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comparison strelka.xml @ 17:8260a4188b08

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solved conf_file.ini pb
author mini
date Wed, 01 Oct 2014 13:45:33 +0200
parents 024468e8638c
children 3c10d88b55ad
comparison
equal deleted inserted replaced
16:024468e8638c 17:8260a4188b08
111 <filter>output3_file_check == True</filter> 111 <filter>output3_file_check == True</filter>
112 </data> 112 </data>
113 <data format="vcf" name="output4_vcf" label="${tool.name} on ${on_string}(all.somatic.indels.vcf)" from_work_dir="StrelkaAnalysis/results/all.somatic.indels.vcf"> 113 <data format="vcf" name="output4_vcf" label="${tool.name} on ${on_string}(all.somatic.indels.vcf)" from_work_dir="StrelkaAnalysis/results/all.somatic.indels.vcf">
114 <filter>output4_file_check == True</filter> 114 <filter>output4_file_check == True</filter>
115 </data> 115 </data>
116 <data name="conf_file.ini" label="conf_file.ini" from_work_dir="StrelkaAnalysis/tmp/config.ini"> 116 <data format="tabular" name="conf_file.ini" label="conf_file.ini" from_work_dir="StrelkaAnalysis/config.ini">
117 <filter>conf_file_check == True</filter> 117 <filter>conf_file_check == True</filter>
118 </data> 118 </data>
119 <data format="bam" name="output5_bam" label="${tool.name} on ${on_string}(normal.realigned.bam)" from_work_dir="StrelkaAnalysis/realigned/normal.realigned.bam"> 119 <data format="bam" name="output5_bam" label="${tool.name} on ${on_string}(normal.realigned.bam)" from_work_dir="StrelkaAnalysis/realigned/normal.realigned.bam">
120 <filter>output5_file_check == True</filter> 120 <filter>output5_file_check == True</filter>
121 </data> 121 </data>