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0
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1 HMMER3/b [3.0 | March 2010]
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2 NAME 3_End_Amoebozoa_58S_end_four_long
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3 LENG 45
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4 ALPH DNA
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5 RF no
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6 CS no
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7 MAP yes
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8 DATE Fri Jan 20 23:03:49 2012
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9 NSEQ 5
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10 EFFN 3.198242
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11 CKSUM 1352929219
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12 STATS LOCAL MSV -8.1195 0.71934
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13 STATS LOCAL VITERBI -7.8448 0.71934
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14 STATS LOCAL FORWARD -3.8579 0.71934
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15 HMM A C G T
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16 m->m m->i m->d i->m i->i d->m d->d
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17 COMPO 2.36165 1.09112 1.20867 1.30453
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18 1.38629 1.38629 1.38629 1.38629
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19 0.03775 3.98866 3.98866 1.46634 0.26236 0.00000 *
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20 1 0.14739 3.33958 2.77542 3.23743 1 - -
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21 1.38629 1.38629 1.38629 1.38629
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22 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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23 2 3.38618 0.13595 3.43760 2.79470 2 - -
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24 1.38629 1.38629 1.38629 1.38629
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25 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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26 3 2.91894 3.54631 0.12180 3.44673 3 - -
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27 1.38629 1.38629 1.38629 1.38629
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28 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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29 4 3.04773 2.56910 3.09744 0.18541 4 - -
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30 1.38629 1.38629 1.38629 1.38629
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31 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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32 5 2.91894 3.54631 0.12180 3.44673 5 - -
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33 1.38629 1.38629 1.38629 1.38629
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34 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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35 6 3.38618 0.13595 3.43760 2.79470 6 - -
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36 1.38629 1.38629 1.38629 1.38629
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37 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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38 7 2.91894 3.54631 0.12180 3.44673 7 - -
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39 1.38629 1.38629 1.38629 1.38629
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40 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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41 8 2.91894 3.54631 0.12180 3.44673 8 - -
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42 1.38629 1.38629 1.38629 1.38629
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43 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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44 9 3.38618 0.13595 3.43760 2.79470 9 - -
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45 1.38629 1.38629 1.38629 1.38629
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46 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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47 10 3.38618 0.13595 3.43760 2.79470 10 - -
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48 1.38629 1.38629 1.38629 1.38629
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49 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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50 11 3.04773 2.56910 3.09744 0.18541 11 - -
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51 1.38629 1.38629 1.38629 1.38629
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52 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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53 12 3.38618 0.13595 3.43760 2.79470 12 - -
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54 1.38629 1.38629 1.38629 1.38629
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55 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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56 13 2.91894 3.54631 0.12180 3.44673 13 - -
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57 1.38629 1.38629 1.38629 1.38629
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58 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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59 14 3.04773 2.56910 3.09744 0.18541 14 - -
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60 1.38629 1.38629 1.38629 1.38629
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61 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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62 15 3.38618 0.13595 3.43760 2.79470 15 - -
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63 1.38629 1.38629 1.38629 1.38629
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64 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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65 16 3.04773 2.56910 3.09744 0.18541 16 - -
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66 1.38629 1.38629 1.38629 1.38629
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67 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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68 17 3.04773 2.56910 3.09744 0.18541 17 - -
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69 1.38629 1.38629 1.38629 1.38629
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70 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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71 18 3.38618 0.13595 3.43760 2.79470 18 - -
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72 1.38629 1.38629 1.38629 1.38629
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73 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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74 19 2.91894 3.54631 0.12180 3.44673 19 - -
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75 1.38629 1.38629 1.38629 1.38629
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76 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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77 20 2.91894 3.54631 0.12180 3.44673 20 - -
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78 1.38629 1.38629 1.38629 1.38629
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79 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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80 21 0.14739 3.33958 2.77542 3.23743 21 - -
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81 1.38629 1.38629 1.38629 1.38629
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82 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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83 22 3.38618 0.13595 3.43760 2.79470 22 - -
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84 1.38629 1.38629 1.38629 1.38629
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85 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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86 23 2.91894 3.54631 0.12180 3.44673 23 - -
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87 1.38629 1.38629 1.38629 1.38629
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88 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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89 24 3.38618 0.13595 3.43760 2.79470 24 - -
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90 1.38629 1.38629 1.38629 1.38629
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91 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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92 25 3.04773 2.56910 3.09744 0.18541 25 - -
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93 1.38629 1.38629 1.38629 1.38629
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94 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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95 26 2.91894 3.54631 0.12180 3.44673 26 - -
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96 1.38629 1.38629 1.38629 1.38629
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97 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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98 27 2.91894 3.54631 0.12180 3.44673 27 - -
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99 1.38629 1.38629 1.38629 1.38629
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100 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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101 28 3.38618 0.13595 3.43760 2.79470 28 - -
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102 1.38629 1.38629 1.38629 1.38629
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103 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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104 29 3.38618 0.13595 3.43760 2.79470 29 - -
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105 1.38629 1.38629 1.38629 1.38629
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106 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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107 30 3.38618 0.13595 3.43760 2.79470 30 - -
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108 1.38629 1.38629 1.38629 1.38629
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109 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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110 31 3.04773 2.56910 3.09744 0.18541 31 - -
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111 1.38629 1.38629 1.38629 1.38629
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112 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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113 32 3.38618 0.13595 3.43760 2.79470 32 - -
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114 1.38629 1.38629 1.38629 1.38629
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115 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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116 33 3.04773 2.56910 3.09744 0.18541 33 - -
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117 1.38629 1.38629 1.38629 1.38629
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118 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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119 34 3.04773 2.56910 3.09744 0.18541 34 - -
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120 1.38629 1.38629 1.38629 1.38629
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121 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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122 35 2.91894 3.54631 0.12180 3.44673 35 - -
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123 1.38629 1.38629 1.38629 1.38629
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124 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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125 36 2.91894 3.54631 0.12180 3.44673 36 - -
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126 1.38629 1.38629 1.38629 1.38629
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127 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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128 37 3.38618 0.13595 3.43760 2.79470 37 - -
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129 1.38629 1.38629 1.38629 1.38629
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130 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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131 38 3.04773 2.56910 3.09744 0.18541 38 - -
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132 1.38629 1.38629 1.38629 1.38629
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133 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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134 39 3.04773 2.56910 3.09744 0.18541 39 - -
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135 1.38629 1.38629 1.38629 1.38629
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136 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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137 40 2.91894 3.54631 0.12180 3.44673 40 - -
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138 1.38629 1.38629 1.38629 1.38629
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139 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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140 41 3.38618 0.13595 3.43760 2.79470 41 - -
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141 1.38629 1.38629 1.38629 1.38629
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142 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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143 42 3.38618 0.13595 3.43760 2.79470 42 - -
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144 1.38629 1.38629 1.38629 1.38629
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145 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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146 43 3.04773 2.56910 3.09744 0.18541 43 - -
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147 1.38629 1.38629 1.38629 1.38629
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148 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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149 44 3.04773 2.56910 3.09744 0.18541 44 - -
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150 1.38629 1.38629 1.38629 1.38629
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151 0.03775 3.98866 3.98866 1.46634 0.26236 1.09861 0.40547
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152 45 2.91894 3.54631 0.12180 3.44673 45 - -
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153 1.38629 1.38629 1.38629 1.38629
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154 0.01905 3.96996 * 1.46634 0.26236 0.00000 *
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155 //
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156 HMMER3/b [3.0 | March 2010]
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157 NAME 3_End_Amoebozoa_58S_end_one_long
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158 LENG 45
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159 ALPH DNA
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160 RF no
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161 CS no
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162 MAP yes
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163 DATE Fri Jan 20 23:03:22 2012
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164 NSEQ 2
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165 EFFN 2.000000
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166 CKSUM 2956303962
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167 STATS LOCAL MSV -7.6683 0.72805
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168 STATS LOCAL VITERBI -8.2257 0.72805
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169 STATS LOCAL FORWARD -3.2732 0.72805
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170 HMM A C G T
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171 m->m m->i m->d i->m i->i d->m d->d
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172 COMPO 1.92481 1.13424 1.33224 1.31474
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173 1.38629 1.38629 1.38629 1.38629
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174 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
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175 1 2.81865 0.23582 2.88868 2.35662 1 - -
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176 1.38629 1.38629 1.38629 1.38629
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177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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178 2 0.23862 2.84929 2.43386 2.70756 2 - -
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179 1.38629 1.38629 1.38629 1.38629
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180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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181 3 0.23862 2.84929 2.43386 2.70756 3 - -
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182 1.38629 1.38629 1.38629 1.38629
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183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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184 4 2.57915 2.25909 2.64442 0.28946 4 - -
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185 1.38629 1.38629 1.38629 1.38629
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186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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187 5 2.53331 3.02441 0.20344 2.88069 5 - -
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188 1.38629 1.38629 1.38629 1.38629
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189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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190 6 2.81865 0.23582 2.88868 2.35662 6 - -
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191 1.38629 1.38629 1.38629 1.38629
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192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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193 7 2.53331 3.02441 0.20344 2.88069 7 - -
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194 1.38629 1.38629 1.38629 1.38629
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195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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196 8 2.53331 3.02441 0.20344 2.88069 8 - -
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197 1.38629 1.38629 1.38629 1.38629
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198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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199 9 2.81865 0.23582 2.88868 2.35662 9 - -
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200 1.38629 1.38629 1.38629 1.38629
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201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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202 10 2.81865 0.23582 2.88868 2.35662 10 - -
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203 1.38629 1.38629 1.38629 1.38629
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204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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205 11 2.57915 2.25909 2.64442 0.28946 11 - -
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206 1.38629 1.38629 1.38629 1.38629
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207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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208 12 2.57915 2.25909 2.64442 0.28946 12 - -
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209 1.38629 1.38629 1.38629 1.38629
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210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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211 13 2.53331 3.02441 0.20344 2.88069 13 - -
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212 1.38629 1.38629 1.38629 1.38629
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213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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214 14 2.57915 2.25909 2.64442 0.28946 14 - -
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215 1.38629 1.38629 1.38629 1.38629
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216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
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217 15 2.81865 0.23582 2.88868 2.35662 15 - -
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218 1.38629 1.38629 1.38629 1.38629
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219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
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220 16 2.81865 0.23582 2.88868 2.35662 16 - -
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221 1.38629 1.38629 1.38629 1.38629
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222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
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223 17 2.57915 2.25909 2.64442 0.28946 17 - -
|
|
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224 1.38629 1.38629 1.38629 1.38629
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|
|
225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
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226 18 2.81865 0.23582 2.88868 2.35662 18 - -
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|
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227 1.38629 1.38629 1.38629 1.38629
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|
|
228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
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229 19 2.53331 3.02441 0.20344 2.88069 19 - -
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|
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230 1.38629 1.38629 1.38629 1.38629
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|
231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
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232 20 2.53331 3.02441 0.20344 2.88069 20 - -
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233 1.38629 1.38629 1.38629 1.38629
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234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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235 21 0.23862 2.84929 2.43386 2.70756 21 - -
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|
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236 1.38629 1.38629 1.38629 1.38629
|
|
|
237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
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|
238 22 2.81865 0.23582 2.88868 2.35662 22 - -
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|
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239 1.38629 1.38629 1.38629 1.38629
|
|
|
240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
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241 23 0.23862 2.84929 2.43386 2.70756 23 - -
|
|
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242 1.38629 1.38629 1.38629 1.38629
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|
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243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
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244 24 2.81865 0.23582 2.88868 2.35662 24 - -
|
|
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245 1.38629 1.38629 1.38629 1.38629
|
|
|
246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
247 25 2.57915 2.25909 2.64442 0.28946 25 - -
|
|
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248 1.38629 1.38629 1.38629 1.38629
|
|
|
249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
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250 26 2.53331 3.02441 0.20344 2.88069 26 - -
|
|
|
251 1.38629 1.38629 1.38629 1.38629
|
|
|
252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
253 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
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254 1.38629 1.38629 1.38629 1.38629
|
|
|
255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
256 28 2.81865 0.23582 2.88868 2.35662 28 - -
|
|
|
257 1.38629 1.38629 1.38629 1.38629
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|
|
258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
259 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
|
260 1.38629 1.38629 1.38629 1.38629
|
|
|
261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
262 30 2.81865 0.23582 2.88868 2.35662 30 - -
|
|
|
263 1.38629 1.38629 1.38629 1.38629
|
|
|
264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
265 31 2.81865 0.23582 2.88868 2.35662 31 - -
|
|
|
266 1.38629 1.38629 1.38629 1.38629
|
|
|
267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
268 32 2.81865 0.23582 2.88868 2.35662 32 - -
|
|
|
269 1.38629 1.38629 1.38629 1.38629
|
|
|
270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
