annotate test-data/output.html @ 27:636e332434ff draft

Uploaded
author martasampaio
date Mon, 28 Oct 2019 11:57:47 -0400
parents 5acc4fa8b62d
children
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22
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1 <table border="1" class="dataframe">
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2 <thead>
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3 <tr style="text-align: right;">
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4 <th>positions</th>
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5 <th>promoter_seq</th>
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6 <th>promoter_type</th>
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7 <th>scores</th>
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8 </tr>
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9 </thead>
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10 <tbody>
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11 <tr>
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12 <td>(238..260)</td>
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13 <td>AATAAGGAGTCACCATGACCAAC</td>
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14 <td>phage</td>
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15 <td>0.606</td>
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16 </tr>
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17 <tr>
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18 <td>(2996..3018)</td>
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19 <td>TAAAAACCCTCACCAGAACAGGG</td>
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20 <td>phage</td>
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21 <td>0.931</td>
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22 </tr>
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23 <tr>
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24 <td>(3062..3088)</td>
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25 <td>TAAGATTACTCTTATAGTAATTATCAT</td>
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26 <td>host</td>
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27 <td>0.729</td>
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28 </tr>
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29 <tr>
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30 <td>(4313..4342)</td>
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31 <td>TGAAATGAACGTGGAGACGGCTCGTAAGTT</td>
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32 <td>host</td>
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33 <td>0.653</td>
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34 </tr>
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35 <tr>
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36 <td>(4835..4855)</td>
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37 <td>ACTGGTCTCCGACGGTGTTAA</td>
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38 <td>phage</td>
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39 <td>0.516</td>
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40 </tr>
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41 <tr>
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42 <td>(4876..4907)</td>
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43 <td>TTGATAACGGCACAGATGATTCCTCGGAGACT</td>
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44 <td>host</td>
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45 <td>0.519</td>
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46 </tr>
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47 <tr>
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48 <td>(6000..6022)</td>
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49 <td>TAAAACCCCTCACCAAAACAGGG</td>
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50 <td>phage</td>
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51 <td>0.981</td>
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52 </tr>
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53 <tr>
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54 <td>(8257..8279)</td>
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55 <td>TAAAAACCCTCACCAAAACAGGG</td>
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56 <td>phage</td>
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57 <td>0.985</td>
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58 </tr>
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59 <tr>
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60 <td>(9458..9480)</td>
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61 <td>TAAAAACCCTCACCAGAACAGGG</td>
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62 <td>phage</td>
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63 <td>0.966</td>
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64 </tr>
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65 <tr>
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66 <td>(10632..10654)</td>
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67 <td>CCAAACCGATCCCTAAAGGGGTC</td>
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68 <td>phage</td>
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69 <td>0.657</td>
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70 </tr>
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71 <tr>
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72 <td>(11141..11163)</td>
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73 <td>TAAAAACCCTCACCAGAACAGGG</td>
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74 <td>phage</td>
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75 <td>0.948</td>
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76 </tr>
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77 <tr>
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78 <td>(11710..11730)</td>
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79 <td>CTGACTTGCCGATACCCTGAA</td>
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80 <td>phage</td>
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81 <td>0.557</td>
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82 </tr>
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83 <tr>
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84 <td>(13956..13978)</td>
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85 <td>CAAATACCCTCACCTAAACAGCT</td>
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86 <td>phage</td>
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87 <td>0.677</td>
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88 </tr>
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89 <tr>
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90 <td>(16512..16542)</td>
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91 <td>TTGACATCGAAGAGGTCTTCGTTGAGACAGT</td>
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92 <td>host</td>
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93 <td>0.748</td>
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94 </tr>
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95 <tr>
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96 <td>(17793..17815)</td>
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97 <td>TAAAACCCCTCACCTAAACAGGG</td>
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98 <td>phage</td>
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99 <td>0.990</td>
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100 </tr>
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101 <tr>
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102 <td>(17842..17864)</td>
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103 <td>ACTTAAAGATCACTCTAAGGGAG</td>
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104 <td>phage</td>
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105 <td>0.700</td>
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106 </tr>
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107 <tr>
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108 <td>(17869..17896)</td>
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109 <td>TATGCTTAAAGAGATCCAGCACTATCTG</td>
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110 <td>host</td>
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111 <td>0.777</td>
