d-none">
|
|
|
744 <h4 class="lh-condensed mb-3">Launching Visual Studio<span class="animated-ellipsis-container"><span class="animated-ellipsis">...</span></span></h4>
|
|
|
745 <p class="text-gray">If nothing happens, <a href="https://visualstudio.github.com/">download the GitHub extension for Visual Studio</a> and try again.</p>
|
|
|
746 <p><button class="btn-link js-get-repo-modal-download-back">Go back</button></p>
|
|
|
747 </div>
|
|
|
748
|
|
|
749 </div>
|
|
|
750 </div>
|
|
|
751 </details>
|
|
|
752
|
|
|
753 </div>
|
|
|
754
|
|
|
755
|
|
|
756
|
|
|
757
|
|
|
758 <include-fragment src="/huster16/gatk-tools/tree-commit/8396208ba320ef1f0cd4b6b02607a2d2aae5f760" class="commit-tease commit-loader">
|
|
|
759 <div class="blank loader-loading">
|
|
|
760 <img alt="" class="loader" src="https://github.githubassets.com/images/spinners/octocat-spinner-32-EAF2F5.gif" width="16" height="16" />
|
|
|
761 Fetching latest commit…
|
|
|
762 </div>
|
|
|
763 <div class="loader-error">
|
|
|
764 Cannot retrieve the latest commit at this time.
|
|
|
765 </div>
|
|
|
766 </include-fragment>
|
|
|
767
|
|
|
768
|
|
|
769 <include-fragment class="file-wrap" src="/huster16/gatk-tools/file-list/master">
|
|
|
770 <a class="d-none js-permalink-shortcut" data-hotkey="y" href="/huster16/gatk-tools/tree/8396208ba320ef1f0cd4b6b02607a2d2aae5f760">Permalink</a>
|
|
|
771
|
|
|
772 <table class="files js-navigation-container js-active-navigation-container" data-pjax>
|
|
|
773 <thead>
|
|
|
774 <tr>
|
|
|
775 <th><span class="sr-only">Type</span></th>
|
|
|
776 <th><span class="sr-only">Name</span></th>
|
|
|
777 <th><span class="sr-only">Latest commit message</span></th>
|
|
|
778 <th><span class="sr-only">Commit time</span></th>
|
|
|
779 </tr>
|
|
|
780 </thead>
|
|
|
781
|
|
|
782
|
|
|
783 <tbody>
|
|
|
784 <tr class="warning include-fragment-error">
|
|
|
785 <td class="icon"><svg class="octicon octicon-alert" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M8.893 1.5c-.183-.31-.52-.5-.887-.5s-.703.19-.886.5L.138 13.499a.98.98 0 0 0 0 1.001c.193.31.53.501.886.501h13.964c.367 0 .704-.19.877-.5a1.03 1.03 0 0 0 .01-1.002L8.893 1.5zm.133 11.497H6.987v-2.003h2.039v2.003zm0-3.004H6.987V5.987h2.039v4.006z"/></svg></td>
|
|
|
786 <td class="content" colspan="3">Failed to load latest commit information.</td>
|
|
|
787 </tr>
|
|
|
788
|
|
|
789 <tr class="js-navigation-item">
|
|
|
790 <td class="icon">
|
|
|
791 <svg aria-label="directory" class="octicon octicon-file-directory" viewBox="0 0 14 16" version="1.1" width="14" height="16" role="img"><path fill-rule="evenodd" d="M13 4H7V3c0-.66-.31-1-1-1H1c-.55 0-1 .45-1 1v10c0 .55.45 1 1 1h12c.55 0 1-.45 1-1V5c0-.55-.45-1-1-1zM6 4H1V3h5v1z"/></svg>
|
|
|
792 <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" />
|
|
|
793 </td>
|
|
|
794 <td class="content">
|
|
|
795 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="generation" id="9cb9ce5bd9e807867d42a740c9633fc7-3625a25873af83c0541afd8f95fc07be91aabe3a" href="/huster16/gatk-tools/tree/master/generation">generation</a></span>
|
|
|
796 </td>
|
|
|
797 <td class="message">
|
|
|
798 <span class="css-truncate css-truncate-target">
|
|
|
799 </span>
|
|
|
800 </td>
|
|
|
801 <td class="age">
|
|
|
802 <span class="css-truncate css-truncate-target"></span>
|
|
|
803 </td>
|
|
|
804 </tr>
|
|
|
805 <tr class="js-navigation-item">
|
|
|
806 <td class="icon">
|
|
|
807 <svg aria-label="directory" class="octicon octicon-file-directory" viewBox="0 0 14 16" version="1.1" width="14" height="16" role="img"><path fill-rule="evenodd" d="M13 4H7V3c0-.66-.31-1-1-1H1c-.55 0-1 .45-1 1v10c0 .55.45 1 1 1h12c.55 0 1-.45 1-1V5c0-.55-.45-1-1-1zM6 4H1V3h5v1z"/></svg>
|
|
|
808 <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" />
|
|
|
809 </td>
|
|
|
810 <td class="content">
|
|
|
811 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="tool-data" id="cacc76c3f8e5d46af3e9a108d7a64298-a54d24bc89b721726d1816c1d84b612e87530b2c" href="/huster16/gatk-tools/tree/master/tool-data">tool-data</a></span>
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812 </td>
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824 <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" />
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825 </td>
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827 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title=".shed.yml" id="cdcc89357908fc034bde629890b000b5-2325e6cb39480ba78f39c79f6c003dbd1e31d57f" href="/huster16/gatk-tools/blob/master/.shed.yml">.shed.yml</a></span>
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828 </td>
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841 </td>
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843 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="LICENSE" id="9879d6db96fd29134fc802214163b95a-261eeb9e9f8b2b4b0d119366dda99c6fd7d35c64" itemprop="license" href="/huster16/gatk-tools/blob/master/LICENSE">LICENSE</a></span>
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844 </td>
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855 <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg>
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857 </td>
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859 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="README" id="c47c7c7383225ab55ff591cb59c41e6b-a8addefe468edbe7d68593ece5e8aa412b4899ff" href="/huster16/gatk-tools/blob/master/README">README</a></span>
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860 </td>
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861 <td class="message">