271 33 2.57915 2.25909 2.64442 0.28946 33 - -
|
|
|
272 1.38629 1.38629 1.38629 1.38629
|
|
|
273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
274 34 2.57915 2.25909 2.64442 0.28946 34 - -
|
|
|
275 1.38629 1.38629 1.38629 1.38629
|
|
|
276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
277 35 2.53331 3.02441 0.20344 2.88069 35 - -
|
|
|
278 1.38629 1.38629 1.38629 1.38629
|
|
|
279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
280 36 2.53331 3.02441 0.20344 2.88069 36 - -
|
|
|
281 1.38629 1.38629 1.38629 1.38629
|
|
|
282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
283 37 2.57915 2.25909 2.64442 0.28946 37 - -
|
|
|
284 1.38629 1.38629 1.38629 1.38629
|
|
|
285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
286 38 2.57915 2.25909 2.64442 0.28946 38 - -
|
|
|
287 1.38629 1.38629 1.38629 1.38629
|
|
|
288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
289 39 2.57915 2.25909 2.64442 0.28946 39 - -
|
|
|
290 1.38629 1.38629 1.38629 1.38629
|
|
|
291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
292 40 2.53331 3.02441 0.20344 2.88069 40 - -
|
|
|
293 1.38629 1.38629 1.38629 1.38629
|
|
|
294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
295 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
|
296 1.38629 1.38629 1.38629 1.38629
|
|
|
297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
298 42 2.81865 0.23582 2.88868 2.35662 42 - -
|
|
|
299 1.38629 1.38629 1.38629 1.38629
|
|
|
300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
301 43 2.57915 2.25909 2.64442 0.28946 43 - -
|
|
|
302 1.38629 1.38629 1.38629 1.38629
|
|
|
303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
304 44 2.57915 2.25909 2.64442 0.28946 44 - -
|
|
|
305 1.38629 1.38629 1.38629 1.38629
|
|
|
306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
307 45 2.53331 3.02441 0.20344 2.88069 45 - -
|
|
|
308 1.38629 1.38629 1.38629 1.38629
|
|
|
309 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
|
310 //
|
|
|
311 HMMER3/b [3.0 | March 2010]
|
|
|
312 NAME 3_End_Amoebozoa_58S_end_three_long
|
|
|
313 LENG 45
|
|
|
314 ALPH DNA
|
|
|
315 RF no
|
|
|
316 CS no
|
|
|
317 MAP yes
|
|
|
318 DATE Fri Jan 20 23:03:40 2012
|
|
|
319 NSEQ 3
|
|
|
320 EFFN 3.000000
|
|
|
321 CKSUM 3482197706
|
|
|
322 STATS LOCAL MSV -7.9368 0.72097
|
|
|
323 STATS LOCAL VITERBI -7.9470 0.72097
|
|
|
324 STATS LOCAL FORWARD -3.8220 0.72097
|
|
|
325 HMM A C G T
|
|
|
326 m->m m->i m->d i->m i->i d->m d->d
|
|
|
327 COMPO 2.16502 1.08740 1.26141 1.32838
|
|
|
328 1.38629 1.38629 1.38629 1.38629
|
|
|
329 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
|
|
|
330 1 3.30705 0.14631 3.36166 2.73626 1 - -
|
|
|
331 1.38629 1.38629 1.38629 1.38629
|
|
|
332 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
333 2 2.86982 3.47591 0.13017 3.36931 2 - -
|
|
|
334 1.38629 1.38629 1.38629 1.38629
|
|
|
335 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
336 3 0.15719 3.27118 2.73043 3.16274 3 - -
|
|
|
337 1.38629 1.38629 1.38629 1.38629
|
|
|
338 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
339 4 2.97980 2.52563 3.03204 0.19727 4 - -
|
|
|
340 1.38629 1.38629 1.38629 1.38629
|
|
|
341 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
342 5 2.86982 3.47591 0.13017 3.36931 5 - -
|
|
|
343 1.38629 1.38629 1.38629 1.38629
|
|
|
344 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
345 6 3.30705 0.14631 3.36166 2.73626 6 - -
|
|
|
346 1.38629 1.38629 1.38629 1.38629
|
|
|
347 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
348 7 2.86982 3.47591 0.13017 3.36931 7 - -
|
|
|
349 1.38629 1.38629 1.38629 1.38629
|
|
|
350 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
351 8 0.15719 3.27118 2.73043 3.16274 8 - -
|
|
|
352 1.38629 1.38629 1.38629 1.38629
|
|
|
353 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
354 9 3.30705 0.14631 3.36166 2.73626 9 - -
|
|
|
355 1.38629 1.38629 1.38629 1.38629
|
|
|
356 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
357 10 3.30705 0.14631 3.36166 2.73626 10 - -
|
|
|
358 1.38629 1.38629 1.38629 1.38629
|
|
|
359 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
360 11 2.97980 2.52563 3.03204 0.19727 11 - -
|
|
|
361 1.38629 1.38629 1.38629 1.38629
|
|
|
362 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
363 12 2.97980 2.52563 3.03204 0.19727 12 - -
|
|
|
364 1.38629 1.38629 1.38629 1.38629
|
|
|
365 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
366 13 2.86982 3.47591 0.13017 3.36931 13 - -
|
|
|
367 1.38629 1.38629 1.38629 1.38629
|
|
|
368 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
369 14 3.30705 0.14631 3.36166 2.73626 14 - -
|
|
|
370 1.38629 1.38629 1.38629 1.38629
|
|
|
371 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
372 15 3.30705 0.14631 3.36166 2.73626 15 - -
|
|
|
373 1.38629 1.38629 1.38629 1.38629
|
|
|
374 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
375 16 2.42796 0.63000 2.50086 1.21343 16 - -
|
|
|
376 1.38629 1.38629 1.38629 1.38629
|
|
|
377 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
378 17 2.97980 2.52563 3.03204 0.19727 17 - -
|
|
|
379 1.38629 1.38629 1.38629 1.38629
|
|
|
380 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
381 18 3.30705 0.14631 3.36166 2.73626 18 - -
|
|
|
382 1.38629 1.38629 1.38629 1.38629
|
|
|
383 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
384 19 2.86982 3.47591 0.13017 3.36931 19 - -
|
|
|
385 1.38629 1.38629 1.38629 1.38629
|
|
|
386 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
387 20 2.86982 3.47591 0.13017 3.36931 20 - -
|
|
|
388 1.38629 1.38629 1.38629 1.38629
|
|
|
389 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
390 21 2.86982 3.47591 0.13017 3.36931 21 - -
|
|
|
391 1.38629 1.38629 1.38629 1.38629
|
|
|
392 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
393 22 3.30705 0.14631 3.36166 2.73626 22 - -
|
|
|
394 1.38629 1.38629 1.38629 1.38629
|
|
|
395 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
396 23 0.15719 3.27118 2.73043 3.16274 23 - -
|
|
|
397 1.38629 1.38629 1.38629 1.38629
|
|
|
398 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
399 24 3.30705 0.14631 3.36166 2.73626 24 - -
|
|
|
400 1.38629 1.38629 1.38629 1.38629
|
|
|
401 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
402 25 2.97980 2.52563 3.03204 0.19727 25 - -
|
|
|
403 1.38629 1.38629 1.38629 1.38629
|
|
|
404 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
405 26 2.86982 3.47591 0.13017 3.36931 26 - -
|
|
|
406 1.38629 1.38629 1.38629 1.38629
|
|
|
407 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
408 27 2.86982 3.47591 0.13017 3.36931 27 - -
|
|
|
409 1.38629 1.38629 1.38629 1.38629
|
|
|
410 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
411 28 2.97980 2.52563 3.03204 0.19727 28 - -
|
|
|
412 1.38629 1.38629 1.38629 1.38629
|
|
|
413 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
414 29 3.30705 0.14631 3.36166 2.73626 29 - -
|
|
|
415 1.38629 1.38629 1.38629 1.38629
|
|
|
416 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
417 30 3.30705 0.14631 3.36166 2.73626 30 - -
|
|
|
418 1.38629 1.38629 1.38629 1.38629
|
|
|
419 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
420 31 3.30705 0.14631 3.36166 2.73626 31 - -
|
|
|
421 1.38629 1.38629 1.38629 1.38629
|
|
|
422 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
423 32 3.30705 0.14631 3.36166 2.73626 32 - -
|
|
|
424 1.38629 1.38629 1.38629 1.38629
|
|
|
425 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
426 33 2.97980 2.52563 3.03204 0.19727 33 - -
|
|
|
427 1.38629 1.38629 1.38629 1.38629
|
|
|
428 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
429 34 2.42796 0.63000 2.50086 1.21343 34 - -
|
|
|
430 1.38629 1.38629 1.38629 1.38629
|
|
|
431 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
432 35 2.86982 3.47591 0.13017 3.36931 35 - -
|
|
|
433 1.38629 1.38629 1.38629 1.38629
|
|
|
434 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
435 36 2.86982 3.47591 0.13017 3.36931 36 - -
|
|
|
436 1.38629 1.38629 1.38629 1.38629
|
|
|
437 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
438 37 2.97980 2.52563 3.03204 0.19727 37 - -
|
|
|
439 1.38629 1.38629 1.38629 1.38629
|
|
|
440 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
441 38 2.97980 2.52563 3.03204 0.19727 38 - -
|
|
|
442 1.38629 1.38629 1.38629 1.38629
|
|
|
443 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
444 39 2.97980 2.52563 3.03204 0.19727 39 - -
|
|
|
445 1.38629 1.38629 1.38629 1.38629
|
|
|
446 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
447 40 2.86982 3.47591 0.13017 3.36931 40 - -
|
|
|
448 1.38629 1.38629 1.38629 1.38629
|
|
|
449 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
450 41 3.30705 0.14631 3.36166 2.73626 41 - -
|
|
|
451 1.38629 1.38629 1.38629 1.38629
|
|
|
452 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
453 42 3.30705 0.14631 3.36166 2.73626 42 - -
|
|
|
454 1.38629 1.38629 1.38629 1.38629
|
|
|
455 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
456 43 2.97980 2.52563 3.03204 0.19727 43 - -
|
|
|
457 1.38629 1.38629 1.38629 1.38629
|
|
|
458 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
459 44 2.97980 2.52563 3.03204 0.19727 44 - -
|
|
|
460 1.38629 1.38629 1.38629 1.38629
|
|
|
461 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
462 45 2.86982 3.47591 0.13017 3.36931 45 - -
|
|
|
463 1.38629 1.38629 1.38629 1.38629
|
|
|
464 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
|
|
|
465 //
|
|
|
466 HMMER3/b [3.0 | March 2010]
|
|
|
467 NAME 3_End_Amoebozoa_58S_end_two_long
|
|
|
468 LENG 45
|
|
|
469 ALPH DNA
|
|
|
470 RF no
|
|
|
471 CS no
|
|
|
472 MAP yes
|
|
|
473 DATE Fri Jan 20 23:03:29 2012
|
|
|
474 NSEQ 3
|
|
|
475 EFFN 3.000000
|
|
|
476 CKSUM 3221230878
|
|
|
477 STATS LOCAL MSV -8.1908 0.72028
|
|
|
478 STATS LOCAL VITERBI -7.8625 0.72028
|
|
|
479 STATS LOCAL FORWARD -4.0676 0.72028
|
|
|
480 HMM A C G T
|
|
|
481 m->m m->i m->d i->m i->i d->m d->d
|
|
|
482 COMPO 2.17869 1.14382 1.26619 1.25069
|
|
|
483 1.38629 1.38629 1.38629 1.38629
|
|
|
484 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
|
|
|
485 1 3.30705 0.14631 3.36166 2.73626 1 - -
|
|
|
486 1.38629 1.38629 1.38629 1.38629
|
|
|
487 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
488 2 2.86982 3.47591 0.13017 3.36931 2 - -
|
|
|
489 1.38629 1.38629 1.38629 1.38629
|
|
|
490 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
491 3 0.15719 3.27118 2.73043 3.16274 3 - -
|
|
|
492 1.38629 1.38629 1.38629 1.38629
|
|
|
493 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
494 4 2.97980 2.52563 3.03204 0.19727 4 - -
|
|
|
495 1.38629 1.38629 1.38629 1.38629
|
|
|
496 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
497 5 2.86982 3.47591 0.13017 3.36931 5 - -
|
|
|
498 1.38629 1.38629 1.38629 1.38629
|
|
|
499 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
500 6 3.30705 0.14631 3.36166 2.73626 6 - -
|
|
|
501 1.38629 1.38629 1.38629 1.38629
|
|
|
502 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
503 7 2.86982 3.47591 0.13017 3.36931 7 - -
|
|
|
504 1.38629 1.38629 1.38629 1.38629
|
|
|
505 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
506 8 2.86982 3.47591 0.13017 3.36931 8 - -
|
|
|
507 1.38629 1.38629 1.38629 1.38629
|
|
|
508 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
509 9 3.30705 0.14631 3.36166 2.73626 9 - -
|
|
|
510 1.38629 1.38629 1.38629 1.38629
|
|
|
511 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
512 10 3.30705 0.14631 3.36166 2.73626 10 - -
|
|
|
513 1.38629 1.38629 1.38629 1.38629
|
|
|
514 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
515 11 2.97980 2.52563 3.03204 0.19727 11 - -
|
|
|
516 1.38629 1.38629 1.38629 1.38629
|
|
|
517 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
518 12 2.97980 2.52563 3.03204 0.19727 12 - -
|
|
|
519 1.38629 1.38629 1.38629 1.38629
|
|
|
520 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
521 13 2.86982 3.47591 0.13017 3.36931 13 - -
|
|
|
522 1.38629 1.38629 1.38629 1.38629
|
|
|
523 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
524 14 3.30705 0.14631 3.36166 2.73626 14 - -
|
|
|
525 1.38629 1.38629 1.38629 1.38629
|
|
|
526 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
527 15 2.97980 2.52563 3.03204 0.19727 15 - -
|
|
|
528 1.38629 1.38629 1.38629 1.38629
|
|
|
529 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
530 16 2.97980 2.52563 3.03204 0.19727 16 - -
|
|
|
531 1.38629 1.38629 1.38629 1.38629
|
|
|
532 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
533 17 2.97980 2.52563 3.03204 0.19727 17 - -
|
|
|
534 1.38629 1.38629 1.38629 1.38629
|
|
|
535 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
536 18 3.30705 0.14631 3.36166 2.73626 18 - -
|
|
|
537 1.38629 1.38629 1.38629 1.38629
|
|
|
538 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
539 19 2.86982 3.47591 0.13017 3.36931 19 - -
|
|
|
540 1.38629 1.38629 1.38629 1.38629
|
|
|
541 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
542 20 0.15719 3.27118 2.73043 3.16274 20 - -
|
|
|
543 1.38629 1.38629 1.38629 1.38629
|
|
|
544 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
545 21 2.86982 3.47591 0.13017 3.36931 21 - -
|
|
|
546 1.38629 1.38629 1.38629 1.38629
|
|
|
547 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
548 22 3.30705 0.14631 3.36166 2.73626 22 - -
|
|
|
549 1.38629 1.38629 1.38629 1.38629
|
|
|
550 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
551 23 0.15719 3.27118 2.73043 3.16274 23 - -
|
|
|
552 1.38629 1.38629 1.38629 1.38629
|
|
|
553 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
554 24 3.30705 0.14631 3.36166 2.73626 24 - -
|
|
|
555 1.38629 1.38629 1.38629 1.38629
|
|
|
556 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
557 25 2.97980 2.52563 3.03204 0.19727 25 - -
|
|
|
558 1.38629 1.38629 1.38629 1.38629
|
|
|
559 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
560 26 2.86982 3.47591 0.13017 3.36931 26 - -
|
|
|
561 1.38629 1.38629 1.38629 1.38629
|
|
|
562 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
563 27 2.86982 3.47591 0.13017 3.36931 27 - -
|
|
|
564 1.38629 1.38629 1.38629 1.38629
|
|
|
565 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
566 28 3.30705 0.14631 3.36166 2.73626 28 - -
|
|
|
567 1.38629 1.38629 1.38629 1.38629
|
|
|
568 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
569 29 3.30705 0.14631 3.36166 2.73626 29 - -
|
|
|
570 1.38629 1.38629 1.38629 1.38629
|
|
|
571 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
572 30 3.30705 0.14631 3.36166 2.73626 30 - -
|
|
|
573 1.38629 1.38629 1.38629 1.38629
|
|
|
574 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
575 31 3.30705 0.14631 3.36166 2.73626 31 - -
|
|
|
576 1.38629 1.38629 1.38629 1.38629
|
|
|
577 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
578 32 3.30705 0.14631 3.36166 2.73626 32 - -
|
|
|
579 1.38629 1.38629 1.38629 1.38629
|
|
|
580 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
581 33 2.97980 2.52563 3.03204 0.19727 33 - -
|
|
|
582 1.38629 1.38629 1.38629 1.38629
|
|
|
583 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
584 34 2.97980 2.52563 3.03204 0.19727 34 - -
|
|
|
585 1.38629 1.38629 1.38629 1.38629
|
|
|
586 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
587 35 2.86982 3.47591 0.13017 3.36931 35 - -
|
|
|
588 1.38629 1.38629 1.38629 1.38629
|
|
|
589 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
590 36 2.86982 3.47591 0.13017 3.36931 36 - -
|
|
|
591 1.38629 1.38629 1.38629 1.38629
|
|
|
592 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
593 37 2.97980 2.52563 3.03204 0.19727 37 - -
|
|
|
594 1.38629 1.38629 1.38629 1.38629
|
|
|
595 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
596 38 2.97980 2.52563 3.03204 0.19727 38 - -
|
|
|
597 1.38629 1.38629 1.38629 1.38629
|
|
|
598 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
599 39 2.97980 2.52563 3.03204 0.19727 39 - -
|
|
|
600 1.38629 1.38629 1.38629 1.38629
|
|
|
601 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
602 40 2.86982 3.47591 0.13017 3.36931 40 - -
|
|
|
603 1.38629 1.38629 1.38629 1.38629
|
|
|
604 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
605 41 3.30705 0.14631 3.36166 2.73626 41 - -
|
|
|
606 1.38629 1.38629 1.38629 1.38629
|
|
|
607 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
608 42 3.30705 0.14631 3.36166 2.73626 42 - -
|
|
|
609 1.38629 1.38629 1.38629 1.38629
|
|
|
610 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
611 43 2.97980 2.52563 3.03204 0.19727 43 - -
|
|
|
612 1.38629 1.38629 1.38629 1.38629
|
|
|
613 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
614 44 2.97980 2.52563 3.03204 0.19727 44 - -
|
|
|
615 1.38629 1.38629 1.38629 1.38629
|
|
|
616 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
617 45 2.86982 3.47591 0.13017 3.36931 45 - -
|
|
|
618 1.38629 1.38629 1.38629 1.38629
|
|
|
619 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
|
|
|
620 //
|
|
|
621 HMMER3/b [3.0 | March 2010]
|
|
|
622 NAME 2_5.8_Amoebozoa_58S_start_five_long
|
|
|
623 LENG 45
|
|
|
624 ALPH DNA
|
|
|
625 RF no
|
|
|
626 CS no
|
|
|
627 MAP yes
|
|
|
628 DATE Fri Jan 20 22:47:41 2012
|
|
|
629 NSEQ 5
|
|
|
630 EFFN 3.266602
|
|
|
631 CKSUM 3193284995
|
|
|
632 STATS LOCAL MSV -8.0914 0.71931
|
|
|
633 STATS LOCAL VITERBI -7.6850 0.71931
|
|
|
634 STATS LOCAL FORWARD -4.3591 0.71931
|
|
|
635 HMM A C G T
|
|
|
636 m->m m->i m->d i->m i->i d->m d->d
|
|
|
637 COMPO 1.55227 1.31654 1.38656 1.30845
|
|
|
638 1.38629 1.38629 1.38629 1.38629
|
|
|
639 0.03727 4.00124 4.00124 1.46634 0.26236 0.00000 *
|
|
|
640 1 3.41221 0.13273 3.46255 2.81376 1 - -
|
|
|
641 1.38629 1.38629 1.38629 1.38629
|
|
|
642 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
643 2 0.14431 3.36214 2.79014 3.26209 2 - -
|
|
|
644 1.38629 1.38629 1.38629 1.38629
|
|
|
645 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
646 3 0.14431 3.36214 2.79014 3.26209 3 - -
|
|
|
647 1.38629 1.38629 1.38629 1.38629
|
|
|
648 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
649 4 3.41221 0.13273 3.46255 2.81376 4 - -
|
|
|
650 1.38629 1.38629 1.38629 1.38629
|
|
|
651 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
652 5 3.07035 2.58352 3.11920 0.18165 5 - -
|
|
|
653 1.38629 1.38629 1.38629 1.38629
|
|
|
654 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
655 6 3.07035 2.58352 3.11920 0.18165 6 - -
|
|
|
656 1.38629 1.38629 1.38629 1.38629
|
|
|
657 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
658 7 3.07035 2.58352 3.11920 0.18165 7 - -
|
|
|
659 1.38629 1.38629 1.38629 1.38629
|
|
|
660 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
661 8 0.14431 3.36214 2.79014 3.26209 8 - -
|
|
|
662 1.38629 1.38629 1.38629 1.38629
|
|
|
663 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
664 9 3.41221 0.13273 3.46255 2.81376 9 - -
|
|
|
665 1.38629 1.38629 1.38629 1.38629
|
|
|
666 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
667 10 3.41221 0.13273 3.46255 2.81376 10 - -
|
|
|
668 1.38629 1.38629 1.38629 1.38629
|
|
|
669 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
670 11 0.14431 3.36214 2.79014 3.26209 11 - -
|
|
|
671 1.38629 1.38629 1.38629 1.38629
|
|
|
672 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
673 12 3.41221 0.13273 3.46255 2.81376 12 - -
|
|
|
674 1.38629 1.38629 1.38629 1.38629
|
|
|
675 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
676 13 3.41221 0.13273 3.46255 2.81376 13 - -
|
|
|
677 1.38629 1.38629 1.38629 1.38629
|
|
|
678 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
679 14 2.93484 3.56933 0.11920 3.47210 14 - -
|
|
|
680 1.38629 1.38629 1.38629 1.38629
|
|
|
681 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
682 15 3.07035 2.58352 3.11920 0.18165 15 - -
|
|
|
683 1.38629 1.38629 1.38629 1.38629
|
|
|
684 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
685 16 3.07035 2.58352 3.11920 0.18165 16 - -
|
|
|
686 1.38629 1.38629 1.38629 1.38629
|
|
|
687 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
688 17 0.14431 3.36214 2.79014 3.26209 17 - -
|
|
|
689 1.38629 1.38629 1.38629 1.38629
|
|
|
690 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
691 18 2.93484 3.56933 0.11920 3.47210 18 - -
|
|
|
692 1.38629 1.38629 1.38629 1.38629
|
|
|
693 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
694 19 2.93484 3.56933 0.11920 3.47210 19 - -
|
|
|
695 1.38629 1.38629 1.38629 1.38629
|
|
|
696 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
697 20 3.41221 0.13273 3.46255 2.81376 20 - -
|
|
|
698 1.38629 1.38629 1.38629 1.38629
|
|
|
699 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
700 21 2.93484 3.56933 0.11920 3.47210 21 - -
|
|
|
701 1.38629 1.38629 1.38629 1.38629
|
|
|
702 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
703 22 0.14431 3.36214 2.79014 3.26209 22 - -
|
|
|
704 1.38629 1.38629 1.38629 1.38629
|
|
|
705 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
706 23 3.07035 2.58352 3.11920 0.18165 23 - -
|
|
|
707 1.38629 1.38629 1.38629 1.38629
|
|
|
708 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
709 24 2.93484 3.56933 0.11920 3.47210 24 - -
|
|
|
710 1.38629 1.38629 1.38629 1.38629
|
|
|
711 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
712 25 2.93484 3.56933 0.11920 3.47210 25 - -
|
|
|
713 1.38629 1.38629 1.38629 1.38629
|
|
|
714 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
715 26 0.14431 3.36214 2.79014 3.26209 26 - -
|
|
|
716 1.38629 1.38629 1.38629 1.38629
|
|
|
717 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
718 27 3.07035 2.58352 3.11920 0.18165 27 - -
|
|
|
719 1.38629 1.38629 1.38629 1.38629
|
|
|
720 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
721 28 3.07035 2.58352 3.11920 0.18165 28 - -
|
|
|
722 1.38629 1.38629 1.38629 1.38629
|
|
|
723 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
724 29 2.93484 3.56933 0.11920 3.47210 29 - -
|
|
|
725 1.38629 1.38629 1.38629 1.38629
|
|
|
726 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
727 30 3.07035 2.58352 3.11920 0.18165 30 - -
|
|
|
728 1.38629 1.38629 1.38629 1.38629
|
|
|
729 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
730 31 3.07035 2.58352 3.11920 0.18165 31 - -
|
|
|
731 1.38629 1.38629 1.38629 1.38629
|
|
|
732 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
733 32 0.14431 3.36214 2.79014 3.26209 32 - -
|
|
|
734 1.38629 1.38629 1.38629 1.38629
|
|
|
735 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
736 33 2.93484 3.56933 0.11920 3.47210 33 - -
|
|
|
737 1.38629 1.38629 1.38629 1.38629
|
|
|
738 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
739 34 2.93484 3.56933 0.11920 3.47210 34 - -
|
|
|
740 1.38629 1.38629 1.38629 1.38629
|
|
|
741 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
742 35 3.07035 2.58352 3.11920 0.18165 35 - -
|
|
|
743 1.38629 1.38629 1.38629 1.38629
|
|
|
744 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
745 36 0.14431 3.36214 2.79014 3.26209 36 - -
|
|
|
746 1.38629 1.38629 1.38629 1.38629
|
|
|
747 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
748 37 3.41221 0.13273 3.46255 2.81376 37 - -
|
|
|
749 1.38629 1.38629 1.38629 1.38629
|
|
|
750 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
751 38 3.41221 0.13273 3.46255 2.81376 38 - -
|
|
|
752 1.38629 1.38629 1.38629 1.38629
|
|
|
753 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
754 39 3.41221 0.13273 3.46255 2.81376 39 - -
|
|
|
755 1.38629 1.38629 1.38629 1.38629
|
|
|
756 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
757 40 2.93484 3.56933 0.11920 3.47210 40 - -
|
|
|
758 1.38629 1.38629 1.38629 1.38629
|
|
|
759 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
760 41 3.41221 0.13273 3.46255 2.81376 41 - -
|
|
|
761 1.38629 1.38629 1.38629 1.38629
|
|
|
762 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
763 42 3.07035 2.58352 3.11920 0.18165 42 - -
|
|
|
764 1.38629 1.38629 1.38629 1.38629
|
|
|
765 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
766 43 3.07035 2.58352 3.11920 0.18165 43 - -
|
|
|
767 1.38629 1.38629 1.38629 1.38629
|
|
|
768 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
769 44 3.41221 0.13273 3.46255 2.81376 44 - -
|
|
|
770 1.38629 1.38629 1.38629 1.38629
|
|
|
771 0.03727 4.00124 4.00124 1.46634 0.26236 1.09861 0.40547
|
|
|
772 45 2.93484 3.56933 0.11920 3.47210 45 - -
|
|
|
773 1.38629 1.38629 1.38629 1.38629
|
|
|
774 0.01881 3.98278 * 1.46634 0.26236 0.00000 *
|
|
|
775 //
|
|
|
776 HMMER3/b [3.0 | March 2010]
|
|
|
777 NAME 2_5.8_Amoebozoa_58S_start_four_long
|
|
|
778 LENG 45
|
|
|
779 ALPH DNA
|
|
|
780 RF no
|
|
|
781 CS no
|
|
|
782 MAP yes
|
|
|
783 DATE Fri Jan 20 22:47:33 2012
|
|
|
784 NSEQ 3
|
|
|
785 EFFN 3.000000
|
|
|
786 CKSUM 3037931376
|
|
|
787 STATS LOCAL MSV -8.1113 0.72021
|
|
|
788 STATS LOCAL VITERBI -7.5925 0.72021
|
|
|
789 STATS LOCAL FORWARD -4.1062 0.72021
|
|
|
790 HMM A C G T
|
|
|
791 m->m m->i m->d i->m i->i d->m d->d
|
|
|
792 COMPO 1.55125 1.20479 1.38724 1.43339
|
|
|
793 1.38629 1.38629 1.38629 1.38629
|
|
|
794 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
|
|
|
795 1 3.30705 0.14631 3.36166 2.73626 1 - -
|
|
|
796 1.38629 1.38629 1.38629 1.38629
