0
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1 HMMER3/b [3.0 | March 2010]
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2 NAME 3_End_Haptophyceae_58S_end_five_long
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3 LENG 45
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4 ALPH DNA
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5 RF no
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6 CS no
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7 MAP yes
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8 DATE Thu Jan 19 21:11:03 2012
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9 NSEQ 2
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10 EFFN 2.000000
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11 CKSUM 2494581836
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12 STATS LOCAL MSV -7.5772 0.72779
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13 STATS LOCAL VITERBI -8.4466 0.72779
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14 STATS LOCAL FORWARD -3.4217 0.72779
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15 HMM A C G T
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16 m->m m->i m->d i->m i->i d->m d->d
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17 COMPO 1.83092 1.23370 1.22080 1.37229
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18 1.38629 1.38629 1.38629 1.38629
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19 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
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20 1 2.81865 0.23582 2.88868 2.35662 1 - -
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21 1.38629 1.38629 1.38629 1.38629
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22 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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23 2 2.53331 3.02441 0.20344 2.88069 2 - -
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24 1.38629 1.38629 1.38629 1.38629
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25 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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26 3 2.81865 0.23582 2.88868 2.35662 3 - -
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|
27 1.38629 1.38629 1.38629 1.38629
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|
28 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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29 4 2.57915 2.25909 2.64442 0.28946 4 - -
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30 1.38629 1.38629 1.38629 1.38629
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|
31 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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32 5 2.57915 2.25909 2.64442 0.28946 5 - -
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33 1.38629 1.38629 1.38629 1.38629
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|
34 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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35 6 2.57915 2.25909 2.64442 0.28946 6 - -
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36 1.38629 1.38629 1.38629 1.38629
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37 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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38 7 2.53331 3.02441 0.20344 2.88069 7 - -
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|
39 1.38629 1.38629 1.38629 1.38629
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|
40 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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|
41 8 2.57915 2.25909 2.64442 0.28946 8 - -
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|
42 1.38629 1.38629 1.38629 1.38629
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|
43 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
44 9 2.53331 3.02441 0.20344 2.88069 9 - -
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|
45 1.38629 1.38629 1.38629 1.38629
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|
46 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
47 10 2.53331 3.02441 0.20344 2.88069 10 - -
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|
48 1.38629 1.38629 1.38629 1.38629
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|
49 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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|
50 11 2.81865 0.23582 2.88868 2.35662 11 - -
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|
51 1.38629 1.38629 1.38629 1.38629
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|
52 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
53 12 2.57915 2.25909 2.64442 0.28946 12 - -
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|
54 1.38629 1.38629 1.38629 1.38629
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|
55 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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|
56 13 2.81865 0.23582 2.88868 2.35662 13 - -
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|
57 1.38629 1.38629 1.38629 1.38629
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|
58 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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|
59 14 2.81865 0.23582 2.88868 2.35662 14 - -
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|
60 1.38629 1.38629 1.38629 1.38629
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|
61 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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|
62 15 2.53331 3.02441 0.20344 2.88069 15 - -
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|
63 1.38629 1.38629 1.38629 1.38629
|
|
64 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
65 16 2.81865 0.23582 2.88868 2.35662 16 - -
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|
66 1.38629 1.38629 1.38629 1.38629
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|
67 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
68 17 2.81865 0.23582 2.88868 2.35662 17 - -
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|
69 1.38629 1.38629 1.38629 1.38629
|
|
70 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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|
71 18 2.53331 3.02441 0.20344 2.88069 18 - -
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|
72 1.38629 1.38629 1.38629 1.38629
|
|
73 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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|
74 19 2.81865 0.23582 2.88868 2.35662 19 - -
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|
75 1.38629 1.38629 1.38629 1.38629
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|
76 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
77 20 2.53331 3.02441 0.20344 2.88069 20 - -
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|
78 1.38629 1.38629 1.38629 1.38629
|
|
79 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
80 21 0.23862 2.84929 2.43386 2.70756 21 - -
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|
81 1.38629 1.38629 1.38629 1.38629
|
|
82 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
83 22 0.23862 2.84929 2.43386 2.70756 22 - -
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|
84 1.38629 1.38629 1.38629 1.38629
|
|
85 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
86 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
87 1.38629 1.38629 1.38629 1.38629
|
|
88 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
89 24 2.81865 0.23582 2.88868 2.35662 24 - -
|
|
90 1.38629 1.38629 1.38629 1.38629
|
|
91 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
92 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
93 1.38629 1.38629 1.38629 1.38629
|
|
94 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
95 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
96 1.38629 1.38629 1.38629 1.38629
|
|
97 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
98 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
99 1.38629 1.38629 1.38629 1.38629
|
|
100 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
101 28 2.57915 2.25909 2.64442 0.28946 28 - -
|
|
102 1.38629 1.38629 1.38629 1.38629
|
|
103 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
104 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
105 1.38629 1.38629 1.38629 1.38629
|
|
106 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
107 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
108 1.38629 1.38629 1.38629 1.38629
|
|
109 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
110 31 2.81865 0.23582 2.88868 2.35662 31 - -
|
|
111 1.38629 1.38629 1.38629 1.38629
|
|
112 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
113 32 2.57915 2.25909 2.64442 0.28946 32 - -
|
|
114 1.38629 1.38629 1.38629 1.38629
|
|
115 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
116 33 2.57915 2.25909 2.64442 0.28946 33 - -
|
|
117 1.38629 1.38629 1.38629 1.38629
|
|
118 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
119 34 2.81865 0.23582 2.88868 2.35662 34 - -
|
|
120 1.38629 1.38629 1.38629 1.38629
|
|
121 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
122 35 2.53331 3.02441 0.20344 2.88069 35 - -
|
|
123 1.38629 1.38629 1.38629 1.38629
|
|
124 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
125 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
126 1.38629 1.38629 1.38629 1.38629
|
|
127 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
128 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
129 1.38629 1.38629 1.38629 1.38629
|
|
130 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
131 38 2.57915 2.25909 2.64442 0.28946 38 - -
|
|
132 1.38629 1.38629 1.38629 1.38629
|
|
133 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
134 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
135 1.38629 1.38629 1.38629 1.38629
|
|
136 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
137 40 2.53331 3.02441 0.20344 2.88069 40 - -
|
|
138 1.38629 1.38629 1.38629 1.38629
|
|
139 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
140 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
141 1.38629 1.38629 1.38629 1.38629
|
|
142 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
143 42 2.53331 3.02441 0.20344 2.88069 42 - -
|
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144 1.38629 1.38629 1.38629 1.38629
|
|
145 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
