annotate TRTR @ 1:d734400388b1

Version 1.0 upload.
author mrvollger
date Thu, 11 Dec 2014 15:03:35 -0500
parents f4fa07be710a
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5 <!DOCTYPE html>
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6 <html lang="en" class="">
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7 <head prefix="og: http://ogp.me/ns# fb: http://ogp.me/ns/fb# object: http://ogp.me/ns/object# article: http://ogp.me/ns/article# profile: http://ogp.me/ns/profile#">
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8 <meta charset='utf-8'>
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9 <meta http-equiv="X-UA-Compatible" content="IE=edge">
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10 <meta http-equiv="Content-Language" content="en">
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13 <title>mvollger/TRTR ยท GitHub</title>
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14 <link rel="search" type="application/opensearchdescription+xml" href="/opensearch.xml" title="GitHub">
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15 <link rel="fluid-icon" href="https://github.com/fluidicon.png" title="GitHub">
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16 <link rel="apple-touch-icon" sizes="57x57" href="/apple-touch-icon-114.png">
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17 <link rel="apple-touch-icon" sizes="114x114" href="/apple-touch-icon-114.png">
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18 <link rel="apple-touch-icon" sizes="72x72" href="/apple-touch-icon-144.png">
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19 <link rel="apple-touch-icon" sizes="144x144" href="/apple-touch-icon-144.png">
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20 <meta property="fb:app_id" content="1401488693436528">
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22 <meta content="@github" name="twitter:site" /><meta content="summary" name="twitter:card" /><meta content="mvollger/TRTR" name="twitter:title" /><meta content="Contribute to TRTR development by creating an account on GitHub." name="twitter:description" /><meta content="https://avatars1.githubusercontent.com/u/6935283?v=3&amp;s=400" name="twitter:image:src" />
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23 <meta content="GitHub" property="og:site_name" /><meta content="object" property="og:type" /><meta content="https://avatars1.githubusercontent.com/u/6935283?v=3&amp;s=400" property="og:image" /><meta content="mvollger/TRTR" property="og:title" /><meta content="https://github.com/mvollger/TRTR" property="og:url" /><meta content="Contribute to TRTR development by creating an account on GitHub." property="og:description" />
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25 <meta name="browser-stats-url" content="/_stats">
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26 <link rel="assets" href="https://assets-cdn.github.com/">
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27 <link rel="conduit-xhr" href="https://ghconduit.com:25035">
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29 <meta name="pjax-timeout" content="1000">
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32 <meta name="msapplication-TileImage" content="/windows-tile.png">
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33 <meta name="msapplication-TileColor" content="#ffffff">
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34 <meta name="selected-link" value="repo_source" data-pjax-transient>
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35 <meta name="google-analytics" content="UA-3769691-2">
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1
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37 <meta content="collector.githubapp.com" name="octolytics-host" /><meta content="collector-cdn.github.com" name="octolytics-script-host" /><meta content="github" name="octolytics-app-id" /><meta content="8076FA06:670C:152B4A3:5489F897" name="octolytics-dimension-request_id" />
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39 <meta content="Rails, view, files#disambiguate" name="analytics-event" />
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43 <link rel="icon" type="image/x-icon" href="https://assets-cdn.github.com/favicon.ico">
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46 <meta content="authenticity_token" name="csrf-param" />
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49 <link href="https://assets-cdn.github.com/assets/github-c7f434a471766a748d862b4cb294526acd6901321d901cc64028f53af8490603.css" media="all" rel="stylesheet" type="text/css" />
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50 <link href="https://assets-cdn.github.com/assets/github2-d3255e3762ec73006730d22d2db05bd45c6ba29468f8808e238c160550ca87ef.css" media="all" rel="stylesheet" type="text/css" />
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55 <meta http-equiv="x-pjax-version" content="38cf36b78efb25a234c35bc9b920031d">
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58 <meta name="description" content="Contribute to TRTR development by creating an account on GitHub.">
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59 <meta name="go-import" content="github.com/mvollger/TRTR git https://github.com/mvollger/TRTR.git">
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60
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61 <meta content="6935283" name="octolytics-dimension-user_id" /><meta content="mvollger" name="octolytics-dimension-user_login" /><meta content="27889006" name="octolytics-dimension-repository_id" /><meta content="mvollger/TRTR" name="octolytics-dimension-repository_nwo" /><meta content="true" name="octolytics-dimension-repository_public" /><meta content="false" name="octolytics-dimension-repository_is_fork" /><meta content="27889006" name="octolytics-dimension-repository_network_root_id" /><meta content="mvollger/TRTR" name="octolytics-dimension-repository_network_root_nwo" />
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62 <link href="https://github.com/mvollger/TRTR/commits/master.atom" rel="alternate" title="Recent Commits to TRTR:master" type="application/atom+xml">
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63
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64 </head>
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67 <body class="logged_out env-production vis-public">
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68 <a href="#start-of-content" tabindex="1" class="accessibility-aid js-skip-to-content">Skip to content</a>
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69 <div class="wrapper">
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77 <div class="header header-logged-out" role="banner">
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78 <div class="container clearfix">
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80 <a class="header-logo-wordmark" href="https://github.com/" ga-data-click="(Logged out) Header, go to homepage, icon:logo-wordmark">
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81 <span class="mega-octicon octicon-logo-github"></span>