|
|
|
797 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
798 2 0.15719 3.27118 2.73043 3.16274 2 - -
|
|
|
799 1.38629 1.38629 1.38629 1.38629
|
|
|
800 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
801 3 3.30705 0.14631 3.36166 2.73626 3 - -
|
|
|
802 1.38629 1.38629 1.38629 1.38629
|
|
|
803 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
804 4 2.97980 2.52563 3.03204 0.19727 4 - -
|
|
|
805 1.38629 1.38629 1.38629 1.38629
|
|
|
806 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
807 5 3.30705 0.14631 3.36166 2.73626 5 - -
|
|
|
808 1.38629 1.38629 1.38629 1.38629
|
|
|
809 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
810 6 0.15719 3.27118 2.73043 3.16274 6 - -
|
|
|
811 1.38629 1.38629 1.38629 1.38629
|
|
|
812 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
813 7 2.97980 2.52563 3.03204 0.19727 7 - -
|
|
|
814 1.38629 1.38629 1.38629 1.38629
|
|
|
815 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
816 8 0.15719 3.27118 2.73043 3.16274 8 - -
|
|
|
817 1.38629 1.38629 1.38629 1.38629
|
|
|
818 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
819 9 3.30705 0.14631 3.36166 2.73626 9 - -
|
|
|
820 1.38629 1.38629 1.38629 1.38629
|
|
|
821 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
822 10 3.30705 0.14631 3.36166 2.73626 10 - -
|
|
|
823 1.38629 1.38629 1.38629 1.38629
|
|
|
824 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
825 11 0.15719 3.27118 2.73043 3.16274 11 - -
|
|
|
826 1.38629 1.38629 1.38629 1.38629
|
|
|
827 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
828 12 3.30705 0.14631 3.36166 2.73626 12 - -
|
|
|
829 1.38629 1.38629 1.38629 1.38629
|
|
|
830 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
831 13 3.30705 0.14631 3.36166 2.73626 13 - -
|
|
|
832 1.38629 1.38629 1.38629 1.38629
|
|
|
833 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
834 14 2.86982 3.47591 0.13017 3.36931 14 - -
|
|
|
835 1.38629 1.38629 1.38629 1.38629
|
|
|
836 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
837 15 2.97980 2.52563 3.03204 0.19727 15 - -
|
|
|
838 1.38629 1.38629 1.38629 1.38629
|
|
|
839 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
840 16 2.97980 2.52563 3.03204 0.19727 16 - -
|
|
|
841 1.38629 1.38629 1.38629 1.38629
|
|
|
842 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
843 17 0.15719 3.27118 2.73043 3.16274 17 - -
|
|
|
844 1.38629 1.38629 1.38629 1.38629
|
|
|
845 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
846 18 2.86982 3.47591 0.13017 3.36931 18 - -
|
|
|
847 1.38629 1.38629 1.38629 1.38629
|
|
|
848 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
849 19 2.86982 3.47591 0.13017 3.36931 19 - -
|
|
|
850 1.38629 1.38629 1.38629 1.38629
|
|
|
851 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
852 20 3.30705 0.14631 3.36166 2.73626 20 - -
|
|
|
853 1.38629 1.38629 1.38629 1.38629
|
|
|
854 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
855 21 2.86982 3.47591 0.13017 3.36931 21 - -
|
|
|
856 1.38629 1.38629 1.38629 1.38629
|
|
|
857 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
858 22 0.15719 3.27118 2.73043 3.16274 22 - -
|
|
|
859 1.38629 1.38629 1.38629 1.38629
|
|
|
860 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
861 23 2.97980 2.52563 3.03204 0.19727 23 - -
|
|
|
862 1.38629 1.38629 1.38629 1.38629
|
|
|
863 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
864 24 2.86982 3.47591 0.13017 3.36931 24 - -
|
|
|
865 1.38629 1.38629 1.38629 1.38629
|
|
|
866 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
867 25 2.86982 3.47591 0.13017 3.36931 25 - -
|
|
|
868 1.38629 1.38629 1.38629 1.38629
|
|
|
869 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
870 26 0.15719 3.27118 2.73043 3.16274 26 - -
|
|
|
871 1.38629 1.38629 1.38629 1.38629
|
|
|
872 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
873 27 2.97980 2.52563 3.03204 0.19727 27 - -
|
|
|
874 1.38629 1.38629 1.38629 1.38629
|
|
|
875 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
876 28 2.97980 2.52563 3.03204 0.19727 28 - -
|
|
|
877 1.38629 1.38629 1.38629 1.38629
|
|
|
878 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
879 29 2.86982 3.47591 0.13017 3.36931 29 - -
|
|
|
880 1.38629 1.38629 1.38629 1.38629
|
|
|
881 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
882 30 3.30705 0.14631 3.36166 2.73626 30 - -
|
|
|
883 1.38629 1.38629 1.38629 1.38629
|
|
|
884 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
885 31 2.97980 2.52563 3.03204 0.19727 31 - -
|
|
|
886 1.38629 1.38629 1.38629 1.38629
|
|
|
887 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
888 32 0.15719 3.27118 2.73043 3.16274 32 - -
|
|
|
889 1.38629 1.38629 1.38629 1.38629
|
|
|
890 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
891 33 2.86982 3.47591 0.13017 3.36931 33 - -
|
|
|
892 1.38629 1.38629 1.38629 1.38629
|
|
|
893 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
894 34 2.86982 3.47591 0.13017 3.36931 34 - -
|
|
|
895 1.38629 1.38629 1.38629 1.38629
|
|
|
896 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
897 35 2.97980 2.52563 3.03204 0.19727 35 - -
|
|
|
898 1.38629 1.38629 1.38629 1.38629
|
|
|
899 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
900 36 0.15719 3.27118 2.73043 3.16274 36 - -
|
|
|
901 1.38629 1.38629 1.38629 1.38629
|
|
|
902 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
903 37 3.30705 0.14631 3.36166 2.73626 37 - -
|
|
|
904 1.38629 1.38629 1.38629 1.38629
|
|
|
905 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
906 38 3.30705 0.14631 3.36166 2.73626 38 - -
|
|
|
907 1.38629 1.38629 1.38629 1.38629
|
|
|
908 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
909 39 3.30705 0.14631 3.36166 2.73626 39 - -
|
|
|
910 1.38629 1.38629 1.38629 1.38629
|
|
|
911 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
912 40 2.86982 3.47591 0.13017 3.36931 40 - -
|
|
|
913 1.38629 1.38629 1.38629 1.38629
|
|
|
914 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
915 41 3.30705 0.14631 3.36166 2.73626 41 - -
|
|
|
916 1.38629 1.38629 1.38629 1.38629
|
|
|
917 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
918 42 2.97980 2.52563 3.03204 0.19727 42 - -
|
|
|
919 1.38629 1.38629 1.38629 1.38629
|
|
|
920 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
921 43 2.97980 2.52563 3.03204 0.19727 43 - -
|
|
|
922 1.38629 1.38629 1.38629 1.38629
|
|
|
923 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
924 44 3.30705 0.14631 3.36166 2.73626 44 - -
|
|
|
925 1.38629 1.38629 1.38629 1.38629
|
|
|
926 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
927 45 2.86982 3.47591 0.13017 3.36931 45 - -
|
|
|
928 1.38629 1.38629 1.38629 1.38629
|
|
|
929 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
|
|
|
930 //
|
|
|
931 HMMER3/b [3.0 | March 2010]
|
|
|
932 NAME 2_5.8_Amoebozoa_58S_start_one_long
|
|
|
933 LENG 45
|
|
|
934 ALPH DNA
|
|
|
935 RF no
|
|
|
936 CS no
|
|
|
937 MAP yes
|
|
|
938 DATE Fri Jan 20 22:47:04 2012
|
|
|
939 NSEQ 2
|
|
|
940 EFFN 2.000000
|
|
|
941 CKSUM 3357680575
|
|
|
942 STATS LOCAL MSV -7.5301 0.72805
|
|
|
943 STATS LOCAL VITERBI -8.1447 0.72805
|
|
|
944 STATS LOCAL FORWARD -3.6436 0.72805
|
|
|
945 HMM A C G T
|
|
|
946 m->m m->i m->d i->m i->i d->m d->d
|
|
|
947 COMPO 1.52137 1.28488 1.38085 1.37225
|
|
|
948 1.38629 1.38629 1.38629 1.38629
|
|
|
949 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
|
950 1 0.23862 2.84929 2.43386 2.70756 1 - -
|
|
|
951 1.38629 1.38629 1.38629 1.38629
|
|
|
952 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
953 2 2.81865 0.23582 2.88868 2.35662 2 - -
|
|
|
954 1.38629 1.38629 1.38629 1.38629
|
|
|
955 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
956 3 0.23862 2.84929 2.43386 2.70756 3 - -
|
|
|
957 1.38629 1.38629 1.38629 1.38629
|
|
|
958 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
959 4 2.57915 2.25909 2.64442 0.28946 4 - -
|
|
|
960 1.38629 1.38629 1.38629 1.38629
|
|
|
961 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
962 5 2.57915 2.25909 2.64442 0.28946 5 - -
|
|
|
963 1.38629 1.38629 1.38629 1.38629
|
|
|
964 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
965 6 2.81865 0.23582 2.88868 2.35662 6 - -
|
|
|
966 1.38629 1.38629 1.38629 1.38629
|
|
|
967 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
968 7 2.57915 2.25909 2.64442 0.28946 7 - -
|
|
|
969 1.38629 1.38629 1.38629 1.38629
|
|
|
970 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
971 8 0.23862 2.84929 2.43386 2.70756 8 - -
|
|
|
972 1.38629 1.38629 1.38629 1.38629
|
|
|
973 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
974 9 2.81865 0.23582 2.88868 2.35662 9 - -
|
|
|
975 1.38629 1.38629 1.38629 1.38629
|
|
|
976 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
977 10 2.81865 0.23582 2.88868 2.35662 10 - -
|
|
|
978 1.38629 1.38629 1.38629 1.38629
|
|
|
979 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
980 11 0.23862 2.84929 2.43386 2.70756 11 - -
|
|
|
981 1.38629 1.38629 1.38629 1.38629
|
|
|
982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
983 12 2.81865 0.23582 2.88868 2.35662 12 - -
|
|
|
984 1.38629 1.38629 1.38629 1.38629
|
|
|
985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
986 13 2.81865 0.23582 2.88868 2.35662 13 - -
|
|
|
987 1.38629 1.38629 1.38629 1.38629
|
|
|
988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
989 14 2.53331 3.02441 0.20344 2.88069 14 - -
|
|
|
990 1.38629 1.38629 1.38629 1.38629
|
|
|
991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
992 15 2.57915 2.25909 2.64442 0.28946 15 - -
|
|
|
993 1.38629 1.38629 1.38629 1.38629
|
|
|
994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
995 16 2.57915 2.25909 2.64442 0.28946 16 - -
|
|
|
996 1.38629 1.38629 1.38629 1.38629
|
|
|
997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
998 17 0.23862 2.84929 2.43386 2.70756 17 - -
|
|
|
999 1.38629 1.38629 1.38629 1.38629
|
|
|
1000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1001 18 2.53331 3.02441 0.20344 2.88069 18 - -
|
|
|
1002 1.38629 1.38629 1.38629 1.38629
|
|
|
1003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1004 19 2.53331 3.02441 0.20344 2.88069 19 - -
|
|
|
1005 1.38629 1.38629 1.38629 1.38629
|
|
|
1006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1007 20 2.81865 0.23582 2.88868 2.35662 20 - -
|
|
|
1008 1.38629 1.38629 1.38629 1.38629
|
|
|
1009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1010 21 2.53331 3.02441 0.20344 2.88069 21 - -
|
|
|
1011 1.38629 1.38629 1.38629 1.38629
|
|
|
1012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1013 22 0.23862 2.84929 2.43386 2.70756 22 - -
|
|
|
1014 1.38629 1.38629 1.38629 1.38629
|
|
|
1015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1016 23 2.57915 2.25909 2.64442 0.28946 23 - -
|
|
|
1017 1.38629 1.38629 1.38629 1.38629
|
|
|
1018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1019 24 2.53331 3.02441 0.20344 2.88069 24 - -
|
|
|
1020 1.38629 1.38629 1.38629 1.38629
|
|
|
1021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1022 25 2.53331 3.02441 0.20344 2.88069 25 - -
|
|
|
1023 1.38629 1.38629 1.38629 1.38629
|
|
|
1024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1025 26 0.23862 2.84929 2.43386 2.70756 26 - -
|
|
|
1026 1.38629 1.38629 1.38629 1.38629
|
|
|
1027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1028 27 2.57915 2.25909 2.64442 0.28946 27 - -
|
|
|
1029 1.38629 1.38629 1.38629 1.38629
|
|
|
1030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1031 28 2.57915 2.25909 2.64442 0.28946 28 - -
|
|
|
1032 1.38629 1.38629 1.38629 1.38629
|
|
|
1033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1034 29 2.53331 3.02441 0.20344 2.88069 29 - -
|
|
|
1035 1.38629 1.38629 1.38629 1.38629
|
|
|
1036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1037 30 2.81865 0.23582 2.88868 2.35662 30 - -
|
|
|
1038 1.38629 1.38629 1.38629 1.38629
|
|
|
1039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1040 31 2.57915 2.25909 2.64442 0.28946 31 - -
|
|
|
1041 1.38629 1.38629 1.38629 1.38629
|
|
|
1042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1043 32 0.23862 2.84929 2.43386 2.70756 32 - -
|
|
|
1044 1.38629 1.38629 1.38629 1.38629
|
|
|
1045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1046 33 2.53331 3.02441 0.20344 2.88069 33 - -
|
|
|
1047 1.38629 1.38629 1.38629 1.38629
|
|
|
1048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1049 34 2.53331 3.02441 0.20344 2.88069 34 - -
|
|
|
1050 1.38629 1.38629 1.38629 1.38629
|
|
|
1051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1052 35 2.57915 2.25909 2.64442 0.28946 35 - -
|
|
|
1053 1.38629 1.38629 1.38629 1.38629
|
|
|
1054 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1055 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
|
1056 1.38629 1.38629 1.38629 1.38629
|
|
|
1057 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1058 37 2.81865 0.23582 2.88868 2.35662 37 - -
|
|
|
1059 1.38629 1.38629 1.38629 1.38629
|
|
|
1060 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1061 38 2.81865 0.23582 2.88868 2.35662 38 - -
|
|
|
1062 1.38629 1.38629 1.38629 1.38629
|
|
|
1063 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1064 39 2.81865 0.23582 2.88868 2.35662 39 - -
|
|
|
1065 1.38629 1.38629 1.38629 1.38629
|
|
|
1066 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1067 40 2.53331 3.02441 0.20344 2.88069 40 - -
|
|
|
1068 1.38629 1.38629 1.38629 1.38629
|
|
|
1069 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1070 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
|
1071 1.38629 1.38629 1.38629 1.38629
|
|
|
1072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1073 42 2.57915 2.25909 2.64442 0.28946 42 - -
|
|
|
1074 1.38629 1.38629 1.38629 1.38629
|
|
|
1075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1076 43 2.57915 2.25909 2.64442 0.28946 43 - -
|
|
|
1077 1.38629 1.38629 1.38629 1.38629
|
|
|
1078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1079 44 2.81865 0.23582 2.88868 2.35662 44 - -
|
|
|
1080 1.38629 1.38629 1.38629 1.38629
|
|
|
1081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1082 45 2.53331 3.02441 0.20344 2.88069 45 - -
|
|
|
1083 1.38629 1.38629 1.38629 1.38629
|
|
|
1084 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
|
1085 //
|
|
|
1086 HMMER3/b [3.0 | March 2010]
|
|
|
1087 NAME 2_5.8_Amoebozoa_58S_start_three_long
|
|
|
1088 LENG 45
|
|
|
1089 ALPH DNA
|
|
|
1090 RF no
|
|
|
1091 CS no
|
|
|
1092 MAP yes
|
|
|
1093 DATE Fri Jan 20 22:47:24 2012
|
|
|
1094 NSEQ 2
|
|
|
1095 EFFN 2.000000
|
|
|
1096 CKSUM 993253840
|
|
|
1097 STATS LOCAL MSV -7.5156 0.72805
|
|
|
1098 STATS LOCAL VITERBI -8.1384 0.72805
|
|
|
1099 STATS LOCAL FORWARD -3.5209 0.72805
|
|
|
1100 HMM A C G T
|
|
|
1101 m->m m->i m->d i->m i->i d->m d->d
|
|
|
1102 COMPO 1.52247 1.28387 1.38089 1.37236
|
|
|
1103 1.38629 1.38629 1.38629 1.38629
|
|
|
1104 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
|
1105 1 2.81865 0.23582 2.88868 2.35662 1 - -
|
|
|
1106 1.38629 1.38629 1.38629 1.38629
|
|
|
1107 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1108 2 0.23862 2.84929 2.43386 2.70756 2 - -
|
|
|
1109 1.38629 1.38629 1.38629 1.38629
|
|
|
1110 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1111 3 0.23862 2.84929 2.43386 2.70756 3 - -
|
|
|
1112 1.38629 1.38629 1.38629 1.38629
|
|
|
1113 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1114 4 2.57915 2.25909 2.64442 0.28946 4 - -
|
|
|
1115 1.38629 1.38629 1.38629 1.38629
|
|
|
1116 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1117 5 2.81865 0.23582 2.88868 2.35662 5 - -
|
|
|
1118 1.38629 1.38629 1.38629 1.38629
|
|
|
1119 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1120 6 2.57915 2.25909 2.64442 0.28946 6 - -
|
|
|
1121 1.38629 1.38629 1.38629 1.38629
|
|
|
1122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1123 7 2.57915 2.25909 2.64442 0.28946 7 - -
|
|
|
1124 1.38629 1.38629 1.38629 1.38629
|
|
|
1125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1126 8 0.23862 2.84929 2.43386 2.70756 8 - -
|
|
|
1127 1.38629 1.38629 1.38629 1.38629
|
|
|
1128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1129 9 2.81865 0.23582 2.88868 2.35662 9 - -
|
|
|
1130 1.38629 1.38629 1.38629 1.38629
|
|
|
1131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1132 10 2.81865 0.23582 2.88868 2.35662 10 - -
|
|
|
1133 1.38629 1.38629 1.38629 1.38629
|
|
|
1134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1135 11 0.23862 2.84929 2.43386 2.70756 11 - -
|
|
|
1136 1.38629 1.38629 1.38629 1.38629
|
|
|
1137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1138 12 2.81865 0.23582 2.88868 2.35662 12 - -
|
|
|
1139 1.38629 1.38629 1.38629 1.38629
|
|
|
1140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1141 13 2.81865 0.23582 2.88868 2.35662 13 - -
|
|
|
1142 1.38629 1.38629 1.38629 1.38629
|
|
|
1143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1144 14 2.53331 3.02441 0.20344 2.88069 14 - -
|
|
|
1145 1.38629 1.38629 1.38629 1.38629
|
|
|
1146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1147 15 2.57915 2.25909 2.64442 0.28946 15 - -
|
|
|
1148 1.38629 1.38629 1.38629 1.38629
|
|
|
1149 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1150 16 2.57915 2.25909 2.64442 0.28946 16 - -
|
|
|
1151 1.38629 1.38629 1.38629 1.38629
|
|
|
1152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1153 17 0.23862 2.84929 2.43386 2.70756 17 - -
|
|
|
1154 1.38629 1.38629 1.38629 1.38629
|
|
|
1155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1156 18 2.53331 3.02441 0.20344 2.88069 18 - -
|
|
|
1157 1.38629 1.38629 1.38629 1.38629
|
|
|
1158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1159 19 2.53331 3.02441 0.20344 2.88069 19 - -
|
|
|
1160 1.38629 1.38629 1.38629 1.38629
|
|
|
1161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1162 20 2.81865 0.23582 2.88868 2.35662 20 - -
|
|
|
1163 1.38629 1.38629 1.38629 1.38629
|
|
|
1164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1165 21 2.53331 3.02441 0.20344 2.88069 21 - -
|
|
|
1166 1.38629 1.38629 1.38629 1.38629
|
|
|
1167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1168 22 0.23862 2.84929 2.43386 2.70756 22 - -
|
|
|
1169 1.38629 1.38629 1.38629 1.38629
|
|
|
1170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1171 23 2.57915 2.25909 2.64442 0.28946 23 - -
|
|
|
1172 1.38629 1.38629 1.38629 1.38629
|
|
|
1173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1174 24 2.53331 3.02441 0.20344 2.88069 24 - -
|
|
|
1175 1.38629 1.38629 1.38629 1.38629
|
|
|
1176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1177 25 2.53331 3.02441 0.20344 2.88069 25 - -
|
|
|
1178 1.38629 1.38629 1.38629 1.38629
|
|
|
1179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1180 26 0.23862 2.84929 2.43386 2.70756 26 - -
|
|
|
1181 1.38629 1.38629 1.38629 1.38629
|
|
|
1182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1183 27 2.57915 2.25909 2.64442 0.28946 27 - -
|
|
|
1184 1.38629 1.38629 1.38629 1.38629
|
|
|
1185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1186 28 2.57915 2.25909 2.64442 0.28946 28 - -
|
|
|
1187 1.38629 1.38629 1.38629 1.38629
|
|
|
1188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1189 29 2.53331 3.02441 0.20344 2.88069 29 - -
|
|
|
1190 1.38629 1.38629 1.38629 1.38629
|
|
|
1191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1192 30 2.81865 0.23582 2.88868 2.35662 30 - -
|
|
|
1193 1.38629 1.38629 1.38629 1.38629
|
|
|
1194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1195 31 2.57915 2.25909 2.64442 0.28946 31 - -
|
|
|
1196 1.38629 1.38629 1.38629 1.38629
|
|
|
1197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1198 32 0.23862 2.84929 2.43386 2.70756 32 - -
|
|
|
1199 1.38629 1.38629 1.38629 1.38629
|
|
|
1200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1201 33 2.53331 3.02441 0.20344 2.88069 33 - -
|
|
|
1202 1.38629 1.38629 1.38629 1.38629
|
|
|
1203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1204 34 2.53331 3.02441 0.20344 2.88069 34 - -
|
|
|
1205 1.38629 1.38629 1.38629 1.38629
|
|
|
1206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1207 35 2.57915 2.25909 2.64442 0.28946 35 - -
|
|
|
1208 1.38629 1.38629 1.38629 1.38629
|
|
|
1209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1210 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
|
1211 1.38629 1.38629 1.38629 1.38629
|
|
|
1212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1213 37 2.81865 0.23582 2.88868 2.35662 37 - -
|
|
|
1214 1.38629 1.38629 1.38629 1.38629
|
|
|
1215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1216 38 2.81865 0.23582 2.88868 2.35662 38 - -
|
|
|
1217 1.38629 1.38629 1.38629 1.38629
|
|
|
1218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1219 39 2.81865 0.23582 2.88868 2.35662 39 - -
|
|
|
1220 1.38629 1.38629 1.38629 1.38629
|
|
|
1221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1222 40 2.53331 3.02441 0.20344 2.88069 40 - -
|
|
|
1223 1.38629 1.38629 1.38629 1.38629
|
|
|
1224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1225 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
|
1226 1.38629 1.38629 1.38629 1.38629
|
|
|
1227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1228 42 2.57915 2.25909 2.64442 0.28946 42 - -
|
|
|
1229 1.38629 1.38629 1.38629 1.38629
|
|
|
1230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1231 43 2.57915 2.25909 2.64442 0.28946 43 - -
|
|
|
1232 1.38629 1.38629 1.38629 1.38629
|
|
|
1233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1234 44 2.81865 0.23582 2.88868 2.35662 44 - -
|
|
|
1235 1.38629 1.38629 1.38629 1.38629
|
|
|
1236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
|
1237 45 2.53331 3.02441 0.20344 2.88069 45 - -
|
|
|
1238 1.38629 1.38629 1.38629 1.38629
|
|
|
1239 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
|
1240 //
|
|
|
1241 HMMER3/b [3.0 | March 2010]
|
|
|
1242 NAME 2_5.8_Amoebozoa_58S_start_two_long
|
|
|
1243 LENG 45
|
|
|
1244 ALPH DNA
|
|
|
1245 RF no
|
|
|
1246 CS no
|
|
|
1247 MAP yes
|
|
|
1248 DATE Fri Jan 20 22:47:15 2012
|
|
|
1249 NSEQ 4
|
|
|
1250 EFFN 3.175781
|
|
|
1251 CKSUM 253078905
|
|
|
1252 STATS LOCAL MSV -8.1442 0.71933
|
|
|
1253 STATS LOCAL VITERBI -7.5796 0.71933
|
|
|
1254 STATS LOCAL FORWARD -4.2294 0.71933
|
|
|
1255 HMM A C G T
|
|
|
1256 m->m m->i m->d i->m i->i d->m d->d
|
|
|
1257 COMPO 1.47959 1.15119 1.38788 1.57791
|
|
|
1258 1.38629 1.38629 1.38629 1.38629
|
|
|
1259 0.03791 3.98449 3.98449 1.46634 0.26236 0.00000 *
|
|
|
1260 1 3.37748 0.13704 3.42926 2.78832 1 - -
|
|
|
1261 1.38629 1.38629 1.38629 1.38629
|
|
|
1262 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1263 2 0.14843 3.33206 2.77050 3.22920 2 - -
|
|
|
1264 1.38629 1.38629 1.38629 1.38629
|
|
|
1265 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1266 3 3.37748 0.13704 3.42926 2.78832 3 - -
|
|
|
1267 1.38629 1.38629 1.38629 1.38629
|
|
|
1268 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1269 4 3.37748 0.13704 3.42926 2.78832 4 - -
|
|
|
1270 1.38629 1.38629 1.38629 1.38629
|
|
|
1271 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1272 5 3.37748 0.13704 3.42926 2.78832 5 - -
|
|
|
1273 1.38629 1.38629 1.38629 1.38629
|
|
|
1274 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1275 6 0.14843 3.33206 2.77050 3.22920 6 - -
|
|
|
1276 1.38629 1.38629 1.38629 1.38629
|
|
|
1277 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1278 7 3.04021 2.56430 3.09020 0.18668 7 - -
|
|
|
1279 1.38629 1.38629 1.38629 1.38629
|
|
|
1280 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1281 8 0.14843 3.33206 2.77050 3.22920 8 - -
|
|
|
1282 1.38629 1.38629 1.38629 1.38629
|
|
|
1283 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1284 9 3.37748 0.13704 3.42926 2.78832 9 - -
|
|
|
1285 1.38629 1.38629 1.38629 1.38629
|
|
|
1286 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1287 10 3.37748 0.13704 3.42926 2.78832 10 - -
|
|
|
1288 1.38629 1.38629 1.38629 1.38629
|
|
|
1289 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1290 11 0.14843 3.33206 2.77050 3.22920 11 - -
|
|
|
1291 1.38629 1.38629 1.38629 1.38629
|
|
|
1292 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1293 12 3.37748 0.13704 3.42926 2.78832 12 - -
|
|
|
1294 1.38629 1.38629 1.38629 1.38629
|
|
|
1295 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1296 13 3.37748 0.13704 3.42926 2.78832 13 - -
|
|
|
1297 1.38629 1.38629 1.38629 1.38629
|
|
|
1298 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1299 14 2.91360 3.53861 0.12268 3.43825 14 - -
|
|
|
1300 1.38629 1.38629 1.38629 1.38629
|
|
|
1301 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1302 15 3.04021 2.56430 3.09020 0.18668 15 - -
|
|
|
1303 1.38629 1.38629 1.38629 1.38629
|
|
|
1304 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1305 16 0.14843 3.33206 2.77050 3.22920 16 - -
|
|
|
1306 1.38629 1.38629 1.38629 1.38629
|
|
|
1307 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1308 17 0.14843 3.33206 2.77050 3.22920 17 - -
|
|
|
1309 1.38629 1.38629 1.38629 1.38629
|
|
|
1310 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1311 18 2.91360 3.53861 0.12268 3.43825 18 - -
|
|
|
