annotate CADDSuite-1.6/data/fragments/TYR.db @ 17:25a03362403c draft

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author marcel
date Sat, 15 Dec 2012 13:10:41 -0500
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17
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1 <node>TYR
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2 <node>Names
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3 <node>Tyrosine</node>
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4 <node>Tyrosin</node>
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5 <node>Tyr</node>
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6 <node>Y</node>
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7 </node>
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8 <node>Atoms
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9 <node>N<value>N 0.0892698 1.397582 0.01951128</value></node>
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10 <node>3H<value>H 0.7468582 2.066645 0.3997705</value></node>
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11 <node>CA<value>C -0.7022205 2.069859 -1.026261</value></node>
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12 <node>HA<value>H -0.008099081 2.359834 -1.816127</value></node>
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13 <node>C<value>C -1.325588 3.357111 -0.4775957</value></node>
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14 <node>O<value>O -0.5109698 4.260831 -0.1874116</value></node>
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15 <node>CB<value>C -1.734457 1.10693 -1.63201</value></node>
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16 <node>1HB<value>H -1.201299 0.2395796 -2.0242</value></node>
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17 <node>2HB<value>H -2.395853 0.7504926 -0.8408001</value></node>
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18 <node>CG<value>C -2.557806 1.696825 -2.76258</value></node>
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19 <node>CD1<value>C -3.932589 1.947373 -2.588092</value></node>
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20 <node>HD1<value>H -4.418424 1.704676 -1.654011</value></node>
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21 <node>CD2<value>C -1.942974 2.007092 -3.98996</value></node>
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22 <node>HD2<value>H -0.8916094 1.806731 -4.138027</value></node>
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23 <node>CE1<value>C -4.68326 2.520281 -3.629397</value></node>
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24 <node>HE1<value>H -5.736402 2.710342 -3.483602</value></node>
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25 <node>CE2<value>C -2.6951 2.579179 -5.030118</value></node>
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26 <node>HE2<value>H -2.222162 2.818849 -5.971263</value></node>
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27 <node>CZ<value>C -4.063968 2.83503 -4.851168</value></node>
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28 <node>OH<value>O -4.785331 3.388967 -5.865766</value></node>
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29 <node>HH<value>H -5.709894 3.51796 -5.645833</value></node>
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30 <node>OXT<value>O -2.492483 3.282188 -0.03387626</value></node>
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31 <node>1H<value>H -0.5246789 1.074702 0.7536617</value></node>
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32 <node>2H<value>H 0.5865244 0.613409 -0.3778604</value></node>
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33 </node>
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34 <node>Bonds
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35 <node>5<value>3H N s</value></node>
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36 <node>6<value>CA N s</value></node>
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37 <node>10<value>HA CA s</value></node>
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38 <node>11<value>C CA s</value></node>
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39 <node>14<value>O C d</value></node>
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40 <node>15<value>CB CA s</value></node>
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41 <node>19<value>1HB CB s</value></node>
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42 <node>20<value>2HB CB s</value></node>
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43 <node>21<value>CG CB s</value></node>
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44 <node>24<value>CD1 CG a</value></node>
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45 <node>27<value>HD1 CD1 s</value></node>
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46 <node>28<value>CD2 CG a</value></node>
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47 <node>31<value>HD2 CD2 s</value></node>
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48 <node>32<value>CE1 CD1 a</value></node>
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49 <node>35<value>HE1 CE1 s</value></node>
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50 <node>36<value>CE2 CD2 a</value></node>
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51 <node>39<value>HE2 CE2 s</value></node>
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52 <node>40<value>CZ CE1 a</value></node>
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53 <node>41<value>CZ CE2 a</value></node>
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54 <node>43<value>OH CZ s</value></node>
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55 <node>45<value>HH OH s</value></node>
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56 <node>46<value>OXT C s</value></node>
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57 <node>47<value>1H N s</value></node>
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58 <node>48<value>2H N s</value></node>
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59 </node>
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60 <node>Connections
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61 <node>N-term<value>N C-term s 1.33 0.5</value></node>
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62 <node>C-term<value>C N-term s 1.33 0.5</value></node>
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63 </node>
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64 <node>Properties
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65 <node>AMINO_ACID</node>
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66 </node>
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67 <node>Variants
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68 <node>Default
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69 <node>Delete
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70 <node>OXT</node>
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71 <node>1H</node>
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72 <node>2H</node>
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73 </node>
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74 <node>Rename
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75 <node>3H<value>H</value></node>
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76 </node>
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77 </node>
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78 <node>TYR-M
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79 <node>Properties
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80 <node>C_TERMINAL</node>
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81 <node>N_TERMINAL</node>
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82 </node>
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83 </node>
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84 <node>TYR-C
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85 <node>Delete
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86 <node>1H</node>
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87 <node>2H</node>
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88 </node>
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89 <node>Rename
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90 <node>3H<value>H</value></node>
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91 </node>
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92 <node>Properties
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93 <node>C_TERMINAL</node>
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94 </node>
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95 </node>
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96 <node>TYR-N
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97 <node>Delete
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98 <node>OXT</node>
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99 </node>
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100 <node>Properties
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101 <node>N_TERMINAL</node>
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102 </node>
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103 </node>
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104 </node>
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105 </node>