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82 </a>
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83
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84 <div class="header-actions" role="navigation">
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85 <a class="button primary" href="/join" data-ga-click="(Logged out) Header, clicked Sign up, text:sign-up">Sign up</a>
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86 <a class="button" href="/login?return_to=%2Fmvollger%2FTRTR" data-ga-click="(Logged out) Header, clicked Sign in, text:sign-in">Sign in</a>
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87 </div>
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88
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89 <div class="site-search repo-scope js-site-search" role="search">
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90 <form accept-charset="UTF-8" action="/mvollger/TRTR/search" class="js-site-search-form" data-global-search-url="/search" data-repo-search-url="/mvollger/TRTR/search" method="get"><div style="margin:0;padding:0;display:inline"><input name="utf8" type="hidden" value="&#x2713;" /></div>
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91 <input type="text"
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92 class="js-site-search-field is-clearable"
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93 data-hotkey="s"
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94 name="q"
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95 placeholder="Search"
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96 data-global-scope-placeholder="Search GitHub"
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97 data-repo-scope-placeholder="Search"
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98 tabindex="1"
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99 autocapitalize="off">
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100 <div class="scope-badge">This repository</div>
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101 </form>
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102 </div>
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103
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104 <ul class="header-nav left" role="navigation">
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105 <li class="header-nav-item">
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106 <a class="header-nav-link" href="/explore" data-ga-click="(Logged out) Header, go to explore, text:explore">Explore</a>
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107 </li>
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108 <li class="header-nav-item">
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109 <a class="header-nav-link" href="/features" data-ga-click="(Logged out) Header, go to features, text:features">Features</a>
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110 </li>
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111 <li class="header-nav-item">
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112 <a class="header-nav-link" href="https://enterprise.github.com/" data-ga-click="(Logged out) Header, go to enterprise, text:enterprise">Enterprise</a>
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113 </li>
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114 <li class="header-nav-item">
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115 <a class="header-nav-link" href="/blog" data-ga-click="(Logged out) Header, go to blog, text:blog">Blog</a>
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116 </li>
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117 </ul>
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118
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119 </div>
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120 </div>
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123
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124 <div id="start-of-content" class="accessibility-aid"></div>
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125 <div class="site" itemscope itemtype="http://schema.org/WebPage">
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126 <div id="js-flash-container">
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127
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128 </div>
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129 <div class="pagehead repohead instapaper_ignore readability-menu">
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130 <div class="container">
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131
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132 <ul class="pagehead-actions">
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134
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135 <li>
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136 <a href="/login?return_to=%2Fmvollger%2FTRTR"
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137 class="minibutton with-count star-button tooltipped tooltipped-n"
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138 aria-label="You must be signed in to star a repository" rel="nofollow">
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139 <span class="octicon octicon-star"></span>
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140 Star
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141 </a>
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142
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143 <a class="social-count js-social-count" href="/mvollger/TRTR/stargazers">
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144 0
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145 </a>
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146
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147 </li>
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148
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149 <li>
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150 <a href="/login?return_to=%2Fmvollger%2FTRTR"
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151 class="minibutton with-count js-toggler-target fork-button tooltipped tooltipped-n"
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152 aria-label="You must be signed in to fork a repository" rel="nofollow">
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153 <span class="octicon octicon-repo-forked"></span>
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154 Fork
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155 </a>
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156 <a href="/mvollger/TRTR/network" class="social-count">
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157 0
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158 </a>
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159 </li>
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160 </ul>
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161
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162 <h1 itemscope itemtype="http://data-vocabulary.org/Breadcrumb" class="entry-title public">
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163 <span class="mega-octicon octicon-repo"></span>