1312 1.38629 1.38629 1.38629 1.38629
|
|
|
1313 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1314 19 2.91360 3.53861 0.12268 3.43825 19 - -
|
|
|
1315 1.38629 1.38629 1.38629 1.38629
|
|
|
1316 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1317 20 3.37748 0.13704 3.42926 2.78832 20 - -
|
|
|
1318 1.38629 1.38629 1.38629 1.38629
|
|
|
1319 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1320 21 2.91360 3.53861 0.12268 3.43825 21 - -
|
|
|
1321 1.38629 1.38629 1.38629 1.38629
|
|
|
1322 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1323 22 0.14843 3.33206 2.77050 3.22920 22 - -
|
|
|
1324 1.38629 1.38629 1.38629 1.38629
|
|
|
1325 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1326 23 3.04021 2.56430 3.09020 0.18668 23 - -
|
|
|
1327 1.38629 1.38629 1.38629 1.38629
|
|
|
1328 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1329 24 2.91360 3.53861 0.12268 3.43825 24 - -
|
|
|
1330 1.38629 1.38629 1.38629 1.38629
|
|
|
1331 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1332 25 2.91360 3.53861 0.12268 3.43825 25 - -
|
|
|
1333 1.38629 1.38629 1.38629 1.38629
|
|
|
1334 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1335 26 0.14843 3.33206 2.77050 3.22920 26 - -
|
|
|
1336 1.38629 1.38629 1.38629 1.38629
|
|
|
1337 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1338 27 3.04021 2.56430 3.09020 0.18668 27 - -
|
|
|
1339 1.38629 1.38629 1.38629 1.38629
|
|
|
1340 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1341 28 3.04021 2.56430 3.09020 0.18668 28 - -
|
|
|
1342 1.38629 1.38629 1.38629 1.38629
|
|
|
1343 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1344 29 2.91360 3.53861 0.12268 3.43825 29 - -
|
|
|
1345 1.38629 1.38629 1.38629 1.38629
|
|
|
1346 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1347 30 3.37748 0.13704 3.42926 2.78832 30 - -
|
|
|
1348 1.38629 1.38629 1.38629 1.38629
|
|
|
1349 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1350 31 3.04021 2.56430 3.09020 0.18668 31 - -
|
|
|
1351 1.38629 1.38629 1.38629 1.38629
|
|
|
1352 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1353 32 0.14843 3.33206 2.77050 3.22920 32 - -
|
|
|
1354 1.38629 1.38629 1.38629 1.38629
|
|
|
1355 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1356 33 2.91360 3.53861 0.12268 3.43825 33 - -
|
|
|
1357 1.38629 1.38629 1.38629 1.38629
|
|
|
1358 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1359 34 2.91360 3.53861 0.12268 3.43825 34 - -
|
|
|
1360 1.38629 1.38629 1.38629 1.38629
|
|
|
1361 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1362 35 3.04021 2.56430 3.09020 0.18668 35 - -
|
|
|
1363 1.38629 1.38629 1.38629 1.38629
|
|
|
1364 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1365 36 0.14843 3.33206 2.77050 3.22920 36 - -
|
|
|
1366 1.38629 1.38629 1.38629 1.38629
|
|
|
1367 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1368 37 3.37748 0.13704 3.42926 2.78832 37 - -
|
|
|
1369 1.38629 1.38629 1.38629 1.38629
|
|
|
1370 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1371 38 3.37748 0.13704 3.42926 2.78832 38 - -
|
|
|
1372 1.38629 1.38629 1.38629 1.38629
|
|
|
1373 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1374 39 3.37748 0.13704 3.42926 2.78832 39 - -
|
|
|
1375 1.38629 1.38629 1.38629 1.38629
|
|
|
1376 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1377 40 2.91360 3.53861 0.12268 3.43825 40 - -
|
|
|
1378 1.38629 1.38629 1.38629 1.38629
|
|
|
1379 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1380 41 3.37748 0.13704 3.42926 2.78832 41 - -
|
|
|
1381 1.38629 1.38629 1.38629 1.38629
|
|
|
1382 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1383 42 3.04021 2.56430 3.09020 0.18668 42 - -
|
|
|
1384 1.38629 1.38629 1.38629 1.38629
|
|
|
1385 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1386 43 3.04021 2.56430 3.09020 0.18668 43 - -
|
|
|
1387 1.38629 1.38629 1.38629 1.38629
|
|
|
1388 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1389 44 3.37748 0.13704 3.42926 2.78832 44 - -
|
|
|
1390 1.38629 1.38629 1.38629 1.38629
|
|
|
1391 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
1392 45 2.91360 3.53861 0.12268 3.43825 45 - -
|
|
|
1393 1.38629 1.38629 1.38629 1.38629
|
|
|
1394 0.01914 3.96571 * 1.46634 0.26236 0.00000 *
|
|
|
1395 //
|
|
|
1396 HMMER3/b [3.0 | March 2010]
|
|
|
1397 NAME 4_LSU_Amoebozoa_4_LSU_start_onea_long
|
|
|
1398 LENG 45
|
|
|
1399 ALPH DNA
|
|
|
1400 RF no
|
|
|
1401 CS no
|
|
|
1402 MAP yes
|
|
|
1403 DATE Fri Jan 20 23:25:49 2012
|
|
|
1404 NSEQ 51
|
|
|
1405 EFFN 3.408508
|
|
|
1406 CKSUM 3712596225
|
|
|
1407 STATS LOCAL MSV -7.7739 0.71932
|
|
|
1408 STATS LOCAL VITERBI -7.6712 0.71932
|
|
|
1409 STATS LOCAL FORWARD -4.0000 0.71932
|
|
|
1410 HMM A C G T
|
|
|
1411 m->m m->i m->d i->m i->i d->m d->d
|
|
|
1412 COMPO 0.96530 1.36587 1.68894 1.71893
|
|
|
1413 1.38629 1.38629 1.38629 1.38629
|
|
|
1414 0.03631 4.02687 4.02687 1.46634 0.26236 0.00000 *
|
|
|
1415 1 2.68706 3.32674 0.16517 3.03111 1 - -
|
|
|
1416 1.38629 1.38629 1.38629 1.38629
|
|
|
1417 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1418 2 3.46430 0.12655 3.51242 2.85165 2 - -
|
|
|
1419 1.38629 1.38629 1.38629 1.38629
|
|
|
1420 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1421 3 0.16058 3.32313 2.62437 3.22332 3 - -
|
|
|
1422 1.38629 1.38629 1.38629 1.38629
|
|
|
1423 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1424 4 0.13837 3.40735 2.81949 3.31159 4 - -
|
|
|
1425 1.38629 1.38629 1.38629 1.38629
|
|
|
1426 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1427 5 2.96633 3.61517 0.11420 3.52270 5 - -
|
|
|
1428 1.38629 1.38629 1.38629 1.38629
|
|
|
1429 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1430 6 0.13837 3.40735 2.81949 3.31159 6 - -
|
|
|
1431 1.38629 1.38629 1.38629 1.38629
|
|
|
1432 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1433 7 3.46430 0.12655 3.51242 2.85165 7 - -
|
|
|
1434 1.38629 1.38629 1.38629 1.38629
|
|
|
1435 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1436 8 3.46430 0.12655 3.51242 2.85165 8 - -
|
|
|
1437 1.38629 1.38629 1.38629 1.38629
|
|
|
1438 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1439 9 3.11604 2.61257 3.16314 0.17432 9 - -
|
|
|
1440 1.38629 1.38629 1.38629 1.38629
|
|
|
1441 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1442 10 3.46430 0.12655 3.51242 2.85165 10 - -
|
|
|
1443 1.38629 1.38629 1.38629 1.38629
|
|
|
1444 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1445 11 0.13837 3.40735 2.81949 3.31159 11 - -
|
|
|
1446 1.38629 1.38629 1.38629 1.38629
|
|
|
1447 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1448 12 0.13837 3.40735 2.81949 3.31159 12 - -
|
|
|
1449 1.38629 1.38629 1.38629 1.38629
|
|
|
1450 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1451 13 0.13837 3.40735 2.81949 3.31159 13 - -
|
|
|
1452 1.38629 1.38629 1.38629 1.38629
|
|
|
1453 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1454 14 3.11604 2.61257 3.16314 0.17432 14 - -
|
|
|
1455 1.38629 1.38629 1.38629 1.38629
|
|
|
1456 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1457 15 3.46430 0.12655 3.51242 2.85165 15 - -
|
|
|
1458 1.38629 1.38629 1.38629 1.38629
|
|
|
1459 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1460 16 0.13837 3.40735 2.81949 3.31159 16 - -
|
|
|
1461 1.38629 1.38629 1.38629 1.38629
|
|
|
1462 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1463 17 0.13837 3.40735 2.81949 3.31159 17 - -
|
|
|
1464 1.38629 1.38629 1.38629 1.38629
|
|
|
1465 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1466 18 0.17671 3.20419 2.73061 2.87869 18 - -
|
|
|
1467 1.38629 1.38629 1.38629 1.38629
|
|
|
1468 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1469 19 3.34985 0.15124 3.40150 2.63187 19 - -
|
|
|
1470 1.38629 1.38629 1.38629 1.38629
|
|
|
1471 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1472 20 0.13837 3.40735 2.81949 3.31159 20 - -
|
|
|
1473 1.38629 1.38629 1.38629 1.38629
|
|
|
1474 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1475 21 0.13837 3.40735 2.81949 3.31159 21 - -
|
|
|
1476 1.38629 1.38629 1.38629 1.38629
|
|
|
1477 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1478 22 2.96633 3.61517 0.11420 3.52270 22 - -
|
|
|
1479 1.38629 1.38629 1.38629 1.38629
|
|
|
1480 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1481 23 2.96633 3.61517 0.11420 3.52270 23 - -
|
|
|
1482 1.38629 1.38629 1.38629 1.38629
|
|
|
1483 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1484 24 0.13837 3.40735 2.81949 3.31159 24 - -
|
|
|
1485 1.38629 1.38629 1.38629 1.38629
|
|
|
1486 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1487 25 3.11604 2.61257 3.16314 0.17432 25 - -
|
|
|
1488 1.38629 1.38629 1.38629 1.38629
|
|
|
1489 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1490 26 0.13837 3.40735 2.81949 3.31159 26 - -
|
|
|
1491 1.38629 1.38629 1.38629 1.38629
|
|
|
1492 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1493 27 3.46430 0.12655 3.51242 2.85165 27 - -
|
|
|
1494 1.38629 1.38629 1.38629 1.38629
|
|
|
1495 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1496 28 3.46430 0.12655 3.51242 2.85165 28 - -
|
|
|
1497 1.38629 1.38629 1.38629 1.38629
|
|
|
1498 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1499 29 3.46430 0.12655 3.51242 2.85165 29 - -
|
|
|
1500 1.38629 1.38629 1.38629 1.38629
|
|
|
1501 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1502 30 2.96633 3.61517 0.11420 3.52270 30 - -
|
|
|
1503 1.38629 1.38629 1.38629 1.38629
|
|
|
1504 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1505 31 3.46430 0.12655 3.51242 2.85165 31 - -
|
|
|
1506 1.38629 1.38629 1.38629 1.38629
|
|
|
1507 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1508 32 3.11604 2.61257 3.16314 0.17432 32 - -
|
|
|
1509 1.38629 1.38629 1.38629 1.38629
|
|
|
1510 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1511 33 2.96633 3.61517 0.11420 3.52270 33 - -
|
|
|
1512 1.38629 1.38629 1.38629 1.38629
|
|
|
1513 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1514 34 0.13837 3.40735 2.81949 3.31159 34 - -
|
|
|
1515 1.38629 1.38629 1.38629 1.38629
|
|
|
1516 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1517 35 0.13837 3.40735 2.81949 3.31159 35 - -
|
|
|
1518 1.38629 1.38629 1.38629 1.38629
|
|
|
1519 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1520 36 2.44645 0.73953 2.51879 1.03422 36 - -
|
|
|
1521 1.38629 1.38629 1.38629 1.38629
|
|
|
1522 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1523 37 3.11604 2.61257 3.16314 0.17432 37 - -
|
|
|
1524 1.38629 1.38629 1.38629 1.38629
|
|
|
1525 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1526 38 3.11604 2.61257 3.16314 0.17432 38 - -
|
|
|
1527 1.38629 1.38629 1.38629 1.38629
|
|
|
1528 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1529 39 0.13837 3.40735 2.81949 3.31159 39 - -
|
|
|
1530 1.38629 1.38629 1.38629 1.38629
|
|
|
1531 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1532 40 0.13837 3.40735 2.81949 3.31159 40 - -
|
|
|
1533 1.38629 1.38629 1.38629 1.38629
|
|
|
1534 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1535 41 2.96633 3.61517 0.11420 3.52270 41 - -
|
|
|
1536 1.38629 1.38629 1.38629 1.38629
|
|
|
1537 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1538 42 3.46430 0.12655 3.51242 2.85165 42 - -
|
|
|
1539 1.38629 1.38629 1.38629 1.38629
|
|
|
1540 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1541 43 0.13837 3.40735 2.81949 3.31159 43 - -
|
|
|
1542 1.38629 1.38629 1.38629 1.38629
|
|
|
1543 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1544 44 3.11604 2.61257 3.16314 0.17432 44 - -
|
|
|
1545 1.38629 1.38629 1.38629 1.38629
|
|
|
1546 0.03631 4.02687 4.02687 1.46634 0.26236 1.09861 0.40547
|
|
|
1547 45 0.13837 3.40735 2.81949 3.31159 45 - -
|
|
|
1548 1.38629 1.38629 1.38629 1.38629
|
|
|
1549 0.01832 4.00888 * 1.46634 0.26236 0.00000 *
|
|
|
1550 //
|
|
|
1551 HMMER3/b [3.0 | March 2010]
|
|
|
1552 NAME 4_LSU_Amoebozoa_4_LSU_start_oneb_long
|
|
|
1553 LENG 45
|
|
|
1554 ALPH DNA
|
|
|
1555 RF no
|
|
|
1556 CS no
|
|
|
1557 MAP yes
|
|
|
1558 DATE Fri Jan 20 23:25:57 2012
|
|
|
1559 NSEQ 6
|
|
|
1560 EFFN 3.559570
|
|
|
1561 CKSUM 4179308964
|
|
|
1562 STATS LOCAL MSV -7.6411 0.71932
|
|
|
1563 STATS LOCAL VITERBI -7.6553 0.71932
|
|
|
1564 STATS LOCAL FORWARD -3.8849 0.71932
|
|
|
1565 HMM A C G T
|
|
|
1566 m->m m->i m->d i->m i->i d->m d->d
|
|
|
1567 COMPO 1.09739 1.36145 1.63014 1.54147
|
|
|
1568 1.38629 1.38629 1.38629 1.38629
|
|
|
1569 0.03534 4.05345 4.05345 1.46634 0.26236 0.00000 *
|
|
|
1570 1 2.09189 1.01591 0.96609 2.01061 1 - -
|
|
|
1571 1.38629 1.38629 1.38629 1.38629
|
|
|
1572 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1573 2 0.13263 3.45319 2.84909 3.36185 2 - -
|
|
|
1574 1.38629 1.38629 1.38629 1.38629
|
|
|
1575 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1576 3 3.16284 2.64227 3.20813 0.16716 3 - -
|
|
|
1577 1.38629 1.38629 1.38629 1.38629
|
|
|
1578 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1579 4 3.51693 0.12064 3.56276 2.88963 4 - -
|
|
|
1580 1.38629 1.38629 1.38629 1.38629
|
|
|
1581 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1582 5 2.99774 3.66122 0.10943 3.57364 5 - -
|
|
|
1583 1.38629 1.38629 1.38629 1.38629
|
|
|
1584 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1585 6 0.13263 3.45319 2.84909 3.36185 6 - -
|
|
|
1586 1.38629 1.38629 1.38629 1.38629
|
|
|
1587 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1588 7 3.51693 0.12064 3.56276 2.88963 7 - -
|
|
|
1589 1.38629 1.38629 1.38629 1.38629
|
|
|
1590 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1591 8 3.51693 0.12064 3.56276 2.88963 8 - -
|
|
|
1592 1.38629 1.38629 1.38629 1.38629
|
|
|
1593 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1594 9 3.16284 2.64227 3.20813 0.16716 9 - -
|
|
|
1595 1.38629 1.38629 1.38629 1.38629
|
|
|
1596 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1597 10 3.51693 0.12064 3.56276 2.88963 10 - -
|
|
|
1598 1.38629 1.38629 1.38629 1.38629
|
|
|
1599 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1600 11 0.13263 3.45319 2.84909 3.36185 11 - -
|
|
|
1601 1.38629 1.38629 1.38629 1.38629
|
|
|
1602 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1603 12 0.13263 3.45319 2.84909 3.36185 12 - -
|
|
|
1604 1.38629 1.38629 1.38629 1.38629
|
|
|
1605 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1606 13 0.13263 3.45319 2.84909 3.36185 13 - -
|
|
|
1607 1.38629 1.38629 1.38629 1.38629
|
|
|
1608 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1609 14 3.16284 2.64227 3.20813 0.16716 14 - -
|
|
|
1610 1.38629 1.38629 1.38629 1.38629
|
|
|
1611 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1612 15 3.51693 0.12064 3.56276 2.88963 15 - -
|
|
|
1613 1.38629 1.38629 1.38629 1.38629
|
|
|
1614 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1615 16 0.13263 3.45319 2.84909 3.36185 16 - -
|
|
|
1616 1.38629 1.38629 1.38629 1.38629
|
|
|
1617 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1618 17 0.13263 3.45319 2.84909 3.36185 17 - -
|
|
|
1619 1.38629 1.38629 1.38629 1.38629
|
|
|
1620 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1621 18 2.99774 3.66122 0.10943 3.57364 18 - -
|
|
|
1622 1.38629 1.38629 1.38629 1.38629
|
|
|
1623 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1624 19 3.16284 2.64227 3.20813 0.16716 19 - -
|
|
|
1625 1.38629 1.38629 1.38629 1.38629
|
|
|
1626 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1627 20 2.99774 3.66122 0.10943 3.57364 20 - -
|
|
|
1628 1.38629 1.38629 1.38629 1.38629
|
|
|
1629 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1630 21 0.13263 3.45319 2.84909 3.36185 21 - -
|
|
|
1631 1.38629 1.38629 1.38629 1.38629
|
|
|
1632 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1633 22 2.99774 3.66122 0.10943 3.57364 22 - -
|
|
|
1634 1.38629 1.38629 1.38629 1.38629
|
|
|
1635 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1636 23 0.13263 3.45319 2.84909 3.36185 23 - -
|
|
|
1637 1.38629 1.38629 1.38629 1.38629
|
|
|
1638 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1639 24 2.12338 2.17434 0.99832 0.92082 24 - -
|
|
|
1640 1.38629 1.38629 1.38629 1.38629
|
|
|
1641 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1642 25 3.16284 2.64227 3.20813 0.16716 25 - -
|
|
|
1643 1.38629 1.38629 1.38629 1.38629
|
|
|
1644 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1645 26 0.13263 3.45319 2.84909 3.36185 26 - -
|
|
|
1646 1.38629 1.38629 1.38629 1.38629
|
|
|
1647 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1648 27 3.51693 0.12064 3.56276 2.88963 27 - -
|
|
|
1649 1.38629 1.38629 1.38629 1.38629
|
|
|
1650 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1651 28 3.51693 0.12064 3.56276 2.88963 28 - -
|
|
|
1652 1.38629 1.38629 1.38629 1.38629
|
|
|
1653 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1654 29 3.51693 0.12064 3.56276 2.88963 29 - -
|
|
|
1655 1.38629 1.38629 1.38629 1.38629
|
|
|
1656 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1657 30 2.99774 3.66122 0.10943 3.57364 30 - -
|
|
|
1658 1.38629 1.38629 1.38629 1.38629
|
|
|
1659 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1660 31 3.51693 0.12064 3.56276 2.88963 31 - -
|
|
|
1661 1.38629 1.38629 1.38629 1.38629
|
|
|
1662 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1663 32 3.16284 2.64227 3.20813 0.16716 32 - -
|
|
|
1664 1.38629 1.38629 1.38629 1.38629
|
|
|
1665 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1666 33 2.99774 3.66122 0.10943 3.57364 33 - -
|
|
|
1667 1.38629 1.38629 1.38629 1.38629
|
|
|
1668 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1669 34 0.13263 3.45319 2.84909 3.36185 34 - -
|
|
|
1670 1.38629 1.38629 1.38629 1.38629
|
|
|
1671 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1672 35 0.13263 3.45319 2.84909 3.36185 35 - -
|
|
|
1673 1.38629 1.38629 1.38629 1.38629
|
|
|
1674 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1675 36 3.51693 0.12064 3.56276 2.88963 36 - -
|
|
|
1676 1.38629 1.38629 1.38629 1.38629
|
|
|
1677 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1678 37 3.16284 2.64227 3.20813 0.16716 37 - -
|
|
|
1679 1.38629 1.38629 1.38629 1.38629
|
|
|
1680 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1681 38 3.16284 2.64227 3.20813 0.16716 38 - -
|
|
|
1682 1.38629 1.38629 1.38629 1.38629
|
|
|
1683 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1684 39 0.13263 3.45319 2.84909 3.36185 39 - -
|
|
|
1685 1.38629 1.38629 1.38629 1.38629
|
|
|
1686 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1687 40 0.13263 3.45319 2.84909 3.36185 40 - -
|
|
|
1688 1.38629 1.38629 1.38629 1.38629
|
|
|
1689 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1690 41 2.99774 3.66122 0.10943 3.57364 41 - -
|
|
|
1691 1.38629 1.38629 1.38629 1.38629
|
|
|
1692 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1693 42 3.51693 0.12064 3.56276 2.88963 42 - -
|
|
|
1694 1.38629 1.38629 1.38629 1.38629
|
|
|
1695 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1696 43 0.13263 3.45319 2.84909 3.36185 43 - -
|
|
|
1697 1.38629 1.38629 1.38629 1.38629
|
|
|
1698 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1699 44 3.16284 2.64227 3.20813 0.16716 44 - -
|
|
|
1700 1.38629 1.38629 1.38629 1.38629
|
|
|
1701 0.03534 4.05345 4.05345 1.46634 0.26236 1.09861 0.40547
|
|
|
1702 45 0.13263 3.45319 2.84909 3.36185 45 - -
|
|
|
1703 1.38629 1.38629 1.38629 1.38629
|
|
|
1704 0.01783 4.03593 * 1.46634 0.26236 0.00000 *
|
|
|
1705 //
|
|
|
1706 HMMER3/b [3.0 | March 2010]
|
|
|
1707 NAME 4_LSU_Amoebozoa_4_LSU_start_onec_long
|
|
|
1708 LENG 45
|
|
|
1709 ALPH DNA
|
|
|
1710 RF no
|
|
|
1711 CS no
|
|
|
1712 MAP yes
|
|
|
1713 DATE Fri Jan 20 23:26:03 2012
|
|
|
1714 NSEQ 63
|
|
|
1715 EFFN 3.318420
|
|
|
1716 CKSUM 1512418120
|
|
|
1717 STATS LOCAL MSV -8.1399 0.71933
|
|
|
1718 STATS LOCAL VITERBI -7.6092 0.71933
|
|
|
1719 STATS LOCAL FORWARD -3.8899 0.71933
|
|
|
1720 HMM A C G T
|
|
|
1721 m->m m->i m->d i->m i->i d->m d->d
|
|
|
1722 COMPO 1.16320 1.31838 1.69977 1.43877
|
|
|
1723 1.38629 1.38629 1.38629 1.38629
|
|
|
1724 0.03692 4.01068 4.01068 1.46634 0.26236 0.00000 *
|
|
|
1725 1 3.02134 2.43366 3.07178 0.20186 1 - -
|
|
|
1726 1.38629 1.38629 1.38629 1.38629
|
|
|
1727 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1728 2 3.43153 0.13040 3.48106 2.82785 2 - -
|
|
|
1729 1.38629 1.38629 1.38629 1.38629
|
|
|
1730 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1731 3 0.14208 3.37890 2.80104 3.28043 3 - -
|
|
|
1732 1.38629 1.38629 1.38629 1.38629
|
|
|
1733 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1734 4 3.43153 0.13040 3.48106 2.82785 4 - -
|
|
|
1735 1.38629 1.38629 1.38629 1.38629
|
|
|
1736 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1737 5 2.94658 3.58637 0.11731 3.49090 5 - -
|
|
|
1738 1.38629 1.38629 1.38629 1.38629
|
|
|
1739 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1740 6 0.14208 3.37890 2.80104 3.28043 6 - -
|
|
|
1741 1.38629 1.38629 1.38629 1.38629
|
|
|
1742 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1743 7 3.43153 0.13040 3.48106 2.82785 7 - -
|
|
|
1744 1.38629 1.38629 1.38629 1.38629
|
|
|
1745 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1746 8 3.43153 0.13040 3.48106 2.82785 8 - -
|
|
|
1747 1.38629 1.38629 1.38629 1.38629
|
|
|
1748 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1749 9 3.08723 2.59426 3.13544 0.17890 9 - -
|
|
|
1750 1.38629 1.38629 1.38629 1.38629
|
|
|
1751 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1752 10 3.43153 0.13040 3.48106 2.82785 10 - -
|
|
|
1753 1.38629 1.38629 1.38629 1.38629
|
|
|
1754 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1755 11 0.14208 3.37890 2.80104 3.28043 11 - -
|
|
|
1756 1.38629 1.38629 1.38629 1.38629
|
|
|
1757 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1758 12 2.73608 2.52824 2.97503 0.21774 12 - -
|
|
|
1759 1.38629 1.38629 1.38629 1.38629
|
|
|
1760 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1761 13 0.14208 3.37890 2.80104 3.28043 13 - -
|
|
|
1762 1.38629 1.38629 1.38629 1.38629
|
|
|
1763 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1764 14 3.02134 2.43366 3.07178 0.20186 14 - -
|
|
|
1765 1.38629 1.38629 1.38629 1.38629
|
|
|
1766 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1767 15 3.43153 0.13040 3.48106 2.82785 15 - -
|
|
|
1768 1.38629 1.38629 1.38629 1.38629
|
|
|
1769 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1770 16 0.14208 3.37890 2.80104 3.28043 16 - -
|
|
|
1771 1.38629 1.38629 1.38629 1.38629
|
|
|
1772 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1773 17 0.14208 3.37890 2.80104 3.28043 17 - -
|
|
|
1774 1.38629 1.38629 1.38629 1.38629
|
|
|
1775 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1776 18 2.94658 3.58637 0.11731 3.49090 18 - -
|
|
|
1777 1.38629 1.38629 1.38629 1.38629
|
|
|
1778 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1779 19 3.08723 2.59426 3.13544 0.17890 19 - -
|
|
|
1780 1.38629 1.38629 1.38629 1.38629
|
|
|
1781 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1782 20 2.94658 3.58637 0.11731 3.49090 20 - -
|
|
|
1783 1.38629 1.38629 1.38629 1.38629
|
|
|
1784 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1785 21 0.14208 3.37890 2.80104 3.28043 21 - -
|
|
|
1786 1.38629 1.38629 1.38629 1.38629
|
|
|
1787 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1788 22 2.94658 3.58637 0.11731 3.49090 22 - -
|
|
|
1789 1.38629 1.38629 1.38629 1.38629
|
|
|
1790 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1791 23 0.14208 3.37890 2.80104 3.28043 23 - -
|
|
|
1792 1.38629 1.38629 1.38629 1.38629
|
|
|
1793 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1794 24 3.08723 2.59426 3.13544 0.17890 24 - -
|
|
|
1795 1.38629 1.38629 1.38629 1.38629
|
|
|
1796 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1797 25 3.08723 2.59426 3.13544 0.17890 25 - -
|
|
|
1798 1.38629 1.38629 1.38629 1.38629
|
|
|
1799 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1800 26 0.14208 3.37890 2.80104 3.28043 26 - -
|
|
|
1801 1.38629 1.38629 1.38629 1.38629
|
|
|
1802 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1803 27 3.43153 0.13040 3.48106 2.82785 27 - -
|
|
|
1804 1.38629 1.38629 1.38629 1.38629
|
|
|
1805 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1806 28 3.43153 0.13040 3.48106 2.82785 28 - -
|
|
|
1807 1.38629 1.38629 1.38629 1.38629
|
|
|
1808 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1809 29 3.43153 0.13040 3.48106 2.82785 29 - -
|
|
|
1810 1.38629 1.38629 1.38629 1.38629
|
|
|
1811 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1812 30 2.94658 3.58637 0.11731 3.49090 30 - -
|
|
|
1813 1.38629 1.38629 1.38629 1.38629
|
|
|
1814 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1815 31 3.43153 0.13040 3.48106 2.82785 31 - -
|
|
|
1816 1.38629 1.38629 1.38629 1.38629
|
|
|
1817 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1818 32 3.08723 2.59426 3.13544 0.17890 32 - -
|
|
|
1819 1.38629 1.38629 1.38629 1.38629
|
|
|
1820 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1821 33 2.94658 3.58637 0.11731 3.49090 33 - -
|
|
|
1822 1.38629 1.38629 1.38629 1.38629
|
|
|