146 43 2.57915 2.25909 2.64442 0.28946 43 - -
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147 1.38629 1.38629 1.38629 1.38629
|
|
148 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
149 44 2.81865 0.23582 2.88868 2.35662 44 - -
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150 1.38629 1.38629 1.38629 1.38629
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|
151 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
152 45 0.23862 2.84929 2.43386 2.70756 45 - -
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153 1.38629 1.38629 1.38629 1.38629
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|
154 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
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155 //
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156 HMMER3/b [3.0 | March 2010]
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157 NAME 3_End_Haptophyceae_58S_end_four_long
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158 LENG 45
|
|
159 ALPH DNA
|
|
160 RF no
|
|
161 CS no
|
|
162 MAP yes
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163 DATE Thu Jan 19 21:10:55 2012
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164 NSEQ 2
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165 EFFN 2.000000
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166 CKSUM 1644174705
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167 STATS LOCAL MSV -7.4746 0.72790
|
|
168 STATS LOCAL VITERBI -8.3271 0.72790
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169 STATS LOCAL FORWARD -3.4806 0.72790
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170 HMM A C G T
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171 m->m m->i m->d i->m i->i d->m d->d
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172 COMPO 1.82891 1.28195 1.21975 1.32197
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173 1.38629 1.38629 1.38629 1.38629
|
|
174 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
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|
175 1 2.81865 0.23582 2.88868 2.35662 1 - -
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176 1.38629 1.38629 1.38629 1.38629
|
|
177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
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178 2 2.53331 3.02441 0.20344 2.88069 2 - -
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|
179 1.38629 1.38629 1.38629 1.38629
|
|
180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
181 3 2.81865 0.23582 2.88868 2.35662 3 - -
|
|
182 1.38629 1.38629 1.38629 1.38629
|
|
183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
184 4 2.57915 2.25909 2.64442 0.28946 4 - -
|
|
185 1.38629 1.38629 1.38629 1.38629
|
|
186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
187 5 2.57915 2.25909 2.64442 0.28946 5 - -
|
|
188 1.38629 1.38629 1.38629 1.38629
|
|
189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
190 6 2.57915 2.25909 2.64442 0.28946 6 - -
|
|
191 1.38629 1.38629 1.38629 1.38629
|
|
192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
193 7 2.53331 3.02441 0.20344 2.88069 7 - -
|
|
194 1.38629 1.38629 1.38629 1.38629
|
|
195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
196 8 2.81865 0.23582 2.88868 2.35662 8 - -
|
|
197 1.38629 1.38629 1.38629 1.38629
|
|
198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
199 9 2.53331 3.02441 0.20344 2.88069 9 - -
|
|
200 1.38629 1.38629 1.38629 1.38629
|
|
201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
202 10 2.53331 3.02441 0.20344 2.88069 10 - -
|
|
203 1.38629 1.38629 1.38629 1.38629
|
|
204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
205 11 2.57915 2.25909 2.64442 0.28946 11 - -
|
|
206 1.38629 1.38629 1.38629 1.38629
|
|
207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
208 12 2.57915 2.25909 2.64442 0.28946 12 - -
|
|
209 1.38629 1.38629 1.38629 1.38629
|
|
210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
211 13 2.81865 0.23582 2.88868 2.35662 13 - -
|
|
212 1.38629 1.38629 1.38629 1.38629
|
|
213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
214 14 2.81865 0.23582 2.88868 2.35662 14 - -
|
|
215 1.38629 1.38629 1.38629 1.38629
|
|
216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
217 15 2.53331 3.02441 0.20344 2.88069 15 - -
|
|
218 1.38629 1.38629 1.38629 1.38629
|
|
219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
220 16 2.81865 0.23582 2.88868 2.35662 16 - -
|
|
221 1.38629 1.38629 1.38629 1.38629
|
|
222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
223 17 2.81865 0.23582 2.88868 2.35662 17 - -
|
|
224 1.38629 1.38629 1.38629 1.38629
|
|
225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
226 18 2.53331 3.02441 0.20344 2.88069 18 - -
|
|
227 1.38629 1.38629 1.38629 1.38629
|
|
228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
229 19 2.81865 0.23582 2.88868 2.35662 19 - -
|
|
230 1.38629 1.38629 1.38629 1.38629
|
|
231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
232 20 2.53331 3.02441 0.20344 2.88069 20 - -
|
|
233 1.38629 1.38629 1.38629 1.38629
|
|
234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
235 21 0.23862 2.84929 2.43386 2.70756 21 - -
|
|
236 1.38629 1.38629 1.38629 1.38629
|
|
237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
238 22 0.23862 2.84929 2.43386 2.70756 22 - -
|
|
239 1.38629 1.38629 1.38629 1.38629
|
|
240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
241 23 2.53331 3.02441 0.20344 2.88069 23 - -
|
|
242 1.38629 1.38629 1.38629 1.38629
|
|
243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
244 24 2.57915 2.25909 2.64442 0.28946 24 - -
|
|
245 1.38629 1.38629 1.38629 1.38629
|
|
246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
247 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
248 1.38629 1.38629 1.38629 1.38629
|
|
249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
250 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
251 1.38629 1.38629 1.38629 1.38629
|
|
252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
253 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
254 1.38629 1.38629 1.38629 1.38629
|
|
255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
256 28 2.57915 2.25909 2.64442 0.28946 28 - -
|
|
257 1.38629 1.38629 1.38629 1.38629
|
|
258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
259 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
260 1.38629 1.38629 1.38629 1.38629
|
|
261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
262 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
263 1.38629 1.38629 1.38629 1.38629
|
|
264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
265 31 2.81865 0.23582 2.88868 2.35662 31 - -
|
|
266 1.38629 1.38629 1.38629 1.38629
|
|
267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
268 32 2.57915 2.25909 2.64442 0.28946 32 - -
|
|
269 1.38629 1.38629 1.38629 1.38629
|
|
270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
271 33 2.57915 2.25909 2.64442 0.28946 33 - -
|
|
272 1.38629 1.38629 1.38629 1.38629
|
|
273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
274 34 2.81865 0.23582 2.88868 2.35662 34 - -
|
|
275 1.38629 1.38629 1.38629 1.38629
|
|
276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
277 35 2.53331 3.02441 0.20344 2.88069 35 - -
|
|
278 1.38629 1.38629 1.38629 1.38629
|
|
279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
280 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
281 1.38629 1.38629 1.38629 1.38629
|
|
282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
283 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
284 1.38629 1.38629 1.38629 1.38629
|
|
285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
286 38 2.57915 2.25909 2.64442 0.28946 38 - -
|
|
287 1.38629 1.38629 1.38629 1.38629
|
|
288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
289 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
290 1.38629 1.38629 1.38629 1.38629
|
|
291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
292 40 2.53331 3.02441 0.20344 2.88069 40 - -
|
|
293 1.38629 1.38629 1.38629 1.38629
|
|
294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
295 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
296 1.38629 1.38629 1.38629 1.38629
|
|
297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
298 42 2.53331 3.02441 0.20344 2.88069 42 - -
|
|
299 1.38629 1.38629 1.38629 1.38629
|
|
300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
301 43 2.57915 2.25909 2.64442 0.28946 43 - -
|
|
302 1.38629 1.38629 1.38629 1.38629
|
|
303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
304 44 2.81865 0.23582 2.88868 2.35662 44 - -
|
|
305 1.38629 1.38629 1.38629 1.38629
|
|
306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
307 45 0.23862 2.84929 2.43386 2.70756 45 - -
|
|
308 1.38629 1.38629 1.38629 1.38629
|
|
309 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
310 //
|
|
311 HMMER3/b [3.0 | March 2010]
|
|
312 NAME 3_End_Haptophyceae_58S_end_one_long
|
|
313 LENG 45
|
|
314 ALPH DNA
|
|
315 RF no
|
|
316 CS no
|
|
317 MAP yes
|
|
318 DATE Thu Jan 19 21:10:31 2012
|
|
319 NSEQ 17
|
|
320 EFFN 3.357666
|
|
321 CKSUM 4226331182
|
|
322 STATS LOCAL MSV -8.1825 0.71932
|
|
323 STATS LOCAL VITERBI -7.8281 0.71932
|
|
324 STATS LOCAL FORWARD -4.1005 0.71932
|
|
325 HMM A C G T
|
|
326 m->m m->i m->d i->m i->i d->m d->d
|
|
327 COMPO 1.63377 1.51987 1.38406 1.09211
|
|
328 1.38629 1.38629 1.38629 1.38629
|
|
329 0.07416 4.01776 2.92835 1.46634 0.26236 0.00000 *
|
|
330 1 3.37150 0.13780 3.42352 2.78392 1 - -
|
|
331 1.38629 1.38629 1.38629 1.38629
|
|
332 0.03802 3.98163 3.98163 1.46634 0.26236 0.51452 0.91078
|
|
333 2 0.14043 3.39140 2.80915 3.29412 2 - -
|
|
334 1.38629 1.38629 1.38629 1.38629
|
|
335 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
336 3 3.09986 2.60230 3.14759 0.17687 3 - -
|
|
337 1.38629 1.38629 1.38629 1.38629
|
|
338 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
339 4 3.09986 2.60230 3.14759 0.17687 4 - -
|
|
340 1.38629 1.38629 1.38629 1.38629
|
|
341 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
342 5 3.09986 2.60230 3.14759 0.17687 5 - -
|
|
343 1.38629 1.38629 1.38629 1.38629
|
|
344 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
345 6 3.44594 0.12869 3.49485 2.83833 6 - -
|
|
346 1.38629 1.38629 1.38629 1.38629
|
|
347 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
