Mercurial > repos > nml > assemblystats
comparison README_ASSEMBLY_STATS @ 0:ad2b274663f8 draft
planemo upload for repository https://github.com/phac-nml/galaxy_tools commit 3f9ae719338c7c8db81d645b8ee09727e2d9ce23
| author | nml |
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| date | Tue, 07 Nov 2017 12:28:31 -0500 |
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| -1:000000000000 | 0:ad2b274663f8 |
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| 1 #Created 07/01/2011 | |
| 2 #Konrad Paszkiewicz, University of Exeter | |
| 3 | |
| 4 #Modified by Mariam Iskander and Matthew Gopez, October 13th, 2017 | |
| 5 | |
| 6 Assembly stats | |
| 7 | |
| 8 This series of scripts calculates various metrics on an input FASTA file. Typically this is most useful on either denovo genomic or transcriptomic data. | |
| 9 | |
| 10 Prerequisites: | |
| 11 | |
| 12 1. The bundled perl script fasta_summary.pl | |
| 13 | |
| 14 Limitations: | |
| 15 | |
| 16 Ideally this should output a composite dataset of some sort |