1823 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1824 34 0.14208 3.37890 2.80104 3.28043 34 - -
|
|
|
1825 1.38629 1.38629 1.38629 1.38629
|
|
|
1826 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1827 35 0.14208 3.37890 2.80104 3.28043 35 - -
|
|
|
1828 1.38629 1.38629 1.38629 1.38629
|
|
|
1829 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1830 36 3.43153 0.13040 3.48106 2.82785 36 - -
|
|
|
1831 1.38629 1.38629 1.38629 1.38629
|
|
|
1832 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1833 37 3.08723 2.59426 3.13544 0.17890 37 - -
|
|
|
1834 1.38629 1.38629 1.38629 1.38629
|
|
|
1835 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1836 38 3.08723 2.59426 3.13544 0.17890 38 - -
|
|
|
1837 1.38629 1.38629 1.38629 1.38629
|
|
|
1838 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1839 39 0.14208 3.37890 2.80104 3.28043 39 - -
|
|
|
1840 1.38629 1.38629 1.38629 1.38629
|
|
|
1841 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1842 40 0.14208 3.37890 2.80104 3.28043 40 - -
|
|
|
1843 1.38629 1.38629 1.38629 1.38629
|
|
|
1844 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1845 41 2.89044 3.47872 0.12838 3.37899 41 - -
|
|
|
1846 1.38629 1.38629 1.38629 1.38629
|
|
|
1847 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1848 42 3.43153 0.13040 3.48106 2.82785 42 - -
|
|
|
1849 1.38629 1.38629 1.38629 1.38629
|
|
|
1850 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1851 43 0.14208 3.37890 2.80104 3.28043 43 - -
|
|
|
1852 1.38629 1.38629 1.38629 1.38629
|
|
|
1853 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1854 44 3.08723 2.59426 3.13544 0.17890 44 - -
|
|
|
1855 1.38629 1.38629 1.38629 1.38629
|
|
|
1856 0.03692 4.01068 4.01068 1.46634 0.26236 1.09861 0.40547
|
|
|
1857 45 0.14208 3.37890 2.80104 3.28043 45 - -
|
|
|
1858 1.38629 1.38629 1.38629 1.38629
|
|
|
1859 0.01863 3.99239 * 1.46634 0.26236 0.00000 *
|
|
|
1860 //
|
|
|
1861 HMMER3/b [3.0 | March 2010]
|
|
|
1862 NAME 4_LSU_Amoebozoa_4_LSU_start_oned_long
|
|
|
1863 LENG 45
|
|
|
1864 ALPH DNA
|
|
|
1865 RF no
|
|
|
1866 CS no
|
|
|
1867 MAP yes
|
|
|
1868 DATE Fri Jan 20 23:26:08 2012
|
|
|
1869 NSEQ 24
|
|
|
1870 EFFN 3.301758
|
|
|
1871 CKSUM 3316240930
|
|
|
1872 STATS LOCAL MSV -8.1199 0.71932
|
|
|
1873 STATS LOCAL VITERBI -7.7229 0.71932
|
|
|
1874 STATS LOCAL FORWARD -3.9195 0.71932
|
|
|
1875 HMM A C G T
|
|
|
1876 m->m m->i m->d i->m i->i d->m d->d
|
|
|
1877 COMPO 1.06159 1.38916 1.79405 1.43329
|
|
|
1878 1.38629 1.38629 1.38629 1.38629
|
|
|
1879 0.03703 4.00765 4.00765 1.46634 0.26236 0.00000 *
|
|
|
1880 1 3.08183 2.59083 3.13024 0.17977 1 - -
|
|
|
1881 1.38629 1.38629 1.38629 1.38629
|
|
|
1882 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1883 2 0.14279 3.37354 2.79756 3.27457 2 - -
|
|
|
1884 1.38629 1.38629 1.38629 1.38629
|
|
|
1885 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1886 3 3.08183 2.59083 3.13024 0.17977 3 - -
|
|
|
1887 1.38629 1.38629 1.38629 1.38629
|
|
|
1888 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1889 4 3.42536 0.13114 3.47515 2.82335 4 - -
|
|
|
1890 1.38629 1.38629 1.38629 1.38629
|
|
|
1891 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1892 5 0.14279 3.37354 2.79756 3.27457 5 - -
|
|
|
1893 1.38629 1.38629 1.38629 1.38629
|
|
|
1894 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1895 6 0.14279 3.37354 2.79756 3.27457 6 - -
|
|
|
1896 1.38629 1.38629 1.38629 1.38629
|
|
|
1897 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1898 7 3.42536 0.13114 3.47515 2.82335 7 - -
|
|
|
1899 1.38629 1.38629 1.38629 1.38629
|
|
|
1900 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1901 8 3.42536 0.13114 3.47515 2.82335 8 - -
|
|
|
1902 1.38629 1.38629 1.38629 1.38629
|
|
|
1903 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1904 9 3.08183 2.59083 3.13024 0.17977 9 - -
|
|
|
1905 1.38629 1.38629 1.38629 1.38629
|
|
|
1906 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1907 10 3.42536 0.13114 3.47515 2.82335 10 - -
|
|
|
1908 1.38629 1.38629 1.38629 1.38629
|
|
|
1909 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1910 11 0.14279 3.37354 2.79756 3.27457 11 - -
|
|
|
1911 1.38629 1.38629 1.38629 1.38629
|
|
|
1912 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1913 12 0.14279 3.37354 2.79756 3.27457 12 - -
|
|
|
1914 1.38629 1.38629 1.38629 1.38629
|
|
|
1915 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1916 13 0.14279 3.37354 2.79756 3.27457 13 - -
|
|
|
1917 1.38629 1.38629 1.38629 1.38629
|
|
|
1918 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1919 14 3.08183 2.59083 3.13024 0.17977 14 - -
|
|
|
1920 1.38629 1.38629 1.38629 1.38629
|
|
|
1921 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1922 15 3.42536 0.13114 3.47515 2.82335 15 - -
|
|
|
1923 1.38629 1.38629 1.38629 1.38629
|
|
|
1924 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1925 16 0.14279 3.37354 2.79756 3.27457 16 - -
|
|
|
1926 1.38629 1.38629 1.38629 1.38629
|
|
|
1927 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1928 17 0.14279 3.37354 2.79756 3.27457 17 - -
|
|
|
1929 1.38629 1.38629 1.38629 1.38629
|
|
|
1930 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1931 18 2.94283 3.58093 0.11791 3.48489 18 - -
|
|
|
1932 1.38629 1.38629 1.38629 1.38629
|
|
|
1933 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1934 19 3.08183 2.59083 3.13024 0.17977 19 - -
|
|
|
1935 1.38629 1.38629 1.38629 1.38629
|
|
|
1936 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1937 20 2.94283 3.58093 0.11791 3.48489 20 - -
|
|
|
1938 1.38629 1.38629 1.38629 1.38629
|
|
|
1939 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1940 21 0.14279 3.37354 2.79756 3.27457 21 - -
|
|
|
1941 1.38629 1.38629 1.38629 1.38629
|
|
|
1942 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1943 22 2.94283 3.58093 0.11791 3.48489 22 - -
|
|
|
1944 1.38629 1.38629 1.38629 1.38629
|
|
|
1945 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1946 23 0.14279 3.37354 2.79756 3.27457 23 - -
|
|
|
1947 1.38629 1.38629 1.38629 1.38629
|
|
|
1948 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1949 24 3.08183 2.59083 3.13024 0.17977 24 - -
|
|
|
1950 1.38629 1.38629 1.38629 1.38629
|
|
|
1951 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1952 25 3.08183 2.59083 3.13024 0.17977 25 - -
|
|
|
1953 1.38629 1.38629 1.38629 1.38629
|
|
|
1954 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1955 26 0.14279 3.37354 2.79756 3.27457 26 - -
|
|
|
1956 1.38629 1.38629 1.38629 1.38629
|
|
|
1957 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1958 27 3.42536 0.13114 3.47515 2.82335 27 - -
|
|
|
1959 1.38629 1.38629 1.38629 1.38629
|
|
|
1960 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1961 28 3.42536 0.13114 3.47515 2.82335 28 - -
|
|
|
1962 1.38629 1.38629 1.38629 1.38629
|
|
|
1963 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1964 29 3.42536 0.13114 3.47515 2.82335 29 - -
|
|
|
1965 1.38629 1.38629 1.38629 1.38629
|
|
|
1966 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1967 30 2.94283 3.58093 0.11791 3.48489 30 - -
|
|
|
1968 1.38629 1.38629 1.38629 1.38629
|
|
|
1969 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1970 31 3.42536 0.13114 3.47515 2.82335 31 - -
|
|
|
1971 1.38629 1.38629 1.38629 1.38629
|
|
|
1972 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1973 32 3.08183 2.59083 3.13024 0.17977 32 - -
|
|
|
1974 1.38629 1.38629 1.38629 1.38629
|
|
|
1975 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1976 33 2.94283 3.58093 0.11791 3.48489 33 - -
|
|
|
1977 1.38629 1.38629 1.38629 1.38629
|
|
|
1978 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1979 34 0.14279 3.37354 2.79756 3.27457 34 - -
|
|
|
1980 1.38629 1.38629 1.38629 1.38629
|
|
|
1981 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1982 35 0.14279 3.37354 2.79756 3.27457 35 - -
|
|
|
1983 1.38629 1.38629 1.38629 1.38629
|
|
|
1984 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1985 36 3.42536 0.13114 3.47515 2.82335 36 - -
|
|
|
1986 1.38629 1.38629 1.38629 1.38629
|
|
|
1987 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1988 37 3.08183 2.59083 3.13024 0.17977 37 - -
|
|
|
1989 1.38629 1.38629 1.38629 1.38629
|
|
|
1990 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1991 38 3.08183 2.59083 3.13024 0.17977 38 - -
|
|
|
1992 1.38629 1.38629 1.38629 1.38629
|
|
|
1993 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1994 39 0.14279 3.37354 2.79756 3.27457 39 - -
|
|
|
1995 1.38629 1.38629 1.38629 1.38629
|
|
|
1996 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
1997 40 0.14279 3.37354 2.79756 3.27457 40 - -
|
|
|
1998 1.38629 1.38629 1.38629 1.38629
|
|
|
1999 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2000 41 2.94283 3.58093 0.11791 3.48489 41 - -
|
|
|
2001 1.38629 1.38629 1.38629 1.38629
|
|
|
2002 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2003 42 3.42536 0.13114 3.47515 2.82335 42 - -
|
|
|
2004 1.38629 1.38629 1.38629 1.38629
|
|
|
2005 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2006 43 0.14279 3.37354 2.79756 3.27457 43 - -
|
|
|
2007 1.38629 1.38629 1.38629 1.38629
|
|
|
2008 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2009 44 3.08183 2.59083 3.13024 0.17977 44 - -
|
|
|
2010 1.38629 1.38629 1.38629 1.38629
|
|
|
2011 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2012 45 0.14279 3.37354 2.79756 3.27457 45 - -
|
|
|
2013 1.38629 1.38629 1.38629 1.38629
|
|
|
2014 0.01869 3.98931 * 1.46634 0.26236 0.00000 *
|
|
|
2015 //
|
|
|
2016 HMMER3/b [3.0 | March 2010]
|
|
|
2017 NAME 4_LSU_Amoebozoa_4_LSU_start_threea_long
|
|
|
2018 LENG 45
|
|
|
2019 ALPH DNA
|
|
|
2020 RF no
|
|
|
2021 CS no
|
|
|
2022 MAP yes
|
|
|
2023 DATE Fri Jan 20 23:27:32 2012
|
|
|
2024 NSEQ 91
|
|
|
2025 EFFN 3.357513
|
|
|
2026 CKSUM 3218427169
|
|
|
2027 STATS LOCAL MSV -8.0690 0.71933
|
|
|
2028 STATS LOCAL VITERBI -7.5442 0.71933
|
|
|
2029 STATS LOCAL FORWARD -4.3497 0.71933
|
|
|
2030 HMM A C G T
|
|
|
2031 m->m m->i m->d i->m i->i d->m d->d
|
|
|
2032 COMPO 1.34181 1.24914 1.80713 1.24565
|
|
|
2033 1.38629 1.38629 1.38629 1.38629
|
|
|
2034 0.03665 4.01774 4.01774 1.46634 0.26236 0.00000 *
|
|
|
2035 1 0.14044 3.39135 2.80912 3.29407 1 - -
|
|
|
2036 1.38629 1.38629 1.38629 1.38629
|
|
|
2037 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2038 2 3.09981 2.60227 3.14754 0.17688 2 - -
|
|
|
2039 1.38629 1.38629 1.38629 1.38629
|
|
|
2040 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2041 3 3.09981 2.60227 3.14754 0.17688 3 - -
|
|
|
2042 1.38629 1.38629 1.38629 1.38629
|
|
|
2043 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2044 4 3.44588 0.12869 3.49480 2.83829 4 - -
|
|
|
2045 1.38629 1.38629 1.38629 1.38629
|
|
|
2046 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2047 5 3.44588 0.12869 3.49480 2.83829 5 - -
|
|
|
2048 1.38629 1.38629 1.38629 1.38629
|
|
|
2049 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2050 6 2.95525 3.59899 0.11594 3.50483 6 - -
|
|
|
2051 1.38629 1.38629 1.38629 1.38629
|
|
|
2052 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2053 7 3.44588 0.12869 3.49480 2.83829 7 - -
|
|
|
2054 1.38629 1.38629 1.38629 1.38629
|
|
|
2055 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2056 8 3.44588 0.12869 3.49480 2.83829 8 - -
|
|
|
2057 1.38629 1.38629 1.38629 1.38629
|
|
|
2058 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2059 9 3.09981 2.60227 3.14754 0.17688 9 - -
|
|
|
2060 1.38629 1.38629 1.38629 1.38629
|
|
|
2061 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2062 10 3.44588 0.12869 3.49480 2.83829 10 - -
|
|
|
2063 1.38629 1.38629 1.38629 1.38629
|
|
|
2064 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2065 11 0.14044 3.39135 2.80912 3.29407 11 - -
|
|
|
2066 1.38629 1.38629 1.38629 1.38629
|
|
|
2067 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2068 12 3.44588 0.12869 3.49480 2.83829 12 - -
|
|
|
2069 1.38629 1.38629 1.38629 1.38629
|
|
|
2070 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2071 13 3.44588 0.12869 3.49480 2.83829 13 - -
|
|
|
2072 1.38629 1.38629 1.38629 1.38629
|
|
|
2073 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2074 14 3.09981 2.60227 3.14754 0.17688 14 - -
|
|
|
2075 1.38629 1.38629 1.38629 1.38629
|
|
|
2076 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2077 15 3.09981 2.60227 3.14754 0.17688 15 - -
|
|
|
2078 1.38629 1.38629 1.38629 1.38629
|
|
|
2079 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2080 16 2.90007 2.52341 2.72811 0.22383 16 - -
|
|
|
2081 1.38629 1.38629 1.38629 1.38629
|
|
|
2082 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2083 17 2.95525 3.59899 0.11594 3.50483 17 - -
|
|
|
2084 1.38629 1.38629 1.38629 1.38629
|
|
|
2085 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2086 18 3.09981 2.60227 3.14754 0.17688 18 - -
|
|
|
2087 1.38629 1.38629 1.38629 1.38629
|
|
|
2088 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2089 19 0.14044 3.39135 2.80912 3.29407 19 - -
|
|
|
2090 1.38629 1.38629 1.38629 1.38629
|
|
|
2091 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2092 20 0.14044 3.39135 2.80912 3.29407 20 - -
|
|
|
2093 1.38629 1.38629 1.38629 1.38629
|
|
|
2094 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2095 21 2.95525 3.59899 0.11594 3.50483 21 - -
|
|
|
2096 1.38629 1.38629 1.38629 1.38629
|
|
|
2097 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2098 22 0.14044 3.39135 2.80912 3.29407 22 - -
|
|
|
2099 1.38629 1.38629 1.38629 1.38629
|
|
|
2100 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2101 23 3.09981 2.60227 3.14754 0.17688 23 - -
|
|
|
2102 1.38629 1.38629 1.38629 1.38629
|
|
|
2103 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2104 24 3.09981 2.60227 3.14754 0.17688 24 - -
|
|
|
2105 1.38629 1.38629 1.38629 1.38629
|
|
|
2106 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2107 25 0.14044 3.39135 2.80912 3.29407 25 - -
|
|
|
2108 1.38629 1.38629 1.38629 1.38629
|
|
|
2109 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2110 26 3.44588 0.12869 3.49480 2.83829 26 - -
|
|
|
2111 1.38629 1.38629 1.38629 1.38629
|
|
|
2112 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2113 27 3.44588 0.12869 3.49480 2.83829 27 - -
|
|
|
2114 1.38629 1.38629 1.38629 1.38629
|
|
|
2115 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2116 28 3.44588 0.12869 3.49480 2.83829 28 - -
|
|
|
2117 1.38629 1.38629 1.38629 1.38629
|
|
|
2118 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2119 29 2.95525 3.59899 0.11594 3.50483 29 - -
|
|
|
2120 1.38629 1.38629 1.38629 1.38629
|
|
|
2121 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2122 30 3.44588 0.12869 3.49480 2.83829 30 - -
|
|
|
2123 1.38629 1.38629 1.38629 1.38629
|
|
|
2124 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2125 31 3.09981 2.60227 3.14754 0.17688 31 - -
|
|
|
2126 1.38629 1.38629 1.38629 1.38629
|
|
|
2127 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2128 32 2.95525 3.59899 0.11594 3.50483 32 - -
|
|
|
2129 1.38629 1.38629 1.38629 1.38629
|
|
|
2130 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2131 33 0.14044 3.39135 2.80912 3.29407 33 - -
|
|
|
2132 1.38629 1.38629 1.38629 1.38629
|
|
|
2133 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2134 34 0.14044 3.39135 2.80912 3.29407 34 - -
|
|
|
2135 1.38629 1.38629 1.38629 1.38629
|
|
|
2136 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2137 35 3.44588 0.12869 3.49480 2.83829 35 - -
|
|
|
2138 1.38629 1.38629 1.38629 1.38629
|
|
|
2139 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2140 36 3.09981 2.60227 3.14754 0.17688 36 - -
|
|
|
2141 1.38629 1.38629 1.38629 1.38629
|
|
|
2142 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2143 37 3.09981 2.60227 3.14754 0.17688 37 - -
|
|
|
2144 1.38629 1.38629 1.38629 1.38629
|
|
|
2145 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2146 38 0.14044 3.39135 2.80912 3.29407 38 - -
|
|
|
2147 1.38629 1.38629 1.38629 1.38629
|
|
|
2148 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2149 39 0.14044 3.39135 2.80912 3.29407 39 - -
|
|
|
2150 1.38629 1.38629 1.38629 1.38629
|
|
|
2151 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2152 40 2.95525 3.59899 0.11594 3.50483 40 - -
|
|
|
2153 1.38629 1.38629 1.38629 1.38629
|
|
|
2154 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2155 41 3.44588 0.12869 3.49480 2.83829 41 - -
|
|
|
2156 1.38629 1.38629 1.38629 1.38629
|
|
|
2157 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2158 42 0.14044 3.39135 2.80912 3.29407 42 - -
|
|
|
2159 1.38629 1.38629 1.38629 1.38629
|
|
|
2160 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2161 43 3.09981 2.60227 3.14754 0.17688 43 - -
|
|
|
2162 1.38629 1.38629 1.38629 1.38629
|
|
|
2163 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2164 44 0.14044 3.39135 2.80912 3.29407 44 - -
|
|
|
2165 1.38629 1.38629 1.38629 1.38629
|
|
|
2166 0.03665 4.01774 4.01774 1.46634 0.26236 1.09861 0.40547
|
|
|
2167 45 3.09981 2.60227 3.14754 0.17688 45 - -
|
|
|
2168 1.38629 1.38629 1.38629 1.38629
|
|
|
2169 0.01849 3.99958 * 1.46634 0.26236 0.00000 *
|
|
|
2170 //
|
|
|
2171 HMMER3/b [3.0 | March 2010]
|
|
|
2172 NAME 4_LSU_Amoebozoa_4_LSU_start_threeb_long
|
|
|
2173 LENG 45
|
|
|
2174 ALPH DNA
|
|
|
2175 RF no
|
|
|
2176 CS no
|
|
|
2177 MAP yes
|
|
|
2178 DATE Fri Jan 20 23:27:39 2012
|
|
|
2179 NSEQ 37
|
|
|
2180 EFFN 3.355835
|
|
|
2181 CKSUM 748456799
|
|
|
2182 STATS LOCAL MSV -8.0028 0.71934
|
|
|
2183 STATS LOCAL VITERBI -7.6102 0.71934
|
|
|
2184 STATS LOCAL FORWARD -4.0065 0.71934
|
|
|
2185 HMM A C G T
|
|
|
2186 m->m m->i m->d i->m i->i d->m d->d
|
|
|
2187 COMPO 1.21748 1.37885 1.69924 1.31180
|
|
|
2188 1.38629 1.38629 1.38629 1.38629
|
|
|
2189 0.03666 4.01743 4.01743 1.46634 0.26236 0.00000 *
|
|
|
2190 1 0.14051 3.39082 2.80878 3.29348 1 - -
|
|
|
2191 1.38629 1.38629 1.38629 1.38629
|
|
|
2192 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2193 2 3.09928 2.60192 3.14702 0.17697 2 - -
|
|
|
2194 1.38629 1.38629 1.38629 1.38629
|
|
|
2195 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2196 3 2.95488 3.59846 0.11600 3.50424 3 - -
|
|
|
2197 1.38629 1.38629 1.38629 1.38629
|
|
|
2198 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2199 4 3.09928 2.60192 3.14702 0.17697 4 - -
|
|
|
2200 1.38629 1.38629 1.38629 1.38629
|
|
|
2201 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2202 5 3.09928 2.60192 3.14702 0.17697 5 - -
|
|
|
2203 1.38629 1.38629 1.38629 1.38629
|
|
|
2204 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2205 6 2.95488 3.59846 0.11600 3.50424 6 - -
|
|
|
2206 1.38629 1.38629 1.38629 1.38629
|
|
|
2207 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2208 7 3.44527 0.12877 3.49421 2.83784 7 - -
|
|
|
2209 1.38629 1.38629 1.38629 1.38629
|
|
|
2210 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2211 8 3.44527 0.12877 3.49421 2.83784 8 - -
|
|
|
2212 1.38629 1.38629 1.38629 1.38629
|
|
|
2213 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2214 9 3.09928 2.60192 3.14702 0.17697 9 - -
|
|
|
2215 1.38629 1.38629 1.38629 1.38629
|
|
|
2216 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2217 10 3.44527 0.12877 3.49421 2.83784 10 - -
|
|
|
2218 1.38629 1.38629 1.38629 1.38629
|
|
|
2219 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2220 11 0.14051 3.39082 2.80878 3.29348 11 - -
|
|
|
2221 1.38629 1.38629 1.38629 1.38629
|
|
|
2222 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2223 12 3.09928 2.60192 3.14702 0.17697 12 - -
|
|
|
2224 1.38629 1.38629 1.38629 1.38629
|
|
|
2225 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2226 13 3.44527 0.12877 3.49421 2.83784 13 - -
|
|
|
2227 1.38629 1.38629 1.38629 1.38629
|
|
|
2228 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2229 14 2.83510 2.01766 2.89263 0.28384 14 - -
|
|
|
2230 1.38629 1.38629 1.38629 1.38629
|
|
|
2231 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2232 15 0.14051 3.39082 2.80878 3.29348 15 - -
|
|
|
2233 1.38629 1.38629 1.38629 1.38629
|
|
|
2234 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2235 16 0.14051 3.39082 2.80878 3.29348 16 - -
|
|
|
2236 1.38629 1.38629 1.38629 1.38629
|
|
|
2237 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2238 17 2.95488 3.59846 0.11600 3.50424 17 - -
|
|
|
2239 1.38629 1.38629 1.38629 1.38629
|
|
|
2240 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2241 18 3.09928 2.60192 3.14702 0.17697 18 - -
|
|
|
2242 1.38629 1.38629 1.38629 1.38629
|
|
|
2243 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2244 19 0.14051 3.39082 2.80878 3.29348 19 - -
|
|
|
2245 1.38629 1.38629 1.38629 1.38629
|
|
|
2246 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2247 20 0.14051 3.39082 2.80878 3.29348 20 - -
|
|
|
2248 1.38629 1.38629 1.38629 1.38629
|
|
|
2249 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2250 21 2.95488 3.59846 0.11600 3.50424 21 - -
|
|
|
2251 1.38629 1.38629 1.38629 1.38629
|
|
|
2252 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2253 22 0.14051 3.39082 2.80878 3.29348 22 - -
|
|
|
2254 1.38629 1.38629 1.38629 1.38629
|
|
|
2255 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2256 23 3.44527 0.12877 3.49421 2.83784 23 - -
|
|
|
2257 1.38629 1.38629 1.38629 1.38629
|
|
|
2258 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2259 24 3.09928 2.60192 3.14702 0.17697 24 - -
|
|
|
2260 1.38629 1.38629 1.38629 1.38629
|
|
|
2261 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2262 25 0.14051 3.39082 2.80878 3.29348 25 - -
|
|
|
2263 1.38629 1.38629 1.38629 1.38629
|
|
|
2264 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2265 26 3.44527 0.12877 3.49421 2.83784 26 - -
|
|
|
2266 1.38629 1.38629 1.38629 1.38629
|
|
|
2267 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2268 27 3.44527 0.12877 3.49421 2.83784 27 - -
|
|
|
2269 1.38629 1.38629 1.38629 1.38629
|
|
|
2270 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2271 28 3.44527 0.12877 3.49421 2.83784 28 - -
|
|
|
2272 1.38629 1.38629 1.38629 1.38629
|
|
|
2273 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2274 29 2.95488 3.59846 0.11600 3.50424 29 - -
|
|
|
2275 1.38629 1.38629 1.38629 1.38629
|
|
|
2276 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2277 30 3.44527 0.12877 3.49421 2.83784 30 - -
|
|
|
2278 1.38629 1.38629 1.38629 1.38629
|
|
|
2279 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2280 31 3.09928 2.60192 3.14702 0.17697 31 - -
|
|
|
2281 1.38629 1.38629 1.38629 1.38629
|
|
|
2282 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2283 32 2.95488 3.59846 0.11600 3.50424 32 - -
|
|
|
2284 1.38629 1.38629 1.38629 1.38629
|
|
|
2285 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2286 33 0.14051 3.39082 2.80878 3.29348 33 - -
|
|
|
2287 1.38629 1.38629 1.38629 1.38629
|
|
|
2288 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2289 34 0.14051 3.39082 2.80878 3.29348 34 - -
|
|
|
2290 1.38629 1.38629 1.38629 1.38629
|
|
|
2291 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2292 35 3.44527 0.12877 3.49421 2.83784 35 - -
|
|
|
2293 1.38629 1.38629 1.38629 1.38629
|
|
|
2294 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2295 36 3.09928 2.60192 3.14702 0.17697 36 - -
|
|
|
2296 1.38629 1.38629 1.38629 1.38629
|
|
|
2297 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2298 37 3.09928 2.60192 3.14702 0.17697 37 - -
|
|
|
2299 1.38629 1.38629 1.38629 1.38629
|
|
|
2300 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2301 38 0.14051 3.39082 2.80878 3.29348 38 - -
|
|
|
2302 1.38629 1.38629 1.38629 1.38629
|
|
|
2303 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2304 39 0.14051 3.39082 2.80878 3.29348 39 - -
|
|
|
2305 1.38629 1.38629 1.38629 1.38629
|
|
|
2306 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2307 40 2.95488 3.59846 0.11600 3.50424 40 - -
|
|
|
2308 1.38629 1.38629 1.38629 1.38629
|
|
|
2309 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2310 41 3.44527 0.12877 3.49421 2.83784 41 - -
|
|
|
2311 1.38629 1.38629 1.38629 1.38629
|
|
|
2312 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2313 42 0.14051 3.39082 2.80878 3.29348 42 - -
|
|
|
2314 1.38629 1.38629 1.38629 1.38629
|
|
|
2315 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2316 43 3.09928 2.60192 3.14702 0.17697 43 - -
|
|
|
2317 1.38629 1.38629 1.38629 1.38629
|
|
|
2318 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2319 44 0.14051 3.39082 2.80878 3.29348 44 - -
|
|
|
2320 1.38629 1.38629 1.38629 1.38629
|
|
|
2321 0.03666 4.01743 4.01743 1.46634 0.26236 1.09861 0.40547
|
|
|
2322 45 3.09928 2.60192 3.14702 0.17697 45 - -
|
|
|
2323 1.38629 1.38629 1.38629 1.38629
|
|
|
2324 0.01850 3.99927 * 1.46634 0.26236 0.00000 *
|
|
|
2325 //
|
|
|
2326 HMMER3/b [3.0 | March 2010]
|
|
|
2327 NAME 4_LSU_Amoebozoa_4_LSU_start_threec_long
|
|
|
2328 LENG 45
|
|
|
2329 ALPH DNA
|
|
|
2330 RF no
|
|
|
2331 CS no
|
|
|
2332 MAP yes
|
|
|
2333 DATE Fri Jan 20 23:27:48 2012
|
|
|
2334 NSEQ 24
|
|
|
2335 EFFN 3.301758
|
|
|
2336 CKSUM 2052849582
|
|
|
2337 STATS LOCAL MSV -8.0328 0.71932
|
|
|
2338 STATS LOCAL VITERBI -7.7296 0.71932
|
|
|
2339 STATS LOCAL FORWARD -4.1535 0.71932
|
|
|
2340 HMM A C G T
|
|
|
2341 m->m m->i m->d i->m i->i d->m d->d
|