348 7 3.44594 0.12869 3.49485 2.83833 7 - -
|
|
349 1.38629 1.38629 1.38629 1.38629
|
|
350 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
351 8 0.14043 3.39140 2.80915 3.29412 8 - -
|
|
352 1.38629 1.38629 1.38629 1.38629
|
|
353 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
354 9 0.14043 3.39140 2.80915 3.29412 9 - -
|
|
355 1.38629 1.38629 1.38629 1.38629
|
|
356 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
357 10 2.95528 3.59904 0.11593 3.50489 10 - -
|
|
358 1.38629 1.38629 1.38629 1.38629
|
|
359 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
360 11 3.09986 2.60230 3.14759 0.17687 11 - -
|
|
361 1.38629 1.38629 1.38629 1.38629
|
|
362 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
363 12 3.09986 2.60230 3.14759 0.17687 12 - -
|
|
364 1.38629 1.38629 1.38629 1.38629
|
|
365 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
366 13 3.09986 2.60230 3.14759 0.17687 13 - -
|
|
367 1.38629 1.38629 1.38629 1.38629
|
|
368 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
369 14 3.44594 0.12869 3.49485 2.83833 14 - -
|
|
370 1.38629 1.38629 1.38629 1.38629
|
|
371 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
372 15 2.95528 3.59904 0.11593 3.50489 15 - -
|
|
373 1.38629 1.38629 1.38629 1.38629
|
|
374 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
375 16 3.44594 0.12869 3.49485 2.83833 16 - -
|
|
376 1.38629 1.38629 1.38629 1.38629
|
|
377 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
378 17 3.09986 2.60230 3.14759 0.17687 17 - -
|
|
379 1.38629 1.38629 1.38629 1.38629
|
|
380 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
381 18 3.09986 2.60230 3.14759 0.17687 18 - -
|
|
382 1.38629 1.38629 1.38629 1.38629
|
|
383 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
384 19 2.95528 3.59904 0.11593 3.50489 19 - -
|
|
385 1.38629 1.38629 1.38629 1.38629
|
|
386 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
387 20 2.95528 3.59904 0.11593 3.50489 20 - -
|
|
388 1.38629 1.38629 1.38629 1.38629
|
|
389 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
390 21 0.14043 3.39140 2.80915 3.29412 21 - -
|
|
391 1.38629 1.38629 1.38629 1.38629
|
|
392 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
393 22 0.14043 3.39140 2.80915 3.29412 22 - -
|
|
394 1.38629 1.38629 1.38629 1.38629
|
|
395 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
396 23 2.95528 3.59904 0.11593 3.50489 23 - -
|
|
397 1.38629 1.38629 1.38629 1.38629
|
|
398 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
399 24 3.09986 2.60230 3.14759 0.17687 24 - -
|
|
400 1.38629 1.38629 1.38629 1.38629
|
|
401 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
402 25 0.14043 3.39140 2.80915 3.29412 25 - -
|
|
403 1.38629 1.38629 1.38629 1.38629
|
|
404 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
405 26 3.09986 2.60230 3.14759 0.17687 26 - -
|
|
406 1.38629 1.38629 1.38629 1.38629
|
|
407 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
408 27 2.95528 3.59904 0.11593 3.50489 27 - -
|
|
409 1.38629 1.38629 1.38629 1.38629
|
|
410 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
411 28 3.09986 2.60230 3.14759 0.17687 28 - -
|
|
412 1.38629 1.38629 1.38629 1.38629
|
|
413 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
414 29 3.09986 2.60230 3.14759 0.17687 29 - -
|
|
415 1.38629 1.38629 1.38629 1.38629
|
|
416 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
417 30 3.44594 0.12869 3.49485 2.83833 30 - -
|
|
418 1.38629 1.38629 1.38629 1.38629
|
|
419 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
420 31 3.44594 0.12869 3.49485 2.83833 31 - -
|
|
421 1.38629 1.38629 1.38629 1.38629
|
|
422 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
423 32 3.09986 2.60230 3.14759 0.17687 32 - -
|
|
424 1.38629 1.38629 1.38629 1.38629
|
|
425 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
426 33 3.09986 2.60230 3.14759 0.17687 33 - -
|
|
427 1.38629 1.38629 1.38629 1.38629
|
|
428 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
429 34 3.44594 0.12869 3.49485 2.83833 34 - -
|
|
430 1.38629 1.38629 1.38629 1.38629
|
|
431 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
432 35 2.95528 3.59904 0.11593 3.50489 35 - -
|
|
433 1.38629 1.38629 1.38629 1.38629
|
|
434 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
435 36 0.14043 3.39140 2.80915 3.29412 36 - -
|
|
436 1.38629 1.38629 1.38629 1.38629
|
|
437 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
438 37 2.95528 3.59904 0.11593 3.50489 37 - -
|
|
439 1.38629 1.38629 1.38629 1.38629
|
|
440 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
441 38 3.09986 2.60230 3.14759 0.17687 38 - -
|
|
442 1.38629 1.38629 1.38629 1.38629
|
|
443 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
444 39 2.95528 3.59904 0.11593 3.50489 39 - -
|
|
445 1.38629 1.38629 1.38629 1.38629
|
|
446 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
447 40 2.95528 3.59904 0.11593 3.50489 40 - -
|
|
448 1.38629 1.38629 1.38629 1.38629
|
|
449 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
450 41 0.14043 3.39140 2.80915 3.29412 41 - -
|
|
451 1.38629 1.38629 1.38629 1.38629
|
|
452 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
453 42 2.95528 3.59904 0.11593 3.50489 42 - -
|
|
454 1.38629 1.38629 1.38629 1.38629
|
|
455 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
456 43 3.09986 2.60230 3.14759 0.17687 43 - -
|
|
457 1.38629 1.38629 1.38629 1.38629
|
|
458 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
459 44 3.09986 2.60230 3.14759 0.17687 44 - -
|
|
460 1.38629 1.38629 1.38629 1.38629
|
|
461 0.03665 4.01776 4.01776 1.46634 0.26236 1.09861 0.40547
|
|
462 45 3.44594 0.12869 3.49485 2.83833 45 - -
|
|
463 1.38629 1.38629 1.38629 1.38629
|
|
464 0.01849 3.99961 * 1.46634 0.26236 0.00000 *
|
|
465 //
|
|
466 HMMER3/b [3.0 | March 2010]
|
|
467 NAME 3_End_Haptophyceae_58S_end_three_long
|
|
468 LENG 45
|
|
469 ALPH DNA
|
|
470 RF no
|
|
471 CS no
|
|
472 MAP yes
|
|
473 DATE Thu Jan 19 21:10:47 2012
|
|
474 NSEQ 2
|
|
475 EFFN 2.000000
|
|
476 CKSUM 1952189013
|
|
477 STATS LOCAL MSV -7.3435 0.72833
|
|
478 STATS LOCAL VITERBI -8.3275 0.72833
|
|
479 STATS LOCAL FORWARD -3.1158 0.72833
|
|
480 HMM A C G T
|
|
481 m->m m->i m->d i->m i->i d->m d->d
|
|
482 COMPO 2.02063 1.13480 1.20684 1.39919
|
|
483 1.38629 1.38629 1.38629 1.38629
|
|
484 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
|
|
485 1 2.81865 0.23582 2.88868 2.35662 1 - -
|
|
486 1.38629 1.38629 1.38629 1.38629
|
|
487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
488 2 2.53331 3.02441 0.20344 2.88069 2 - -
|
|
489 1.38629 1.38629 1.38629 1.38629
|
|
490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
491 3 2.81865 0.23582 2.88868 2.35662 3 - -
|
|
492 1.38629 1.38629 1.38629 1.38629
|
|
493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
494 4 2.57915 2.25909 2.64442 0.28946 4 - -
|
|
495 1.38629 1.38629 1.38629 1.38629
|
|
496 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
497 5 2.81865 0.23582 2.88868 2.35662 5 - -
|
|
498 1.38629 1.38629 1.38629 1.38629
|
|
499 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
500 6 2.81865 0.23582 2.88868 2.35662 6 - -
|
|
501 1.38629 1.38629 1.38629 1.38629
|
|
502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
503 7 2.81865 0.23582 2.88868 2.35662 7 - -
|
|
504 1.38629 1.38629 1.38629 1.38629
|
|
505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
506 8 2.53331 3.02441 0.20344 2.88069 8 - -
|
|
507 1.38629 1.38629 1.38629 1.38629
|
|
508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
509 9 2.53331 3.02441 0.20344 2.88069 9 - -
|
|
510 1.38629 1.38629 1.38629 1.38629
|
|
511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
512 10 2.53331 3.02441 0.20344 2.88069 10 - -
|
|
513 1.38629 1.38629 1.38629 1.38629
|
|
514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
515 11 2.57915 2.25909 2.64442 0.28946 11 - -
|
|
516 1.38629 1.38629 1.38629 1.38629
|
|
517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
518 12 2.57915 2.25909 2.64442 0.28946 12 - -
|
|
519 1.38629 1.38629 1.38629 1.38629
|
|
520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
521 13 2.81865 0.23582 2.88868 2.35662 13 - -
|
|
522 1.38629 1.38629 1.38629 1.38629
|
|
523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
524 14 2.81865 0.23582 2.88868 2.35662 14 - -
|
|
525 1.38629 1.38629 1.38629 1.38629
|
|
526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
527 15 2.53331 3.02441 0.20344 2.88069 15 - -
|
|
528 1.38629 1.38629 1.38629 1.38629
|
|
529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
530 16 2.81865 0.23582 2.88868 2.35662 16 - -
|
|
531 1.38629 1.38629 1.38629 1.38629
|
|
532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
533 17 2.81865 0.23582 2.88868 2.35662 17 - -
|
|
534 1.38629 1.38629 1.38629 1.38629
|
|
535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
536 18 2.81865 0.23582 2.88868 2.35662 18 - -
|
|
537 1.38629 1.38629 1.38629 1.38629
|
|
538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
539 19 2.53331 3.02441 0.20344 2.88069 19 - -
|
|
540 1.38629 1.38629 1.38629 1.38629
|
|
541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
542 20 2.53331 3.02441 0.20344 2.88069 20 - -
|
|
543 1.38629 1.38629 1.38629 1.38629
|
|
544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
545 21 2.53331 3.02441 0.20344 2.88069 21 - -
|
|
546 1.38629 1.38629 1.38629 1.38629
|
|
547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
548 22 0.23862 2.84929 2.43386 2.70756 22 - -
|
|
549 1.38629 1.38629 1.38629 1.38629
|
|
550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
551 23 1.89532 1.96405 1.06955 1.00436 23 - -
|
|
552 1.38629 1.38629 1.38629 1.38629
|
|
553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
554 24 2.81865 0.23582 2.88868 2.35662 24 - -
|
|
555 1.38629 1.38629 1.38629 1.38629
|
|
556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
557 25 0.23862 2.84929 2.43386 2.70756 25 - -
|
|
558 1.38629 1.38629 1.38629 1.38629
|
|
559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
560 26 2.57915 2.25909 2.64442 0.28946 26 - -
|
|
561 1.38629 1.38629 1.38629 1.38629
|
|
562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
563 27 2.53331 3.02441 0.20344 2.88069 27 - -
|
|
564 1.38629 1.38629 1.38629 1.38629
|
|
565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
566 28 2.57915 2.25909 2.64442 0.28946 28 - -
|
|
567 1.38629 1.38629 1.38629 1.38629
