Mercurial > repos > mbernt > longorf
comparison test-data/test_input.fasta @ 1:1c4b24e9bb16 draft
planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/blob/master/tools/longorf/ commit 5be33ea99532ab3abb000564af4c63c81c4ccd87
author | mbernt |
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date | Mon, 16 Jul 2018 11:01:52 -0400 |
parents | ec898924d8c7 |
children |
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0:ec898924d8c7 | 1:1c4b24e9bb16 |
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1 >14520830-14521117(-)_1 [2 - 37] | 1 >STRG.4.1(-)_1 [3 - 77] |
2 KPLENISASREF | 2 PNHCLRGHESPETRQSPLSGKRIPS |
3 >14520830-14521117(-)_2 [3 - 47] | 3 >STRG.4.1(-)_2 [59 - 88] |
4 SPWRIFQPAENFDLQ | 4 WKEDPLIVCP |
5 >14520830-14521117(-)_3 [41 - 94] | 5 >STRG.4.1(-)_3 [92 - 127] |
6 LAVGFGLIFLRSGWMPCL | 6 WNRERYFQGFGL |
7 >14520830-14521117(-)_4 [63 - 152] | 7 >STRG.4.1(-)_4 [131 - 268] |
8 FSYDLGGCLACDSCSSYSPNEGQCPARKLE | 8 LPTQKQKDRWGTHTLERFGFTVPTMPAVISLFTETNPSSQITSTQD |
9 >14520830-14521117(-)_5 [146 - 175] | 9 >STRG.4.1(-)_5 [81 - 332] |
10 VGMMDLCSET | 10 SAPDGIGKDTSRGSDYNCQPRNKRTAGGLTPWRDLGSQCPQCQRLFHYLRRRIPPVRSLQ |
11 >14520830-14521117(-)_6 [156 - 200] | 11 LKTKFWRHPDHLGTHRLLGVPAEN |
12 WTCVQRLNRTNKQNK | 12 >STRG.4.1(-)_6 [272 - 379] |
13 >14520830-14521117(-)_7 [1 - 240] | 13 VLETPRPSGHAQATWGSCGELSSQMQMESAMMPSTW |
14 KAPGEYFSQQRILTCSRIWFDFPTIWVDALPVTVAVPIRQMKGSAPHVSWNDGPVFRDLT | 14 >STRG.4.1(-)_7 [366 - 437] |
15 EPTSKTSENRKKEEDTGINS | 15 CPLRGRGTGRSHGAAGHAVPPNRH |
16 >14520830-14521117(-)_8 [179 - 325] | 16 >STRG.4.1(-)_8 [465 - 518] |
17 QNQQAKQVRTGKRKRTLESILESCTTWFFFHSKFRGTKPLENISASREF | 17 KRYGMCCVYLDKFVGGCG |
18 >14520830-14521117(-)_9 [204 - 335] | 18 >STRG.4.1(-)_9 [383 - 565] |
19 EQEKGRGHWNQFLRVALLGFSSIPSFVGQSPWRIFQPAENFDLQ | 19 GHWTKPWSCGACGTTQSTLRPRSSEPIKALRNVLCLPGQICWWLWLSWMGRNKKPWTWFP |
20 >14520830-14521117(-)_10 [329 - 382] | 20 W |
21 LAVGFGLIFLRSGWMPCL | 21 >STRG.4.1(-)_10 [599 - 664] |
22 >14520830-14521117(-)_11 [351 - 440] | 22 SSEWWSWWTSASSPSTPVGRSS |
23 FSYDLGGCLACDSCSSYSPNEGQCPARKLE | 23 >STRG.4.1(-)_11 [522 - 665] |
24 >14520830-14521117(-)_12 [434 - 463] | 24 AGWVGTRSLGPGSLGDQRGPGGALPDRRSGGRGGHRRHPHQLPWGEAA |
25 VGMMDLCSET | 25 >STRG.4.1(-)_12 [1 - 666] |
26 >14520830-14521117(-)_13 [444 - 488] | 26 DPTTVYVDMRALRHDRVRLVERGSPHSLPLMESGKILPGVRIIIANPETKGPLGDSHLGE |
27 WTCVQRLNRTNKQNK | 27 IWVHSAHNASGYFTIYGDESLQSDHFNSRLSFGDTQTIWARTGYLGFLRRTELTDANGER |
