view test-data/genes-for-phenotype.tsv @ 9:5fa1f0ca69cc draft default tip

planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
author nathandunn
date Sun, 25 Sep 2016 21:59:32 -0400
parents 61d8060bf2ed
children
line wrap: on
line source

NCBIGene:26058	GIGYF2	NCBITaxon:9606	Homo sapiens			HP:0002548	Parkinsonism with favorable response to dopaminergic medication	ECO:0000269|ECO:0000220	experimental evidence used in manual assertion|sequencing assay evidence	PMID:18358451	http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/hpoa.ttl	inferred
NCBIGene:7054	TH	NCBITaxon:9606	Homo sapiens			HP:0002548	Parkinsonism with favorable response to dopaminergic medication	ECO:0000304|ECO:0000322|ECO:0000220	traceable author statement used in manual assertion|imported manually asserted information used in automatic assertion|sequencing assay evidence	PMID:20198643|PMID:10407773|PMID:11281275|PMID:11246459|PMID:7814018|PMID:8817341|PMID:11246459|PMID:11246459|PMID:11246459|PMID:9235905|PMID:9732974|PMID:17696123|PMID:9732974|PMID:24753243|PMID:10407773|PMID:9703425|PMID:10407773|PMID:8528210|PMID:10585338|PMID:10407773|PMID:20430833	http://data.monarchinitiative.org/ttl/orphanet.ttl|http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/hpoa.ttl	inferred
NCBIGene:27429	HTRA2	NCBITaxon:9606	Homo sapiens			HP:0002548	Parkinsonism with favorable response to dopaminergic medication	ECO:0000304|ECO:0000220	traceable author statement used in manual assertion|sequencing assay evidence		http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/hpoa.ttl	inferred
NCBIGene:120892	LRRK2	NCBITaxon:9606	Homo sapiens			HP:0002548	Parkinsonism with favorable response to dopaminergic medication	ECO:0000220|ECO:0000501	sequencing assay evidence|evidence used in automatic assertion	PMID:17215492|PMID:16401756|PMID:23075850|PMID:19283415|PMID:17353388|PMID:17050822|PMID:19020907|PMID:20008657|PMID:18591067|PMID:16172858|PMID:18981379|PMID:15541309|PMID:16436782|PMID:16269541|PMID:9276200|PMID:15680457|PMID:17060595|PMID:19308469|PMID:15726496|PMID:16960813|PMID:15541309|PMID:16966502|PMID:19667187|PMID:15880653|PMID:15852371|PMID:16436781|PMID:16269541|PMID:16533964|PMID:15811455|PMID:16321986|PMID:15541308|PMID:18704525|PMID:16157909|PMID:16533964|PMID:15680456|PMID:16003110|PMID:15541308|PMID:15541309|PMID:15541309|PMID:19020907|PMID:15929036|PMID:17060595|PMID:21115957|PMID:16240353|PMID:16728648|PMID:16003110|PMID:7898705|PMID:16311269|PMID:15680455|PMID:16145815|PMID:17938369|PMID:15732108	http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/hpoa.ttl	inferred
NCBIGene:291	SLC25A4	NCBITaxon:9606	Homo sapiens			HP:0002548	Parkinsonism with favorable response to dopaminergic medication	ECO:0000322|ECO:0000501	imported manually asserted information used in automatic assertion|evidence used in automatic assertion		http://data.monarchinitiative.org/ttl/orphanet.ttl|http://data.monarchinitiative.org/ttl/hpoa.ttl	inferred
NCBIGene:56652	PEO1	NCBITaxon:9606	Homo sapiens			HP:0002548	Parkinsonism with favorable response to dopaminergic medication	ECO:0000322|ECO:0000501	imported manually asserted information used in automatic assertion|evidence used in automatic assertion		http://data.monarchinitiative.org/ttl/orphanet.ttl|http://data.monarchinitiative.org/ttl/hpoa.ttl	inferred