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871 <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg>
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873 </td>
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874 <td class="content">
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875 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="analyze_covariates.xml" id="59610722be95a0212262688dcbf7c239-2e2bbaf59e3a3ca897dbc81ce2bd795b9d42325f" href="/huster16/gatk-tools/blob/master/analyze_covariates.xml">analyze_covariates.xml</a></span>
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889 </td>
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890 <td class="content">
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891 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="base_recalibrator.xml" id="48bdf74141faebe19e0066be8cd87dd5-7317df4b6cf2302f9127fd576bc4ae33f4492009" href="/huster16/gatk-tools/blob/master/base_recalibrator.xml">base_recalibrator.xml</a></span>
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901 <tr class="js-navigation-item">
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902 <td class="icon">
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904 <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" />
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905 </td>
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906 <td class="content">
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907 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="combine_gvcfs.xml" id="5a42bf8ebd8f0473dfab105bce4454bd-8f5dab6ecfcf6eecdc49559973a0f517c7ce51fe" href="/huster16/gatk-tools/blob/master/combine_gvcfs.xml">combine_gvcfs.xml</a></span>
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916 </tr>
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917 <tr class="js-navigation-item">
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918 <td class="icon">
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921 </td>
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922 <td class="content">
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923 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="combine_variants.xml" id="27122924aa0d6acdcda3d1a0fdd0ca79-9f7532b3fd7b7bc45137cdb66ad4deadbf2637be" href="/huster16/gatk-tools/blob/master/combine_variants.xml">combine_variants.xml</a></span>
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924 </td>
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936 <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" />
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937 </td>
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938 <td class="content">
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939 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="gatk.xml" id="6aeaf5662a51985b4f74c250a5ccefa2-715530fdb731605326741b7f0e5da00bfaea2c70" href="/huster16/gatk-tools/blob/master/gatk.xml">gatk.xml</a></span>
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940 </td>
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951 <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg>
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952 <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" />
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953 </td>
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954 <td class="content">
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955 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="gatk_macros.xml" id="e86fbc71297931c373dc3c1ebbc5aa9b-0edfc715939f63ad66fd7e4555ecac6bc3623748" href="/huster16/gatk-tools/blob/master/gatk_macros.xml">gatk_macros.xml</a></span>
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956 </td>
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964 </tr>
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965 <tr class="js-navigation-item">
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966 <td class="icon">
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967 <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg>
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968 <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" />
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969 </td>
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970 <td class="content">
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971 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="genotype_gvcfs.xml" id="0372ebae7a90c232ee5e7536d5fc3d71-18e615ecb169da998a8246b66159d1c6819ef222" href="/huster16/gatk-tools/blob/master/genotype_gvcfs.xml">genotype_gvcfs.xml</a></span>
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972 </td>
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981 <tr class="js-navigation-item">
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982 <td class="icon">
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983 <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg>
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984 <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" />
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985 </td>
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986 <td class="content">
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987 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="haplotype_caller.xml" id="3ba21ca32b06283a30eaa19f3d2aacb7-0fddf817930f1bfbd2c286514af781a06edf1fe0" href="/huster16/gatk-tools/blob/master/haplotype_caller.xml">haplotype_caller.xml</a></span>
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988 </td>
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998 <td class="icon">