|
|
2342 COMPO 1.34051 1.31747 1.61312 1.30486
|
|
|
2343 1.38629 1.38629 1.38629 1.38629
|
|
|
2344 0.03703 4.00765 4.00765 1.46634 0.26236 0.00000 *
|
|
|
2345 1 0.14279 3.37354 2.79756 3.27457 1 - -
|
|
|
2346 1.38629 1.38629 1.38629 1.38629
|
|
|
2347 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2348 2 3.08183 2.59083 3.13024 0.17977 2 - -
|
|
|
2349 1.38629 1.38629 1.38629 1.38629
|
|
|
2350 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2351 3 2.94283 3.58093 0.11791 3.48489 3 - -
|
|
|
2352 1.38629 1.38629 1.38629 1.38629
|
|
|
2353 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2354 4 3.08183 2.59083 3.13024 0.17977 4 - -
|
|
|
2355 1.38629 1.38629 1.38629 1.38629
|
|
|
2356 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2357 5 3.08183 2.59083 3.13024 0.17977 5 - -
|
|
|
2358 1.38629 1.38629 1.38629 1.38629
|
|
|
2359 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2360 6 2.94283 3.58093 0.11791 3.48489 6 - -
|
|
|
2361 1.38629 1.38629 1.38629 1.38629
|
|
|
2362 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2363 7 3.42536 0.13114 3.47515 2.82335 7 - -
|
|
|
2364 1.38629 1.38629 1.38629 1.38629
|
|
|
2365 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2366 8 3.42536 0.13114 3.47515 2.82335 8 - -
|
|
|
2367 1.38629 1.38629 1.38629 1.38629
|
|
|
2368 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2369 9 3.08183 2.59083 3.13024 0.17977 9 - -
|
|
|
2370 1.38629 1.38629 1.38629 1.38629
|
|
|
2371 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2372 10 3.42536 0.13114 3.47515 2.82335 10 - -
|
|
|
2373 1.38629 1.38629 1.38629 1.38629
|
|
|
2374 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2375 11 0.14279 3.37354 2.79756 3.27457 11 - -
|
|
|
2376 1.38629 1.38629 1.38629 1.38629
|
|
|
2377 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2378 12 3.42536 0.13114 3.47515 2.82335 12 - -
|
|
|
2379 1.38629 1.38629 1.38629 1.38629
|
|
|
2380 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2381 13 3.42536 0.13114 3.47515 2.82335 13 - -
|
|
|
2382 1.38629 1.38629 1.38629 1.38629
|
|
|
2383 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2384 14 3.08183 2.59083 3.13024 0.17977 14 - -
|
|
|
2385 1.38629 1.38629 1.38629 1.38629
|
|
|
2386 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2387 15 3.08183 2.59083 3.13024 0.17977 15 - -
|
|
|
2388 1.38629 1.38629 1.38629 1.38629
|
|
|
2389 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2390 16 2.94283 3.58093 0.11791 3.48489 16 - -
|
|
|
2391 1.38629 1.38629 1.38629 1.38629
|
|
|
2392 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2393 17 2.94283 3.58093 0.11791 3.48489 17 - -
|
|
|
2394 1.38629 1.38629 1.38629 1.38629
|
|
|
2395 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2396 18 3.08183 2.59083 3.13024 0.17977 18 - -
|
|
|
2397 1.38629 1.38629 1.38629 1.38629
|
|
|
2398 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2399 19 0.14279 3.37354 2.79756 3.27457 19 - -
|
|
|
2400 1.38629 1.38629 1.38629 1.38629
|
|
|
2401 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2402 20 0.14279 3.37354 2.79756 3.27457 20 - -
|
|
|
2403 1.38629 1.38629 1.38629 1.38629
|
|
|
2404 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2405 21 2.94283 3.58093 0.11791 3.48489 21 - -
|
|
|
2406 1.38629 1.38629 1.38629 1.38629
|
|
|
2407 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2408 22 0.14279 3.37354 2.79756 3.27457 22 - -
|
|
|
2409 1.38629 1.38629 1.38629 1.38629
|
|
|
2410 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2411 23 3.42536 0.13114 3.47515 2.82335 23 - -
|
|
|
2412 1.38629 1.38629 1.38629 1.38629
|
|
|
2413 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2414 24 3.08183 2.59083 3.13024 0.17977 24 - -
|
|
|
2415 1.38629 1.38629 1.38629 1.38629
|
|
|
2416 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2417 25 0.14279 3.37354 2.79756 3.27457 25 - -
|
|
|
2418 1.38629 1.38629 1.38629 1.38629
|
|
|
2419 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2420 26 3.42536 0.13114 3.47515 2.82335 26 - -
|
|
|
2421 1.38629 1.38629 1.38629 1.38629
|
|
|
2422 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2423 27 3.42536 0.13114 3.47515 2.82335 27 - -
|
|
|
2424 1.38629 1.38629 1.38629 1.38629
|
|
|
2425 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2426 28 3.42536 0.13114 3.47515 2.82335 28 - -
|
|
|
2427 1.38629 1.38629 1.38629 1.38629
|
|
|
2428 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2429 29 2.94283 3.58093 0.11791 3.48489 29 - -
|
|
|
2430 1.38629 1.38629 1.38629 1.38629
|
|
|
2431 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2432 30 3.42536 0.13114 3.47515 2.82335 30 - -
|
|
|
2433 1.38629 1.38629 1.38629 1.38629
|
|
|
2434 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2435 31 3.08183 2.59083 3.13024 0.17977 31 - -
|
|
|
2436 1.38629 1.38629 1.38629 1.38629
|
|
|
2437 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2438 32 2.94283 3.58093 0.11791 3.48489 32 - -
|
|
|
2439 1.38629 1.38629 1.38629 1.38629
|
|
|
2440 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2441 33 0.14279 3.37354 2.79756 3.27457 33 - -
|
|
|
2442 1.38629 1.38629 1.38629 1.38629
|
|
|
2443 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2444 34 0.14279 3.37354 2.79756 3.27457 34 - -
|
|
|
2445 1.38629 1.38629 1.38629 1.38629
|
|
|
2446 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2447 35 3.42536 0.13114 3.47515 2.82335 35 - -
|
|
|
2448 1.38629 1.38629 1.38629 1.38629
|
|
|
2449 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2450 36 3.08183 2.59083 3.13024 0.17977 36 - -
|
|
|
2451 1.38629 1.38629 1.38629 1.38629
|
|
|
2452 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2453 37 3.08183 2.59083 3.13024 0.17977 37 - -
|
|
|
2454 1.38629 1.38629 1.38629 1.38629
|
|
|
2455 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2456 38 0.14279 3.37354 2.79756 3.27457 38 - -
|
|
|
2457 1.38629 1.38629 1.38629 1.38629
|
|
|
2458 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2459 39 0.14279 3.37354 2.79756 3.27457 39 - -
|
|
|
2460 1.38629 1.38629 1.38629 1.38629
|
|
|
2461 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2462 40 2.94283 3.58093 0.11791 3.48489 40 - -
|
|
|
2463 1.38629 1.38629 1.38629 1.38629
|
|
|
2464 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2465 41 3.42536 0.13114 3.47515 2.82335 41 - -
|
|
|
2466 1.38629 1.38629 1.38629 1.38629
|
|
|
2467 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2468 42 0.14279 3.37354 2.79756 3.27457 42 - -
|
|
|
2469 1.38629 1.38629 1.38629 1.38629
|
|
|
2470 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2471 43 3.08183 2.59083 3.13024 0.17977 43 - -
|
|
|
2472 1.38629 1.38629 1.38629 1.38629
|
|
|
2473 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2474 44 0.14279 3.37354 2.79756 3.27457 44 - -
|
|
|
2475 1.38629 1.38629 1.38629 1.38629
|
|
|
2476 0.03703 4.00765 4.00765 1.46634 0.26236 1.09861 0.40547
|
|
|
2477 45 3.08183 2.59083 3.13024 0.17977 45 - -
|
|
|
2478 1.38629 1.38629 1.38629 1.38629
|
|
|
2479 0.01869 3.98931 * 1.46634 0.26236 0.00000 *
|
|
|
2480 //
|
|
|
2481 HMMER3/b [3.0 | March 2010]
|
|
|
2482 NAME 4_LSU_Amoebozoa_4_LSU_start_two_long
|
|
|
2483 LENG 45
|
|
|
2484 ALPH DNA
|
|
|
2485 RF no
|
|
|
2486 CS no
|
|
|
2487 MAP yes
|
|
|
2488 DATE Fri Jan 20 23:27:18 2012
|
|
|
2489 NSEQ 90
|
|
|
2490 EFFN 3.589783
|
|
|
2491 CKSUM 608676318
|
|
|
2492 STATS LOCAL MSV -7.8555 0.71932
|
|
|
2493 STATS LOCAL VITERBI -7.7531 0.71932
|
|
|
2494 STATS LOCAL FORWARD -4.2533 0.71932
|
|
|
2495 HMM A C G T
|
|
|
2496 m->m m->i m->d i->m i->i d->m d->d
|
|
|
2497 COMPO 1.23957 1.30603 1.77951 1.30608
|
|
|
2498 1.38629 1.38629 1.38629 1.38629
|
|
|
2499 0.03515 4.05868 4.05868 1.46634 0.26236 0.00000 *
|
|
|
2500 1 0.67175 2.28147 2.23032 1.27454 1 - -
|
|
|
2501 1.38629 1.38629 1.38629 1.38629
|
|
|
2502 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2503 2 3.17198 2.64807 3.21692 0.16580 2 - -
|
|
|
2504 1.38629 1.38629 1.38629 1.38629
|
|
|
2505 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2506 3 2.21370 2.19922 1.35245 0.65160 3 - -
|
|
|
2507 1.38629 1.38629 1.38629 1.38629
|
|
|
2508 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2509 4 3.17198 2.64807 3.21692 0.16580 4 - -
|
|
|
2510 1.38629 1.38629 1.38629 1.38629
|
|
|
2511 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2512 5 3.52713 0.11953 3.57250 2.89695 5 - -
|
|
|
2513 1.38629 1.38629 1.38629 1.38629
|
|
|
2514 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2515 6 3.00378 3.67011 0.10853 3.58348 6 - -
|
|
|
2516 1.38629 1.38629 1.38629 1.38629
|
|
|
2517 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2518 7 3.52713 0.11953 3.57250 2.89695 7 - -
|
|
|
2519 1.38629 1.38629 1.38629 1.38629
|
|
|
2520 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2521 8 3.52713 0.11953 3.57250 2.89695 8 - -
|
|
|
2522 1.38629 1.38629 1.38629 1.38629
|
|
|
2523 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2524 9 3.17198 2.64807 3.21692 0.16580 9 - -
|
|
|
2525 1.38629 1.38629 1.38629 1.38629
|
|
|
2526 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2527 10 3.52713 0.11953 3.57250 2.89695 10 - -
|
|
|
2528 1.38629 1.38629 1.38629 1.38629
|
|
|
2529 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2530 11 0.13155 3.46209 2.85482 3.37161 11 - -
|
|
|
2531 1.38629 1.38629 1.38629 1.38629
|
|
|
2532 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2533 12 3.17198 2.64807 3.21692 0.16580 12 - -
|
|
|
2534 1.38629 1.38629 1.38629 1.38629
|
|
|
2535 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2536 13 3.52713 0.11953 3.57250 2.89695 13 - -
|
|
|
2537 1.38629 1.38629 1.38629 1.38629
|
|
|
2538 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2539 14 3.52713 0.11953 3.57250 2.89695 14 - -
|
|
|
2540 1.38629 1.38629 1.38629 1.38629
|
|
|
2541 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2542 15 0.13155 3.46209 2.85482 3.37161 15 - -
|
|
|
2543 1.38629 1.38629 1.38629 1.38629
|
|
|
2544 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2545 16 0.13155 3.46209 2.85482 3.37161 16 - -
|
|
|
2546 1.38629 1.38629 1.38629 1.38629
|
|
|
2547 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2548 17 3.00378 3.67011 0.10853 3.58348 17 - -
|
|
|
2549 1.38629 1.38629 1.38629 1.38629
|
|
|
2550 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2551 18 3.17198 2.64807 3.21692 0.16580 18 - -
|
|
|
2552 1.38629 1.38629 1.38629 1.38629
|
|
|
2553 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2554 19 0.13155 3.46209 2.85482 3.37161 19 - -
|
|
|
2555 1.38629 1.38629 1.38629 1.38629
|
|
|
2556 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2557 20 0.13155 3.46209 2.85482 3.37161 20 - -
|
|
|
2558 1.38629 1.38629 1.38629 1.38629
|
|
|
2559 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2560 21 3.00378 3.67011 0.10853 3.58348 21 - -
|
|
|
2561 1.38629 1.38629 1.38629 1.38629
|
|
|
2562 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2563 22 0.13155 3.46209 2.85482 3.37161 22 - -
|
|
|
2564 1.38629 1.38629 1.38629 1.38629
|
|
|
2565 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2566 23 3.17198 2.64807 3.21692 0.16580 23 - -
|
|
|
2567 1.38629 1.38629 1.38629 1.38629
|
|
|
2568 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2569 24 3.17198 2.64807 3.21692 0.16580 24 - -
|
|
|
2570 1.38629 1.38629 1.38629 1.38629
|
|
|
2571 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2572 25 0.13155 3.46209 2.85482 3.37161 25 - -
|
|
|
2573 1.38629 1.38629 1.38629 1.38629
|
|
|
2574 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2575 26 3.52713 0.11953 3.57250 2.89695 26 - -
|
|
|
2576 1.38629 1.38629 1.38629 1.38629
|
|
|
2577 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2578 27 3.52713 0.11953 3.57250 2.89695 27 - -
|
|
|
2579 1.38629 1.38629 1.38629 1.38629
|
|
|
2580 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2581 28 3.52713 0.11953 3.57250 2.89695 28 - -
|
|
|
2582 1.38629 1.38629 1.38629 1.38629
|
|
|
2583 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2584 29 3.00378 3.67011 0.10853 3.58348 29 - -
|
|
|
2585 1.38629 1.38629 1.38629 1.38629
|
|
|
2586 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2587 30 3.52713 0.11953 3.57250 2.89695 30 - -
|
|
|
2588 1.38629 1.38629 1.38629 1.38629
|
|
|
2589 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2590 31 3.17198 2.64807 3.21692 0.16580 31 - -
|
|
|
2591 1.38629 1.38629 1.38629 1.38629
|
|
|
2592 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2593 32 3.00378 3.67011 0.10853 3.58348 32 - -
|
|
|
2594 1.38629 1.38629 1.38629 1.38629
|
|
|
2595 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2596 33 0.13155 3.46209 2.85482 3.37161 33 - -
|
|
|
2597 1.38629 1.38629 1.38629 1.38629
|
|
|
2598 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2599 34 0.13155 3.46209 2.85482 3.37161 34 - -
|
|
|
2600 1.38629 1.38629 1.38629 1.38629
|
|
|
2601 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2602 35 3.52713 0.11953 3.57250 2.89695 35 - -
|
|
|
2603 1.38629 1.38629 1.38629 1.38629
|
|
|
2604 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2605 36 3.17198 2.64807 3.21692 0.16580 36 - -
|
|
|
2606 1.38629 1.38629 1.38629 1.38629
|
|
|
2607 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2608 37 3.17198 2.64807 3.21692 0.16580 37 - -
|
|
|
2609 1.38629 1.38629 1.38629 1.38629
|
|
|
2610 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2611 38 0.13155 3.46209 2.85482 3.37161 38 - -
|
|
|
2612 1.38629 1.38629 1.38629 1.38629
|
|
|
2613 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2614 39 0.13155 3.46209 2.85482 3.37161 39 - -
|
|
|
2615 1.38629 1.38629 1.38629 1.38629
|
|
|
2616 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2617 40 3.00378 3.67011 0.10853 3.58348 40 - -
|
|
|
2618 1.38629 1.38629 1.38629 1.38629
|
|
|
2619 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2620 41 3.52713 0.11953 3.57250 2.89695 41 - -
|
|
|
2621 1.38629 1.38629 1.38629 1.38629
|
|
|
2622 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2623 42 0.13155 3.46209 2.85482 3.37161 42 - -
|
|
|
2624 1.38629 1.38629 1.38629 1.38629
|
|
|
2625 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2626 43 3.17198 2.64807 3.21692 0.16580 43 - -
|
|
|
2627 1.38629 1.38629 1.38629 1.38629
|
|
|
2628 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2629 44 0.13155 3.46209 2.85482 3.37161 44 - -
|
|
|
2630 1.38629 1.38629 1.38629 1.38629
|
|
|
2631 0.03515 4.05868 4.05868 1.46634 0.26236 1.09861 0.40547
|
|
|
2632 45 3.17198 2.64807 3.21692 0.16580 45 - -
|
|
|
2633 1.38629 1.38629 1.38629 1.38629
|
|
|
2634 0.01773 4.04126 * 1.46634 0.26236 0.00000 *
|
|
|
2635 //
|
|
|
2636 HMMER3/b [3.0 | March 2010]
|
|
|
2637 NAME 1_SSU_Amoebozoa_1_SSU_end_onea_long
|
|
|
2638 LENG 45
|
|
|
2639 ALPH DNA
|
|
|
2640 RF no
|
|
|
2641 CS no
|
|
|
2642 MAP yes
|
|
|
2643 DATE Fri Jan 20 22:26:03 2012
|
|
|
2644 NSEQ 50
|
|
|
2645 EFFN 3.311157
|
|
|
2646 CKSUM 580143303
|
|
|
2647 STATS LOCAL MSV -8.0808 0.71933
|
|
|
2648 STATS LOCAL VITERBI -7.6783 0.71933
|
|
|
2649 STATS LOCAL FORWARD -4.0882 0.71933
|
|
|
2650 HMM A C G T
|
|
|
2651 m->m m->i m->d i->m i->i d->m d->d
|
|
|
2652 COMPO 1.26882 1.71702 1.24405 1.38222
|
|
|
2653 1.38629 1.38629 1.38629 1.38629
|
|
|
2654 0.03696 4.00936 4.00936 1.46634 0.26236 0.00000 *
|
|
|
2655 1 0.14238 3.37657 2.79952 3.27788 1 - -
|
|
|
2656 1.38629 1.38629 1.38629 1.38629
|
|
|
2657 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2658 2 2.94495 3.58400 0.11757 3.48828 2 - -
|
|
|
2659 1.38629 1.38629 1.38629 1.38629
|
|
|
2660 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2661 3 3.01055 2.41279 3.06138 0.20537 3 - -
|
|
|
2662 1.38629 1.38629 1.38629 1.38629
|
|
|
2663 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2664 4 3.42885 0.13072 3.47849 2.82590 4 - -
|
|
|
2665 1.38629 1.38629 1.38629 1.38629
|
|
|
2666 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2667 5 2.94495 3.58400 0.11757 3.48828 5 - -
|
|
|
2668 1.38629 1.38629 1.38629 1.38629
|
|
|
2669 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2670 6 3.01055 2.41279 3.06138 0.20537 6 - -
|
|
|
2671 1.38629 1.38629 1.38629 1.38629
|
|
|
2672 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2673 7 0.14238 3.37657 2.79952 3.27788 7 - -
|
|
|
2674 1.38629 1.38629 1.38629 1.38629
|
|
|
2675 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2676 8 0.14238 3.37657 2.79952 3.27788 8 - -
|
|
|
2677 1.38629 1.38629 1.38629 1.38629
|
|
|
2678 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2679 9 3.42885 0.13072 3.47849 2.82590 9 - -
|
|
|
2680 1.38629 1.38629 1.38629 1.38629
|
|
|
2681 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2682 10 0.14238 3.37657 2.79952 3.27788 10 - -
|
|
|
2683 1.38629 1.38629 1.38629 1.38629
|
|
|
2684 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2685 11 0.14238 3.37657 2.79952 3.27788 11 - -
|
|
|
2686 1.38629 1.38629 1.38629 1.38629
|
|
|
2687 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2688 12 2.94495 3.58400 0.11757 3.48828 12 - -
|
|
|
2689 1.38629 1.38629 1.38629 1.38629
|
|
|
2690 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2691 13 2.94495 3.58400 0.11757 3.48828 13 - -
|
|
|
2692 1.38629 1.38629 1.38629 1.38629
|
|
|
2693 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2694 14 3.08488 2.59277 3.13318 0.17928 14 - -
|
|
|
2695 1.38629 1.38629 1.38629 1.38629
|
|
|
2696 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2697 15 0.14238 3.37657 2.79952 3.27788 15 - -
|
|
|
2698 1.38629 1.38629 1.38629 1.38629
|
|
|
2699 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2700 16 3.08488 2.59277 3.13318 0.17928 16 - -
|
|
|
2701 1.38629 1.38629 1.38629 1.38629
|
|
|
2702 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2703 17 3.08488 2.59277 3.13318 0.17928 17 - -
|
|
|
2704 1.38629 1.38629 1.38629 1.38629
|
|
|
2705 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2706 18 3.24463 0.17310 3.29975 2.48809 18 - -
|
|
|
2707 1.38629 1.38629 1.38629 1.38629
|
|
|
2708 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2709 19 2.94495 3.58400 0.11757 3.48828 19 - -
|
|
|
2710 1.38629 1.38629 1.38629 1.38629
|
|
|
2711 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2712 20 3.08488 2.59277 3.13318 0.17928 20 - -
|
|
|
2713 1.38629 1.38629 1.38629 1.38629
|
|
|
2714 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2715 21 0.14238 3.37657 2.79952 3.27788 21 - -
|
|
|
2716 1.38629 1.38629 1.38629 1.38629
|
|
|
2717 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2718 22 2.94495 3.58400 0.11757 3.48828 22 - -
|
|
|
2719 1.38629 1.38629 1.38629 1.38629
|
|
|
2720 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2721 23 2.94495 3.58400 0.11757 3.48828 23 - -
|
|
|
2722 1.38629 1.38629 1.38629 1.38629
|
|
|
2723 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2724 24 3.08488 2.59277 3.13318 0.17928 24 - -
|
|
|
2725 1.38629 1.38629 1.38629 1.38629
|
|
|
2726 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2727 25 2.94495 3.58400 0.11757 3.48828 25 - -
|
|
|
2728 1.38629 1.38629 1.38629 1.38629
|
|
|
2729 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2730 26 0.14238 3.37657 2.79952 3.27788 26 - -
|
|
|
2731 1.38629 1.38629 1.38629 1.38629
|
|
|
2732 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2733 27 0.14238 3.37657 2.79952 3.27788 27 - -
|
|
|
2734 1.38629 1.38629 1.38629 1.38629
|
|
|
2735 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2736 28 3.42885 0.13072 3.47849 2.82590 28 - -
|
|
|
2737 1.38629 1.38629 1.38629 1.38629
|
|
|
2738 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2739 29 3.42885 0.13072 3.47849 2.82590 29 - -
|
|
|
2740 1.38629 1.38629 1.38629 1.38629
|
|
|
2741 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2742 30 3.01055 2.41279 3.06138 0.20537 30 - -
|
|
|
2743 1.38629 1.38629 1.38629 1.38629
|
|
|
2744 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2745 31 2.94495 3.58400 0.11757 3.48828 31 - -
|
|
|
2746 1.38629 1.38629 1.38629 1.38629
|
|
|
2747 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2748 32 3.31480 0.15590 3.36776 2.60981 32 - -
|
|
|
2749 1.38629 1.38629 1.38629 1.38629
|
|
|
2750 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2751 33 2.94495 3.58400 0.11757 3.48828 33 - -
|
|
|
2752 1.38629 1.38629 1.38629 1.38629
|
|
|
2753 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2754 34 2.94495 3.58400 0.11757 3.48828 34 - -
|
|
|
2755 1.38629 1.38629 1.38629 1.38629
|
|
|
2756 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2757 35 0.14238 3.37657 2.79952 3.27788 35 - -
|
|
|
2758 1.38629 1.38629 1.38629 1.38629
|
|
|
2759 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2760 36 3.08488 2.59277 3.13318 0.17928 36 - -
|
|
|
2761 1.38629 1.38629 1.38629 1.38629
|
|
|
2762 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2763 37 2.94495 3.58400 0.11757 3.48828 37 - -
|
|
|
2764 1.38629 1.38629 1.38629 1.38629
|
|
|
2765 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2766 38 2.94495 3.58400 0.11757 3.48828 38 - -
|
|
|
2767 1.38629 1.38629 1.38629 1.38629
|
|
|
2768 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2769 39 0.14238 3.37657 2.79952 3.27788 39 - -
|
|
|
2770 1.38629 1.38629 1.38629 1.38629
|
|
|
2771 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2772 40 3.08488 2.59277 3.13318 0.17928 40 - -
|
|
|
2773 1.38629 1.38629 1.38629 1.38629
|
|
|
2774 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2775 41 3.42885 0.13072 3.47849 2.82590 41 - -
|
|
|
2776 1.38629 1.38629 1.38629 1.38629
|
|
|
2777 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2778 42 0.14238 3.37657 2.79952 3.27788 42 - -
|
|
|
2779 1.38629 1.38629 1.38629 1.38629
|
|
|
2780 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2781 43 3.08488 2.59277 3.13318 0.17928 43 - -
|
|
|
2782 1.38629 1.38629 1.38629 1.38629
|
|
|
2783 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2784 44 3.08488 2.59277 3.13318 0.17928 44 - -
|
|
|
2785 1.38629 1.38629 1.38629 1.38629
|
|
|
2786 0.03696 4.00936 4.00936 1.46634 0.26236 1.09861 0.40547
|
|
|
2787 45 0.14238 3.37657 2.79952 3.27788 45 - -
|
|
|
2788 1.38629 1.38629 1.38629 1.38629
|
|
|
2789 0.01865 3.99105 * 1.46634 0.26236 0.00000 *
|
|
|
2790 //
|
|
|
2791 HMMER3/b [3.0 | March 2010]
|
|
|
2792 NAME 1_SSU_Amoebozoa_1_SSU_end_oneb_long
|
|
|
2793 LENG 45
|
|
|
2794 ALPH DNA
|
|
|
2795 RF no
|
|
|
2796 CS no
|
|
|
2797 MAP yes
|
|
|
2798 DATE Fri Jan 20 22:26:13 2012
|
|
|
2799 NSEQ 12
|
|
|
2800 EFFN 3.477539
|
|
|
2801 CKSUM 3078232557
|
|
|
2802 STATS LOCAL MSV -7.3971 0.71932
|
|
|
2803 STATS LOCAL VITERBI -7.6461 0.71932
|
|
|
2804 STATS LOCAL FORWARD -4.1544 0.71932
|
|
|
2805 HMM A C G T
|
|
|
2806 m->m m->i m->d i->m i->i d->m d->d
|
|
|
2807 COMPO 1.31721 1.62507 1.26310 1.37656
|
|
|
2808 1.38629 1.38629 1.38629 1.38629
|
|
|
2809 0.03586 4.03910 4.03910 1.46634 0.26236 0.00000 *
|
|
|
2810 1 0.13568 3.42858 2.83322 3.33486 1 - -
|
|
|
2811 1.38629 1.38629 1.38629 1.38629
|
|
|
2812 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2813 2 2.98094 3.63655 0.11196 3.54635 2 - -
|
|
|
2814 1.38629 1.38629 1.38629 1.38629
|
|
|
2815 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2816 3 3.13765 2.62630 3.18392 0.17097 3 - -
|
|
|
2817 1.38629 1.38629 1.38629 1.38629
|
|
|
2818 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2819 4 3.48870 0.12377 3.53577 2.86929 4 - -
|
|
|
2820 1.38629 1.38629 1.38629 1.38629
|
|
|
2821 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2822 5 2.98094 3.63655 0.11196 3.54635 5 - -
|
|
|
2823 1.38629 1.38629 1.38629 1.38629
|
|
|
2824 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2825 6 3.13765 2.62630 3.18392 0.17097 6 - -
|
|
|
2826 1.38629 1.38629 1.38629 1.38629
|
|
|
2827 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2828 7 0.13568 3.42858 2.83322 3.33486 7 - -
|
|
|
2829 1.38629 1.38629 1.38629 1.38629
|
|
|
2830 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2831 8 0.13568 3.42858 2.83322 3.33486 8 - -
|
|
|
2832 1.38629 1.38629 1.38629 1.38629
|
|
|
2833 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2834 9 3.48870 0.12377 3.53577 2.86929 9 - -
|
|
|
2835 1.38629 1.38629 1.38629 1.38629
|
|
|
2836 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2837 10 0.13568 3.42858 2.83322 3.33486 10 - -
|
|
|
2838 1.38629 1.38629 1.38629 1.38629
|
|
|
2839 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2840 11 0.13568 3.42858 2.83322 3.33486 11 - -
|
|
|
2841 1.38629 1.38629 1.38629 1.38629
|
|
|
2842 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2843 12 2.98094 3.63655 0.11196 3.54635 12 - -
|
|
|
2844 1.38629 1.38629 1.38629 1.38629
|
|
|
2845 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2846 13 2.98094 3.63655 0.11196 3.54635 13 - -
|
|
|
2847 1.38629 1.38629 1.38629 1.38629
|
|
|
2848 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2849 14 3.13765 2.62630 3.18392 0.17097 14 - -
|
|
|
2850 1.38629 1.38629 1.38629 1.38629
|
|
|
2851 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2852 15 0.13568 3.42858 2.83322 3.33486 15 - -
|
|
|
2853 1.38629 1.38629 1.38629 1.38629
|
