Mercurial > repos > mheinzl > fsd
changeset 12:9033fd840986 draft
planemo upload for repository https://github.com/monikaheinzl/galaxyProject/tree/master/tools/fsd commit c55872ebd7721a33174a56124bcd5d6ec1dc20a9
| author | mheinzl |
|---|---|
| date | Wed, 23 May 2018 14:52:52 -0400 |
| parents | b615c7e51f40 |
| children | 2921d77df2ee |
| files | fsd.py fsd.xml |
| diffstat | 2 files changed, 6 insertions(+), 6 deletions(-) [+] |
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--- a/fsd.py Tue May 15 14:22:43 2018 -0400 +++ b/fsd.py Wed May 23 14:52:52 2018 -0400 @@ -227,7 +227,7 @@ output_file.write("\nFamily size") for i in label: output_file.write("{}{}".format(sep, i)) - output_file.write("{}sum".format(sep)) + # output_file.write("{}sum".format(sep)) output_file.write("\n") j = 0 for fs in counts[1][0:len(counts[1]) - 1]: @@ -236,15 +236,15 @@ else: fs = "={}".format(fs) output_file.write("FS{}{}".format(fs, sep)) - values_of_fs = [] + # values_of_fs = [] if len(label) == 1: output_file.write("{}{}".format(int(counts[0][j]), sep)) - values_of_fs.append(int(counts[0][j])) + # values_of_fs.append(int(counts[0][j])) else: for n in range(len(label)): output_file.write("{}{}".format(int(counts[0][n][j]), sep)) - values_of_fs.append(int(counts[0][n][j])) - output_file.write("{}\n".format(sum(values_of_fs))) + # values_of_fs.append(int(counts[0][n][j])) + #output_file.write("{}\n".format(sum(values_of_fs))) j += 1 output_file.write("sum{}".format(sep)) values_for_sum = []
--- a/fsd.xml Tue May 15 14:22:43 2018 -0400 +++ b/fsd.xml Wed May 23 14:52:52 2018 -0400 @@ -1,6 +1,6 @@ <?xml version="1.0" encoding="UTF-8"?> <!-- galaxy version 16.04 --> -<tool id="fsd" name="Duplex Sequencing Analysis:" version="0.0.12"> +<tool id="fsd" name="Duplex Sequencing Analysis: fsd" version="0.0.14"> <description>Family size distribution (FSD) of tags</description> <requirements> <requirement type="package" version="2.7">python</requirement>