Mercurial > repos > mingchen0919 > rmarkdown_mirdeep2

changeset 1:75e53be98c51 draft

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planemo upload for repository https://github.com/statonlab/docker-GRReport/tree/master/my_tools/rmarkdown_mirdeep2 commit 29e8b40899c71ca12fd07b2bb530b0ee65037588-dirty
author mingchen0919
date Tue, 08 Aug 2017 13:23:44 -0400
parents 963905bcb754
children 90207652b06a
files mirdeep2.xml mirdeep2_mapper.xml
diffstat 2 files changed, 0 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/mirdeep2.xml	Tue Aug 08 13:14:41 2017 -0400
+++ b/mirdeep2.xml	Tue Aug 08 13:23:44 2017 -0400
@@ -26,8 +26,6 @@
     </stdio>
     <command>
         <![CDATA[
-        ## Add tools to PATH
-        export PATH=/opt/R-3.2.5/bin:\$PATH &&
 
         Rscript '${__tool_directory__}/mirdeep2_render.R'
 
--- a/mirdeep2_mapper.xml	Tue Aug 08 13:14:41 2017 -0400
+++ b/mirdeep2_mapper.xml	Tue Aug 08 13:23:44 2017 -0400
@@ -26,8 +26,6 @@
     </stdio>
     <command>
         <![CDATA[
-        ## Add tools to PATH
-        export PATH=/opt/R-3.2.5/bin:\$PATH &&
 
         Rscript '${__tool_directory__}/mirdeep2_mapper_render.R'