Mercurial > repos > matt-shirley > ncbi_sra_toolkit
changeset 9:eb55ff614fed
Fixed bug affecting --split-spot option.
| author | Matt Shirley <mdshw5@gmail.com> |
|---|---|
| date | Fri, 25 Jul 2014 14:27:16 -0400 |
| parents | 558a88cd49e4 |
| children | 16f96ab0196b |
| files | fastq_dump.xml |
| diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/fastq_dump.xml Thu Mar 13 16:11:04 2014 -0400 +++ b/fastq_dump.xml Fri Jul 25 14:27:16 2014 -0400 @@ -1,4 +1,4 @@ -<tool id="fastq_dump" name="Extract reads" version="1.1.1"> +<tool id="fastq_dump" name="Extract reads" version="1.1.2"> <description> from NCBI SRA.</description> <command> fastq-dump --log-level fatal @@ -9,7 +9,7 @@ #end if --defline-seq '@\$sn[_\$rn]/\$ri' --stdout - #if $split == "yes": + #if str( $split ) == "yes": --split-spot #end if #if str( $alignments ) == "aligned":