|
|
568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
569 29 2.81865 0.23582 2.88868 2.35662 29 - -
|
|
570 1.38629 1.38629 1.38629 1.38629
|
|
571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
572 30 2.57915 2.25909 2.64442 0.28946 30 - -
|
|
573 1.38629 1.38629 1.38629 1.38629
|
|
574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
575 31 2.81865 0.23582 2.88868 2.35662 31 - -
|
|
576 1.38629 1.38629 1.38629 1.38629
|
|
577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
578 32 2.57915 2.25909 2.64442 0.28946 32 - -
|
|
579 1.38629 1.38629 1.38629 1.38629
|
|
580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
581 33 2.57915 2.25909 2.64442 0.28946 33 - -
|
|
582 1.38629 1.38629 1.38629 1.38629
|
|
583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
584 34 2.81865 0.23582 2.88868 2.35662 34 - -
|
|
585 1.38629 1.38629 1.38629 1.38629
|
|
586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
587 35 2.53331 3.02441 0.20344 2.88069 35 - -
|
|
588 1.38629 1.38629 1.38629 1.38629
|
|
589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
590 36 0.23862 2.84929 2.43386 2.70756 36 - -
|
|
591 1.38629 1.38629 1.38629 1.38629
|
|
592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
593 37 2.53331 3.02441 0.20344 2.88069 37 - -
|
|
594 1.38629 1.38629 1.38629 1.38629
|
|
595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
596 38 2.57915 2.25909 2.64442 0.28946 38 - -
|
|
597 1.38629 1.38629 1.38629 1.38629
|
|
598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
599 39 2.53331 3.02441 0.20344 2.88069 39 - -
|
|
600 1.38629 1.38629 1.38629 1.38629
|
|
601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
602 40 2.53331 3.02441 0.20344 2.88069 40 - -
|
|
603 1.38629 1.38629 1.38629 1.38629
|
|
604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
605 41 2.81865 0.23582 2.88868 2.35662 41 - -
|
|
606 1.38629 1.38629 1.38629 1.38629
|
|
607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
608 42 2.53331 3.02441 0.20344 2.88069 42 - -
|
|
609 1.38629 1.38629 1.38629 1.38629
|
|
610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
611 43 2.57915 2.25909 2.64442 0.28946 43 - -
|
|
612 1.38629 1.38629 1.38629 1.38629
|
|
613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
614 44 2.81865 0.23582 2.88868 2.35662 44 - -
|
|
615 1.38629 1.38629 1.38629 1.38629
|
|
616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
|
|
617 45 2.57915 2.25909 2.64442 0.28946 45 - -
|
|
618 1.38629 1.38629 1.38629 1.38629
|
|
619 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
|
|
620 //
|
|
621 HMMER3/b [3.0 | March 2010]
|
|
622 NAME 3_End_Haptophyceae_58S_end_two_long
|
|
623 LENG 45
|
|
624 ALPH DNA
|
|
625 RF no
|
|
626 CS no
|
|
627 MAP yes
|
|
628 DATE Thu Jan 19 21:10:39 2012
|
|
629 NSEQ 4
|
|
630 EFFN 3.167969
|
|
631 CKSUM 386469025
|
|
632 STATS LOCAL MSV -8.0445 0.71933
|
|
633 STATS LOCAL VITERBI -7.7049 0.71933
|
|
634 STATS LOCAL FORWARD -4.0059 0.71933
|
|
635 HMM A C G T
|
|
636 m->m m->i m->d i->m i->i d->m d->d
|
|
637 COMPO 2.06060 1.09557 1.20633 1.43137
|
|
638 1.38629 1.38629 1.38629 1.38629
|
|
639 0.03797 3.98303 3.98303 1.46634 0.26236 0.00000 *
|
|
640 1 3.37444 0.13743 3.42635 2.78609 1 - -
|
|
641 1.38629 1.38629 1.38629 1.38629
|
|
642 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
643 2 2.91173 3.53592 0.12299 3.43528 2 - -
|
|
644 1.38629 1.38629 1.38629 1.38629
|
|
645 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
646 3 3.37444 0.13743 3.42635 2.78609 3 - -
|
|
647 1.38629 1.38629 1.38629 1.38629
|
|
648 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
649 4 3.03758 2.56263 3.08768 0.18713 4 - -
|
|
650 1.38629 1.38629 1.38629 1.38629
|
|
651 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
652 5 3.03758 2.56263 3.08768 0.18713 5 - -
|
|
653 1.38629 1.38629 1.38629 1.38629
|
|
654 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
655 6 2.91173 3.53592 0.12299 3.43528 6 - -
|
|
656 1.38629 1.38629 1.38629 1.38629
|
|
657 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
658 7 3.37444 0.13743 3.42635 2.78609 7 - -
|
|
659 1.38629 1.38629 1.38629 1.38629
|
|
660 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
661 8 2.91173 3.53592 0.12299 3.43528 8 - -
|
|
662 1.38629 1.38629 1.38629 1.38629
|
|
663 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
664 9 2.91173 3.53592 0.12299 3.43528 9 - -
|
|
665 1.38629 1.38629 1.38629 1.38629
|
|
666 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
667 10 2.91173 3.53592 0.12299 3.43528 10 - -
|
|
668 1.38629 1.38629 1.38629 1.38629
|
|
669 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
670 11 3.03758 2.56263 3.08768 0.18713 11 - -
|
|
671 1.38629 1.38629 1.38629 1.38629
|
|
672 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
673 12 3.03758 2.56263 3.08768 0.18713 12 - -
|
|
674 1.38629 1.38629 1.38629 1.38629
|
|
675 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
676 13 3.37444 0.13743 3.42635 2.78609 13 - -
|
|
677 1.38629 1.38629 1.38629 1.38629
|
|
678 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
679 14 3.37444 0.13743 3.42635 2.78609 14 - -
|
|
680 1.38629 1.38629 1.38629 1.38629
|
|
681 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
682 15 2.91173 3.53592 0.12299 3.43528 15 - -
|
|
683 1.38629 1.38629 1.38629 1.38629
|
|
684 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
685 16 3.37444 0.13743 3.42635 2.78609 16 - -
|
|
686 1.38629 1.38629 1.38629 1.38629
|
|
687 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
688 17 3.37444 0.13743 3.42635 2.78609 17 - -
|
|
689 1.38629 1.38629 1.38629 1.38629
|
|
690 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
691 18 3.37444 0.13743 3.42635 2.78609 18 - -
|
|
692 1.38629 1.38629 1.38629 1.38629
|
|
693 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
694 19 2.91173 3.53592 0.12299 3.43528 19 - -
|
|
695 1.38629 1.38629 1.38629 1.38629
|
|
696 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
697 20 3.37444 0.13743 3.42635 2.78609 20 - -
|
|
698 1.38629 1.38629 1.38629 1.38629
|
|
699 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
700 21 0.14880 3.32943 2.76878 3.22633 21 - -
|
|
701 1.38629 1.38629 1.38629 1.38629
|
|
702 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
703 22 0.14880 3.32943 2.76878 3.22633 22 - -
|
|
704 1.38629 1.38629 1.38629 1.38629
|
|
705 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
706 23 2.91173 3.53592 0.12299 3.43528 23 - -
|
|
707 1.38629 1.38629 1.38629 1.38629
|
|
708 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
709 24 3.37444 0.13743 3.42635 2.78609 24 - -
|
|
710 1.38629 1.38629 1.38629 1.38629
|
|
711 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
712 25 0.14880 3.32943 2.76878 3.22633 25 - -
|
|
713 1.38629 1.38629 1.38629 1.38629
|
|
714 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
715 26 3.03758 2.56263 3.08768 0.18713 26 - -
|
|
716 1.38629 1.38629 1.38629 1.38629
|
|
717 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
718 27 2.91173 3.53592 0.12299 3.43528 27 - -
|
|
719 1.38629 1.38629 1.38629 1.38629
|
|
720 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
721 28 3.03758 2.56263 3.08768 0.18713 28 - -
|
|
722 1.38629 1.38629 1.38629 1.38629
|
|
723 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
724 29 3.37444 0.13743 3.42635 2.78609 29 - -
|
|
725 1.38629 1.38629 1.38629 1.38629
|
|
726 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
727 30 3.03758 2.56263 3.08768 0.18713 30 - -
|
|
728 1.38629 1.38629 1.38629 1.38629
|
|
729 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
730 31 3.37444 0.13743 3.42635 2.78609 31 - -
|
|
731 1.38629 1.38629 1.38629 1.38629
|
|
732 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
733 32 3.03758 2.56263 3.08768 0.18713 32 - -
|
|
734 1.38629 1.38629 1.38629 1.38629
|
|
735 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
736 33 3.03758 2.56263 3.08768 0.18713 33 - -
|
|
737 1.38629 1.38629 1.38629 1.38629
|
|
738 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
739 34 3.37444 0.13743 3.42635 2.78609 34 - -
|
|
740 1.38629 1.38629 1.38629 1.38629
|
|
741 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
742 35 2.91173 3.53592 0.12299 3.43528 35 - -
|
|
743 1.38629 1.38629 1.38629 1.38629
|
|
744 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
745 36 0.14880 3.32943 2.76878 3.22633 36 - -
|
|
746 1.38629 1.38629 1.38629 1.38629
|
|
747 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
748 37 2.91173 3.53592 0.12299 3.43528 37 - -
|
|
749 1.38629 1.38629 1.38629 1.38629
|
|
750 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
751 38 3.03758 2.56263 3.08768 0.18713 38 - -
|
|
752 1.38629 1.38629 1.38629 1.38629
|
|
753 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
754 39 2.91173 3.53592 0.12299 3.43528 39 - -
|
|
755 1.38629 1.38629 1.38629 1.38629
|
|
756 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
757 40 2.91173 3.53592 0.12299 3.43528 40 - -
|
|
758 1.38629 1.38629 1.38629 1.38629
|
|
759 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
760 41 3.37444 0.13743 3.42635 2.78609 41 - -
|
|
761 1.38629 1.38629 1.38629 1.38629
|
|
762 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
763 42 2.91173 3.53592 0.12299 3.43528 42 - -
|
|
764 1.38629 1.38629 1.38629 1.38629
|
|
765 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
766 43 3.03758 2.56263 3.08768 0.18713 43 - -
|
|
767 1.38629 1.38629 1.38629 1.38629
|
|
768 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
769 44 3.37444 0.13743 3.42635 2.78609 44 - -
|
|
770 1.38629 1.38629 1.38629 1.38629
|
|
771 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
|
|
772 45 3.37444 0.13743 3.42635 2.78609 45 - -
|
|
773 1.38629 1.38629 1.38629 1.38629
|
|
774 0.01917 3.96423 * 1.46634 0.26236 0.00000 *
|
|
775 //
|
|
776 HMMER3/b [3.0 | March 2010]
|
|
777 NAME 2_5.8_Haptophyceae_58S_start_one_long
|
|
778 LENG 45
|
|
779 ALPH DNA
|
|
780 RF no
|
|
781 CS no
|
|
782 MAP yes
|
|
783 DATE Sat Oct 8 23:12:04 2011
|
|
784 NSEQ 17
|
|
785 EFFN 3.415771
|
|
786 CKSUM 984267216
|
|
787 STATS LOCAL MSV -7.5702 0.71931
|
|
788 STATS LOCAL VITERBI -7.6889 0.71931
|
|
789 STATS LOCAL FORWARD -4.3391 0.71931
|
|
790 HMM A C G T
|
|
791 m->m m->i m->d i->m i->i d->m d->d
|
|
792 COMPO 1.26671 1.28068 1.46004 1.56941
|
|
793 1.38629 1.38629 1.38629 1.38629
|
|