28 >14520830-14521117(-)_14 [244 - 528] | 28 HDALYVVGALDEAMELRGMRYHPIDIETSVIRAHKSVTECAVFTWTNLLVVVVELDGSEQ |
29 ELHYLVFLPFQVSWDKAPGEYFSQQRILTCSRIWFDFPTIWVDALPVTVAVPIRQMKGSA | 29 EALDLVPLVTNVVLEEHYLIVGVVVVVDIGVIPINSRGEKQR |
30 PHVSWNDGPVFRDLTEPTSKTSENRKKEEDTGINS | 30 >STRG.4.1(-)_13 [665 - 594] (REVERSE SENSE) |
31 >14520830-14521117(-)_15 [467 - 574] | 31 RCFSPRELMGMTPMSTTTTTPTIR |
32 QNQQAKQVRTGKRKRTLESILESCTTWFFFHSKFRG | 32 >STRG.4.1(-)_14 [631 - 491] (REVERSE SENSE) |
33 >14520830-14521117(-)_16 [492 - 575] | 33 RRCPPRPPLRRSGSAPPGPRWSPREPGPRLLVPTHPAQPQPPTNLSR |
34 EQEKGRGHWNQFLRVALLGFSSIPSFVG | 34 >STRG.4.1(-)_15 [590 - 375] (REVERSE SENSE) |
35 >14520830-14521117(-)_17 [532 - 576] | 35 CSSRTTLVTKGTRSKASCSDPSSSTTTTNKFVQVNTAHSVTLLWALMTEVSMSIGWYRMP |
36 ELHYLVFLPFQVSWD | 36 RSSMASSSAPTT |
37 >14520830-14521117(-)_18 [575 - 543] (REVERSE SENSE) | 37 >STRG.4.1(-)_16 [448 - 341] (REVERSE SENSE) |
38 SHETWNGRKTK | 38 PRSQCRLGGTACPAAPWLRPVPLPRRGHHGALHLHL |
39 >14520830-14521117(-)_19 [574 - 524] (REVERSE SENSE) | 39 >STRG.4.1(-)_17 [371 - 312] (REVERSE SENSE) |
40 PTKLGMEEKPSSATLKN | 40 RASWRSPFASVSSVLRRNPK |
41 >14520830-14521117(-)_20 [576 - 466] (REVERSE SENSE) | 41 >STRG.4.1(-)_18 [666 - 271] (REVERSE SENSE) |
42 VPRNLEWKKNQVVQLSRIDSSVLFLFPVLTCFACWFC | 42 ALLLPTGVDGDDADVHHDHHSDDQVVLLQDHVGHQGNQVQGFLFRPIQLNHNHQQICPGK |
43 >14520830-14521117(-)_21 [520 - 458] (REVERSE SENSE) | 43 HSTFRNAFMGSDDRGLNVDWVVPHAPQLHGFVQCPYHVEGIMALSICICELSSPQEPQVA |
44 FQCPLPFSCSHLFCLLVLLSL | 44 CACPDGLGVSKT |
45 >14520830-14521117(-)_22 [454 - 401] (REVERSE SENSE) | 45 >STRG.4.1(-)_19 [337 - 260] (REVERSE SENSE) |
46 TQVHHSNLRAGHCPSFGE | 46 AQFSAGTPSSLCVPRWSGCLQNLVLS |
47 >14520830-14521117(-)_23 [397 - 359] (REVERSE SENSE) | 47 >STRG.4.1(-)_20 [308 - 255] (REVERSE SENSE) |
48 ELQLSQARHPPRS | 48 PVRAQMVWVSPKLSLELK |
49 >14520830-14521117(-)_24 [355 - 311] (REVERSE SENSE) | 49 >STRG.4.1(-)_21 [256 - 224] (REVERSE SENSE) |
50 ENQTKSYCKSKFSAG | 50 SDLTGGIRLRK |
51 >14520830-14521117(-)_25 [539 - 255] (REVERSE SENSE) | 51 >STRG.4.1(-)_22 [246 - 169] (REVERSE SENSE) |
52 CNSQELIPVSSSFFLFSLVLLVGSVKSLNTGPSFQLTCGALPFIWRIGTATVTGKASTQI | 52 LEGFVSVNSEITAGIVGTVNPNLSKV |
53 VGKSNQILLQVKILCWLKYSPGALSHETWNGRKTK | 53 >STRG.4.1(-)_23 [217 - 128] (REVERSE SENSE) |
54 >14520830-14521117(-)_26 [307 - 236] (REVERSE SENSE) | 54 NNRWHCGHCEPKSLQGVSPPAVLLFLGWQL |
55 NILQGLCPTKLGMEEKPSSATLKN | 55 >STRG.4.1(-)_24 [188 - 78] (REVERSE SENSE) |