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164 <span class="author"><a href="/mvollger" class="url fn" itemprop="url" rel="author"><span itemprop="title">mvollger</span></a></span><!--
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165 --><span class="path-divider">/</span><!--
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166 --><strong><a href="/mvollger/TRTR" class="js-current-repository" data-pjax="#js-repo-pjax-container">TRTR</a></strong>
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167
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168 <span class="page-context-loader">
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169 <img alt="" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />
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170 </span>
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171
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172 </h1>
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mrvollger
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173 </div><!-- /.container -->
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mrvollger
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174 </div><!-- /.repohead -->
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175
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mrvollger
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176 <div class="container">
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mrvollger
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177 <div class="repository-with-sidebar repo-container new-discussion-timeline with-full-navigation ">
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mrvollger
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178 <div class="repository-sidebar clearfix">
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mrvollger
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179
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mrvollger
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180 <nav class="sunken-menu repo-nav js-repo-nav js-sidenav-container-pjax js-octicon-loaders"
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mrvollger
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181 role="navigation"
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mrvollger
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182 data-pjax="#js-repo-pjax-container"
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mrvollger
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183 data-issue-count-url="/mvollger/TRTR/issues/counts">
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mrvollger
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184 <ul class="sunken-menu-group">
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mrvollger
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185 <li class="tooltipped tooltipped-w" aria-label="Code">
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mrvollger
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186 <a href="/mvollger/TRTR" aria-label="Code" class="selected js-selected-navigation-item sunken-menu-item" data-hotkey="g c" data-selected-links="repo_source repo_downloads repo_commits repo_releases repo_tags repo_branches /mvollger/TRTR">
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mrvollger
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187 <span class="octicon octicon-code"></span> <span class="full-word">Code</span>
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mrvollger
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188 <img alt="" class="mini-loader" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />
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189 </a> </li>
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190
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191 <li class="tooltipped tooltipped-w" aria-label="Issues">
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192 <a href="/mvollger/TRTR/issues" aria-label="Issues" class="js-selected-navigation-item sunken-menu-item" data-hotkey="g i" data-selected-links="repo_issues repo_labels repo_milestones /mvollger/TRTR/issues">
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mrvollger
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193 <span class="octicon octicon-issue-opened"></span> <span class="full-word">Issues</span>
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mrvollger
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194 <span class="js-issue-replace-counter"></span>
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mrvollger
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195 <img alt="" class="mini-loader" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />
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196 </a> </li>
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197
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198 <li class="tooltipped tooltipped-w" aria-label="Pull Requests">
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mrvollger
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199 <a href="/mvollger/TRTR/pulls" aria-label="Pull Requests" class="js-selected-navigation-item sunken-menu-item" data-hotkey="g p" data-selected-links="repo_pulls /mvollger/TRTR/pulls">
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mrvollger
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200 <span class="octicon octicon-git-pull-request"></span> <span class="full-word">Pull Requests</span>
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mrvollger
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201 <span class="js-pull-replace-counter"></span>
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mrvollger
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202 <img alt="" class="mini-loader" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />
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203 </a> </li>
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204
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205
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mrvollger
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206 </ul>
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mrvollger
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207 <div class="sunken-menu-separator"></div>
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mrvollger
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208 <ul class="sunken-menu-group">
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mrvollger
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209
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mrvollger
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210 <li class="tooltipped tooltipped-w" aria-label="Pulse">
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mrvollger
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211 <a href="/mvollger/TRTR/pulse" aria-label="Pulse" class="js-selected-navigation-item sunken-menu-item" data-selected-links="pulse /mvollger/TRTR/pulse">
f4fa07be710a Version 1.0 upload.