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999 <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg>
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1001 </td>
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1003 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="indel_realigner.xml" id="e7b986d614bb6b302bf2fc4aa93817d0-6c46b5cf10b2b57e641689d5474b80f538bc11bc" href="/huster16/gatk-tools/blob/master/indel_realigner.xml">indel_realigner.xml</a></span>
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1017 </td>
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1018 <td class="content">
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1019 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="print_reads.xml" id="084bb1c569888ece53345b6d80b919d7-19269244ac276c5ac4c3ea35d88a0faa1c63dbf1" href="/huster16/gatk-tools/blob/master/print_reads.xml">print_reads.xml</a></span>
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1020 </td>
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1022 <span class="css-truncate css-truncate-target">
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1023 </span>
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1024 </td>
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1025 <td class="age">
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1026 <span class="css-truncate css-truncate-target"></span>
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1027 </td>
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1028 </tr>
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1029 <tr class="js-navigation-item">
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1030 <td class="icon">
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1031 <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg>
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1032 <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" />
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1033 </td>
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1034 <td class="content">
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1035 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="realigner_target_creator.xml" id="00d1312b6f84e2192f19921c8e5e53d7-86621b8b4cbbf521fa5741f6fecc16f87c810c1d" href="/huster16/gatk-tools/blob/master/realigner_target_creator.xml">realigner_target_creator.xml</a></span>
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1036 </td>
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1037 <td class="message">
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1038 <span class="css-truncate css-truncate-target">
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1039 </span>
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1040 </td>
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1041 <td class="age">
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1042 <span class="css-truncate css-truncate-target"></span>
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1043 </td>
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1044 </tr>
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1045 <tr class="js-navigation-item">
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1046 <td class="icon">
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1047 <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg>
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1048 <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" />
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1049 </td>
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1050 <td class="content">
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1051 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="tool_data_table_conf.xml.sample" id="60160a6e4efd651b475bcbf960abcc2d-b0e4b46b92ceb44e50c9abf01cf31db95628ac93" href="/huster16/gatk-tools/blob/master/tool_data_table_conf.xml.sample">tool_data_table_conf.xml.sample</a></span>
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1052 </td>
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1053 <td class="message">
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1054 <span class="css-truncate css-truncate-target">
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1055 </span>
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1056 </td>
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1057 <td class="age">
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1058 <span class="css-truncate css-truncate-target"></span>
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1059 </td>
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1060 </tr>
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1061 <tr class="js-navigation-item">
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1062 <td class="icon">
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1063 <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg>
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1064 <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" />
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1065 </td>
|
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1066 <td class="content">
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1067 <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="tool_dependencies.xml" id="1f1e2fcbf1ddc07a88bc59ca246c9a90-3ac9ffc6df38d4633e8022ed0b78e3c95e586b10" href="/huster16/gatk-tools/blob/master/tool_dependencies.xml">tool_dependencies.xml</a></span>
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1068 </td>
|
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1069 <td class="message">
