Mercurial > repos > mvdbeek > docker_scriptrunner
comparison dockerfiles/r-bioperl-python/Dockerfile @ 0:21d312776891 draft
planemo upload for repository https://github.com/mvdbeek/docker_scriptrunner/ commit 30f8264cdd67d40dec8acde6407f32152e6a29c1-dirty
| author | mvdbeek |
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| date | Sat, 09 Jul 2016 16:57:13 -0400 |
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| -1:000000000000 | 0:21d312776891 |
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| 1 # Script runner base image | |
| 2 # | |
| 3 # VERSION 0.3 | |
| 4 # This Dockerfile is the base system for executing scripts with the docker scriptrunner. | |
| 5 | |
| 6 FROM artbio/scriptrunner | |
| 7 | |
| 8 MAINTAINER Marius van den Beek, m.vandenbeek@gmail.com | |
| 9 | |
| 10 USER root | |
| 11 RUN su - galaxy -c 'bash -c ". /home/galaxy/conda/bin/activate default && \ | |
| 12 conda install -y ncurses biopython perl-bioperl bedtools bioconductor-deseq2 bioconductor-edger numpy scipy r-reshape"' && \ | |
| 13 chown -R galaxy:users /home/galaxy && chmod g=rwx /home/galaxy |