mrvollger
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212 <span class="octicon octicon-pulse"></span> <span class="full-word">Pulse</span>
f4fa07be710a Version 1.0 upload.
mrvollger
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213 <img alt="" class="mini-loader" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />
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214 </a> </li>
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215
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mrvollger
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216 <li class="tooltipped tooltipped-w" aria-label="Graphs">
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mrvollger
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217 <a href="/mvollger/TRTR/graphs" aria-label="Graphs" class="js-selected-navigation-item sunken-menu-item" data-selected-links="repo_graphs repo_contributors /mvollger/TRTR/graphs">
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218 <span class="octicon octicon-graph"></span> <span class="full-word">Graphs</span>
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mrvollger
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219 <img alt="" class="mini-loader" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />
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220 </a> </li>
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221 </ul>
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222
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223
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224 </nav>
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225
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mrvollger
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226 <div class="only-with-full-nav">
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227
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228
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mrvollger
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229 <div class="clone-url open"
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mrvollger
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230 data-protocol-type="http"
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mrvollger
parents:
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231 data-url="/users/set_protocol?protocol_selector=http&amp;protocol_type=clone">
f4fa07be710a Version 1.0 upload.
mrvollger
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diff changeset
232 <h3><span class="text-emphasized">HTTPS</span> clone URL</h3>
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mrvollger
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diff changeset
233 <div class="input-group js-zeroclipboard-container">
f4fa07be710a Version 1.0 upload.
mrvollger
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diff changeset
234 <input type="text" class="input-mini input-monospace js-url-field js-zeroclipboard-target"
f4fa07be710a Version 1.0 upload.
mrvollger
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235 value="https://github.com/mvollger/TRTR.git" readonly="readonly">
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mrvollger
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236 <span class="input-group-button">
f4fa07be710a Version 1.0 upload.
mrvollger
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237 <button aria-label="Copy to clipboard" class="js-zeroclipboard minibutton zeroclipboard-button" data-copied-hint="Copied!" type="button"><span class="octicon octicon-clippy"></span></button>
f4fa07be710a Version 1.0 upload.
mrvollger
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238 </span>
f4fa07be710a Version 1.0 upload.
mrvollger
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239 </div>
f4fa07be710a Version 1.0 upload.
mrvollger
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240 </div>
f4fa07be710a Version 1.0 upload.
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241
f4fa07be710a Version 1.0 upload.
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242
f4fa07be710a Version 1.0 upload.
mrvollger
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243 <div class="clone-url "
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mrvollger
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244 data-protocol-type="subversion"
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mrvollger
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245 data-url="/users/set_protocol?protocol_selector=subversion&amp;protocol_type=clone">
f4fa07be710a Version 1.0 upload.
mrvollger
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diff changeset
246 <h3><span class="text-emphasized">Subversion</span> checkout URL</h3>
f4fa07be710a Version 1.0 upload.
mrvollger
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diff changeset
247 <div class="input-group js-zeroclipboard-container">
f4fa07be710a Version 1.0 upload.
mrvollger
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diff changeset
248 <input type="text" class="input-mini input-monospace js-url-field js-zeroclipboard-target"
f4fa07be710a Version 1.0 upload.
mrvollger
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249 value="https://github.com/mvollger/TRTR" readonly="readonly">
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mrvollger
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250 <span class="input-group-button">
f4fa07be710a Version 1.0 upload.
mrvollger
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251 <button aria-label="Copy to clipboard" class="js-zeroclipboard minibutton zeroclipboard-button" data-copied-hint="Copied!" type="button"><span class="octicon octicon-clippy"></span></button>
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252 </span>
f4fa07be710a Version 1.0 upload.
mrvollger
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253 </div>
f4fa07be710a Version 1.0 upload.