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112 </tr>
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113 <tr>
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114 <td>(19585..19615)</td>
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115 <td>TTGAGAACCTGCACGAAGCCATGATTAAGTT</td>
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116 <td>host</td>
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117 <td>0.529</td>
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118 </tr>
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119 <tr>
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120 <td>(20361..20383)</td>
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121 <td>TAAAAACCCTCACCTAAACAGGG</td>
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122 <td>phage</td>
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123 <td>0.993</td>
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124 </tr>
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125 <tr>
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126 <td>(21354..21376)</td>
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127 <td>TAAAAACCCTCACCTAAACAGGG</td>
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128 <td>phage</td>
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129 <td>0.990</td>
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130 </tr>
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131 <tr>
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132 <td>(26071..26093)</td>
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133 <td>TAAAAACACTCACCACAACAGGG</td>
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134 <td>phage</td>
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135 <td>0.953</td>
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136 </tr>
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137 <tr>
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138 <td>(32321..32341)</td>
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139 <td>GCCGCTCACCAAGTTCCTTAC</td>
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140 <td>phage</td>
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141 <td>0.665</td>
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142 </tr>
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143 <tr>
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144 <td>(33327..33349)</td>
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145 <td>TAAAACCCCTCACCTAAACAGGG</td>
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146 <td>phage</td>
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martasampaio
parents:
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147 <td>0.991</td>
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148 </tr>
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149 <tr>
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150 <td>(37729..37751)</td>
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parents:
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151 <td>TAAAAACCCTCACCTAAAGAGGG</td>
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martasampaio
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152 <td>phage</td>
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martasampaio
parents:
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153 <td>0.991</td>
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154 </tr>
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155 <tr>
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156 <td>(38653..38681)</td>
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157 <td>TTGACAAAGCGATCCCTGTGATCTATTAC</td>
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parents:
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158 <td>host</td>
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martasampaio
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159 <td>0.875</td>
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160 </tr>
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161 <tr>
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parents:
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162 <td>(38709..38731)</td>
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parents:
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163 <td>TTAAAACCCTCACCTAAACAGGG</td>
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martasampaio
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164 <td>phage</td>
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martasampaio
parents:
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165 <td>0.938</td>
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166 </tr>
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167 <tr>
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parents:
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168 <td>(38756..38783)</td>
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parents:
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169 <td>TTGACACCCTCAAAGGAGTCTGTAGAAT</td>
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martasampaio
parents:
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170 <td>host</td>
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martasampaio
parents:
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171 <td>1.000</td>
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parents:
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172 </tr>
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parents:
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173 <tr>
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parents:
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174 <td>(38917..38944)</td>
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parents:
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175 <td>TTGACACTGAGTAACAACGCTGTAGAAT</td>
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martasampaio
parents:
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176 <td>host</td>
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martasampaio
parents:
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177 <td>0.997</td>
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martasampaio
parents:
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178 </tr>
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parents:
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179 <tr>
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parents:
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180 <td>(39147..39178)</td>
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martasampaio
parents:
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181 <td>TAGACATGCACGTCACTGGTCTTGAATATGAT</td>
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martasampaio
parents:
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182 <td>host</td>
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martasampaio
parents:
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183 <td>0.697</td>
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martasampaio
parents:
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184 </tr>
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parents:
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185 <tr>
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parents:
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186 <td>(40226..40248)</td>
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martasampaio
parents:
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187 <td>AATAAGGAGTCACCATGACCAAC</td>
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martasampaio
parents:
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188 <td>phage</td>
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martasampaio
parents:
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189 <td>0.630</td>
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parents:
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190 </tr>
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martasampaio
parents:
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191 </tbody>
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192 </table>