Mercurial > repos > lz_hust > gatktools

changeset 13:e4b6c7a08f06 draft

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Uploaded
author lz_hust
date Sat, 01 Jun 2019 07:12:31 -0400
parents 7b2f77e2b0a4
children 68426930d59c
files tool_data_table_conf.xml.sample
diffstat 1 files changed, 12 insertions(+), 0 deletions(-) [+]
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line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_data_table_conf.xml.sample	Sat Jun 01 07:12:31 2019 -0400
@@ -0,0 +1,12 @@
+<tables>
+    <!-- Location of Picard dict files valid for GATK -->
+    <table name="gatk2_picard_indexes" comment_char="#" allow_duplicate_entries="False">
+        <columns>value, dbkey, name, path</columns>
+        <file path="tool-data/gatk2_picard_index.loc" />
+    </table>
+    <!-- Available of GATK references -->
+    <table name="gatk2_annotations" comment_char="#" allow_duplicate_entries="False">
+        <columns>value, name, gatk_value, tools_valid_for</columns>
+        <file path="tool-data/gatk2_annotations.txt" />
+    </table>
+</tables>