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254 </div>
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255
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256
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257
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mrvollger
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258 <p class="clone-options">You can clone with
f4fa07be710a Version 1.0 upload.
mrvollger
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259 <a href="#" class="js-clone-selector" data-protocol="http">HTTPS</a> or <a href="#" class="js-clone-selector" data-protocol="subversion">Subversion</a>.
f4fa07be710a Version 1.0 upload.
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260 <a href="https://help.github.com/articles/which-remote-url-should-i-use" class="help tooltipped tooltipped-n" aria-label="Get help on which URL is right for you.">
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mrvollger
parents:
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261 <span class="octicon octicon-question"></span>
f4fa07be710a Version 1.0 upload.
mrvollger
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262 </a>
f4fa07be710a Version 1.0 upload.
mrvollger
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263 </p>
f4fa07be710a Version 1.0 upload.
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264
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265
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266
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mrvollger
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267 <a href="/mvollger/TRTR/archive/master.zip"
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
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268 class="minibutton sidebar-button"
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mrvollger
parents:
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269 aria-label="Download the contents of mvollger/TRTR as a zip file"
f4fa07be710a Version 1.0 upload.
mrvollger
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270 title="Download the contents of mvollger/TRTR as a zip file"
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
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271 rel="nofollow">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
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272 <span class="octicon octicon-cloud-download"></span>
f4fa07be710a Version 1.0 upload.
mrvollger
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273 Download ZIP
f4fa07be710a Version 1.0 upload.
mrvollger
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274 </a>
f4fa07be710a Version 1.0 upload.
mrvollger
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275 </div>
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mrvollger
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276 </div><!-- /.repository-sidebar -->
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mrvollger
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277
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mrvollger
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278 <div id="js-repo-pjax-container" class="repository-content context-loader-container" data-pjax-container>
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mrvollger
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279
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mrvollger
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280 <span id="js-show-full-navigation"></span>
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mrvollger
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281
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mrvollger
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282 <div class="repository-meta js-details-container ">
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283
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284
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285
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286 </div>
f4fa07be710a Version 1.0 upload.
mrvollger
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287
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mrvollger
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288 <div class="overall-summary overall-summary-bottomless">
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289
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mrvollger
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290 <div class="stats-switcher-viewport js-stats-switcher-viewport">
f4fa07be710a Version 1.0 upload.
mrvollger
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291 <div class="stats-switcher-wrapper">
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mrvollger
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292 <ul class="numbers-summary">
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mrvollger
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293 <li class="commits">
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mrvollger
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294 <a data-pjax href="/mvollger/TRTR/commits/master">
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mrvollger
parents:
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295 <span class="octicon octicon-history"></span>
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mrvollger
parents:
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296 <span class="num text-emphasized">
f4fa07be710a Version 1.0 upload.
mrvollger
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297 2
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mrvollger
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298 </span>
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mrvollger
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299 commits
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mrvollger
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300 </a>
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mrvollger
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301 </li>
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mrvollger
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302 <li>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
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303 <a data-pjax href="/mvollger/TRTR/branches">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
304 <span class="octicon octicon-git-branch"></span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
305 <span class="num text-emphasized">
f4fa07be710a Version 1.0 upload.
mrvollger
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306 1
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mrvollger
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307 </span>
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mrvollger
parents:
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308 branch
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mrvollger
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309 </a>
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mrvollger
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310 </li>
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mrvollger
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311
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mrvollger
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312 <li>
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mrvollger
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313 <a data-pjax href="/mvollger/TRTR/releases">
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mrvollger
parents:
diff changeset
314 <span class="octicon octicon-tag"></span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
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315 <span class="num text-emphasized">
f4fa07be710a Version 1.0 upload.
