Mercurial > repos > matt-shirley > ncbi_sra_toolkit
comparison README.md @ 28:fdc981664a43
Update to most recent GitHub version passing tests.
| author | Matt Shirley <mdshw5@gmail.com> |
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| date | Wed, 01 Apr 2015 12:35:38 -0400 |
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| 1 [](https://travis-ci.org/mdshw5/sra-tools-galaxy) | |
| 2 | |
| 3 The Galaxy tool wrappers contained in this tool shed repository rely on software developed by | |
| 4 the NCBI: http://github.com/ncbi/sra-tools. | |
| 5 | |
| 6 # INSTALLATION | |
| 7 | |
| 8 This software release was designed to install using the Galaxy toolshed under Linux and MacOS operating systems on Intel x86-compatible 32/64 bit architectures. | |
| 9 | |
| 10 *Build Requirements* | |
| 11 | |
| 12 - bash | |
| 13 - git | |
| 14 - make | |
| 15 - gcc | |
| 16 - g++ | |
| 17 - perl | |
| 18 - libxml2 | |
| 19 | |
| 20 On a Debian OS use: | |
| 21 | |
| 22 apt-get install build-essential libxml2-dev git | |
| 23 | |
| 24 On a Mac with [command line tools](https://developer.apple.com/downloads/index.action) installed: | |
| 25 | |
| 26 brew install git libxml2 | |
| 27 | |
| 28 CONTROLLED-ACCESS DATA | |
| 29 | |
| 30 Encrypted, controlled-access data is not supported. |