56 >14520830-14521117(-)_27 [462 - 178] (REVERSE SENSE) | 56 TQISPRCESPSGPFVSGLAIIIRTPGSIFPDSIRGRL |
57 VSEHRSIIPTYVRGTALHLANRNCNCHRQGIHPDRRKIKPNPTASQNSLLAEIFSRGFVP | 57 >STRG.4.1(-)_25 [165 - 58] (REVERSE SENSE) |
58 RNLEWKKNQVVQLSRIDSSVLFLFPVLTCFACWFC | 58 VPQRSFCFWVGNYNPNPWKYLSRFHQGQTMRGSSFH |
59 >14520830-14521117(-)_28 [232 - 170] (REVERSE SENSE) | 59 >STRG.4.1(-)_26 [74 - 18] (REVERSE SENSE) |
60 FQCPLPFSCSHLFCLLVLLSL | 60 GDPLSTKRTLSCLRALMST |
61 >14520830-14521117(-)_29 [166 - 113] (REVERSE SENSE) | 61 >STRG.4.1(-)_27 [124 - 2] (REVERSE SENSE) |
62 TQVHHSNLRAGHCPSFGE | 62 SEPLEVSFPIPSGADYEGILFPLSGLCRVSGLSCPRRQWLG |
63 >14520830-14521117(-)_30 [109 - 71] (REVERSE SENSE) | 63 >STRG.4.1(-)_28 [54 - 1] (REVERSE SENSE) |
64 ELQLSQARHPPRS | 64 ADSVVSQGSHVHVDSGWV |
65 >14520830-14521117(-)_31 [67 - 23] (REVERSE SENSE) | 65 >STRG.6.1(-)_1 [1 - 63] |
66 ENQTKSYCKSKFSAG | 66 NWDASWRKDVSRSHQCLLPFH |
67 >14520830-14521117(-)_32 [251 - 3] (REVERSE SENSE) | 67 >STRG.6.1(-)_2 [24 - 182] |
68 CNSQELIPVSSSFFLFSLVLLVGSVKSLNTGPSFQLTCGALPFIWRIGTATVTGKASTQI | 68 RCLTQPPVPSAVPLSCSVNFTPLEKWPSAWTLTVDWDLSSGASAVCILGTSPS |
69 VGKSNQILLQVKILCWLKYSPGA | 69 >STRG.6.1(-)_3 [94 - 195] |
70 >14520830-14521117(-)_33 [174 - 1] (REVERSE SENSE) | 70 RSGHLPGPLLWTGICPLVPLQCVFWAPVHPDPAL |
71 VSEHRSIIPTYVRGTALHLANRNCNCHRQGIHPDRRKIKPNPTASQNSLLAEIFSRGF | 71 >STRG.6.1(-)_4 [186 - 233] |
72 >103089310-103089560(-)_1 [2 - 37] | 72 SRPLSWKPTPPCGFLP |
73 GTSEKFLKILLS | 73 >STRG.6.1(-)_5 [2 - 250] |
74 >103089310-103089560(-)_2 [24 - 92] | 74 TGMLAGVKMSHAATSAFCRSIKLQCELYPSREVAICLDPYCGLGFVLWCLCSVYSGHQSI |
75 RFYYHRYLFWFCVSVLSADGPKL | 75 LIPPSELETNPALWLLAVSQYKV |
76 >103089310-103089560(-)_3 [13 - 117] | 76 >STRG.6.1(-)_6 [199 - 252] |
77 KVSEDFIIIDTCFGFVYLYSLQMVQNCNGVCIRRK | 77 AGNQPRLVASCRESVQSP |
78 >103089310-103089560(-)_4 [138 - 167] | 78 >STRG.6.1(-)_7 [237 - 121] (REVERSE SENSE) |
79 TACIWLHCGL | 79 LTARSHKAGLVSSSEGGIRMDWCPEYTLQRHQRTNPSPQ |
80 >103089310-103089560(-)_5 [180 - 260] | 80 >STRG.6.1(-)_8 [251 - 93] (REVERSE SENSE) |
81 NHPYVSVSGYTRKRKESQSGTKSGRYV | 81 GLCTDSRQEATRRGWFPAQRAGSGWTGAQNTHCRGTRGQIPVHSKGPGRWPLL |
82 >103089310-103089560(-)_6 [41 - 271] | 82 >STRG.6.1(-)_9 [117 - 85] (REVERSE SENSE) |
83 ILVLVLCICTLCRWSKIVMESVLEENKGKIRLNCMYMAPLWLVTLLKSSVCQCIWIHEEK | 83 GSRQMATSLEG |
84 ERVSEWNKEWEVRLKSF | 84 >STRG.6.1(-)_10 [81 - 34] (REVERSE SENSE) |
85 >103089310-103089560(-)_7 [127 - 288] | 85 SSHCSLMERQKALVAA |
