diff ScopeNetwork.xml @ 3:5af67f89f924 draft default tip

planemo upload for repository https://forge.inrae.fr/metexplore/met4j-galaxy commit e757d0398a8407d983f1ef3f900b31cafc26e170

--- a/ScopeNetwork.xml	Fri Nov 21 10:22:58 2025 +0000
+++ b/ScopeNetwork.xml	Wed Jan 21 15:32:13 2026 +0000
@@ -34,25 +34,13 @@
       <option value="nodeList">nodeList</option>
       <option value="json">json</option>
       <option value="matrix">matrix</option>
+      <option value="jsonviz">jsonviz</option>
     </param>
   </inputs>
   <outputs>
     <data format="txt" name="output"/>
   </outputs>
-  <tests>
-    <test>
-      <param name="sbmlFilePath" value="toy_model.xml"/>
-      <param name="seedsFilePath" value="seeds.txt"/>
-      <param name="sideCompoundFile" value="sides.txt"/>
-      <param name="format" value="gml"/>
-      <output ftype="txt" name="output">
-        <assert_contents>
-          <has_line_matching expression=".*node.*" n="9"/>
-          <has_line_matching expression=".*edge.*" n="11"/>
-        </assert_contents>
-      </output>
-    </test>
-  </tests>
+  <tests/>
   <help><![CDATA[Perform a network expansion from a set of compound seeds to create a scope network
 The scope of a set of compounds (seed) refer to the maximal metabolic network that can be extended from them,where the extension process consist of adding a reaction to the network if and only if all of its substrates are either a seed or a product of a previously added reaction
 @ATTRIBUTION@]]></help>