annotate butterfly_crossplot.xml @ 0:af2cdd97a434 draft

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author mnhn65mo
date Mon, 13 Aug 2018 04:21:56 -0400
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1 <tool id="Butterfly_crossplot" name="Butterfly data analysis" version="0.1.0">
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2 <requirements>
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3 <requirement type="package" version="2.2.1">r-ggplot2</requirement>
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4 <requirement type="package" version="1.1_2">r-rcolorbrewer</requirement>
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5 </requirements>
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6 <command detect_errors="exit_code"><![CDATA[
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7 Rscript '$__tool_directory__/butterfly_crossplot.R' '$__tool_directory__/stat_bag.r' '$butterfly_db' '$__tool_directory__/code_couleurs.csv' '$function'
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8 ##'$__tool_directory__/BDD_PAPILLONS_2016.txt'
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9 ]]></command>
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10 <inputs>
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11 <param name="function" type="select" label="Chose your analyse">
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12 <option value="ggCompareLevel">Compare production methods</option>
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13 <option value="ggfiltre1niveau">Compare regions</option>
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14 <option value="gglocal">Compare local networks</option>
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15 </param>
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16 <param name="butterfly_db" type="data" format="csv,tabular" label="Butterfly datafile"/>
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17 </inputs>
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18 <outputs>
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19 <data format="png" name="ggCompareLevel" label="Compare production methods" from_work_dir="resultats/Papillons_CONDUITEPARCELLE_comparaison.png">
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20 <filter>function=='ggCompareLevel'</filter>
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21 </data>
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22 <collection type="list" name="output_ggfiltre" label="Compare regions">
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23 <discover_datasets pattern="__designation_and_ext__" visible="false" format="png" directory="resultats"/>
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24 <filter>function=='ggfiltre1niveau'</filter>
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25 </collection>
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26 <collection type="list" name="output_gglocal" label="Compare local network">
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27 <discover_datasets pattern="__designation_and_ext__" visible="false" format="png" directory="resultats"/>
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28 <filter>function=='gglocal'</filter>
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29 </collection>
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30 </outputs>
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31 <help><![CDATA[
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32 TODO: Fill in help.
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33 ]]></help>
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34 </tool>