NCBIGene:23400	ATP13A2	NCBITaxon:9606	Homo sapiens			HP:0002548	Parkinsonism with favorable response to dopaminergic medication	ECO:0000304|ECO:0000322|ECO:0000220|ECO:0000220	traceable author statement used in manual assertion|imported manually asserted information used in automatic assertion|sequencing assay evidence|sequencing assay evidence	PMID:17485642|PMID:495089|PMID:20853184|PMID:16964263|PMID:21724849|PMID:26633545|PMID:22388936|PMID:26633545|PMID:21094623|PMID:21724849|PMID:16964263|PMID:21724849|PMID:20310007|PMID:16964263	http://data.monarchinitiative.org/ttl/orphanet.ttl|http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/hpoa.ttl	inferred
NCBIGene:2643	GCH1	NCBITaxon:9606	Homo sapiens			HP:0002548	Parkinsonism with favorable response to dopaminergic medication	ECO:0000304|ECO:0000322|ECO:0000220	traceable author statement used in manual assertion|imported manually asserted information used in automatic assertion|sequencing assay evidence	PMID:10732814|PMID:7730309|PMID:7730309|PMID:9576537|PMID:10208576|PMID:9576537|PMID:7730309|PMID:9667588|PMID:7730309|PMID:11359069|PMID:11026444|PMID:11486899|PMID:17111153|PMID:12391354|PMID:10732814|PMID:9576537|PMID:10078749	http://data.monarchinitiative.org/ttl/orphanet.ttl|http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/hpoa.ttl	inferred
NCBIGene:5428	POLG	NCBITaxon:9606	Homo sapiens			HP:0002548	Parkinsonism with favorable response to dopaminergic medication	ECO:0000501|ECO:0000322|ECO:0000220	evidence used in automatic assertion|imported manually asserted information used in automatic assertion|sequencing assay evidence	PMID:12210792|PMID:15351195|PMID:11431686|PMID:12210792|PMID:2725645|PMID:2067633|PMID:14467368|PMID:17420318|PMID:11897778	http://data.monarchinitiative.org/ttl/orphanet.ttl|http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/hpoa.ttl	inferred
NCBIGene:25793	FBXO7	NCBITaxon:9606	Homo sapiens			HP:0002548	Parkinsonism with favorable response to dopaminergic medication	ECO:0000501|ECO:0000220|ECO:0000322	evidence used in automatic assertion|sequencing assay evidence|imported manually asserted information used in automatic assertion	PMID:18513678|PMID:19038853|PMID:19038853|PMID:19038853	http://data.monarchinitiative.org/ttl/orphanet.ttl|http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/hpoa.ttl	inferred
NCBIGene:11232	POLG2	NCBITaxon:9606	Homo sapiens			HP:0002548	Parkinsonism with favorable response to dopaminergic medication	ECO:0000322|ECO:0000501	imported manually asserted information used in automatic assertion|evidence used in automatic assertion		http://data.monarchinitiative.org/ttl/orphanet.ttl|http://data.monarchinitiative.org/ttl/hpoa.ttl	inferred
NCBIGene:50484	RRM2B	NCBITaxon:9606	Homo sapiens			HP:0002548	Parkinsonism with favorable response to dopaminergic medication	ECO:0000322|ECO:0000501	imported manually asserted information used in automatic assertion|evidence used in automatic assertion		http://data.monarchinitiative.org/ttl/orphanet.ttl|http://data.monarchinitiative.org/ttl/hpoa.ttl	inferred
NCBIGene:6622	SNCA	NCBITaxon:9606	Homo sapiens			HP:0002548	Parkinsonism with favorable response to dopaminergic medication	ECO:0000322|ECO:0000501	imported manually asserted information used in automatic assertion|evidence used in automatic assertion		http://data.monarchinitiative.org/ttl/orphanet.ttl|http://data.monarchinitiative.org/ttl/hpoa.ttl	inferred
NCBIGene:6872	TAF1	NCBITaxon:9606	Homo sapiens			HP:0002548	Parkinsonism with favorable response to dopaminergic medication	ECO:0000322|ECO:0000220|ECO:0000304	imported manually asserted information used in automatic assertion|sequencing assay evidence|traceable author statement used in manual assertion	PMID:17273961	http://data.monarchinitiative.org/ttl/orphanet.ttl|http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/hpoa.ttl	inferred