|
|
2854 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2855 16 3.13765 2.62630 3.18392 0.17097 16 - -
|
|
|
2856 1.38629 1.38629 1.38629 1.38629
|
|
|
2857 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2858 17 3.48870 0.12377 3.53577 2.86929 17 - -
|
|
|
2859 1.38629 1.38629 1.38629 1.38629
|
|
|
2860 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2861 18 2.78716 0.27620 2.35451 2.46742 18 - -
|
|
|
2862 1.38629 1.38629 1.38629 1.38629
|
|
|
2863 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2864 19 2.98094 3.63655 0.11196 3.54635 19 - -
|
|
|
2865 1.38629 1.38629 1.38629 1.38629
|
|
|
2866 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2867 20 3.13765 2.62630 3.18392 0.17097 20 - -
|
|
|
2868 1.38629 1.38629 1.38629 1.38629
|
|
|
2869 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2870 21 0.13568 3.42858 2.83322 3.33486 21 - -
|
|
|
2871 1.38629 1.38629 1.38629 1.38629
|
|
|
2872 0.32896 4.03910 1.33668 1.46634 0.26236 1.09861 0.40547
|
|
|
2873 22 2.56939 3.07022 0.19408 2.92959 22 - -
|
|
|
2874 1.38629 1.38629 1.38629 1.38629
|
|
|
2875 0.04779 3.75793 3.75793 1.46634 0.26236 0.12583 2.13510
|
|
|
2876 23 2.98094 3.63655 0.11196 3.54635 23 - -
|
|
|
2877 1.38629 1.38629 1.38629 1.38629
|
|
|
2878 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2879 24 3.13765 2.62630 3.18392 0.17097 24 - -
|
|
|
2880 1.38629 1.38629 1.38629 1.38629
|
|
|
2881 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2882 25 2.98094 3.63655 0.11196 3.54635 25 - -
|
|
|
2883 1.38629 1.38629 1.38629 1.38629
|
|
|
2884 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2885 26 0.13568 3.42858 2.83322 3.33486 26 - -
|
|
|
2886 1.38629 1.38629 1.38629 1.38629
|
|
|
2887 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2888 27 0.13568 3.42858 2.83322 3.33486 27 - -
|
|
|
2889 1.38629 1.38629 1.38629 1.38629
|
|
|
2890 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2891 28 3.48870 0.12377 3.53577 2.86929 28 - -
|
|
|
2892 1.38629 1.38629 1.38629 1.38629
|
|
|
2893 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2894 29 3.48870 0.12377 3.53577 2.86929 29 - -
|
|
|
2895 1.38629 1.38629 1.38629 1.38629
|
|
|
2896 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2897 30 3.13765 2.62630 3.18392 0.17097 30 - -
|
|
|
2898 1.38629 1.38629 1.38629 1.38629
|
|
|
2899 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2900 31 2.98094 3.63655 0.11196 3.54635 31 - -
|
|
|
2901 1.38629 1.38629 1.38629 1.38629
|
|
|
2902 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2903 32 3.48870 0.12377 3.53577 2.86929 32 - -
|
|
|
2904 1.38629 1.38629 1.38629 1.38629
|
|
|
2905 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2906 33 2.62697 2.44597 0.24485 2.84327 33 - -
|
|
|
2907 1.38629 1.38629 1.38629 1.38629
|
|
|
2908 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2909 34 2.98094 3.63655 0.11196 3.54635 34 - -
|
|
|
2910 1.38629 1.38629 1.38629 1.38629
|
|
|
2911 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2912 35 0.13568 3.42858 2.83322 3.33486 35 - -
|
|
|
2913 1.38629 1.38629 1.38629 1.38629
|
|
|
2914 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2915 36 3.13765 2.62630 3.18392 0.17097 36 - -
|
|
|
2916 1.38629 1.38629 1.38629 1.38629
|
|
|
2917 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2918 37 2.98094 3.63655 0.11196 3.54635 37 - -
|
|
|
2919 1.38629 1.38629 1.38629 1.38629
|
|
|
2920 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2921 38 2.98094 3.63655 0.11196 3.54635 38 - -
|
|
|
2922 1.38629 1.38629 1.38629 1.38629
|
|
|
2923 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2924 39 0.13568 3.42858 2.83322 3.33486 39 - -
|
|
|
2925 1.38629 1.38629 1.38629 1.38629
|
|
|
2926 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2927 40 3.13765 2.62630 3.18392 0.17097 40 - -
|
|
|
2928 1.38629 1.38629 1.38629 1.38629
|
|
|
2929 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2930 41 3.48870 0.12377 3.53577 2.86929 41 - -
|
|
|
2931 1.38629 1.38629 1.38629 1.38629
|
|
|
2932 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2933 42 0.13568 3.42858 2.83322 3.33486 42 - -
|
|
|
2934 1.38629 1.38629 1.38629 1.38629
|
|
|
2935 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2936 43 3.13765 2.62630 3.18392 0.17097 43 - -
|
|
|
2937 1.38629 1.38629 1.38629 1.38629
|
|
|
2938 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2939 44 3.13765 2.62630 3.18392 0.17097 44 - -
|
|
|
2940 1.38629 1.38629 1.38629 1.38629
|
|
|
2941 0.03586 4.03910 4.03910 1.46634 0.26236 1.09861 0.40547
|
|
|
2942 45 2.10018 2.39300 2.66436 0.33328 45 - -
|
|
|
2943 1.38629 1.38629 1.38629 1.38629
|
|
|
2944 0.01809 4.02133 * 1.46634 0.26236 0.00000 *
|
|
|
2945 //
|
|
|
2946 HMMER3/b [3.0 | March 2010]
|
|
|
2947 NAME 1_SSU_Amoebozoa_1_SSU_end_onec_long
|
|
|
2948 LENG 45
|
|
|
2949 ALPH DNA
|
|
|
2950 RF no
|
|
|
2951 CS no
|
|
|
2952 MAP yes
|
|
|
2953 DATE Fri Jan 20 22:26:19 2012
|
|
|
2954 NSEQ 13
|
|
|
2955 EFFN 3.240479
|
|
|
2956 CKSUM 1661502292
|
|
|
2957 STATS LOCAL MSV -8.0638 0.71932
|
|
|
2958 STATS LOCAL VITERBI -7.7447 0.71932
|
|
|
2959 STATS LOCAL FORWARD -4.3884 0.71932
|
|
|
2960 HMM A C G T
|
|
|
2961 m->m m->i m->d i->m i->i d->m d->d
|
|
|
2962 COMPO 1.34170 1.54513 1.18912 1.51038
|
|
|
2963 1.38629 1.38629 1.38629 1.38629
|
|
|
2964 0.03745 3.99645 3.99645 1.46634 0.26236 0.00000 *
|
|
|
2965 1 0.14547 3.35358 2.78456 3.25273 1 - -
|
|
|
2966 1.38629 1.38629 1.38629 1.38629
|
|
|
2967 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
2968 2 2.92882 3.56061 0.12017 3.46248 2 - -
|
|
|
2969 1.38629 1.38629 1.38629 1.38629
|
|
|
2970 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
2971 3 3.06176 2.57805 3.11093 0.18307 3 - -
|
|
|
2972 1.38629 1.38629 1.38629 1.38629
|
|
|
2973 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
2974 4 3.40234 0.13394 3.45309 2.80654 4 - -
|
|
|
2975 1.38629 1.38629 1.38629 1.38629
|
|
|
2976 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
2977 5 2.92882 3.56061 0.12017 3.46248 5 - -
|
|
|
2978 1.38629 1.38629 1.38629 1.38629
|
|
|
2979 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
2980 6 3.06176 2.57805 3.11093 0.18307 6 - -
|
|
|
2981 1.38629 1.38629 1.38629 1.38629
|
|
|
2982 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
2983 7 0.14547 3.35358 2.78456 3.25273 7 - -
|
|
|
2984 1.38629 1.38629 1.38629 1.38629
|
|
|
2985 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
2986 8 0.14547 3.35358 2.78456 3.25273 8 - -
|
|
|
2987 1.38629 1.38629 1.38629 1.38629
|
|
|
2988 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
2989 9 3.40234 0.13394 3.45309 2.80654 9 - -
|
|
|
2990 1.38629 1.38629 1.38629 1.38629
|
|
|
2991 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
2992 10 0.14547 3.35358 2.78456 3.25273 10 - -
|
|
|
2993 1.38629 1.38629 1.38629 1.38629
|
|
|
2994 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
2995 11 0.14547 3.35358 2.78456 3.25273 11 - -
|
|
|
2996 1.38629 1.38629 1.38629 1.38629
|
|
|
2997 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
2998 12 2.92882 3.56061 0.12017 3.46248 12 - -
|
|
|
2999 1.38629 1.38629 1.38629 1.38629
|
|
|
3000 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3001 13 2.92882 3.56061 0.12017 3.46248 13 - -
|
|
|
3002 1.38629 1.38629 1.38629 1.38629
|
|
|
3003 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3004 14 3.06176 2.57805 3.11093 0.18307 14 - -
|
|
|
3005 1.38629 1.38629 1.38629 1.38629
|
|
|
3006 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3007 15 3.40234 0.13394 3.45309 2.80654 15 - -
|
|
|
3008 1.38629 1.38629 1.38629 1.38629
|
|
|
3009 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3010 16 3.06176 2.57805 3.11093 0.18307 16 - -
|
|
|
3011 1.38629 1.38629 1.38629 1.38629
|
|
|
3012 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3013 17 3.40234 0.13394 3.45309 2.80654 17 - -
|
|
|
3014 1.38629 1.38629 1.38629 1.38629
|
|
|
3015 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3016 18 3.40234 0.13394 3.45309 2.80654 18 - -
|
|
|
3017 1.38629 1.38629 1.38629 1.38629
|
|
|
3018 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3019 19 2.92882 3.56061 0.12017 3.46248 19 - -
|
|
|
3020 1.38629 1.38629 1.38629 1.38629
|
|
|
3021 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3022 20 3.06176 2.57805 3.11093 0.18307 20 - -
|
|
|
3023 1.38629 1.38629 1.38629 1.38629
|
|
|
3024 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3025 21 0.14547 3.35358 2.78456 3.25273 21 - -
|
|
|
3026 1.38629 1.38629 1.38629 1.38629
|
|
|
3027 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3028 22 2.92882 3.56061 0.12017 3.46248 22 - -
|
|
|
3029 1.38629 1.38629 1.38629 1.38629
|
|
|
3030 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3031 23 2.92882 3.56061 0.12017 3.46248 23 - -
|
|
|
3032 1.38629 1.38629 1.38629 1.38629
|
|
|
3033 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3034 24 3.06176 2.57805 3.11093 0.18307 24 - -
|
|
|
3035 1.38629 1.38629 1.38629 1.38629
|
|
|
3036 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3037 25 2.92882 3.56061 0.12017 3.46248 25 - -
|
|
|
3038 1.38629 1.38629 1.38629 1.38629
|
|
|
3039 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3040 26 0.14547 3.35358 2.78456 3.25273 26 - -
|
|
|
3041 1.38629 1.38629 1.38629 1.38629
|
|
|
3042 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3043 27 0.14547 3.35358 2.78456 3.25273 27 - -
|
|
|
3044 1.38629 1.38629 1.38629 1.38629
|
|
|
3045 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3046 28 3.40234 0.13394 3.45309 2.80654 28 - -
|
|
|
3047 1.38629 1.38629 1.38629 1.38629
|
|
|
3048 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3049 29 3.40234 0.13394 3.45309 2.80654 29 - -
|
|
|
3050 1.38629 1.38629 1.38629 1.38629
|
|
|
3051 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3052 30 3.06176 2.57805 3.11093 0.18307 30 - -
|
|
|
3053 1.38629 1.38629 1.38629 1.38629
|
|
|
3054 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3055 31 2.92882 3.56061 0.12017 3.46248 31 - -
|
|
|
3056 1.38629 1.38629 1.38629 1.38629
|
|
|
3057 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3058 32 3.40234 0.13394 3.45309 2.80654 32 - -
|
|
|
3059 1.38629 1.38629 1.38629 1.38629
|
|
|
3060 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3061 33 2.92882 3.56061 0.12017 3.46248 33 - -
|
|
|
3062 1.38629 1.38629 1.38629 1.38629
|
|
|
3063 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3064 34 2.92882 3.56061 0.12017 3.46248 34 - -
|
|
|
3065 1.38629 1.38629 1.38629 1.38629
|
|
|
3066 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3067 35 0.14547 3.35358 2.78456 3.25273 35 - -
|
|
|
3068 1.38629 1.38629 1.38629 1.38629
|
|
|
3069 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3070 36 2.92882 3.56061 0.12017 3.46248 36 - -
|
|
|
3071 1.38629 1.38629 1.38629 1.38629
|
|
|
3072 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3073 37 2.92882 3.56061 0.12017 3.46248 37 - -
|
|
|
3074 1.38629 1.38629 1.38629 1.38629
|
|
|
3075 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3076 38 2.92882 3.56061 0.12017 3.46248 38 - -
|
|
|
3077 1.38629 1.38629 1.38629 1.38629
|
|
|
3078 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3079 39 0.14547 3.35358 2.78456 3.25273 39 - -
|
|
|
3080 1.38629 1.38629 1.38629 1.38629
|
|
|
3081 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3082 40 3.06176 2.57805 3.11093 0.18307 40 - -
|
|
|
3083 1.38629 1.38629 1.38629 1.38629
|
|
|
3084 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3085 41 3.40234 0.13394 3.45309 2.80654 41 - -
|
|
|
3086 1.38629 1.38629 1.38629 1.38629
|
|
|
3087 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3088 42 0.14547 3.35358 2.78456 3.25273 42 - -
|
|
|
3089 1.38629 1.38629 1.38629 1.38629
|
|
|
3090 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3091 43 3.06176 2.57805 3.11093 0.18307 43 - -
|
|
|
3092 1.38629 1.38629 1.38629 1.38629
|
|
|
3093 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3094 44 3.06176 2.57805 3.11093 0.18307 44 - -
|
|
|
3095 1.38629 1.38629 1.38629 1.38629
|
|
|
3096 0.03745 3.99645 3.99645 1.46634 0.26236 1.09861 0.40547
|
|
|
3097 45 0.26665 2.85378 2.54466 2.32346 45 - -
|
|
|
3098 1.38629 1.38629 1.38629 1.38629
|
|
|
3099 0.01890 3.97790 * 1.46634 0.26236 0.00000 *
|
|
|
3100 //
|
|
|
3101 HMMER3/b [3.0 | March 2010]
|
|
|
3102 NAME 1_SSU_Amoebozoa_1_SSU_end_oned_long
|
|
|
3103 LENG 45
|
|
|
3104 ALPH DNA
|
|
|
3105 RF no
|
|
|
3106 CS no
|
|
|
3107 MAP yes
|
|
|
3108 DATE Fri Jan 20 22:26:33 2012
|
|
|
3109 NSEQ 14
|
|
|
3110 EFFN 3.305176
|
|
|
3111 CKSUM 2249141990
|
|
|
3112 STATS LOCAL MSV -8.0858 0.71933
|
|
|
3113 STATS LOCAL VITERBI -7.7838 0.71933
|
|
|
3114 STATS LOCAL FORWARD -4.1454 0.71933
|
|
|
3115 HMM A C G T
|
|
|
3116 m->m m->i m->d i->m i->i d->m d->d
|
|
|
3117 COMPO 1.27019 1.70539 1.30694 1.32098
|
|
|
3118 1.38629 1.38629 1.38629 1.38629
|
|
|
3119 0.03701 4.00827 4.00827 1.46634 0.26236 0.00000 *
|
|
|
3120 1 0.14264 3.37464 2.79827 3.27577 1 - -
|
|
|
3121 1.38629 1.38629 1.38629 1.38629
|
|
|
3122 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3123 2 2.94360 3.58205 0.11779 3.48613 2 - -
|
|
|
3124 1.38629 1.38629 1.38629 1.38629
|
|
|
3125 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3126 3 3.08294 2.59153 3.13131 0.17959 3 - -
|
|
|
3127 1.38629 1.38629 1.38629 1.38629
|
|
|
3128 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3129 4 3.42663 0.13098 3.47636 2.82428 4 - -
|
|
|
3130 1.38629 1.38629 1.38629 1.38629
|
|
|
3131 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3132 5 2.94360 3.58205 0.11779 3.48613 5 - -
|
|
|
3133 1.38629 1.38629 1.38629 1.38629
|
|
|
3134 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3135 6 3.08294 2.59153 3.13131 0.17959 6 - -
|
|
|
3136 1.38629 1.38629 1.38629 1.38629
|
|
|
3137 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3138 7 0.14264 3.37464 2.79827 3.27577 7 - -
|
|
|
3139 1.38629 1.38629 1.38629 1.38629
|
|
|
3140 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3141 8 0.14264 3.37464 2.79827 3.27577 8 - -
|
|
|
3142 1.38629 1.38629 1.38629 1.38629
|
|
|
3143 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3144 9 3.42663 0.13098 3.47636 2.82428 9 - -
|
|
|
3145 1.38629 1.38629 1.38629 1.38629
|
|
|
3146 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3147 10 0.14264 3.37464 2.79827 3.27577 10 - -
|
|
|
3148 1.38629 1.38629 1.38629 1.38629
|
|
|
3149 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3150 11 0.14264 3.37464 2.79827 3.27577 11 - -
|
|
|
3151 1.38629 1.38629 1.38629 1.38629
|
|
|
3152 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3153 12 2.94360 3.58205 0.11779 3.48613 12 - -
|
|
|
3154 1.38629 1.38629 1.38629 1.38629
|
|
|
3155 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3156 13 2.94360 3.58205 0.11779 3.48613 13 - -
|
|
|
3157 1.38629 1.38629 1.38629 1.38629
|
|
|
3158 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3159 14 3.08294 2.59153 3.13131 0.17959 14 - -
|
|
|
3160 1.38629 1.38629 1.38629 1.38629
|
|
|
3161 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3162 15 0.14264 3.37464 2.79827 3.27577 15 - -
|
|
|
3163 1.38629 1.38629 1.38629 1.38629
|
|
|
3164 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3165 16 0.14264 3.37464 2.79827 3.27577 16 - -
|
|
|
3166 1.38629 1.38629 1.38629 1.38629
|
|
|
3167 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3168 17 2.89328 2.16089 2.94852 0.25236 17 - -
|
|
|
3169 1.38629 1.38629 1.38629 1.38629
|
|
|
3170 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3171 18 3.42663 0.13098 3.47636 2.82428 18 - -
|
|
|
3172 1.38629 1.38629 1.38629 1.38629
|
|
|
3173 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3174 19 2.94360 3.58205 0.11779 3.48613 19 - -
|
|
|
3175 1.38629 1.38629 1.38629 1.38629
|
|
|
3176 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3177 20 3.08294 2.59153 3.13131 0.17959 20 - -
|
|
|
3178 1.38629 1.38629 1.38629 1.38629
|
|
|
3179 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3180 21 0.14264 3.37464 2.79827 3.27577 21 - -
|
|
|
3181 1.38629 1.38629 1.38629 1.38629
|
|
|
3182 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3183 22 2.94360 3.58205 0.11779 3.48613 22 - -
|
|
|
3184 1.38629 1.38629 1.38629 1.38629
|
|
|
3185 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3186 23 2.94360 3.58205 0.11779 3.48613 23 - -
|
|
|
3187 1.38629 1.38629 1.38629 1.38629
|
|
|
3188 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3189 24 3.08294 2.59153 3.13131 0.17959 24 - -
|
|
|
3190 1.38629 1.38629 1.38629 1.38629
|
|
|
3191 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3192 25 2.94360 3.58205 0.11779 3.48613 25 - -
|
|
|
3193 1.38629 1.38629 1.38629 1.38629
|
|
|
3194 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3195 26 0.14264 3.37464 2.79827 3.27577 26 - -
|
|
|
3196 1.38629 1.38629 1.38629 1.38629
|
|
|
3197 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3198 27 0.14264 3.37464 2.79827 3.27577 27 - -
|
|
|
3199 1.38629 1.38629 1.38629 1.38629
|
|
|
3200 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3201 28 3.42663 0.13098 3.47636 2.82428 28 - -
|
|
|
3202 1.38629 1.38629 1.38629 1.38629
|
|
|
3203 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3204 29 3.42663 0.13098 3.47636 2.82428 29 - -
|
|
|
3205 1.38629 1.38629 1.38629 1.38629
|
|
|
3206 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3207 30 3.08294 2.59153 3.13131 0.17959 30 - -
|
|
|
3208 1.38629 1.38629 1.38629 1.38629
|
|
|
3209 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3210 31 2.94360 3.58205 0.11779 3.48613 31 - -
|
|
|
3211 1.38629 1.38629 1.38629 1.38629
|
|
|
3212 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3213 32 3.42663 0.13098 3.47636 2.82428 32 - -
|
|
|
3214 1.38629 1.38629 1.38629 1.38629
|
|
|
3215 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3216 33 2.94360 3.58205 0.11779 3.48613 33 - -
|
|
|
3217 1.38629 1.38629 1.38629 1.38629
|
|
|
3218 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3219 34 3.08294 2.59153 3.13131 0.17959 34 - -
|
|
|
3220 1.38629 1.38629 1.38629 1.38629
|
|
|
3221 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3222 35 3.08294 2.59153 3.13131 0.17959 35 - -
|
|
|
3223 1.38629 1.38629 1.38629 1.38629
|
|
|
3224 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3225 36 3.08294 2.59153 3.13131 0.17959 36 - -
|
|
|
3226 1.38629 1.38629 1.38629 1.38629
|
|
|
3227 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3228 37 2.94360 3.58205 0.11779 3.48613 37 - -
|
|
|
3229 1.38629 1.38629 1.38629 1.38629
|
|
|
3230 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3231 38 2.94360 3.58205 0.11779 3.48613 38 - -
|
|
|
3232 1.38629 1.38629 1.38629 1.38629
|
|
|
3233 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3234 39 0.14264 3.37464 2.79827 3.27577 39 - -
|
|
|
3235 1.38629 1.38629 1.38629 1.38629
|
|
|
3236 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3237 40 3.08294 2.59153 3.13131 0.17959 40 - -
|
|
|
3238 1.38629 1.38629 1.38629 1.38629
|
|
|
3239 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3240 41 3.42663 0.13098 3.47636 2.82428 41 - -
|
|
|
3241 1.38629 1.38629 1.38629 1.38629
|
|
|
3242 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3243 42 0.14264 3.37464 2.79827 3.27577 42 - -
|
|
|
3244 1.38629 1.38629 1.38629 1.38629
|
|
|
3245 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3246 43 3.08294 2.59153 3.13131 0.17959 43 - -
|
|
|
3247 1.38629 1.38629 1.38629 1.38629
|
|
|
3248 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3249 44 3.08294 2.59153 3.13131 0.17959 44 - -
|
|
|
3250 1.38629 1.38629 1.38629 1.38629
|
|
|
3251 0.03701 4.00827 4.00827 1.46634 0.26236 1.09861 0.40547
|
|
|
3252 45 0.14264 3.37464 2.79827 3.27577 45 - -
|
|
|
3253 1.38629 1.38629 1.38629 1.38629
|
|
|
3254 0.01867 3.98994 * 1.46634 0.26236 0.00000 *
|
|
|
3255 //
|
|
|
3256 HMMER3/b [3.0 | March 2010]
|
|
|
3257 NAME 1_SSU_Amoebozoa_1_SSU_end_threea_long
|
|
|
3258 LENG 45
|
|
|
3259 ALPH DNA
|
|
|
3260 RF no
|
|
|
3261 CS no
|
|
|
3262 MAP yes
|
|
|
3263 DATE Fri Jan 20 22:27:31 2012
|
|
|
3264 NSEQ 16
|
|
|
3265 EFFN 3.175781
|
|
|
3266 CKSUM 572948826
|
|
|
3267 STATS LOCAL MSV -8.0370 0.71932
|
|
|
3268 STATS LOCAL VITERBI -7.7288 0.71932
|
|
|
3269 STATS LOCAL FORWARD -4.0261 0.71932
|
|
|
3270 HMM A C G T
|
|
|
3271 m->m m->i m->d i->m i->i d->m d->d
|
|
|
3272 COMPO 1.15962 1.55332 1.24723 1.67370
|
|
|
3273 1.38629 1.38629 1.38629 1.38629
|
|
|
3274 0.03791 3.98449 3.98449 1.46634 0.26236 0.00000 *
|
|
|
3275 1 0.14843 3.33206 2.77050 3.22920 1 - -
|
|
|
3276 1.38629 1.38629 1.38629 1.38629
|
|
|
3277 0.07696 3.98449 2.89186 1.46634 0.26236 1.09861 0.40547
|
|
|
3278 2 2.86397 3.46759 0.13121 3.36018 2 - -
|
|
|
3279 1.38629 1.38629 1.38629 1.38629
|
|
|
3280 0.03939 3.94692 3.94692 1.46634 0.26236 0.51322 0.91271
|
|
|
3281 3 3.04021 2.56430 3.09020 0.18668 3 - -
|
|
|
3282 1.38629 1.38629 1.38629 1.38629
|
|
|
3283 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3284 4 3.37748 0.13704 3.42926 2.78832 4 - -
|
|
|
3285 1.38629 1.38629 1.38629 1.38629
|
|
|
3286 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3287 5 2.91360 3.53861 0.12268 3.43825 5 - -
|
|
|
3288 1.38629 1.38629 1.38629 1.38629
|
|
|
3289 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3290 6 3.04021 2.56430 3.09020 0.18668 6 - -
|
|
|
3291 1.38629 1.38629 1.38629 1.38629
|
|
|
3292 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3293 7 0.14843 3.33206 2.77050 3.22920 7 - -
|
|
|
3294 1.38629 1.38629 1.38629 1.38629
|
|
|
3295 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3296 8 0.14843 3.33206 2.77050 3.22920 8 - -
|
|
|
3297 1.38629 1.38629 1.38629 1.38629
|
|
|
3298 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3299 9 3.37748 0.13704 3.42926 2.78832 9 - -
|
|
|
3300 1.38629 1.38629 1.38629 1.38629
|
|
|
3301 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3302 10 0.14843 3.33206 2.77050 3.22920 10 - -
|
|
|
3303 1.38629 1.38629 1.38629 1.38629
|
|
|
3304 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3305 11 0.14843 3.33206 2.77050 3.22920 11 - -
|
|
|
3306 1.38629 1.38629 1.38629 1.38629
|
|
|
3307 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3308 12 2.91360 3.53861 0.12268 3.43825 12 - -
|
|
|
3309 1.38629 1.38629 1.38629 1.38629
|
|
|
3310 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3311 13 2.91360 3.53861 0.12268 3.43825 13 - -
|
|
|
3312 1.38629 1.38629 1.38629 1.38629
|
|
|
3313 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3314 14 3.04021 2.56430 3.09020 0.18668 14 - -
|
|
|
3315 1.38629 1.38629 1.38629 1.38629
|
|
|
3316 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3317 15 0.14843 3.33206 2.77050 3.22920 15 - -
|
|
|
3318 1.38629 1.38629 1.38629 1.38629
|
|
|
3319 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3320 16 3.04021 2.56430 3.09020 0.18668 16 - -
|
|
|
3321 1.38629 1.38629 1.38629 1.38629
|
|
|
3322 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3323 17 3.37748 0.13704 3.42926 2.78832 17 - -
|
|
|
3324 1.38629 1.38629 1.38629 1.38629
|
|
|
3325 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3326 18 3.37748 0.13704 3.42926 2.78832 18 - -
|
|
|
3327 1.38629 1.38629 1.38629 1.38629
|
|
|
3328 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3329 19 2.91360 3.53861 0.12268 3.43825 19 - -
|
|
|
3330 1.38629 1.38629 1.38629 1.38629
|
|
|
3331 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3332 20 3.04021 2.56430 3.09020 0.18668 20 - -
|
|
|
3333 1.38629 1.38629 1.38629 1.38629
|
|
|
3334 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3335 21 0.14843 3.33206 2.77050 3.22920 21 - -
|
|
|
3336 1.38629 1.38629 1.38629 1.38629
|
|
|
3337 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3338 22 2.91360 3.53861 0.12268 3.43825 22 - -
|
|
|
3339 1.38629 1.38629 1.38629 1.38629
|
|
|
3340 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3341 23 2.91360 3.53861 0.12268 3.43825 23 - -
|
|
|
3342 1.38629 1.38629 1.38629 1.38629
|
|
|
3343 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3344 24 3.04021 2.56430 3.09020 0.18668 24 - -
|
|
|
3345 1.38629 1.38629 1.38629 1.38629
|
|
|
3346 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3347 25 2.91360 3.53861 0.12268 3.43825 25 - -
|
|
|
3348 1.38629 1.38629 1.38629 1.38629
|
|
|
3349 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3350 26 0.14843 3.33206 2.77050 3.22920 26 - -
|
|
|
3351 1.38629 1.38629 1.38629 1.38629
|
|
|
3352 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3353 27 0.14843 3.33206 2.77050 3.22920 27 - -
|
|
|
3354 1.38629 1.38629 1.38629 1.38629
|
|
|
3355 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3356 28 3.37748 0.13704 3.42926 2.78832 28 - -
|
|
|
3357 1.38629 1.38629 1.38629 1.38629
|
|
|
3358 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3359 29 3.37748 0.13704 3.42926 2.78832 29 - -
|
|
|
3360 1.38629 1.38629 1.38629 1.38629
|
|
|
3361 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3362 30 3.04021 2.56430 3.09020 0.18668 30 - -
|
|
|
3363 1.38629 1.38629 1.38629 1.38629
|
|
|