794 0.03626 4.02816 4.02816 1.46634 0.26236 0.00000 *
|
|
795 1 3.46689 0.12625 3.51491 2.85353 1 - -
|
|
796 1.38629 1.38629 1.38629 1.38629
|
|
797 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
798 2 0.13808 3.40961 2.82095 3.31407 2 - -
|
|
799 1.38629 1.38629 1.38629 1.38629
|
|
800 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
801 3 0.13808 3.40961 2.82095 3.31407 3 - -
|
|
802 1.38629 1.38629 1.38629 1.38629
|
|
803 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
804 4 3.46689 0.12625 3.51491 2.85353 4 - -
|
|
805 1.38629 1.38629 1.38629 1.38629
|
|
806 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
807 5 3.11833 2.61403 3.16534 0.17396 5 - -
|
|
808 1.38629 1.38629 1.38629 1.38629
|
|
809 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
810 6 3.46689 0.12625 3.51491 2.85353 6 - -
|
|
811 1.38629 1.38629 1.38629 1.38629
|
|
812 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
813 7 3.46689 0.12625 3.51491 2.85353 7 - -
|
|
814 1.38629 1.38629 1.38629 1.38629
|
|
815 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
816 8 3.11833 2.61403 3.16534 0.17396 8 - -
|
|
817 1.38629 1.38629 1.38629 1.38629
|
|
818 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
819 9 2.42114 3.33331 0.17948 3.22383 9 - -
|
|
820 1.38629 1.38629 1.38629 1.38629
|
|
821 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
822 10 3.11833 2.61403 3.16534 0.17396 10 - -
|
|
823 1.38629 1.38629 1.38629 1.38629
|
|
824 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
825 11 3.46689 0.12625 3.51491 2.85353 11 - -
|
|
826 1.38629 1.38629 1.38629 1.38629
|
|
827 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
828 12 2.96789 3.61745 0.11396 3.52522 12 - -
|
|
829 1.38629 1.38629 1.38629 1.38629
|
|
830 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
831 13 0.13808 3.40961 2.82095 3.31407 13 - -
|
|
832 1.38629 1.38629 1.38629 1.38629
|
|
833 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
834 14 0.13808 3.40961 2.82095 3.31407 14 - -
|
|
835 1.38629 1.38629 1.38629 1.38629
|
|
836 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
837 15 2.96789 3.61745 0.11396 3.52522 15 - -
|
|
838 1.38629 1.38629 1.38629 1.38629
|
|
839 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
840 16 2.96789 3.61745 0.11396 3.52522 16 - -
|
|
841 1.38629 1.38629 1.38629 1.38629
|
|
842 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
843 17 0.13808 3.40961 2.82095 3.31407 17 - -
|
|
844 1.38629 1.38629 1.38629 1.38629
|
|
845 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
846 18 3.11833 2.61403 3.16534 0.17396 18 - -
|
|
847 1.38629 1.38629 1.38629 1.38629
|
|
848 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
849 19 0.13808 3.40961 2.82095 3.31407 19 - -
|
|
850 1.38629 1.38629 1.38629 1.38629
|
|
851 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
852 20 3.11833 2.61403 3.16534 0.17396 20 - -
|
|
853 1.38629 1.38629 1.38629 1.38629
|
|
854 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
855 21 3.46689 0.12625 3.51491 2.85353 21 - -
|
|
856 1.38629 1.38629 1.38629 1.38629
|
|
857 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
858 22 3.11833 2.61403 3.16534 0.17396 22 - -
|
|
859 1.38629 1.38629 1.38629 1.38629
|
|
860 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
861 23 3.11833 2.61403 3.16534 0.17396 23 - -
|
|
862 1.38629 1.38629 1.38629 1.38629
|
|
863 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
864 24 2.67107 3.05829 0.22183 2.49130 24 - -
|
|
865 1.38629 1.38629 1.38629 1.38629
|
|
866 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
867 25 2.96789 3.61745 0.11396 3.52522 25 - -
|
|
868 1.38629 1.38629 1.38629 1.38629
|
|
869 0.07935 4.02816 2.83906 1.46634 0.26236 1.09861 0.40547
|
|
870 26 2.78802 0.26730 2.44352 2.45156 26 - -
|
|
871 1.38629 1.38629 1.38629 1.38629
|
|
872 0.03783 3.98664 3.98664 1.46634 0.26236 0.47560 0.97156
|
|
873 27 3.11833 2.61403 3.16534 0.17396 27 - -
|
|
874 1.38629 1.38629 1.38629 1.38629
|
|
875 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
876 28 3.21286 0.18569 3.26887 2.39494 28 - -
|
|
877 1.38629 1.38629 1.38629 1.38629
|
|
878 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
879 29 3.46689 0.12625 3.51491 2.85353 29 - -
|
|
880 1.38629 1.38629 1.38629 1.38629
|
|
881 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
882 30 3.46689 0.12625 3.51491 2.85353 30 - -
|
|
883 1.38629 1.38629 1.38629 1.38629
|
|
884 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
885 31 2.96789 3.61745 0.11396 3.52522 31 - -
|
|
886 1.38629 1.38629 1.38629 1.38629
|
|
887 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
888 32 3.46689 0.12625 3.51491 2.85353 32 - -
|
|
889 1.38629 1.38629 1.38629 1.38629
|
|
890 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
891 33 0.13808 3.40961 2.82095 3.31407 33 - -
|
|
892 1.38629 1.38629 1.38629 1.38629
|
|
893 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
894 34 0.13808 3.40961 2.82095 3.31407 34 - -
|
|
895 1.38629 1.38629 1.38629 1.38629
|
|
896 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
897 35 2.63508 0.21517 3.05648 2.59251 35 - -
|
|
898 1.38629 1.38629 1.38629 1.38629
|
|
899 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
900 36 2.96789 3.61745 0.11396 3.52522 36 - -
|
|
901 1.38629 1.38629 1.38629 1.38629
|
|
902 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
903 37 0.13808 3.40961 2.82095 3.31407 37 - -
|
|
904 1.38629 1.38629 1.38629 1.38629
|
|
905 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
906 38 3.11833 2.61403 3.16534 0.17396 38 - -
|
|
907 1.38629 1.38629 1.38629 1.38629
|
|
908 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
909 39 2.96789 3.61745 0.11396 3.52522 39 - -
|
|
910 1.38629 1.38629 1.38629 1.38629
|
|
911 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
912 40 0.13808 3.40961 2.82095 3.31407 40 - -
|
|
913 1.38629 1.38629 1.38629 1.38629
|
|
914 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
915 41 0.13808 3.40961 2.82095 3.31407 41 - -
|
|
916 1.38629 1.38629 1.38629 1.38629
|
|
917 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
918 42 2.96789 3.61745 0.11396 3.52522 42 - -
|
|
919 1.38629 1.38629 1.38629 1.38629
|
|
920 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
921 43 0.13808 3.40961 2.82095 3.31407 43 - -
|
|
922 1.38629 1.38629 1.38629 1.38629
|
|
923 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
924 44 0.13808 3.40961 2.82095 3.31407 44 - -
|
|
925 1.38629 1.38629 1.38629 1.38629
|
|
926 0.03626 4.02816 4.02816 1.46634 0.26236 1.09861 0.40547
|
|
927 45 3.46689 0.12625 3.51491 2.85353 45 - -
|
|
928 1.38629 1.38629 1.38629 1.38629
|
|
929 0.01830 4.01020 * 1.46634 0.26236 0.00000 *
|
|
930 //
|
|
931 HMMER3/b [3.0 | March 2010]
|
|
932 NAME 2_5.8_Haptophyceae_58S_start_two_long
|
|
933 LENG 45
|
|
934 ALPH DNA
|
|
935 RF no
|
|
936 CS no
|
|
937 MAP yes
|
|
938 DATE Sat Oct 8 23:12:12 2011
|
|
939 NSEQ 10
|
|
940 EFFN 3.286133
|
|
941 CKSUM 3298406165
|
|
942 STATS LOCAL MSV -8.1939 0.71932
|
|
943 STATS LOCAL VITERBI -7.5734 0.71932
|
|
944 STATS LOCAL FORWARD -4.1231 0.71932
|
|
945 HMM A C G T
|
|
946 m->m m->i m->d i->m i->i d->m d->d
|
|
947 COMPO 1.35247 1.26032 1.44611 1.50350
|
|
948 1.38629 1.38629 1.38629 1.38629
|
|
949 0.03714 4.00481 4.00481 1.46634 0.26236 0.00000 *
|
|
950 1 3.41954 0.13184 3.46957 2.81911 1 - -
|
|
951 1.38629 1.38629 1.38629 1.38629
|
|
952 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
953 2 0.14346 3.36849 2.79427 3.26904 2 - -
|
|
954 1.38629 1.38629 1.38629 1.38629
|
|
955 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
956 3 0.14346 3.36849 2.79427 3.26904 3 - -
|
|
957 1.38629 1.38629 1.38629 1.38629
|
|
958 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
959 4 3.41954 0.13184 3.46957 2.81911 4 - -
|
|
960 1.38629 1.38629 1.38629 1.38629
|
|
961 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
962 5 3.07674 2.58759 3.12535 0.18060 5 - -
|
|
963 1.38629 1.38629 1.38629 1.38629
|
|
964 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
965 6 3.41954 0.13184 3.46957 2.81911 6 - -
|
|
966 1.38629 1.38629 1.38629 1.38629
|
|
967 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
968 7 3.41954 0.13184 3.46957 2.81911 7 - -
|
|
969 1.38629 1.38629 1.38629 1.38629
|
|
970 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
971 8 3.07674 2.58759 3.12535 0.18060 8 - -
|
|
972 1.38629 1.38629 1.38629 1.38629
|
|
973 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
974 9 2.93930 3.57580 0.11848 3.47923 9 - -
|
|
975 1.38629 1.38629 1.38629 1.38629
|
|
976 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
977 10 3.41954 0.13184 3.46957 2.81911 10 - -
|
|
978 1.38629 1.38629 1.38629 1.38629
|
|
979 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
980 11 3.41954 0.13184 3.46957 2.81911 11 - -
|
|
981 1.38629 1.38629 1.38629 1.38629
|
|
982 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
983 12 2.93930 3.57580 0.11848 3.47923 12 - -
|
|
984 1.38629 1.38629 1.38629 1.38629
|
|
985 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
986 13 0.14346 3.36849 2.79427 3.26904 13 - -
|
|
987 1.38629 1.38629 1.38629 1.38629
|
|
988 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
989 14 3.07674 2.58759 3.12535 0.18060 14 - -
|
|
990 1.38629 1.38629 1.38629 1.38629
|
|
991 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
992 15 2.93930 3.57580 0.11848 3.47923 15 - -
|
|
993 1.38629 1.38629 1.38629 1.38629
|
|
994 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
995 16 2.93930 3.57580 0.11848 3.47923 16 - -
|
|
996 1.38629 1.38629 1.38629 1.38629
|
|
997 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
998 17 0.14346 3.36849 2.79427 3.26904 17 - -
|
|
999 1.38629 1.38629 1.38629 1.38629
|
|
1000 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1001 18 3.07674 2.58759 3.12535 0.18060 18 - -
|
|
1002 1.38629 1.38629 1.38629 1.38629
|
|
1003 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1004 19 0.14346 3.36849 2.79427 3.26904 19 - -
|
|
1005 1.38629 1.38629 1.38629 1.38629
|
|
1006 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1007 20 3.07674 2.58759 3.12535 0.18060 20 - -
|
|
1008 1.38629 1.38629 1.38629 1.38629
|
|
1009 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1010 21 3.41954 0.13184 3.46957 2.81911 21 - -
|
|
1011 1.38629 1.38629 1.38629 1.38629
|
|
1012 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1013 22 3.07674 2.58759 3.12535 0.18060 22 - -
