Mercurial > repos > martasampaio > phagepromoter
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author | martasampaio |
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date | Fri, 22 Jan 2021 10:08:35 +0000 |
parents | 5acc4fa8b62d |
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<table border="1" class="dataframe"> <thead> <tr style="text-align: right;"> <th>positions</th> <th>promoter_seq</th> <th>promoter_type</th> <th>scores</th> </tr> </thead> <tbody> <tr> <td>(238..260)</td> <td>AATAAGGAGTCACCATGACCAAC</td> <td>phage</td> <td>0.606</td> </tr> <tr> <td>(2996..3018)</td> <td>TAAAAACCCTCACCAGAACAGGG</td> <td>phage</td> <td>0.931</td> </tr> <tr> <td>(3062..3088)</td> <td>TAAGATTACTCTTATAGTAATTATCAT</td> <td>host</td> <td>0.729</td> </tr> <tr> <td>(4313..4342)</td> <td>TGAAATGAACGTGGAGACGGCTCGTAAGTT</td> <td>host</td> <td>0.653</td> </tr> <tr> <td>(4835..4855)</td> <td>ACTGGTCTCCGACGGTGTTAA</td> <td>phage</td> <td>0.516</td> </tr> <tr> <td>(4876..4907)</td> <td>TTGATAACGGCACAGATGATTCCTCGGAGACT</td> <td>host</td> <td>0.519</td> </tr> <tr> <td>(6000..6022)</td> <td>TAAAACCCCTCACCAAAACAGGG</td> <td>phage</td> <td>0.981</td> </tr> <tr> <td>(8257..8279)</td> <td>TAAAAACCCTCACCAAAACAGGG</td> <td>phage</td> <td>0.985</td> </tr> <tr> <td>(9458..9480)</td> <td>TAAAAACCCTCACCAGAACAGGG</td> <td>phage</td> <td>0.966</td> </tr> <tr> <td>(10632..10654)</td> <td>CCAAACCGATCCCTAAAGGGGTC</td> <td>phage</td> <td>0.657</td> </tr> <tr> <td>(11141..11163)</td> <td>TAAAAACCCTCACCAGAACAGGG</td> <td>phage</td> <td>0.948</td> </tr> <tr> <td>(11710..11730)</td> <td>CTGACTTGCCGATACCCTGAA</td> <td>phage</td> <td>0.557</td> </tr> <tr> <td>(13956..13978)</td> <td>CAAATACCCTCACCTAAACAGCT</td> <td>phage</td> <td>0.677</td> </tr> <tr> <td>(16512..16542)</td> <td>TTGACATCGAAGAGGTCTTCGTTGAGACAGT</td> <td>host</td> <td>0.748</td> </tr> <tr> <td>(17793..17815)</td> <td>TAAAACCCCTCACCTAAACAGGG</td> <td>phage</td> <td>0.990</td> </tr> <tr> <td>(17842..17864)</td> <td>ACTTAAAGATCACTCTAAGGGAG</td> <td>phage</td> <td>0.700</td> </tr> <tr> <td>(17869..17896)</td> <td>TATGCTTAAAGAGATCCAGCACTATCTG</td> <td>host</td> <td>0.777</td> </tr> <tr> <td>(19585..19615)</td> <td>TTGAGAACCTGCACGAAGCCATGATTAAGTT</td> <td>host</td> <td>0.529</td> </tr> <tr> <td>(20361..20383)</td> <td>TAAAAACCCTCACCTAAACAGGG</td> <td>phage</td> <td>0.993</td> </tr> <tr> <td>(21354..21376)</td> <td>TAAAAACCCTCACCTAAACAGGG</td> <td>phage</td> <td>0.990</td> </tr> <tr> <td>(26071..26093)</td> <td>TAAAAACACTCACCACAACAGGG</td> <td>phage</td> <td>0.953</td> </tr> <tr> <td>(32321..32341)</td> <td>GCCGCTCACCAAGTTCCTTAC</td> <td>phage</td> <td>0.665</td> </tr> <tr> <td>(33327..33349)</td> <td>TAAAACCCCTCACCTAAACAGGG</td> <td>phage</td> <td>0.991</td> </tr> <tr> <td>(37729..37751)</td> <td>TAAAAACCCTCACCTAAAGAGGG</td> <td>phage</td> <td>0.991</td> </tr> <tr> <td>(38653..38681)</td> <td>TTGACAAAGCGATCCCTGTGATCTATTAC</td> <td>host</td> <td>0.875</td> </tr> <tr> <td>(38709..38731)</td> <td>TTAAAACCCTCACCTAAACAGGG</td> <td>phage</td> <td>0.938</td> </tr> <tr> <td>(38756..38783)</td> <td>TTGACACCCTCAAAGGAGTCTGTAGAAT</td> <td>host</td> <td>1.000</td> </tr> <tr> <td>(38917..38944)</td> <td>TTGACACTGAGTAACAACGCTGTAGAAT</td> <td>host</td> <td>0.997</td> </tr> <tr> <td>(39147..39178)</td> <td>TAGACATGCACGTCACTGGTCTTGAATATGAT</td> <td>host</td> <td>0.697</td> </tr> <tr> <td>(40226..40248)</td> <td>AATAAGGAGTCACCATGACCAAC</td> <td>phage</td> <td>0.630</td> </tr> </tbody> </table>