diff _site.yml @ 11:507eec497730 draft

update fastqc site

--- a/_site.yml	Tue Aug 15 15:50:21 2017 -0400
+++ b/_site.yml	Tue Nov 07 16:52:24 2017 -0500
@@ -8,21 +8,29 @@
           icon: fa-home
           href: index.html
         - text: "Evaluation Overview"
-          href: 01_evaluation_overview.html
-        - text: "Evaluation Items"
+          href: x01_evaluation_overview.html
+        - text: "Evaluation by data module"
           menu:
-            - text: "Per Base Quality Scores"
-              href: 1_per_base_quality_scores.html
+            - text: "Per Base Sequence Quality"
+              href: x02_per_base_sequence_quality.html
+            - text: "Per Tile Sequence Quality"
+              href: x03_per_tile_sequence_quality.html
+            - text: "Per Sequence Quality Score"
+              href: x04_per_sequence_quality_score.html
+            - text: "Per Base Sequence Content"
+              href: x05_per_base_sequence_content.html
+            - text: "Per Sequence GC Content"
+              href: x06_per_sequence_gc_content.html
             - text: "Per Base N Content"
-              href: 2_per_base_N_content.html
-            - text: "Per Sequence Quality Scores"
-              href: 3_per_sequence_quality_scores.html
-            - text: "Per Sequence GC Content"
-              href: 4_per_sequence_GC_content.html
-            - text: "Per Base Sequence Content"
-              href: 5_per_base_sequence_content.html
-        - text: "Original FastQC Reports"
-          href: 02_fastqc_original_reports.html
+              href: x07_per_base_n_content.html
+            - text: "Sequence Length Distribution"
+              href: x08_sequence_length_distribution.html
+            - text: "Sequence Duplication Levels"
+              href: x09_sequence_duplication_levels.html
+            - text: "Adapter Content"
+              href: x10_adapter_content.html
+            - text: "Kmer Content"
+              href: x11_kmer_content.html
 output:
   html_document:
     theme: cosmo