diff Sbml2CompoundGraph.xml @ 1:e4fe3d5892dd draft

planemo upload for repository https://forge.inrae.fr/metexplore/met4j-galaxy commit 6bb33ff0ff022029543e5e5ace7d16418715aa1c

--- a/Sbml2CompoundGraph.xml	Thu Mar 13 15:49:24 2025 +0000
+++ b/Sbml2CompoundGraph.xml	Mon Aug 25 16:08:00 2025 +0000
@@ -6,7 +6,7 @@
   </macros>
   <expand macro="bio_tools"/>
   <expand macro="requirements"/>
-  <command detect_errors="exit_code"><![CDATA[met4j fr.inrae.toulouse.metexplore.met4j_toolbox.convert.Sbml2CompoundGraph -i "$inputPath"
+  <command detect_errors="exit_code"><![CDATA[met4j convert.Sbml2CompoundGraph -i "$inputPath"
 #if str($inputSide) != 'None':
  -sc "$inputSide"
 #end if
@@ -49,7 +49,13 @@
     </param>
   </inputs>
   <outputs>
-    <data format="txt" name="output"/>
+    <data format="txt" name="output">
+      <change_format>
+        <when input="format" value="tab" format="tabular" />
+        <when input="format" value="json" format="json" />
+        <when input="format" value="matrix" format="csv" />
+      </change_format>
+    </data>
   </outputs>
   <tests>
     <test>