Mercurial > repos > nml > staramr

annotate test-data/test1-detailed-summary-ecoli.tsv @ 17:141afacabcfa draft

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planemo upload for repository https://github.com/phac-nml/galaxy_tools/tree/master/tools/staramr commit e752f6e09372d3513de79d85baa619c5f5065303
author nml
date Thu, 31 Aug 2023 15:55:49 +0000
parents be818ae858e4
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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17
141afacabcfa planemo upload for repository https://github.com/phac-nml/galaxy_tools/tree/master/tools/staramr commit e752f6e09372d3513de79d85baa619c5f5065303
nml
parents: 15
diff changeset
1 Isolate ID Data Data Type Predicted Phenotype CGE Predicted Phenotype %Identity %Overlap HSP Length/Total Length Contig Start End Accession
141afacabcfa planemo upload for repository https://github.com/phac-nml/galaxy_tools/tree/master/tools/staramr commit e752f6e09372d3513de79d85baa619c5f5065303
nml
parents: 15
diff changeset
2 16S-rc_gyrA-rc_beta-lactam.fsa ST- (-) MLST
141afacabcfa planemo upload for repository https://github.com/phac-nml/galaxy_tools/tree/master/tools/staramr commit e752f6e09372d3513de79d85baa619c5f5065303
nml
parents: 15
diff changeset
3 16S-rc_gyrA-rc_beta-lactam.fsa None Plasmid
141afacabcfa planemo upload for repository https://github.com/phac-nml/galaxy_tools/tree/master/tools/staramr commit e752f6e09372d3513de79d85baa619c5f5065303
nml
parents: 15
diff changeset
4 16S-rc_gyrA-rc_beta-lactam.fsa blaIMP-42 Resistance ampicillin, amoxicillin/clavulanic acid, cefoxitin, ceftriaxone, meropenem Amoxicillin, Amoxicillin+Clavulanic acid, Ampicillin, Ampicillin+Clavulanic acid, Cefepime, Cefixime, Cefotaxime, Cefoxitin, Ceftazidime, Ertapenem, Imipenem, Meropenem, Piperacillin, Piperacillin+Tazobactam 99.73 100.0 741/741 16S_rrsD 4381 5121 AB753456