|
|
1014 1.38629 1.38629 1.38629 1.38629
|
|
1015 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1016 23 3.07674 2.58759 3.12535 0.18060 23 - -
|
|
1017 1.38629 1.38629 1.38629 1.38629
|
|
1018 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1019 24 2.93930 3.57580 0.11848 3.47923 24 - -
|
|
1020 1.38629 1.38629 1.38629 1.38629
|
|
1021 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1022 25 2.93930 3.57580 0.11848 3.47923 25 - -
|
|
1023 1.38629 1.38629 1.38629 1.38629
|
|
1024 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1025 26 3.41954 0.13184 3.46957 2.81911 26 - -
|
|
1026 1.38629 1.38629 1.38629 1.38629
|
|
1027 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1028 27 3.07674 2.58759 3.12535 0.18060 27 - -
|
|
1029 1.38629 1.38629 1.38629 1.38629
|
|
1030 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1031 28 3.41954 0.13184 3.46957 2.81911 28 - -
|
|
1032 1.38629 1.38629 1.38629 1.38629
|
|
1033 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1034 29 3.07674 2.58759 3.12535 0.18060 29 - -
|
|
1035 1.38629 1.38629 1.38629 1.38629
|
|
1036 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1037 30 3.41954 0.13184 3.46957 2.81911 30 - -
|
|
1038 1.38629 1.38629 1.38629 1.38629
|
|
1039 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1040 31 2.93930 3.57580 0.11848 3.47923 31 - -
|
|
1041 1.38629 1.38629 1.38629 1.38629
|
|
1042 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1043 32 3.41954 0.13184 3.46957 2.81911 32 - -
|
|
1044 1.38629 1.38629 1.38629 1.38629
|
|
1045 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1046 33 0.14346 3.36849 2.79427 3.26904 33 - -
|
|
1047 1.38629 1.38629 1.38629 1.38629
|
|
1048 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1049 34 0.33718 2.84959 1.81694 2.72072 34 - -
|
|
1050 1.38629 1.38629 1.38629 1.38629
|
|
1051 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1052 35 3.41954 0.13184 3.46957 2.81911 35 - -
|
|
1053 1.38629 1.38629 1.38629 1.38629
|
|
1054 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1055 36 2.93930 3.57580 0.11848 3.47923 36 - -
|
|
1056 1.38629 1.38629 1.38629 1.38629
|
|
1057 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1058 37 0.14346 3.36849 2.79427 3.26904 37 - -
|
|
1059 1.38629 1.38629 1.38629 1.38629
|
|
1060 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1061 38 3.07674 2.58759 3.12535 0.18060 38 - -
|
|
1062 1.38629 1.38629 1.38629 1.38629
|
|
1063 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1064 39 2.93930 3.57580 0.11848 3.47923 39 - -
|
|
1065 1.38629 1.38629 1.38629 1.38629
|
|
1066 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1067 40 0.14346 3.36849 2.79427 3.26904 40 - -
|
|
1068 1.38629 1.38629 1.38629 1.38629
|
|
1069 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1070 41 0.14346 3.36849 2.79427 3.26904 41 - -
|
|
1071 1.38629 1.38629 1.38629 1.38629
|
|
1072 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1073 42 2.93930 3.57580 0.11848 3.47923 42 - -
|
|
1074 1.38629 1.38629 1.38629 1.38629
|
|
1075 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1076 43 0.14346 3.36849 2.79427 3.26904 43 - -
|
|
1077 1.38629 1.38629 1.38629 1.38629
|
|
1078 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1079 44 0.14346 3.36849 2.79427 3.26904 44 - -
|
|
1080 1.38629 1.38629 1.38629 1.38629
|
|
1081 0.03714 4.00481 4.00481 1.46634 0.26236 1.09861 0.40547
|
|
1082 45 3.41954 0.13184 3.46957 2.81911 45 - -
|
|
1083 1.38629 1.38629 1.38629 1.38629
|
|
1084 0.01874 3.98641 * 1.46634 0.26236 0.00000 *
|
|
1085 //
|
|
1086 HMMER3/b [3.0 | March 2010]
|
|
1087 NAME 4_LSU_Haptophyceae_4_LSU_start_one_long
|
|
1088 LENG 45
|
|
1089 ALPH DNA
|
|
1090 RF no
|
|
1091 CS no
|
|
1092 MAP yes
|
|
1093 DATE Sat Oct 8 23:27:11 2011
|
|
1094 NSEQ 10
|
|
1095 EFFN 3.325195
|
|
1096 CKSUM 3619195996
|
|
1097 STATS LOCAL MSV -7.9947 0.71933
|
|
1098 STATS LOCAL VITERBI -7.6796 0.71933
|
|
1099 STATS LOCAL FORWARD -4.1782 0.71933
|
|
1100 HMM A C G T
|
|
1101 m->m m->i m->d i->m i->i d->m d->d
|
|
1102 COMPO 1.21992 1.19976 1.63918 1.56380
|
|
1103 1.38629 1.38629 1.38629 1.38629
|
|
1104 0.03687 4.01190 4.01190 1.46634 0.26236 0.00000 *
|
|
1105 1 3.43404 0.13010 3.48346 2.82967 1 - -
|
|
1106 1.38629 1.38629 1.38629 1.38629
|
|
1107 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1108 2 3.08942 2.59566 3.13755 0.17855 2 - -
|
|
1109 1.38629 1.38629 1.38629 1.38629
|
|
1110 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1111 3 3.43404 0.13010 3.48346 2.82967 3 - -
|
|
1112 1.38629 1.38629 1.38629 1.38629
|
|
1113 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1114 4 3.43404 0.13010 3.48346 2.82967 4 - -
|
|
1115 1.38629 1.38629 1.38629 1.38629
|
|
1116 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1117 5 3.08942 2.59566 3.13755 0.17855 5 - -
|
|
1118 1.38629 1.38629 1.38629 1.38629
|
|
1119 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1120 6 3.43404 0.13010 3.48346 2.82967 6 - -
|
|
1121 1.38629 1.38629 1.38629 1.38629
|
|
1122 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1123 7 3.43404 0.13010 3.48346 2.82967 7 - -
|
|
1124 1.38629 1.38629 1.38629 1.38629
|
|
1125 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1126 8 0.14179 3.38107 2.80245 3.28281 8 - -
|
|
1127 1.38629 1.38629 1.38629 1.38629
|
|
1128 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1129 9 3.08942 2.59566 3.13755 0.17855 9 - -
|
|
1130 1.38629 1.38629 1.38629 1.38629
|
|
1131 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1132 10 3.43404 0.13010 3.48346 2.82967 10 - -
|
|
1133 1.38629 1.38629 1.38629 1.38629
|
|
1134 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1135 11 2.94809 3.58857 0.11707 3.49333 11 - -
|
|
1136 1.38629 1.38629 1.38629 1.38629
|
|
1137 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1138 12 0.14179 3.38107 2.80245 3.28281 12 - -
|
|
1139 1.38629 1.38629 1.38629 1.38629
|
|
1140 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1141 13 0.14179 3.38107 2.80245 3.28281 13 - -
|
|
1142 1.38629 1.38629 1.38629 1.38629
|
|
1143 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1144 14 3.08942 2.59566 3.13755 0.17855 14 - -
|
|
1145 1.38629 1.38629 1.38629 1.38629
|
|
1146 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1147 15 2.94809 3.58857 0.11707 3.49333 15 - -
|
|
1148 1.38629 1.38629 1.38629 1.38629
|
|
1149 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1150 16 2.94809 3.58857 0.11707 3.49333 16 - -
|
|
1151 1.38629 1.38629 1.38629 1.38629
|
|
1152 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1153 17 0.14179 3.38107 2.80245 3.28281 17 - -
|
|
1154 1.38629 1.38629 1.38629 1.38629
|
|
1155 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1156 18 2.33674 2.54426 0.42594 1.76216 18 - -
|
|
1157 1.38629 1.38629 1.38629 1.38629
|
|
1158 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1159 19 3.43404 0.13010 3.48346 2.82967 19 - -
|
|
1160 1.38629 1.38629 1.38629 1.38629
|
|
1161 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1162 20 0.14179 3.38107 2.80245 3.28281 20 - -
|
|
1163 1.38629 1.38629 1.38629 1.38629
|
|
1164 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1165 21 0.14179 3.38107 2.80245 3.28281 21 - -
|
|
1166 1.38629 1.38629 1.38629 1.38629
|
|
1167 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1168 22 2.94809 3.58857 0.11707 3.49333 22 - -
|
|
1169 1.38629 1.38629 1.38629 1.38629
|
|
1170 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1171 23 0.14179 3.38107 2.80245 3.28281 23 - -
|
|
1172 1.38629 1.38629 1.38629 1.38629
|
|
1173 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1174 24 3.43404 0.13010 3.48346 2.82967 24 - -
|
|
1175 1.38629 1.38629 1.38629 1.38629
|
|
1176 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1177 25 3.08942 2.59566 3.13755 0.17855 25 - -
|
|
1178 1.38629 1.38629 1.38629 1.38629
|
|
1179 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1180 26 0.14179 3.38107 2.80245 3.28281 26 - -
|
|
1181 1.38629 1.38629 1.38629 1.38629
|
|
1182 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1183 27 3.43404 0.13010 3.48346 2.82967 27 - -
|
|
1184 1.38629 1.38629 1.38629 1.38629
|
|
1185 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1186 28 3.43404 0.13010 3.48346 2.82967 28 - -
|
|
1187 1.38629 1.38629 1.38629 1.38629
|
|
1188 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1189 29 3.43404 0.13010 3.48346 2.82967 29 - -
|
|
1190 1.38629 1.38629 1.38629 1.38629
|
|
1191 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1192 30 2.94809 3.58857 0.11707 3.49333 30 - -
|
|
1193 1.38629 1.38629 1.38629 1.38629
|
|
1194 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1195 31 3.43404 0.13010 3.48346 2.82967 31 - -
|
|
1196 1.38629 1.38629 1.38629 1.38629
|
|
1197 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1198 32 3.08942 2.59566 3.13755 0.17855 32 - -
|
|
1199 1.38629 1.38629 1.38629 1.38629
|
|
1200 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1201 33 2.94809 3.58857 0.11707 3.49333 33 - -
|
|
1202 1.38629 1.38629 1.38629 1.38629
|
|
1203 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1204 34 0.14179 3.38107 2.80245 3.28281 34 - -
|
|
1205 1.38629 1.38629 1.38629 1.38629
|
|
1206 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1207 35 0.14179 3.38107 2.80245 3.28281 35 - -
|
|
1208 1.38629 1.38629 1.38629 1.38629
|
|
1209 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1210 36 3.43404 0.13010 3.48346 2.82967 36 - -
|
|
1211 1.38629 1.38629 1.38629 1.38629
|
|
1212 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1213 37 3.08942 2.59566 3.13755 0.17855 37 - -
|
|
1214 1.38629 1.38629 1.38629 1.38629
|
|
1215 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1216 38 3.08942 2.59566 3.13755 0.17855 38 - -
|
|
1217 1.38629 1.38629 1.38629 1.38629
|
|
1218 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1219 39 0.14179 3.38107 2.80245 3.28281 39 - -
|
|
1220 1.38629 1.38629 1.38629 1.38629
|
|
1221 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1222 40 0.14179 3.38107 2.80245 3.28281 40 - -
|
|
1223 1.38629 1.38629 1.38629 1.38629
|
|
1224 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1225 41 2.94809 3.58857 0.11707 3.49333 41 - -
|
|
1226 1.38629 1.38629 1.38629 1.38629
|
|
1227 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1228 42 3.43404 0.13010 3.48346 2.82967 42 - -