mrvollger
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316 0
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mrvollger
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317 </span>
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mrvollger
parents:
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318 releases
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mrvollger
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319 </a>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
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320 </li>
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mrvollger
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321
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mrvollger
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322 <li>
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mrvollger
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323
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mrvollger
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324 <a href="/mvollger/TRTR/graphs/contributors">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
325 <span class="octicon octicon-organization"></span>
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mrvollger
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326 <span class="num text-emphasized">
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mrvollger
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327 1
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mrvollger
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328 </span>
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mrvollger
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329 contributor
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mrvollger
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330 </a>
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mrvollger
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331 </li>
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mrvollger
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332 </ul>
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mrvollger
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333
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mrvollger
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334 <div class="repository-lang-stats">
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mrvollger
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diff changeset
335 <ol class="repository-lang-stats-numbers">
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mrvollger
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336 <li>
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mrvollger
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337 <a href="/mvollger/TRTR/search?l=c">
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mrvollger
parents:
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338 <span class="color-block language-color" style="background-color:#555;"></span>
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mrvollger
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339 <span class="lang">C</span>
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mrvollger
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340 <span class="percent">100%</span>
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mrvollger
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diff changeset
341 </a>
f4fa07be710a Version 1.0 upload.
mrvollger
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342 </li>
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mrvollger
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343 </ol>
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mrvollger
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344 </div>
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345 </div>
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346 </div>
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347
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348 </div>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
349
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
350 <div class="tooltipped tooltipped-s" aria-label="Show language statistics">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
351 <a href="#"
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
352 class="repository-lang-stats-graph js-toggle-lang-stats"
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
353 style="background-color:#555">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
354 <span class="language-color" style="width:100%; background-color:#555;" itemprop="keywords">C</span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
355 </a>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
356 </div>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
357
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
358 <include-fragment src="/mvollger/TRTR/show_partial?partial=recently_touched_branches_list"></include-fragment>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
359
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
360 <div class="file-navigation in-mid-page">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
361 <a href="/mvollger/TRTR/find/master"
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
362 class="js-show-file-finder minibutton empty-icon tooltipped tooltipped-s right"
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
363 data-pjax
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
364 data-hotkey="t"
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
365 aria-label="Quickly jump between files">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
366 <span class="octicon octicon-list-unordered"></span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
367 </a>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
368 <a href="/mvollger/TRTR/compare" aria-label="Compare, review, create a pull request" class="minibutton primary tooltipped tooltipped-s left compare-button" aria-label="Compare &amp; review" data-pjax>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
369 <span class="octicon octicon-git-compare"></span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
370 </a>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
371
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
372
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
373 <div class="select-menu js-menu-container js-select-menu left">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
374 <span class="minibutton select-menu-button js-menu-target css-truncate" data-hotkey="w"
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
375 data-master-branch="master"
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
376 data-ref="master"
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
377 title="master"
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
378 role="button" aria-label="Switch branches or tags" tabindex="0" aria-haspopup="true">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
379 <span class="octicon octicon-git-branch"></span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
380 <i>branch:</i>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
381 <span class="js-select-button css-truncate-target">master</span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
382 </span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
383
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
384 <div class="select-menu-modal-holder js-menu-content js-navigation-container" data-pjax aria-hidden="true">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
385
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
386 <div class="select-menu-modal">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
387 <div class="select-menu-header">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
388 <span class="select-menu-title">Switch branches/tags</span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
