Mercurial > repos > mingchen0919 > aurora_deseq2_site

view DESeq_results_03.Rmd @ 0:6f94b4b9de44 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload
author mingchen0919
date Tue, 27 Feb 2018 23:57:53 -0500
parents
children
line wrap: on
line source

---
output: html_document
---

```{r setup, include=FALSE, warning=FALSE, message=FALSE}
knitr::opts_chunk$set(
  echo = as.logical(opt$X_e),
  error = TRUE
)
```


# Histogram of p values

```{r}
hist(res$pvalue[res$baseMean > 1], breaks = 0:20/20,
     col = "grey50", border = "white", main = "",
     xlab = "Mean normalized count larger than 1")
```