|
|
1229 1.38629 1.38629 1.38629 1.38629
|
|
1230 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1231 43 0.14179 3.38107 2.80245 3.28281 43 - -
|
|
1232 1.38629 1.38629 1.38629 1.38629
|
|
1233 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1234 44 3.08942 2.59566 3.13755 0.17855 44 - -
|
|
1235 1.38629 1.38629 1.38629 1.38629
|
|
1236 0.03687 4.01190 4.01190 1.46634 0.26236 1.09861 0.40547
|
|
1237 45 0.14179 3.38107 2.80245 3.28281 45 - -
|
|
1238 1.38629 1.38629 1.38629 1.38629
|
|
1239 0.01860 3.99364 * 1.46634 0.26236 0.00000 *
|
|
1240 //
|
|
1241 HMMER3/b [3.0 | March 2010]
|
|
1242 NAME 4_LSU_Haptophyceae_4_LSU_start_two_long
|
|
1243 LENG 45
|
|
1244 ALPH DNA
|
|
1245 RF no
|
|
1246 CS no
|
|
1247 MAP yes
|
|
1248 DATE Sat Oct 8 23:27:21 2011
|
|
1249 NSEQ 6
|
|
1250 EFFN 3.331055
|
|
1251 CKSUM 3521784046
|
|
1252 STATS LOCAL MSV -8.2010 0.71932
|
|
1253 STATS LOCAL VITERBI -7.6469 0.71932
|
|
1254 STATS LOCAL FORWARD -4.0144 0.71932
|
|
1255 HMM A C G T
|
|
1256 m->m m->i m->d i->m i->i d->m d->d
|
|
1257 COMPO 1.15831 1.31544 1.48091 1.65969
|
|
1258 1.38629 1.38629 1.38629 1.38629
|
|
1259 0.03683 4.01296 4.01296 1.46634 0.26236 0.00000 *
|
|
1260 1 0.14154 3.38294 2.80366 3.28486 1 - -
|
|
1261 1.38629 1.38629 1.38629 1.38629
|
|
1262 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1263 2 3.43619 0.12984 3.48552 2.83124 2 - -
|
|
1264 1.38629 1.38629 1.38629 1.38629
|
|
1265 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1266 3 2.15088 1.44016 0.63909 2.12899 3 - -
|
|
1267 1.38629 1.38629 1.38629 1.38629
|
|
1268 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1269 4 3.43619 0.12984 3.48552 2.83124 4 - -
|
|
1270 1.38629 1.38629 1.38629 1.38629
|
|
1271 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1272 5 2.94939 3.59047 0.11686 3.49542 5 - -
|
|
1273 1.38629 1.38629 1.38629 1.38629
|
|
1274 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1275 6 3.43619 0.12984 3.48552 2.83124 6 - -
|
|
1276 1.38629 1.38629 1.38629 1.38629
|
|
1277 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1278 7 3.43619 0.12984 3.48552 2.83124 7 - -
|
|
1279 1.38629 1.38629 1.38629 1.38629
|
|
1280 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1281 8 0.14154 3.38294 2.80366 3.28486 8 - -
|
|
1282 1.38629 1.38629 1.38629 1.38629
|
|
1283 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1284 9 3.09131 2.59686 3.13936 0.17824 9 - -
|
|
1285 1.38629 1.38629 1.38629 1.38629
|
|
1286 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1287 10 3.43619 0.12984 3.48552 2.83124 10 - -
|
|
1288 1.38629 1.38629 1.38629 1.38629
|
|
1289 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1290 11 2.94939 3.59047 0.11686 3.49542 11 - -
|
|
1291 1.38629 1.38629 1.38629 1.38629
|
|
1292 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1293 12 0.14154 3.38294 2.80366 3.28486 12 - -
|
|
1294 1.38629 1.38629 1.38629 1.38629
|
|
1295 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1296 13 0.14154 3.38294 2.80366 3.28486 13 - -
|
|
1297 1.38629 1.38629 1.38629 1.38629
|
|
1298 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1299 14 3.09131 2.59686 3.13936 0.17824 14 - -
|
|
1300 1.38629 1.38629 1.38629 1.38629
|
|
1301 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1302 15 2.94939 3.59047 0.11686 3.49542 15 - -
|
|
1303 1.38629 1.38629 1.38629 1.38629
|
|
1304 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1305 16 0.14154 3.38294 2.80366 3.28486 16 - -
|
|
1306 1.38629 1.38629 1.38629 1.38629
|
|
1307 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1308 17 2.94939 3.59047 0.11686 3.49542 17 - -
|
|
1309 1.38629 1.38629 1.38629 1.38629
|
|
1310 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1311 18 2.94939 3.59047 0.11686 3.49542 18 - -
|
|
1312 1.38629 1.38629 1.38629 1.38629
|
|
1313 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1314 19 3.43619 0.12984 3.48552 2.83124 19 - -
|
|
1315 1.38629 1.38629 1.38629 1.38629
|
|
1316 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1317 20 0.14154 3.38294 2.80366 3.28486 20 - -
|
|
1318 1.38629 1.38629 1.38629 1.38629
|
|
1319 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1320 21 0.14154 3.38294 2.80366 3.28486 21 - -
|
|
1321 1.38629 1.38629 1.38629 1.38629
|
|
1322 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1323 22 2.94939 3.59047 0.11686 3.49542 22 - -
|
|
1324 1.38629 1.38629 1.38629 1.38629
|
|
1325 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1326 23 0.14154 3.38294 2.80366 3.28486 23 - -
|
|
1327 1.38629 1.38629 1.38629 1.38629
|
|
1328 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1329 24 3.43619 0.12984 3.48552 2.83124 24 - -
|
|
1330 1.38629 1.38629 1.38629 1.38629
|
|
1331 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1332 25 3.09131 2.59686 3.13936 0.17824 25 - -
|
|
1333 1.38629 1.38629 1.38629 1.38629
|
|
1334 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1335 26 0.14154 3.38294 2.80366 3.28486 26 - -
|
|
1336 1.38629 1.38629 1.38629 1.38629
|
|
1337 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1338 27 3.43619 0.12984 3.48552 2.83124 27 - -
|
|
1339 1.38629 1.38629 1.38629 1.38629
|
|
1340 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1341 28 3.43619 0.12984 3.48552 2.83124 28 - -
|
|
1342 1.38629 1.38629 1.38629 1.38629
|
|
1343 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1344 29 3.43619 0.12984 3.48552 2.83124 29 - -
|
|
1345 1.38629 1.38629 1.38629 1.38629
|
|
1346 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1347 30 2.94939 3.59047 0.11686 3.49542 30 - -
|
|
1348 1.38629 1.38629 1.38629 1.38629
|
|
1349 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1350 31 3.43619 0.12984 3.48552 2.83124 31 - -
|
|
1351 1.38629 1.38629 1.38629 1.38629
|
|
1352 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1353 32 3.09131 2.59686 3.13936 0.17824 32 - -
|
|
1354 1.38629 1.38629 1.38629 1.38629
|
|
1355 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1356 33 2.94939 3.59047 0.11686 3.49542 33 - -
|
|
1357 1.38629 1.38629 1.38629 1.38629
|
|
1358 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1359 34 0.14154 3.38294 2.80366 3.28486 34 - -
|
|
1360 1.38629 1.38629 1.38629 1.38629
|
|
1361 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1362 35 0.14154 3.38294 2.80366 3.28486 35 - -
|
|
1363 1.38629 1.38629 1.38629 1.38629
|
|
1364 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1365 36 3.09131 2.59686 3.13936 0.17824 36 - -
|
|
1366 1.38629 1.38629 1.38629 1.38629
|
|
1367 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1368 37 3.09131 2.59686 3.13936 0.17824 37 - -
|
|
1369 1.38629 1.38629 1.38629 1.38629
|
|
1370 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1371 38 3.09131 2.59686 3.13936 0.17824 38 - -
|
|
1372 1.38629 1.38629 1.38629 1.38629
|
|
1373 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1374 39 0.14154 3.38294 2.80366 3.28486 39 - -
|
|
1375 1.38629 1.38629 1.38629 1.38629
|
|
1376 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1377 40 0.14154 3.38294 2.80366 3.28486 40 - -
|
|
1378 1.38629 1.38629 1.38629 1.38629
|
|
1379 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1380 41 2.94939 3.59047 0.11686 3.49542 41 - -
|
|
1381 1.38629 1.38629 1.38629 1.38629
|
|
1382 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1383 42 3.43619 0.12984 3.48552 2.83124 42 - -
|
|
1384 1.38629 1.38629 1.38629 1.38629
|
|
1385 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1386 43 0.14154 3.38294 2.80366 3.28486 43 - -
|
|
1387 1.38629 1.38629 1.38629 1.38629
|
|
1388 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1389 44 3.09131 2.59686 3.13936 0.17824 44 - -
|
|
1390 1.38629 1.38629 1.38629 1.38629
|
|
1391 0.03683 4.01296 4.01296 1.46634 0.26236 1.09861 0.40547
|
|
1392 45 0.14154 3.38294 2.80366 3.28486 45 - -
|
|
1393 1.38629 1.38629 1.38629 1.38629
|
|
1394 0.01858 3.99472 * 1.46634 0.26236 0.00000 *
|
|
1395 //
|
|
1396 HMMER3/b [3.0 | March 2010]
|
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1397 NAME 1_SSU_Haptophyceae_1_SSU_end_long
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1398 LENG 45
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1399 ALPH DNA
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1400 RF no
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1401 CS no
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1402 MAP yes
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1403 DATE Sat Oct 8 23:07:22 2011
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1404 NSEQ 11
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1405 EFFN 3.225342
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1406 CKSUM 243674475
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1407 STATS LOCAL MSV -8.0048 0.71933
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1408 STATS LOCAL VITERBI -7.6830 0.71933
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1409 STATS LOCAL FORWARD -4.1089 0.71933
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1410 HMM A C G T
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1411 m->m m->i m->d i->m i->i d->m d->d
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1412 COMPO 1.27189 1.62644 1.24659 1.44567
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1413 1.38629 1.38629 1.38629 1.38629
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1414 0.03756 3.99367 3.99367 1.46634 0.26236 0.00000 *
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1415 1 0.14615 3.34859 2.78130 3.24727 1 - -
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1416 1.38629 1.38629 1.38629 1.38629
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1417 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1418 2 2.92530 3.55551 0.12075 3.45686 2 - -
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1419 1.38629 1.38629 1.38629 1.38629
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1420 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1421 3 3.05675 2.57485 3.10612 0.18390 3 - -
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1422 1.38629 1.38629 1.38629 1.38629
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1423 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1424 4 3.39657 0.13465 3.44756 2.80232 4 - -
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1425 1.38629 1.38629 1.38629 1.38629
