annotate src/print_record.h @ 4:c70137414dcd draft

sickle v1.33
author nikhil-joshi
date Wed, 23 Jul 2014 18:35:10 -0400
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1 #ifndef PRINT_RECORD_H
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2 #define PRINT_RECORD_H
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4 #include <stdio.h>
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5 #include <zlib.h>
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6 #include "kseq.h"
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8 void print_record (FILE *fp, kseq_t *fqr, cutsites *cs);
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9 void print_record_gzip (gzFile fp, kseq_t *fqr, cutsites *cs);
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10 void print_record_N (FILE *fp, kseq_t *fqr, int qualtype);
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11 void print_record_N_gzip (gzFile fp, kseq_t *fqr, int qualtype);
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13 #endif /* PRINT_RECORD_H */