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1070 <span class="css-truncate css-truncate-target">
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1071 </span>
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1072 </td>
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1073 <td class="age">
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1074 <span class="css-truncate css-truncate-target"></span>
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1075 </td>
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1076 </tr>
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1077 </tbody>
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1078 </table>
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1079
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1080 </include-fragment>
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1081
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1082
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1083
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1084 <div id="readme" class="Box Box--condensed instapaper_body js-code-block-container">
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1085 <div class="Box-header d-flex flex-items-center flex-justify-between px-2">
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1086 <h3 class="Box-title pr-3">
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1087 <svg class="octicon octicon-book" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M3 5h4v1H3V5zm0 3h4V7H3v1zm0 2h4V9H3v1zm11-5h-4v1h4V5zm0 2h-4v1h4V7zm0 2h-4v1h4V9zm2-6v9c0 .55-.45 1-1 1H9.5l-1 1-1-1H2c-.55 0-1-.45-1-1V3c0-.55.45-1 1-1h5.5l1 1 1-1H15c.55 0 1 .45 1 1zm-8 .5L7.5 3H2v9h6V3.5zm7-.5H9.5l-.5.5V12h6V3z"/></svg>
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|
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1088 README
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1089 </h3>
|
|
|
1090 </div>
|
|
|
1091 <div class="Box-body">
|
|
|
1092 <div class="plain"><pre style="white-space: pre-wrap">Installation note:
|
|
|
1093 A GATK license needs to be obtained separately from the Broad Institute (<a href="https://www.broadinstitute.org/gatk/" rel="nofollow">https://www.broadinstitute.org/gatk/</a>)
|
|
|
1094 to be able to use this tool. Once the license is obtained, the GATK Jar file must then be downloaded and moved
|
|
|
1095 to /mnt/galaxy/tools/GATK/x.x-x on the server. Substitute the appropriate version number in the file path.
|
|
|
1096 Be sure to download the correct version of the Jar file for the toolshed version installed.
|
|
|
1097 </pre></div>
|
|
|
1098 </div>
|
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1099 </div>
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1100
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1101
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1102
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1103 </div>
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1104 <div class="modal-backdrop js-touch-events"></div>
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1105 </div>
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1106
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1107 </main>
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1108 </div>
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1109
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1110
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1112
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1114 <div class="footer container-lg width-full px-3" role="contentinfo">
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1116 <ul class="list-style-none d-flex flex-wrap ">
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1117 <li class="mr-3">© 2019 <span title="0.27328s from unicorn-68fcf5fc59-q8f8h">GitHub</span>, Inc.</li>
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1124
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1125 <a aria-label="Homepage" title="GitHub" class="footer-octicon d-none d-lg-block mx-lg-4" href="https://github.com">
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1127 </a>
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1129 <li class="mr-3"><a data-ga-click="Footer, go to contact, text:contact" href="https://github.com/contact">Contact GitHub</a></li>
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1143
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1144
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1145 <div id="ajax-error-message" class="ajax-error-message flash flash-error">
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1146 <svg class="octicon octicon-alert" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M8.893 1.5c-.183-.31-.52-.5-.887-.5s-.703.19-.886.5L.138 13.499a.98.98 0 0 0 0 1.001c.193.31.53.501.886.501h13.964c.367 0 .704-.19.877-.5a1.03 1.03 0 0 0 .01-1.002L8.893 1.5zm.133 11.497H6.987v-2.003h2.039v2.003zm0-3.004H6.987V5.987h2.039v4.006z"/></svg>
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1147 <button type="button" class="flash-close js-ajax-error-dismiss" aria-label="Dismiss error">
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1148 <svg class="octicon octicon-x" viewBox="0 0 12 16" version="1.1" width="12" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M7.48 8l3.75 3.75-1.48 1.48L6 9.48l-3.75 3.75-1.48-1.48L4.52 8 .77 4.25l1.48-1.48L6 6.52l3.75-3.75 1.48 1.48L7.48 8z"/></svg>
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1149 </button>
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1150 You can’t perform that action at this time.