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1426 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1427 5 2.92530 3.55551 0.12075 3.45686 5 - -
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1428 1.38629 1.38629 1.38629 1.38629
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1429 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1430 6 3.05675 2.57485 3.10612 0.18390 6 - -
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1431 1.38629 1.38629 1.38629 1.38629
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1432 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1433 7 0.14615 3.34859 2.78130 3.24727 7 - -
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1434 1.38629 1.38629 1.38629 1.38629
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1435 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1436 8 0.14615 3.34859 2.78130 3.24727 8 - -
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1437 1.38629 1.38629 1.38629 1.38629
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1438 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1439 9 3.39657 0.13465 3.44756 2.80232 9 - -
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1440 1.38629 1.38629 1.38629 1.38629
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1441 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1442 10 0.14615 3.34859 2.78130 3.24727 10 - -
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1443 1.38629 1.38629 1.38629 1.38629
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1444 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1445 11 0.14615 3.34859 2.78130 3.24727 11 - -
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1446 1.38629 1.38629 1.38629 1.38629
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1447 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1448 12 2.92530 3.55551 0.12075 3.45686 12 - -
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1449 1.38629 1.38629 1.38629 1.38629
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1450 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1451 13 2.92530 3.55551 0.12075 3.45686 13 - -
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1452 1.38629 1.38629 1.38629 1.38629
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1453 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1454 14 3.05675 2.57485 3.10612 0.18390 14 - -
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1455 1.38629 1.38629 1.38629 1.38629
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1456 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1457 15 3.05675 2.57485 3.10612 0.18390 15 - -
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1458 1.38629 1.38629 1.38629 1.38629
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1459 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1460 16 3.05675 2.57485 3.10612 0.18390 16 - -
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1461 1.38629 1.38629 1.38629 1.38629
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1462 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1463 17 3.39657 0.13465 3.44756 2.80232 17 - -
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1464 1.38629 1.38629 1.38629 1.38629
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1465 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1466 18 3.39657 0.13465 3.44756 2.80232 18 - -
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1467 1.38629 1.38629 1.38629 1.38629
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1468 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1469 19 2.92530 3.55551 0.12075 3.45686 19 - -
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1470 1.38629 1.38629 1.38629 1.38629
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1471 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1472 20 3.05675 2.57485 3.10612 0.18390 20 - -
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1473 1.38629 1.38629 1.38629 1.38629
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1474 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1475 21 0.14615 3.34859 2.78130 3.24727 21 - -
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1476 1.38629 1.38629 1.38629 1.38629
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1477 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1478 22 2.92530 3.55551 0.12075 3.45686 22 - -
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1479 1.38629 1.38629 1.38629 1.38629
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1480 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1481 23 2.92530 3.55551 0.12075 3.45686 23 - -
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1482 1.38629 1.38629 1.38629 1.38629
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1483 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1484 24 3.05675 2.57485 3.10612 0.18390 24 - -
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1485 1.38629 1.38629 1.38629 1.38629
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1486 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1487 25 2.92530 3.55551 0.12075 3.45686 25 - -
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1488 1.38629 1.38629 1.38629 1.38629
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1489 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1490 26 0.14615 3.34859 2.78130 3.24727 26 - -
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1491 1.38629 1.38629 1.38629 1.38629
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1492 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1493 27 0.14615 3.34859 2.78130 3.24727 27 - -
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1494 1.38629 1.38629 1.38629 1.38629
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1495 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1496 28 3.39657 0.13465 3.44756 2.80232 28 - -
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1497 1.38629 1.38629 1.38629 1.38629
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1498 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1499 29 3.39657 0.13465 3.44756 2.80232 29 - -
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1500 1.38629 1.38629 1.38629 1.38629
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1501 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1502 30 3.05675 2.57485 3.10612 0.18390 30 - -
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1503 1.38629 1.38629 1.38629 1.38629
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1504 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1505 31 2.92530 3.55551 0.12075 3.45686 31 - -
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1506 1.38629 1.38629 1.38629 1.38629
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1507 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1508 32 3.39657 0.13465 3.44756 2.80232 32 - -
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1509 1.38629 1.38629 1.38629 1.38629
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1510 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1511 33 2.92530 3.55551 0.12075 3.45686 33 - -
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1512 1.38629 1.38629 1.38629 1.38629
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1513 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1514 34 2.92530 3.55551 0.12075 3.45686 34 - -
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1515 1.38629 1.38629 1.38629 1.38629
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1516 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1517 35 0.14615 3.34859 2.78130 3.24727 35 - -
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1518 1.38629 1.38629 1.38629 1.38629
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1519 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1520 36 0.14615 3.34859 2.78130 3.24727 36 - -
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1521 1.38629 1.38629 1.38629 1.38629
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1522 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1523 37 2.92530 3.55551 0.12075 3.45686 37 - -
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1524 1.38629 1.38629 1.38629 1.38629
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1525 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1526 38 2.92530 3.55551 0.12075 3.45686 38 - -
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1527 1.38629 1.38629 1.38629 1.38629
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1528 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1529 39 0.14615 3.34859 2.78130 3.24727 39 - -
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1530 1.38629 1.38629 1.38629 1.38629
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1531 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1532 40 3.05675 2.57485 3.10612 0.18390 40 - -
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1533 1.38629 1.38629 1.38629 1.38629
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1534 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1535 41 3.39657 0.13465 3.44756 2.80232 41 - -
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1536 1.38629 1.38629 1.38629 1.38629
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1537 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1538 42 0.14615 3.34859 2.78130 3.24727 42 - -
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1539 1.38629 1.38629 1.38629 1.38629
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1540 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1541 43 3.05675 2.57485 3.10612 0.18390 43 - -
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1542 1.38629 1.38629 1.38629 1.38629
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1543 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1544 44 3.05675 2.57485 3.10612 0.18390 44 - -
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1545 1.38629 1.38629 1.38629 1.38629
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1546 0.03756 3.99367 3.99367 1.46634 0.26236 1.09861 0.40547
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1547 45 0.14615 3.34859 2.78130 3.24727 45 - -
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1548 1.38629 1.38629 1.38629 1.38629
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1549 0.01896 3.97506 * 1.46634 0.26236 0.00000 *
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1550 //
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