view README_ASSEMBLY_STATS @ 0:ad2b274663f8 draft

planemo upload for repository https://github.com/phac-nml/galaxy_tools commit 3f9ae719338c7c8db81d645b8ee09727e2d9ce23
author nml
date Tue, 07 Nov 2017 12:28:31 -0500
parents
children
line wrap: on
line source

#Created 07/01/2011
#Konrad Paszkiewicz, University of Exeter

#Modified by Mariam Iskander and Matthew Gopez, October 13th, 2017

Assembly stats

This series of scripts calculates various metrics on an input FASTA file. Typically this is most useful on either denovo genomic or transcriptomic data.

Prerequisites:

1. The bundled perl script fasta_summary.pl 

Limitations:

Ideally this should output a composite dataset of some sort