Mercurial > repos > matt-shirley > ncbi_sra_toolkit
annotate README.md @ 29:ce2bb7841f17 default tip
Fix for https://github.com/mdshw5/sra-tools-galaxy/issues/1
| author | Matt Shirley <mdshw5@gmail.com> | 
|---|---|
| date | Tue, 07 Apr 2015 09:09:23 -0400 | 
| parents | fdc981664a43 | 
| children | 
| rev | line source | 
|---|---|
| 28 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 1 [](https://travis-ci.org/mdshw5/sra-tools-galaxy) | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 2 | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 3 The Galaxy tool wrappers contained in this tool shed repository rely on software developed by | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 4 the NCBI: http://github.com/ncbi/sra-tools. | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 5 | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 6 # INSTALLATION | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 7 | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 8 This software release was designed to install using the Galaxy toolshed under Linux and MacOS operating systems on Intel x86-compatible 32/64 bit architectures. | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 9 | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 10 *Build Requirements* | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 11 | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 12 - bash | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 13 - git | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 14 - make | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 15 - gcc | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 16 - g++ | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 17 - perl | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 18 - libxml2 | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 19 | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 20 On a Debian OS use: | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 21 | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 22 apt-get install build-essential libxml2-dev git | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 23 | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 24 On a Mac with [command line tools](https://developer.apple.com/downloads/index.action) installed: | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 25 | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 26 brew install git libxml2 | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 27 | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 28 CONTROLLED-ACCESS DATA | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 29 | 
| 
fdc981664a43
Update to most recent GitHub version passing tests.
 Matt Shirley <mdshw5@gmail.com> parents: diff
changeset | 30 Encrypted, controlled-access data is not supported. | 