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1151 </div>
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1152
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1153
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1154 <script crossorigin="anonymous" integrity="sha512-EPrD+nddbyhpiLL8l3M8VfJpZr4J2EWQLaPXZ+6A3VDJKzS5HeZ3dkMVieHSdvIPHsMbWPyVlY42SWKoS4XTfA==" type="application/javascript" src="https://github.githubassets.com/assets/compat-bootstrap-831f12d4.js"></script>
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1155 <script crossorigin="anonymous" integrity="sha512-P6rRiDq0lrIYgYfVPJ4Is2goJODXsywx7ozNssJbEOAwc5cBChqaUFZ+puemlu3KAI/q5XfkOBaSNjXExBE3ag==" type="application/javascript" src="https://github.githubassets.com/assets/frameworks-15d12409.js"></script>
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1156
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1157 <script crossorigin="anonymous" async="async" integrity="sha512-sD5UHbq6I3rl+U+HEPeL+7sTZmew8P0O2uOtuHlXNJjtex4uLuwjFRTEKF/F1KbqXw52uf1B2lIwVE5ZNUqxqg==" type="application/javascript" src="https://github.githubassets.com/assets/github-bootstrap-857b0672.js"></script>
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1158
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1159
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1160
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1161 <div class="js-stale-session-flash stale-session-flash flash flash-warn flash-banner" hidden
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1162 >
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1163 <svg class="octicon octicon-alert" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M8.893 1.5c-.183-.31-.52-.5-.887-.5s-.703.19-.886.5L.138 13.499a.98.98 0 0 0 0 1.001c.193.31.53.501.886.501h13.964c.367 0 .704-.19.877-.5a1.03 1.03 0 0 0 .01-1.002L8.893 1.5zm.133 11.497H6.987v-2.003h2.039v2.003zm0-3.004H6.987V5.987h2.039v4.006z"/></svg>
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1164 <span class="signed-in-tab-flash">You signed in with another tab or window. <a href="">Reload</a> to refresh your session.</span>
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1165 <span class="signed-out-tab-flash">You signed out in another tab or window. <a href="">Reload</a> to refresh your session.</span>
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1166 </div>
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1167 <template id="site-details-dialog">
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1168 <details class="details-reset details-overlay details-overlay-dark lh-default text-gray-dark hx_rsm" open>
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1169 <summary role="button" aria-label="Close dialog"></summary>
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1170 <details-dialog class="Box Box--overlay d-flex flex-column anim-fade-in fast hx_rsm-dialog hx_rsm-modal">
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1171 <button class="Box-btn-octicon m-0 btn-octicon position-absolute right-0 top-0" type="button" aria-label="Close dialog" data-close-dialog>
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1172 <svg class="octicon octicon-x" viewBox="0 0 12 16" version="1.1" width="12" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M7.48 8l3.75 3.75-1.48 1.48L6 9.48l-3.75 3.75-1.48-1.48L4.52 8 .77 4.25l1.48-1.48L6 6.52l3.75-3.75 1.48 1.48L7.48 8z"/></svg>
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1173 </button>
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1174 <div class="octocat-spinner my-6 js-details-dialog-spinner"></div>
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1175 </details-dialog>
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1176 </details>
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1177 </template>
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1178
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1179 <div class="Popover js-hovercard-content position-absolute" style="display: none; outline: none;" tabindex="0">
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1180 <div class="Popover-message Popover-message--bottom-left Popover-message--large Box box-shadow-large" style="width:360px;">
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1181 </div>
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1182 </div>
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1183
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1184 <div aria-live="polite" class="js-global-screen-reader-notice sr-only"></div>
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1185
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1186 </body>
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1187 </html>
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1188
|