3364 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3365 31 2.91360 3.53861 0.12268 3.43825 31 - -
|
|
|
3366 1.38629 1.38629 1.38629 1.38629
|
|
|
3367 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3368 32 3.37748 0.13704 3.42926 2.78832 32 - -
|
|
|
3369 1.38629 1.38629 1.38629 1.38629
|
|
|
3370 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3371 33 0.14843 3.33206 2.77050 3.22920 33 - -
|
|
|
3372 1.38629 1.38629 1.38629 1.38629
|
|
|
3373 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3374 34 2.91360 3.53861 0.12268 3.43825 34 - -
|
|
|
3375 1.38629 1.38629 1.38629 1.38629
|
|
|
3376 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3377 35 0.14843 3.33206 2.77050 3.22920 35 - -
|
|
|
3378 1.38629 1.38629 1.38629 1.38629
|
|
|
3379 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3380 36 0.14843 3.33206 2.77050 3.22920 36 - -
|
|
|
3381 1.38629 1.38629 1.38629 1.38629
|
|
|
3382 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3383 37 2.91360 3.53861 0.12268 3.43825 37 - -
|
|
|
3384 1.38629 1.38629 1.38629 1.38629
|
|
|
3385 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3386 38 2.91360 3.53861 0.12268 3.43825 38 - -
|
|
|
3387 1.38629 1.38629 1.38629 1.38629
|
|
|
3388 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3389 39 0.14843 3.33206 2.77050 3.22920 39 - -
|
|
|
3390 1.38629 1.38629 1.38629 1.38629
|
|
|
3391 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3392 40 3.04021 2.56430 3.09020 0.18668 40 - -
|
|
|
3393 1.38629 1.38629 1.38629 1.38629
|
|
|
3394 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3395 41 3.37748 0.13704 3.42926 2.78832 41 - -
|
|
|
3396 1.38629 1.38629 1.38629 1.38629
|
|
|
3397 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3398 42 0.14843 3.33206 2.77050 3.22920 42 - -
|
|
|
3399 1.38629 1.38629 1.38629 1.38629
|
|
|
3400 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3401 43 0.14843 3.33206 2.77050 3.22920 43 - -
|
|
|
3402 1.38629 1.38629 1.38629 1.38629
|
|
|
3403 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3404 44 2.91360 3.53861 0.12268 3.43825 44 - -
|
|
|
3405 1.38629 1.38629 1.38629 1.38629
|
|
|
3406 0.03791 3.98449 3.98449 1.46634 0.26236 1.09861 0.40547
|
|
|
3407 45 3.37748 0.13704 3.42926 2.78832 45 - -
|
|
|
3408 1.38629 1.38629 1.38629 1.38629
|
|
|
3409 0.01914 3.96571 * 1.46634 0.26236 0.00000 *
|
|
|
3410 //
|
|
|
3411 HMMER3/b [3.0 | March 2010]
|
|
|
3412 NAME 1_SSU_Amoebozoa_1_SSU_end_threeb_long
|
|
|
3413 LENG 45
|
|
|
3414 ALPH DNA
|
|
|
3415 RF no
|
|
|
3416 CS no
|
|
|
3417 MAP yes
|
|
|
3418 DATE Fri Jan 20 22:27:37 2012
|
|
|
3419 NSEQ 3
|
|
|
3420 EFFN 3.000000
|
|
|
3421 CKSUM 479671279
|
|
|
3422 STATS LOCAL MSV -7.9995 0.72030
|
|
|
3423 STATS LOCAL VITERBI -7.7571 0.72030
|
|
|
3424 STATS LOCAL FORWARD -4.0868 0.72030
|
|
|
3425 HMM A C G T
|
|
|
3426 m->m m->i m->d i->m i->i d->m d->d
|
|
|
3427 COMPO 1.33393 1.61825 1.24860 1.38068
|
|
|
3428 1.38629 1.38629 1.38629 1.38629
|
|
|
3429 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
|
|
|
3430 1 0.15719 3.27118 2.73043 3.16274 1 - -
|
|
|
3431 1.38629 1.38629 1.38629 1.38629
|
|
|
3432 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3433 2 2.86982 3.47591 0.13017 3.36931 2 - -
|
|
|
3434 1.38629 1.38629 1.38629 1.38629
|
|
|
3435 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3436 3 2.97980 2.52563 3.03204 0.19727 3 - -
|
|
|
3437 1.38629 1.38629 1.38629 1.38629
|
|
|
3438 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3439 4 3.30705 0.14631 3.36166 2.73626 4 - -
|
|
|
3440 1.38629 1.38629 1.38629 1.38629
|
|
|
3441 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3442 5 2.86982 3.47591 0.13017 3.36931 5 - -
|
|
|
3443 1.38629 1.38629 1.38629 1.38629
|
|
|
3444 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3445 6 2.97980 2.52563 3.03204 0.19727 6 - -
|
|
|
3446 1.38629 1.38629 1.38629 1.38629
|
|
|
3447 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3448 7 0.15719 3.27118 2.73043 3.16274 7 - -
|
|
|
3449 1.38629 1.38629 1.38629 1.38629
|
|
|
3450 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3451 8 0.15719 3.27118 2.73043 3.16274 8 - -
|
|
|
3452 1.38629 1.38629 1.38629 1.38629
|
|
|
3453 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3454 9 3.30705 0.14631 3.36166 2.73626 9 - -
|
|
|
3455 1.38629 1.38629 1.38629 1.38629
|
|
|
3456 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3457 10 0.15719 3.27118 2.73043 3.16274 10 - -
|
|
|
3458 1.38629 1.38629 1.38629 1.38629
|
|
|
3459 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3460 11 0.15719 3.27118 2.73043 3.16274 11 - -
|
|
|
3461 1.38629 1.38629 1.38629 1.38629
|
|
|
3462 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3463 12 2.86982 3.47591 0.13017 3.36931 12 - -
|
|
|
3464 1.38629 1.38629 1.38629 1.38629
|
|
|
3465 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3466 13 2.86982 3.47591 0.13017 3.36931 13 - -
|
|
|
3467 1.38629 1.38629 1.38629 1.38629
|
|
|
3468 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3469 14 2.97980 2.52563 3.03204 0.19727 14 - -
|
|
|
3470 1.38629 1.38629 1.38629 1.38629
|
|
|
3471 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3472 15 0.15719 3.27118 2.73043 3.16274 15 - -
|
|
|
3473 1.38629 1.38629 1.38629 1.38629
|
|
|
3474 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3475 16 2.97980 2.52563 3.03204 0.19727 16 - -
|
|
|
3476 1.38629 1.38629 1.38629 1.38629
|
|
|
3477 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3478 17 3.30705 0.14631 3.36166 2.73626 17 - -
|
|
|
3479 1.38629 1.38629 1.38629 1.38629
|
|
|
3480 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3481 18 3.30705 0.14631 3.36166 2.73626 18 - -
|
|
|
3482 1.38629 1.38629 1.38629 1.38629
|
|
|
3483 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3484 19 2.86982 3.47591 0.13017 3.36931 19 - -
|
|
|
3485 1.38629 1.38629 1.38629 1.38629
|
|
|
3486 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3487 20 2.97980 2.52563 3.03204 0.19727 20 - -
|
|
|
3488 1.38629 1.38629 1.38629 1.38629
|
|
|
3489 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3490 21 0.15719 3.27118 2.73043 3.16274 21 - -
|
|
|
3491 1.38629 1.38629 1.38629 1.38629
|
|
|
3492 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3493 22 2.86982 3.47591 0.13017 3.36931 22 - -
|
|
|
3494 1.38629 1.38629 1.38629 1.38629
|
|
|
3495 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3496 23 2.86982 3.47591 0.13017 3.36931 23 - -
|
|
|
3497 1.38629 1.38629 1.38629 1.38629
|
|
|
3498 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3499 24 2.97980 2.52563 3.03204 0.19727 24 - -
|
|
|
3500 1.38629 1.38629 1.38629 1.38629
|
|
|
3501 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3502 25 2.86982 3.47591 0.13017 3.36931 25 - -
|
|
|
3503 1.38629 1.38629 1.38629 1.38629
|
|
|
3504 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3505 26 0.15719 3.27118 2.73043 3.16274 26 - -
|
|
|
3506 1.38629 1.38629 1.38629 1.38629
|
|
|
3507 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3508 27 0.15719 3.27118 2.73043 3.16274 27 - -
|
|
|
3509 1.38629 1.38629 1.38629 1.38629
|
|
|
3510 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3511 28 3.30705 0.14631 3.36166 2.73626 28 - -
|
|
|
3512 1.38629 1.38629 1.38629 1.38629
|
|
|
3513 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3514 29 3.30705 0.14631 3.36166 2.73626 29 - -
|
|
|
3515 1.38629 1.38629 1.38629 1.38629
|
|
|
3516 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3517 30 2.97980 2.52563 3.03204 0.19727 30 - -
|
|
|
3518 1.38629 1.38629 1.38629 1.38629
|
|
|
3519 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3520 31 2.86982 3.47591 0.13017 3.36931 31 - -
|
|
|
3521 1.38629 1.38629 1.38629 1.38629
|
|
|
3522 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3523 32 3.30705 0.14631 3.36166 2.73626 32 - -
|
|
|
3524 1.38629 1.38629 1.38629 1.38629
|
|
|
3525 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3526 33 2.86982 3.47591 0.13017 3.36931 33 - -
|
|
|
3527 1.38629 1.38629 1.38629 1.38629
|
|
|
3528 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3529 34 2.86982 3.47591 0.13017 3.36931 34 - -
|
|
|
3530 1.38629 1.38629 1.38629 1.38629
|
|
|
3531 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3532 35 0.15719 3.27118 2.73043 3.16274 35 - -
|
|
|
3533 1.38629 1.38629 1.38629 1.38629
|
|
|
3534 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3535 36 2.97980 2.52563 3.03204 0.19727 36 - -
|
|
|
3536 1.38629 1.38629 1.38629 1.38629
|
|
|
3537 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3538 37 2.86982 3.47591 0.13017 3.36931 37 - -
|
|
|
3539 1.38629 1.38629 1.38629 1.38629
|
|
|
3540 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3541 38 2.86982 3.47591 0.13017 3.36931 38 - -
|
|
|
3542 1.38629 1.38629 1.38629 1.38629
|
|
|
3543 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3544 39 0.15719 3.27118 2.73043 3.16274 39 - -
|
|
|
3545 1.38629 1.38629 1.38629 1.38629
|
|
|
3546 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3547 40 2.97980 2.52563 3.03204 0.19727 40 - -
|
|
|
3548 1.38629 1.38629 1.38629 1.38629
|
|
|
3549 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3550 41 3.30705 0.14631 3.36166 2.73626 41 - -
|
|
|
3551 1.38629 1.38629 1.38629 1.38629
|
|
|
3552 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3553 42 0.15719 3.27118 2.73043 3.16274 42 - -
|
|
|
3554 1.38629 1.38629 1.38629 1.38629
|
|
|
3555 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3556 43 2.97980 2.52563 3.03204 0.19727 43 - -
|
|
|
3557 1.38629 1.38629 1.38629 1.38629
|
|
|
3558 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3559 44 2.97980 2.52563 3.03204 0.19727 44 - -
|
|
|
3560 1.38629 1.38629 1.38629 1.38629
|
|
|
3561 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
|
|
|
3562 45 2.97980 2.52563 3.03204 0.19727 45 - -
|
|
|
3563 1.38629 1.38629 1.38629 1.38629
|
|
|
3564 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
|
|
|
3565 //
|
|
|
3566 HMMER3/b [3.0 | March 2010]
|
|
|
3567 NAME 1_SSU_Amoebozoa_1_SSU_end_threec_long
|
|
|
3568 LENG 45
|
|
|
3569 ALPH DNA
|
|
|
3570 RF no
|
|
|
3571 CS no
|
|
|
3572 MAP yes
|
|
|
3573 DATE Fri Jan 20 22:27:43 2012
|
|
|
3574 NSEQ 5
|
|
|
3575 EFFN 3.247070
|
|
|
3576 CKSUM 3545515269
|
|
|
3577 STATS LOCAL MSV -8.0553 0.71931
|
|
|
3578 STATS LOCAL VITERBI -7.6960 0.71931
|
|
|
3579 STATS LOCAL FORWARD -4.1589 0.71931
|
|
|
3580 HMM A C G T
|
|
|
3581 m->m m->i m->d i->m i->i d->m d->d
|
|
|
3582 COMPO 1.33344 1.62254 1.24775 1.37878
|
|
|
3583 1.38629 1.38629 1.38629 1.38629
|
|
|
3584 0.03741 3.99766 3.99766 1.46634 0.26236 0.00000 *
|
|
|
3585 1 0.14518 3.35575 2.78597 3.25510 1 - -
|
|
|
3586 1.38629 1.38629 1.38629 1.38629
|
|
|
3587 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3588 2 2.93035 3.56282 0.11992 3.46492 2 - -
|
|
|
3589 1.38629 1.38629 1.38629 1.38629
|
|
|
3590 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3591 3 3.06393 2.57943 3.11303 0.18271 3 - -
|
|
|
3592 1.38629 1.38629 1.38629 1.38629
|
|
|
3593 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3594 4 3.40484 0.13363 3.45549 2.80837 4 - -
|
|
|
3595 1.38629 1.38629 1.38629 1.38629
|
|
|
3596 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3597 5 2.93035 3.56282 0.11992 3.46492 5 - -
|
|
|
3598 1.38629 1.38629 1.38629 1.38629
|
|
|
3599 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3600 6 3.06393 2.57943 3.11303 0.18271 6 - -
|
|
|
3601 1.38629 1.38629 1.38629 1.38629
|
|
|
3602 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3603 7 0.14518 3.35575 2.78597 3.25510 7 - -
|
|
|
3604 1.38629 1.38629 1.38629 1.38629
|
|
|
3605 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3606 8 0.14518 3.35575 2.78597 3.25510 8 - -
|
|
|
3607 1.38629 1.38629 1.38629 1.38629
|
|
|
3608 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3609 9 3.40484 0.13363 3.45549 2.80837 9 - -
|
|
|
3610 1.38629 1.38629 1.38629 1.38629
|
|
|
3611 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3612 10 0.14518 3.35575 2.78597 3.25510 10 - -
|
|
|
3613 1.38629 1.38629 1.38629 1.38629
|
|
|
3614 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3615 11 0.14518 3.35575 2.78597 3.25510 11 - -
|
|
|
3616 1.38629 1.38629 1.38629 1.38629
|
|
|
3617 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3618 12 2.93035 3.56282 0.11992 3.46492 12 - -
|
|
|
3619 1.38629 1.38629 1.38629 1.38629
|
|
|
3620 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3621 13 2.93035 3.56282 0.11992 3.46492 13 - -
|
|
|
3622 1.38629 1.38629 1.38629 1.38629
|
|
|
3623 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3624 14 3.06393 2.57943 3.11303 0.18271 14 - -
|
|
|
3625 1.38629 1.38629 1.38629 1.38629
|
|
|
3626 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3627 15 0.14518 3.35575 2.78597 3.25510 15 - -
|
|
|
3628 1.38629 1.38629 1.38629 1.38629
|
|
|
3629 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3630 16 3.06393 2.57943 3.11303 0.18271 16 - -
|
|
|
3631 1.38629 1.38629 1.38629 1.38629
|
|
|
3632 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3633 17 3.40484 0.13363 3.45549 2.80837 17 - -
|
|
|
3634 1.38629 1.38629 1.38629 1.38629
|
|
|
3635 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3636 18 3.40484 0.13363 3.45549 2.80837 18 - -
|
|
|
3637 1.38629 1.38629 1.38629 1.38629
|
|
|
3638 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3639 19 2.93035 3.56282 0.11992 3.46492 19 - -
|
|
|
3640 1.38629 1.38629 1.38629 1.38629
|
|
|
3641 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3642 20 3.06393 2.57943 3.11303 0.18271 20 - -
|
|
|
3643 1.38629 1.38629 1.38629 1.38629
|
|
|
3644 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3645 21 0.14518 3.35575 2.78597 3.25510 21 - -
|
|
|
3646 1.38629 1.38629 1.38629 1.38629
|
|
|
3647 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3648 22 2.93035 3.56282 0.11992 3.46492 22 - -
|
|
|
3649 1.38629 1.38629 1.38629 1.38629
|
|
|
3650 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3651 23 2.93035 3.56282 0.11992 3.46492 23 - -
|
|
|
3652 1.38629 1.38629 1.38629 1.38629
|
|
|
3653 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3654 24 3.06393 2.57943 3.11303 0.18271 24 - -
|
|
|
3655 1.38629 1.38629 1.38629 1.38629
|
|
|
3656 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3657 25 2.93035 3.56282 0.11992 3.46492 25 - -
|
|
|
3658 1.38629 1.38629 1.38629 1.38629
|
|
|
3659 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3660 26 0.14518 3.35575 2.78597 3.25510 26 - -
|
|
|
3661 1.38629 1.38629 1.38629 1.38629
|
|
|
3662 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3663 27 0.14518 3.35575 2.78597 3.25510 27 - -
|
|
|
3664 1.38629 1.38629 1.38629 1.38629
|
|
|
3665 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3666 28 3.40484 0.13363 3.45549 2.80837 28 - -
|
|
|
3667 1.38629 1.38629 1.38629 1.38629
|
|
|
3668 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3669 29 3.40484 0.13363 3.45549 2.80837 29 - -
|
|
|
3670 1.38629 1.38629 1.38629 1.38629
|
|
|
3671 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3672 30 3.06393 2.57943 3.11303 0.18271 30 - -
|
|
|
3673 1.38629 1.38629 1.38629 1.38629
|
|
|
3674 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3675 31 2.93035 3.56282 0.11992 3.46492 31 - -
|
|
|
3676 1.38629 1.38629 1.38629 1.38629
|
|
|
3677 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3678 32 3.40484 0.13363 3.45549 2.80837 32 - -
|
|
|
3679 1.38629 1.38629 1.38629 1.38629
|
|
|
3680 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3681 33 2.93035 3.56282 0.11992 3.46492 33 - -
|
|
|
3682 1.38629 1.38629 1.38629 1.38629
|
|
|
3683 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3684 34 2.93035 3.56282 0.11992 3.46492 34 - -
|
|
|
3685 1.38629 1.38629 1.38629 1.38629
|
|
|
3686 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3687 35 0.14518 3.35575 2.78597 3.25510 35 - -
|
|
|
3688 1.38629 1.38629 1.38629 1.38629
|
|
|
3689 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3690 36 3.06393 2.57943 3.11303 0.18271 36 - -
|
|
|
3691 1.38629 1.38629 1.38629 1.38629
|
|
|
3692 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3693 37 2.93035 3.56282 0.11992 3.46492 37 - -
|
|
|
3694 1.38629 1.38629 1.38629 1.38629
|
|
|
3695 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3696 38 2.93035 3.56282 0.11992 3.46492 38 - -
|
|
|
3697 1.38629 1.38629 1.38629 1.38629
|
|
|
3698 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3699 39 0.14518 3.35575 2.78597 3.25510 39 - -
|
|
|
3700 1.38629 1.38629 1.38629 1.38629
|
|
|
3701 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3702 40 3.06393 2.57943 3.11303 0.18271 40 - -
|
|
|
3703 1.38629 1.38629 1.38629 1.38629
|
|
|
3704 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3705 41 3.40484 0.13363 3.45549 2.80837 41 - -
|
|
|
3706 1.38629 1.38629 1.38629 1.38629
|
|
|
3707 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3708 42 0.14518 3.35575 2.78597 3.25510 42 - -
|
|
|
3709 1.38629 1.38629 1.38629 1.38629
|
|
|
3710 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3711 43 3.06393 2.57943 3.11303 0.18271 43 - -
|
|
|
3712 1.38629 1.38629 1.38629 1.38629
|
|
|
3713 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3714 44 3.06393 2.57943 3.11303 0.18271 44 - -
|
|
|
3715 1.38629 1.38629 1.38629 1.38629
|
|
|
3716 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
|
|
|
3717 45 3.06393 2.57943 3.11303 0.18271 45 - -
|
|
|
3718 1.38629 1.38629 1.38629 1.38629
|
|
|
3719 0.01888 3.97913 * 1.46634 0.26236 0.00000 *
|
|
|
3720 //
|
|
|
3721 HMMER3/b [3.0 | March 2010]
|
|
|
3722 NAME 1_SSU_Amoebozoa_1_SSU_end_two_long
|
|
|
3723 LENG 45
|
|
|
3724 ALPH DNA
|
|
|
3725 RF no
|
|
|
3726 CS no
|
|
|
3727 MAP yes
|
|
|
3728 DATE Fri Jan 20 22:27:08 2012
|
|
|
3729 NSEQ 71
|
|
|
3730 EFFN 3.375793
|
|
|
3731 CKSUM 1469632365
|
|
|
3732 STATS LOCAL MSV -7.4121 0.71932
|
|
|
3733 STATS LOCAL VITERBI -7.6514 0.71932
|
|
|
3734 STATS LOCAL FORWARD -4.1516 0.71932
|
|
|
3735 HMM A C G T
|
|
|
3736 m->m m->i m->d i->m i->i d->m d->d
|
|
|
3737 COMPO 1.32611 1.62738 1.24904 1.38123
|
|
|
3738 1.38629 1.38629 1.38629 1.38629
|
|
|
3739 0.03653 4.02102 4.02102 1.46634 0.26236 0.00000 *
|
|
|
3740 1 0.13969 3.39712 2.81286 3.30038 1 - -
|
|
|
3741 1.38629 1.38629 1.38629 1.38629
|
|
|
3742 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3743 2 2.95925 3.60483 0.11531 3.51128 2 - -
|
|
|
3744 1.38629 1.38629 1.38629 1.38629
|
|
|
3745 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3746 3 3.10566 2.60598 3.15316 0.17595 3 - -
|
|
|
3747 1.38629 1.38629 1.38629 1.38629
|
|
|
3748 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3749 4 3.45252 0.12792 3.50115 2.84311 4 - -
|
|
|
3750 1.38629 1.38629 1.38629 1.38629
|
|
|
3751 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3752 5 2.95925 3.60483 0.11531 3.51128 5 - -
|
|
|
3753 1.38629 1.38629 1.38629 1.38629
|
|
|
3754 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3755 6 3.10566 2.60598 3.15316 0.17595 6 - -
|
|
|
3756 1.38629 1.38629 1.38629 1.38629
|
|
|
3757 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3758 7 0.13969 3.39712 2.81286 3.30038 7 - -
|
|
|
3759 1.38629 1.38629 1.38629 1.38629
|
|
|
3760 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3761 8 0.13969 3.39712 2.81286 3.30038 8 - -
|
|
|
3762 1.38629 1.38629 1.38629 1.38629
|
|
|
3763 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3764 9 3.45252 0.12792 3.50115 2.84311 9 - -
|
|
|
3765 1.38629 1.38629 1.38629 1.38629
|
|
|
3766 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3767 10 0.13969 3.39712 2.81286 3.30038 10 - -
|
|
|
3768 1.38629 1.38629 1.38629 1.38629
|
|
|
3769 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3770 11 0.13969 3.39712 2.81286 3.30038 11 - -
|
|
|
3771 1.38629 1.38629 1.38629 1.38629
|
|
|
3772 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3773 12 2.95925 3.60483 0.11531 3.51128 12 - -
|
|
|
3774 1.38629 1.38629 1.38629 1.38629
|
|
|
3775 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3776 13 2.95925 3.60483 0.11531 3.51128 13 - -
|
|
|
3777 1.38629 1.38629 1.38629 1.38629
|
|
|
3778 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3779 14 3.10566 2.60598 3.15316 0.17595 14 - -
|
|
|
3780 1.38629 1.38629 1.38629 1.38629
|
|
|
3781 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3782 15 0.13969 3.39712 2.81286 3.30038 15 - -
|
|
|
3783 1.38629 1.38629 1.38629 1.38629
|
|
|
3784 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3785 16 3.10566 2.60598 3.15316 0.17595 16 - -
|
|
|
3786 1.38629 1.38629 1.38629 1.38629
|
|
|
3787 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3788 17 3.45252 0.12792 3.50115 2.84311 17 - -
|
|
|
3789 1.38629 1.38629 1.38629 1.38629
|
|
|
3790 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3791 18 2.95186 0.22451 2.63110 2.56592 18 - -
|
|
|
3792 1.38629 1.38629 1.38629 1.38629
|
|
|
3793 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3794 19 2.95925 3.60483 0.11531 3.51128 19 - -
|
|
|
3795 1.38629 1.38629 1.38629 1.38629
|
|
|
3796 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3797 20 3.10566 2.60598 3.15316 0.17595 20 - -
|
|
|
3798 1.38629 1.38629 1.38629 1.38629
|
|
|
3799 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3800 21 0.13969 3.39712 2.81286 3.30038 21 - -
|
|
|
3801 1.38629 1.38629 1.38629 1.38629
|
|
|
3802 0.05378 4.02102 3.36902 1.46634 0.26236 1.09861 0.40547
|
|
|
3803 22 2.93878 3.57505 0.11856 3.47840 22 - -
|
|
|
3804 1.38629 1.38629 1.38629 1.38629
|
|
|
3805 0.03715 4.00439 4.00439 1.46634 0.26236 0.71393 0.67279
|
|
|
3806 23 2.95925 3.60483 0.11531 3.51128 23 - -
|
|
|
3807 1.38629 1.38629 1.38629 1.38629
|
|
|
3808 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3809 24 3.10566 2.60598 3.15316 0.17595 24 - -
|
|
|
3810 1.38629 1.38629 1.38629 1.38629
|
|
|
3811 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3812 25 2.95925 3.60483 0.11531 3.51128 25 - -
|
|
|
3813 1.38629 1.38629 1.38629 1.38629
|
|
|
3814 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3815 26 0.13969 3.39712 2.81286 3.30038 26 - -
|
|
|
3816 1.38629 1.38629 1.38629 1.38629
|
|
|
3817 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3818 27 0.13969 3.39712 2.81286 3.30038 27 - -
|
|
|
3819 1.38629 1.38629 1.38629 1.38629
|
|
|
3820 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3821 28 3.45252 0.12792 3.50115 2.84311 28 - -
|
|
|
3822 1.38629 1.38629 1.38629 1.38629
|
|
|
3823 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3824 29 3.45252 0.12792 3.50115 2.84311 29 - -
|
|
|
3825 1.38629 1.38629 1.38629 1.38629
|
|
|
3826 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3827 30 3.10566 2.60598 3.15316 0.17595 30 - -
|
|
|
3828 1.38629 1.38629 1.38629 1.38629
|
|
|
3829 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3830 31 2.95925 3.60483 0.11531 3.51128 31 - -
|
|
|
3831 1.38629 1.38629 1.38629 1.38629
|
|
|
3832 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3833 32 3.45252 0.12792 3.50115 2.84311 32 - -
|
|
|
3834 1.38629 1.38629 1.38629 1.38629
|
|
|
3835 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3836 33 2.71968 2.72902 0.19871 3.01523 33 - -
|
|
|
3837 1.38629 1.38629 1.38629 1.38629
|
|
|
3838 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3839 34 2.95925 3.60483 0.11531 3.51128 34 - -
|
|
|
3840 1.38629 1.38629 1.38629 1.38629
|
|
|
3841 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3842 35 0.13969 3.39712 2.81286 3.30038 35 - -
|
|
|
3843 1.38629 1.38629 1.38629 1.38629
|
|
|
3844 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3845 36 3.10566 2.60598 3.15316 0.17595 36 - -
|
|
|
3846 1.38629 1.38629 1.38629 1.38629
|
|
|
3847 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3848 37 2.95925 3.60483 0.11531 3.51128 37 - -
|
|
|
3849 1.38629 1.38629 1.38629 1.38629
|
|
|
3850 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3851 38 2.95925 3.60483 0.11531 3.51128 38 - -
|
|
|
3852 1.38629 1.38629 1.38629 1.38629
|
|
|
3853 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3854 39 0.13969 3.39712 2.81286 3.30038 39 - -
|
|
|
3855 1.38629 1.38629 1.38629 1.38629
|
|
|
3856 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3857 40 3.10566 2.60598 3.15316 0.17595 40 - -
|
|
|
3858 1.38629 1.38629 1.38629 1.38629
|
|
|
3859 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3860 41 3.45252 0.12792 3.50115 2.84311 41 - -
|
|
|
3861 1.38629 1.38629 1.38629 1.38629
|
|
|
3862 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3863 42 0.13969 3.39712 2.81286 3.30038 42 - -
|
|
|
3864 1.38629 1.38629 1.38629 1.38629
|
|
|
3865 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3866 43 3.10566 2.60598 3.15316 0.17595 43 - -
|
|
|
3867 1.38629 1.38629 1.38629 1.38629
|
|
|
3868 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3869 44 3.10566 2.60598 3.15316 0.17595 44 - -
|
|
|
3870 1.38629 1.38629 1.38629 1.38629
|
|
|
3871 0.03653 4.02102 4.02102 1.46634 0.26236 1.09861 0.40547
|
|
|
3872 45 2.33315 2.44141 2.77551 0.28282 45 - -
|
|
|
3873 1.38629 1.38629 1.38629 1.38629
|
|
|
3874 0.01843 4.00292 * 1.46634 0.26236 0.00000 *
|
|
|
3875 //
|