389 <span class="octicon octicon-x js-menu-close" role="button" aria-label="Close"></span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
390 </div> <!-- /.select-menu-header -->
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
391
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
392 <div class="select-menu-filters">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
393 <div class="select-menu-text-filter">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
394 <input type="text" aria-label="Filter branches/tags" id="context-commitish-filter-field" class="js-filterable-field js-navigation-enable" placeholder="Filter branches/tags">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
395 </div>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
396 <div class="select-menu-tabs">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
397 <ul>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
398 <li class="select-menu-tab">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
399 <a href="#" data-tab-filter="branches" class="js-select-menu-tab">Branches</a>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
400 </li>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
401 <li class="select-menu-tab">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
402 <a href="#" data-tab-filter="tags" class="js-select-menu-tab">Tags</a>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
403 </li>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
404 </ul>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
405 </div><!-- /.select-menu-tabs -->
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
406 </div><!-- /.select-menu-filters -->
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
407
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
408 <div class="select-menu-list select-menu-tab-bucket js-select-menu-tab-bucket" data-tab-filter="branches">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
409
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
410 <div data-filterable-for="context-commitish-filter-field" data-filterable-type="substring">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
411
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
412
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
413 <div class="select-menu-item js-navigation-item selected">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
414 <span class="select-menu-item-icon octicon octicon-check"></span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
415 <a href="/mvollger/TRTR/tree/master"
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
416 data-name="master"
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
417 data-skip-pjax="true"
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
418 rel="nofollow"
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
419 class="js-navigation-open select-menu-item-text css-truncate-target"
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
420 title="master">master</a>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
421 </div> <!-- /.select-menu-item -->
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
422 </div>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
423
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
424 <div class="select-menu-no-results">Nothing to show</div>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
425 </div> <!-- /.select-menu-list -->
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
426
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
427 <div class="select-menu-list select-menu-tab-bucket js-select-menu-tab-bucket" data-tab-filter="tags">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
428 <div data-filterable-for="context-commitish-filter-field" data-filterable-type="substring">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
429
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
430
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
431 </div>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
432
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
433 <div class="select-menu-no-results">Nothing to show</div>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
434 </div> <!-- /.select-menu-list -->
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
435
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
436 </div> <!-- /.select-menu-modal -->
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
437 </div> <!-- /.select-menu-modal-holder -->
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
438 </div> <!-- /.select-menu -->
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
439
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
440
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
441
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
442 <div class="breadcrumb"><span class='repo-root js-repo-root'><span itemscope="" itemtype="http://data-vocabulary.org/Breadcrumb"><a href="/mvollger/TRTR" class="" data-branch="master" data-direction="back" data-pjax="true" itemscope="url"><span itemprop="title">TRTR</span></a></span></span><span class="separator">/</span><form action="/login?return_to=%2Fmvollger%2FTRTR" aria-label="Sign in to make or propose changes" class="js-new-blob-form tooltipped tooltipped-e new-file-link" method="post"><span aria-label="Sign in to make or propose changes" class="js-new-blob-submit octicon octicon-plus" data-test-id="create-new-git-file" role="button"></span></form></div>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
443 </div>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
444
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
445
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
446
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
447
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
448 <div class="commit commit-tease js-details-container" >
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
449 <p class="commit-title ">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
450 <a href="/mvollger/TRTR/commit/18ed489cf4214dad15282176452bb12ce7d91e6e" class="message" data-pjax="true" title="adding read me file">adding read me file</a>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
451
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
452 </p>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
453 <div class="commit-meta">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
454 <button aria-label="Copy SHA" class="js-zeroclipboard zeroclipboard-link" data-clipboard-text="18ed489cf4214dad15282176452bb12ce7d91e6e" data-copied-hint="Copied!" type="button"><span class="octicon octicon-clippy"></span></button>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
455 <a href="/mvollger/TRTR/commit/18ed489cf4214dad15282176452bb12ce7d91e6e" class="sha-block" data-pjax>latest commit <span class="sha">18ed489cf4</span></a>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
456
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
457 <div class="authorship">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
458 <img alt="Mitchell Robert Vollger" class="avatar" data-user="6935283" height="20" src="https://avatars1.githubusercontent.com/u/6935283?v=3&amp;s=40" width="20" />
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
459 <span class="author-name"><a href="/mvollger" rel="author">mvollger</a></span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
460 authored <time class="updated" datetime="2014-12-11T19:58:37Z" is="relative-time">Dec 11, 2014</time>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
461
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
462 </div>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
463 </div>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
464 </div>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
465
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
466
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
467 <div class="file-wrap">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
