Mercurial > repos > mgarnier > pangenome_cog_analysis
diff pangenomeCogAnalysis_V1.pl @ 10:ccb38fd085b2 draft
Uploaded
author | mgarnier |
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date | Mon, 05 Jul 2021 12:52:58 +0000 |
parents | 9132bdc6ce8b |
children | b36506d26a43 |
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--- a/pangenomeCogAnalysis_V1.pl Fri Jul 02 19:57:16 2021 +0000 +++ b/pangenomeCogAnalysis_V1.pl Mon Jul 05 12:52:58 2021 +0000 @@ -496,7 +496,7 @@ - if ($type && $type eq "mRNA" && $gene_name =~ /ID=([^;]+);/){ + if ($type && ($type eq "mRNA" or $type eq "CDS") && $gene_name =~ /ID=([^;]+);/){ my $gene = $1; # print $gene."\n"; # exit;