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2
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1 <?xml version="1.0"?>
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2 <macros>
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3 <token name="@WRAPPER_VERSION@">3.2.0</token>
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4
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5 <xml name="requirements">
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6 <requirements>
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7 <requirement type="package" version="1.1_4">r-batch</requirement>
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8 <requirement type="package" version="2.2.1">r-ggplot2</requirement>
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9 <requirement type="package" version="2.3">r-gridextra</requirement>
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10 <requirement type="package" version="1.4.3">r-reshape2</requirement>
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11 <yield />
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12 </requirements>
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13 </xml>
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14
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15 <xml name="stdio">
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16 <stdio>
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17 <exit_code range="1" level="fatal" />
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18 </stdio>
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19 </xml>
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20
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21
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22 <token name="@HELP_AUTHORS@">
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23 .. class:: infomark
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24
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25 **Authors** Manon Martin (manon.martin@uclouvain.be) and Marie Tremblay-Franco (marie.tremblay-franco@inra.fr; Galaxy integration)
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26
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27 .. class:: infomark
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28
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29 | Contact support@workflow4metabolomics.org for any questions or concerns about the Galaxy implementation of this tool.
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30
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31 ---------------------------------------------------
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32
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33 </token>
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34
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35 <token name="@HELP_CHANGELOG@">
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36
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37 ---------------------------------------------------
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38
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39 Changelog/News
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40 --------------
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41 **Version 3.2.0**
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42
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43 * Updated R scripts and the help section of NMR_ReadFids and NMR_preprocessing
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44 * Added sections
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45 * Created a variableMetadata file in output of the NMR_preprocessing module
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46 * Homogenised the input-output file names with the other modules
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47 * Suppressed the option ptw for the baseline correction, set to TRUE all the time now
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48 * Shift referencing: other values than 0 are admitted
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49 * The log file recovers the input/output parameters
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50 * Added an exclusion zone for the computation of the Baseline Correction criterion
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51 * Switched Internal Referencing (goes second) and Zero Order Phase Correction (goes first)
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52
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53 **Version 3.1.0**
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54
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55 * Implementation of NMR_ReadFids and NMR_preprocessing
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56
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57 </token>
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58
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59 <xml name="citation">
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60 <citations>
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61 <citation type="bibtex">@PhDThesis{Rousseau2011,
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62 title = {Statistical contribution to the analysis of metabonomics data in $^1$H NMR spectroscopy},
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63 author = {Rousseau, R.},
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64 school = {Institut de Statistique, Biostatistique et Sciences Actuarielles, Universit{\'e} catholique de Louvain},
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65 year = {2011}}
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66 </citation>
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67 <citation type="doi">10.1093/bioinformatics/btu813</citation>
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68 </citations>
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69 </xml>
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70
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71 </macros>
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