Mercurial > repos > niels > annovar_yaml_wrapper
comparison annovar_yaml/annovar_yaml.xml @ 13:aeb0873c9218 draft
Uploaded
| author | niels |
|---|---|
| date | Tue, 14 May 2019 07:19:12 -0400 |
| parents | 76c907b6eb0e |
| children | 94ddfdeb1d38 |
comparison
equal
deleted
inserted
replaced
| 12:76c907b6eb0e | 13:aeb0873c9218 |
|---|---|
| 6 <requirement type="package" version="0.74">perl-yaml-xs</requirement> | 6 <requirement type="package" version="0.74">perl-yaml-xs</requirement> |
| 7 <requirement type="package" version="2.173">perl-data-dumper</requirement> | 7 <requirement type="package" version="2.173">perl-data-dumper</requirement> |
| 8 <requirement type="package" version="2.50">perl-getopt-long</requirement> | 8 <requirement type="package" version="2.50">perl-getopt-long</requirement> |
| 9 </requirements> | 9 </requirements> |
| 10 <command detect_errors="exit_code"><![CDATA[ | 10 <command detect_errors="exit_code"><![CDATA[ |
| 11 perl $__tool_directory__/annovar_yaml.pl --invcf $vcf --inyml $yaml --outvcf $output | 11 perl --version && perl $__tool_directory__/annovar_yaml.pl --invcf $vcf --inyml $yaml --outvcf $output |
| 12 ]]></command> | 12 ]]></command> |
| 13 | 13 |
| 14 <inputs> | 14 <inputs> |
| 15 | 15 |
| 16 <param type="data" name="yaml" format="txt" /> | 16 <param type="data" name="yaml" format="txt" /> |