468
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
469 <table class="files" data-pjax>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
470
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
471
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
472 <tbody>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
473 <tr class="warning include-fragment-error">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
474 <td class="icon"><span class="octicon octicon-alert"></span></td>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
475 <td class="content" colspan="3">Failed to load latest commit information.</td>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
476 </tr>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
477
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
478 <tr>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
479 <td class="icon">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
480 <span class="octicon octicon-file-directory"></span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
481 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
482 </td>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
483 <td class="content">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
484 <span class="css-truncate css-truncate-target"><a href="/mvollger/TRTR/tree/master/test-data" class="js-directory-link" id="24346e1b50066607059af36e3b684b24-64040d5e28d23bf856cc984baa54d429d95fc7c7" title="test-data">test-data</a></span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
485 </td>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
486 <td class="message">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
487 <span class="css-truncate css-truncate-target">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
488 <a href="/mvollger/TRTR/commit/4b01881bee84344a00dda0a52e4d8f61f6817e08" class="message" data-pjax="true" title="This is version 1.00 of TRTR">This is version 1.00 of TRTR</a>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
489 </span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
490 </td>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
491 <td class="age">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
492 <span class="css-truncate css-truncate-target"><time datetime="2014-12-11T19:47:00Z" is="time-ago">Dec 11, 2014</time></span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
493 </td>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
494 </tr>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
495 <tr>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
496 <td class="icon">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
497 <span class="octicon octicon-file-text"></span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
498 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
499 </td>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
500 <td class="content">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
501 <span class="css-truncate css-truncate-target"><a href="/mvollger/TRTR/blob/master/README.md" class="js-directory-link" id="04c6e90faac2675aa89e2176d2eec7d8-1078740a0afb61b2ac8a8928fae3c4f467eaf7d3" title="README.md">README.md</a></span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
502 </td>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
503 <td class="message">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
504 <span class="css-truncate css-truncate-target">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
505 <a href="/mvollger/TRTR/commit/18ed489cf4214dad15282176452bb12ce7d91e6e" class="message" data-pjax="true" title="adding read me file">adding read me file</a>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
506 </span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
507 </td>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
508 <td class="age">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
509 <span class="css-truncate css-truncate-target"><time datetime="2014-12-11T19:58:37Z" is="time-ago">Dec 11, 2014</time></span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
510 </td>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
511 </tr>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
512 <tr>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
513 <td class="icon">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
514 <span class="octicon octicon-file-text"></span>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
515 <img alt="" class="spinner" height="16" src="https://assets-cdn.github.com/images/spinners/octocat-spinner-32.gif" width="16" />
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
516 </td>
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
517 <td class="content">
f4fa07be710a Version 1.0 upload.
mrvollger
parents:
diff changeset
518 <span class="css-truncate css-truncate-target"><a href="/mvollger/TRTR/blob/master/trtr" class="js-directory-link" id="df09e6b25ae335febd8ba69ee7daa07b-b1f0986d238b8f2bf2a57ba23814641c1a3726bd" title="trtr">trtr</a></span>
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526 <span class="css-truncate css-truncate-target"><time datetime="2014-12-11T19:47:00Z" is="time-ago">Dec 11, 2014</time></span>
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533 </td>
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535 <span class="css-truncate css-truncate-target"><a href="/mvollger/TRTR/blob/master/trtr.c" class="js-directory-link" id="3f948a8def2551323bf8ad1ba9dd2957-b5e365802398ae2a924593aab6bf86237ea269c0" title="trtr.c">trtr.c</a></span>
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536 </td>
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553 </td>
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561 </td>
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563 </tbody>
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565
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566 </div>
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567
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568
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569 <div id="readme" class="boxed-group flush clearfix announce instapaper_body md">
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572 README.md
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573 </h3>
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574
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575 <article class="markdown-body entry-content" itemprop="mainContentOfPage"><p>This tool removes tandem repeats from ends of unaligned sequencing reads (leaving one copy). This prevents reads that don't span the repeated region from overlapping and leading to innaccurate SNPs calls.</p>
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576
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577 <p>The maximimum repeat length is adjustable (use 1 to trim only homopolymers).</p>
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578
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579 <p>The "aggressive" option should not be touched in general. Setting to 0 will prevent the program from trimming to exactly 1 copy of the repeat, instead leaving between 1 and 2 copies.</p>
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580
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581 <p>This could also be a useful first step before assembly. More testing needs to be done.</p>
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582 </article>
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584
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585
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587
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593
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604 <li><a href="/about">About</a></li>
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605
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606 </ul>
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658