86 NQAELHVYGSTVACDTFKIIRMSVYLDTRGKGKSLRVEQRVGGTSEKFLKILLS | 86 >STRG.6.1(-)_11 [250 - 14] (REVERSE SENSE) |
87 >103089310-103089560(-)_8 [275 - 343] | 87 DFVLTHGKKPQGGVGFQLRGRDQDGLVPRIHTAEAPEDKSQSTVRVQADGHFSRGVKFTL |
88 RFYYHRYLFWFCVSVLSADGPKL | 88 QLNGTAEGTGGCVRHLYAS |
89 >103089310-103089560(-)_9 [264 - 368] | 89 >STRG.6.1(-)_12 [62 - 3] (REVERSE SENSE) |
90 KVSEDFIIIDTCFGFVYLYSLQMVQNCNGVCIRRK | 90 WNGRRHWWLRETSLRQLASQ |
91 >103089310-103089560(-)_10 [389 - 418] | 91 >STRG.6.1(-)_13 [30 - 1] (REVERSE SENSE) |
92 TACIWLHCGL | 92 DIFTPASIPV |
93 >103089310-103089560(-)_11 [378 - 500] | 93 >STRG.8.1(-)_1 [18 - 56] |
94 NQAELHVYGSTVACDTFKIIRMSVYLDTRGKGKSLRVEQRV | 94 RTSKKPNGRDPTV |
95 >103089310-103089560(-)_12 [292 - 501] | 95 >STRG.8.1(-)_2 [60 - 95] |
96 ILVLVLCICTLCRWSKIVMESVLEENKGKIRLNCMYMAPLWLVTLLKSSVCQCIWIHEEK | 96 RLAKAAVVCHRV |
97 ERVSEWNKEW | 97 >STRG.8.1(-)_3 [99 - 137] |
98 >103089310-103089560(-)_13 [431 - 502] | 98 TSLQTAPRLVPTH |
99 NHPYVSVSGYTRKRKESQSGTKSG | 99 >STRG.8.1(-)_4 [2 - 205] |
100 >103089310-103089560(-)_14 [500 - 447] (REVERSE SENSE) | 100 VTPAIKDFQKAQRERSHSLKVGQSCCGLSQSLNISPNRPETGSHTLKMPITTLRILSTRR |
101 HSLFHSETLSFSSCIQIH | |
102 >103089310-103089560(-)_15 [480 - 436] (REVERSE SENSE) | |
103 DSFLFLVYPDTLTYG | |
104 >103089310-103089560(-)_16 [502 - 383] (REVERSE SENSE) | |
105 PTLCSTLRLFPFPRVSRYTDIRMILKVSQATVEPYTCSSA | |
106 >103089310-103089560(-)_17 [426 - 361] (REVERSE SENSE) | |
107 KCHKPQWSHIHAVQPDFTLIFF | |
108 >103089310-103089560(-)_18 [357 - 289] (REVERSE SENSE) | |
109 YRLHYNFGPSAESTDTQNQNKYL | |
110 >103089310-103089560(-)_19 [379 - 233] (REVERSE SENSE) | |
111 FYPYFLLIQTPLQFWTICREYRYTKPKQVSMIIKSSETFQTYLPLFVPL | |
112 >103089310-103089560(-)_20 [279 - 196] (REVERSE SENSE) | |
113 NLQKLFRRTSHSLFHSETLSFSSCIQIH | |
114 >103089310-103089560(-)_21 [229 - 185] (REVERSE SENSE) | |
115 DSFLFLVYPDTLTYG | |
116 >103089310-103089560(-)_22 [443 - 132] (REVERSE SENSE) | |
117 HTDDFKSVTSHSGAIYMQFSLILPLFSSNTDSITILDHLQRVQIHKTKTSIYDNKIFRNF | |
118 SDVPPTLCSTLRLFPFPRVSRYTDIRMILKVSQATVEPYTCSSA | |
119 >103089310-103089560(-)_23 [175 - 110] (REVERSE SENSE) | |
120 KCHKPQWSHIHAVQPDFTLIFF | |
121 >103089310-103089560(-)_24 [106 - 38] (REVERSE SENSE) | |
122 YRLHYNFGPSAESTDTQNQNKYL | |
123 >103089310-103089560(-)_25 [128 - 3] (REVERSE SENSE) | |
124 FYPYFLLIQTPLQFWTICREYRYTKPKQVSMIIKSSETFQTY | |
125 >103089310-103089560(-)_26 [192 - 1] (REVERSE SENSE) | |
126 HTDDFKSVTSHSGAIYMQFSLILPLFSSNTDSITILDHLQRVQIHKTKTSIYDNKIFRNF | |
127 SDVP |