Mercurial > repos > mnhn65mo > butterfly_analysis
diff butterfly_crossplot.xml @ 0:af2cdd97a434 draft
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author | mnhn65mo |
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date | Mon, 13 Aug 2018 04:21:56 -0400 |
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children | 9daba7983d38 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/butterfly_crossplot.xml Mon Aug 13 04:21:56 2018 -0400 @@ -0,0 +1,34 @@ +<tool id="Butterfly_crossplot" name="Butterfly data analysis" version="0.1.0"> + <requirements> + <requirement type="package" version="2.2.1">r-ggplot2</requirement> + <requirement type="package" version="1.1_2">r-rcolorbrewer</requirement> + </requirements> + <command detect_errors="exit_code"><![CDATA[ + Rscript '$__tool_directory__/butterfly_crossplot.R' '$__tool_directory__/stat_bag.r' '$butterfly_db' '$__tool_directory__/code_couleurs.csv' '$function' + ##'$__tool_directory__/BDD_PAPILLONS_2016.txt' + ]]></command> + <inputs> + <param name="function" type="select" label="Chose your analyse"> + <option value="ggCompareLevel">Compare production methods</option> + <option value="ggfiltre1niveau">Compare regions</option> + <option value="gglocal">Compare local networks</option> + </param> + <param name="butterfly_db" type="data" format="csv,tabular" label="Butterfly datafile"/> + </inputs> + <outputs> + <data format="png" name="ggCompareLevel" label="Compare production methods" from_work_dir="resultats/Papillons_CONDUITEPARCELLE_comparaison.png"> + <filter>function=='ggCompareLevel'</filter> + </data> + <collection type="list" name="output_ggfiltre" label="Compare regions"> + <discover_datasets pattern="__designation_and_ext__" visible="false" format="png" directory="resultats"/> + <filter>function=='ggfiltre1niveau'</filter> + </collection> + <collection type="list" name="output_gglocal" label="Compare local network"> + <discover_datasets pattern="__designation_and_ext__" visible="false" format="png" directory="resultats"/> + <filter>function=='gglocal'</filter> + </collection> + </outputs> + <help><![CDATA[ + TODO: Fill in help. + ]]></help> +</tool>