annotate tool-data/gd.restriction_enzymes.txt.sample @ 6:626b714f72bb

add gd_ploteig
author Richard Burhans <burhans@bx.psu.edu>
date Tue, 10 Apr 2012 13:51:19 -0400
parents 2c498d40ecde
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
1 Acc65I - GGTACC Acc65I
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
2 AccB7I - CCANNNNNTGG AccB7I
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
3 AccI - GT(A/C)(G/T)AC AccI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
4 AccIII - TCCGGA AccIII
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
5 AcyI - G(A/G)CG(C/T)C AcyI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
6 AgeI - ACCGGT AgeI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
7 AluI - AGCT AluI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
8 Alw44I - GTGCAC Alw44I
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
9 ApaI - GGGCCC ApaI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
10 AvaI - C(C/T)CG(A/G)G AvaI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
11 AvaII - GG(A/T)CC AvaII
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
12 BalI - TGGCCA BalI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
13 BamHI - GGATCC BamHI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
14 BanI - GG(C/T)(A/G)CC BanI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
15 BanII - G(A/G)GC(C/T)C BanII
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
16 BbuI - GCATGC BbuI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
17 BclI - TGATCA BclI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
18 BglI - GCCNNNNNGGC BglI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
19 BglII - AGATCT BglII
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
20 BsaMI - GAATGC BsaMI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
21 BsaOI - CG(A/G)(C/T)CG BsaOI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
22 Bsp1286I - G(A/G/T)GC(A/C/T)C Bsp1286I
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
23 BsrBRI - GATNNNNATC BsrBRI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
24 BsrSI - ACTGG BsrSI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
25 BssHII - GCGCGC BssHII
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
26 Bst98I - CTTAAG Bst98I
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
27 BstEII - GGTNACC BstEII
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
28 BstOI - CC(A/T)GG BstOI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
29 BstXI - CCANNNNNNTGG BstXI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
30 BstZI - CGGCCG BstZI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
31 Bsu36I - CCTNAGG Bsu36I
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
32 CfoI - GCGC CfoI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
33 ClaI - ATCGAT ClaI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
34 Csp45I - TTCGAA Csp45I
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
35 CspI - CGG(A/T)CCG CspI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
36 DdeI - CTNAG DdeI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
37 DpnI - GATC DpnI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
38 DraI - TTTAAA DraI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
39 EclHKI - GACNNNNNGTC EclHKI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
40 Eco47III - AGCGCT Eco47III
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
41 Eco52I - CGGCCG Eco52I
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
42 Eco72I - CACGTG Eco72I
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
43 EcoRI - GAATTC EcoRI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
44 EcoRV - GATATC EcoRV
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
45 HaeII - (A/G)GCGC(C/T) HaeII
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
46 HaeIII - GGCC HaeIII
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
47 HhaI - GCGC HhaI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
48 HincII - GT(C/T)(A/G)AC HincII
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
49 HindIII - AAGCTT HindIII
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
50 HinfI - GANTC HinfI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
51 HpaI - GTTAAC HpaI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
52 HpaII - CCGG HpaII
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
53 Hsp92I - G(A/G)CG(C/T)C Hsp92I
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
54 Hsp92II - CATG Hsp92II
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
55 I-PpoI - TAACTATGACTCTCTTAAGGTAGCCAAAT I-PpoI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
56 KpnI - GGTACC KpnI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
57 MboI - GATC MboI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
58 MluI - ACGCGT MluI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
59 MspA1I - C(A/C)GC(G/T)G MspA1I
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
60 MspI - CCGG MspI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
61 NaeI - GCCGGC NaeI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
62 NarI - GGCGCC NarI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
63 NciI - CC(C/G)GG NciI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
64 NcoI - CCATGG NcoI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
65 NdeI - CATATG NdeI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
66 NgoMIV - GCCGGC NgoMIV
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
67 NheI - GCTAGC NheI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
68 NotI - GCGGCCGC NotI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
69 NruI - TCGCGA NruI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
70 NsiI - ATGCAT NsiI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
71 PstI - CTGCAG PstI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
72 PvuI - CGATCG PvuI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
73 PvuII - CAGCTG PvuII
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
74 RsaI - GTAC RsaI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
75 SacI - GAGCTC SacI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
76 SacII - CCGCGG SacII
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
77 SalI - GTCGAC SalI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
78 Sau3AI - GATC Sau3AI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
79 Sau96I - GGNCC Sau96I
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
80 ScaI - AGTACT ScaI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
81 SfiI - GGCCNNNNNGGCC SfiI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
82 SgfI - GCGATCGC SgfI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
83 SinI - GG(A/T)CC SinI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
84 SmaI - CCCGGG SmaI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
85 SnaBI - TACGTA SnaBI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
86 SpeI - ACTAGT SpeI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
87 SphI - GCATGC SphI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
88 SspI - AATATT SspI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
89 StuI - AGGCCT StuI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
90 StyI - CC(A/T)(A/T)GG StyI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
91 TaqI - TCGA TaqI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
92 Tru9I - TTAA Tru9I
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
93 Tth111I - GACNNNGTC Tth111I
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
94 VspI - ATTAAT VspI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
95 XbaI - TCTAGA XbaI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
96 XhoI - CTCGAG XhoI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
97 XhoII - (A/G)GATC(C/T) XhoII
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
98 XmaI - CCCGGG XmaI
2c498d40ecde Uploaded
miller-lab
parents:
diff changeset
99 XmnI - GAANNNNTTC XmnI