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view test-data/test1-detailed-summary.tsv @ 7:f1adc47e017a draft

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planemo upload for repository https://github.com/phac-nml/staramr commit dad82f0ddadb5e106a54d5aa6609918325e49d23
author nml
date Thu, 16 May 2019 15:29:53 -0400
parents 3c09557ac425
children 61a3e97aa865
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Isolate ID	Gene/Plasmid	Predicted Phenotype	%Identity	%Overlap	HSP Length/Total Length	Contig	Start	End	Accession	Data Type
16S-rc_gyrA-rc_beta-lactam.fsa	None									Plasmid
16S-rc_gyrA-rc_beta-lactam.fsa	16S_rrsD (C1065T)	spectinomycin	99.94	100.0	1544/1544	16S_rrsD	1604	61		Resistance
16S-rc_gyrA-rc_beta-lactam.fsa	blaIMP-42	ampicillin, amoxicillin/clavulanic acid, cefoxitin, ceftriaxone, meropenem	99.73	100.0	741/741	16S_rrsD	4381	5121	AB753456	Resistance
16S-rc_gyrA-rc_beta-lactam.fsa	gyrA (A67P)	ciprofloxacin I/R, nalidixic acid	99.96	100.0	2637/2637	16S_rrsD	4317	1681		Resistance