Mercurial > repos > modencode-dcc > spp_package
changeset 9:dfdaa943f855 draft
corrected created file path
| author | modencode-dcc |
|---|---|
| date | Wed, 06 Feb 2013 21:23:05 -0500 |
| parents | 2db63ab9b129 |
| children | c57381059179 |
| files | spp_wrapper.py |
| diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/spp_wrapper.py Fri Jan 18 19:01:39 2013 -0500 +++ b/spp_wrapper.py Wed Feb 06 21:23:05 2013 -0500 @@ -72,11 +72,11 @@ chip_name = os.path.basename(options['chip_file']) input_name = os.path.basename(options['input_file']) - created_narrow_peak = os.path.join( "/mnt/galaxyData/files/000", "%s_VS_%s.narrowPeak.gz" % (chip_name, input_name) ) + created_narrow_peak = os.path.join( tmp_dir, "%s_VS_%s.narrowPeak.gz" % (chip_name, input_name) ) if os.path.exists( created_narrow_peak ): shutil.move( created_narrow_peak, output_narrow_peak ) - created_region_peak = os.path.join( "/mnt/galaxyData/files/000", "%s_VS_%s.regionPeak.gz" % (chip_name, input_name) ) + created_region_peak = os.path.join( tmp_dir, "%s_VS_%s.regionPeak.gz" % (chip_name, input_name) ) if os.path.exists( created_region_peak ): shutil.move( created_region_peak, output_region_peak )