Mercurial > repos > mini > strelka

diff strelka.xml @ 17:8260a4188b08

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solved conf_file.ini pb
author mini
date Wed, 01 Oct 2014 13:45:33 +0200
parents 024468e8638c
children 3c10d88b55ad
line wrap: on
line diff
--- a/strelka.xml	Wed Oct 01 12:33:46 2014 +0200
+++ b/strelka.xml	Wed Oct 01 13:45:33 2014 +0200
@@ -113,7 +113,7 @@
     <data format="vcf" name="output4_vcf" label="${tool.name} on ${on_string}(all.somatic.indels.vcf)" from_work_dir="StrelkaAnalysis/results/all.somatic.indels.vcf">
       <filter>output4_file_check == True</filter>
     </data>
-    <data name="conf_file.ini" label="conf_file.ini" from_work_dir="StrelkaAnalysis/tmp/config.ini">
+    <data format="tabular" name="conf_file.ini" label="conf_file.ini" from_work_dir="StrelkaAnalysis/config.ini">
       <filter>conf_file_check == True</filter>
     </data>
     <data format="bam" name="output5_bam" label="${tool.name} on ${on_string}(normal.realigned.bam)" from_work_dir="StrelkaAnalysis/realigned/normal.realigned.bam">