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annotate test-data/pathways-for-disease.tsv @ 9:5fa1f0ca69cc draft default tip

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planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
author nathandunn
date Sun, 25 Sep 2016 21:59:32 -0400
parents 61d8060bf2ed
children
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5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
diff changeset
1 KEGG-path:map00140 Steroid hormone biosynthesis RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
diff changeset
2 KEGG-path:map00830 Retinol metabolism RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
diff changeset
3 REACT:116125 Disease RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
diff changeset
4 KEGG-path:map00514 Other types of O-glycan biosynthesis RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 2
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5 KEGG-path:map00860 Porphyrin and chlorophyll metabolism RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
diff changeset
6 REACT:111102 Signal Transduction RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213|ECO:0000213|ECO:0000213 combinatorial evidence used in automatic assertion|combinatorial evidence used in automatic assertion|combinatorial evidence used in automatic assertion PMID:21326311|PMID:23406172|PMID:25670933 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 2
diff changeset
7 KEGG-path:map04080 Neuroactive ligand-receptor interaction RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:24058526 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
diff changeset
8 KEGG-path:map05323 Rheumatoid arthritis RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
diff changeset
9 KEGG-path:map00982 Drug metabolism - cytochrome P450 RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
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10 KEGG-path:map02010 ABC transporters RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:24058526 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
diff changeset
11 KEGG-path:map04976 Bile secretion RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:24058526 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
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12 KEGG-path:map04966 Collecting duct acid secretion RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
diff changeset
13 REACT:111217 Metabolism RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213|ECO:0000213 combinatorial evidence used in automatic assertion|combinatorial evidence used in automatic assertion PMID:24058526|PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
diff changeset
14 KEGG-path:map05152 Tuberculosis RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
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15 REACT:R-HSA-1989781 PPARA activates gene expression RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000304|ECO:0000213 traceable author statement used in manual assertion|combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/reactome.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
diff changeset
16 KEGG-path:map00053 Ascorbate and aldarate metabolism RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
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17 KEGG-path:map00040 Pentose and glucuronate interconversions RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
diff changeset
18 REACT:71 Gene Expression RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:24058526 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
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19 KEGG-path:map00980 Metabolism of xenobiotics by cytochrome P450 RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
diff changeset
20 KEGG-path:map01100 Metabolic pathways RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213|ECO:0000213 combinatorial evidence used in automatic assertion|combinatorial evidence used in automatic assertion PMID:21326311|PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
diff changeset
21 KEGG-path:map04144 Endocytosis RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:25670933 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 2
diff changeset
22 KEGG-path:map04740 Olfactory transduction RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:23406172 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 2
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23 KEGG-path:map04145 Phagosome RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
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24 KEGG-path:map00500 Starch and sucrose metabolism RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
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25 KEGG-path:map04142 Lysosome RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 2
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26 REACT:15518 Transmembrane transport of small molecules RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
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27 KEGG-path:map05120 Epithelial cell signaling in Helicobacter pylori infection RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
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28 KEGG-path:map00983 Drug metabolism - other enzymes RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
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29 KEGG-path:map00190 Oxidative phosphorylation RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
5fa1f0ca69cc planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
nathandunn
parents: 7
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30 KEGG-path:map05110 Vibrio cholerae infection RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred