Mercurial > repos > okorol > itsx

comparison ITSx_db/HMMs/G.hmm @ 0:f82c70f54bd7 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author okorol
date Tue, 24 Mar 2015 12:02:48 -0400
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:f82c70f54bd7
1 HMMER3/b [3.0 | March 2010]
2 NAME 3_End_Chlorophyta_58S_end_eight_long
3 LENG 45
4 ALPH DNA
5 RF no
6 CS no
7 MAP yes
8 DATE Sat Jan 28 01:06:57 2012
9 NSEQ 8
10 EFFN 3.128906
11 CKSUM 1519682346
12 STATS LOCAL MSV -8.1109 0.71934
13 STATS LOCAL VITERBI -7.7889 0.71934
14 STATS LOCAL FORWARD -3.6308 0.71934
15 HMM A C G T
16 m->m m->i m->d i->m i->i d->m d->d
17 COMPO 2.06483 0.95712 1.26884 1.57019
18 1.38629 1.38629 1.38629 1.38629
19 0.03825 3.97573 3.97573 1.46634 0.26236 0.00000 *
20 1 3.35912 0.13939 3.41165 2.77481 1 - -
21 1.38629 1.38629 1.38629 1.38629
22 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
23 2 2.90228 3.52232 0.12458 3.42031 2 - -
24 1.38629 1.38629 1.38629 1.38629
25 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
26 3 3.35912 0.13939 3.41165 2.77481 3 - -
27 1.38629 1.38629 1.38629 1.38629
28 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
29 4 3.35912 0.13939 3.41165 2.77481 4 - -
30 1.38629 1.38629 1.38629 1.38629
31 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
32 5 3.35912 0.13939 3.41165 2.77481 5 - -
33 1.38629 1.38629 1.38629 1.38629
34 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
35 6 3.35912 0.13939 3.41165 2.77481 6 - -
36 1.38629 1.38629 1.38629 1.38629
37 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
38 7 0.15066 3.31617 2.76009 3.21184 7 - -
39 1.38629 1.38629 1.38629 1.38629
40 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
41 8 3.35912 0.13939 3.41165 2.77481 8 - -
42 1.38629 1.38629 1.38629 1.38629
43 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
44 9 2.90228 3.52232 0.12458 3.42031 9 - -
45 1.38629 1.38629 1.38629 1.38629
46 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
47 10 2.90228 3.52232 0.12458 3.42031 10 - -
48 1.38629 1.38629 1.38629 1.38629
49 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
50 11 3.35912 0.13939 3.41165 2.77481 11 - -
51 1.38629 1.38629 1.38629 1.38629
52 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
53 12 3.35912 0.13939 3.41165 2.77481 12 - -
54 1.38629 1.38629 1.38629 1.38629
55 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
56 13 3.02437 2.55419 3.07496 0.18939 13 - -
57 1.38629 1.38629 1.38629 1.38629
58 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
59 14 3.35912 0.13939 3.41165 2.77481 14 - -
60 1.38629 1.38629 1.38629 1.38629
61 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
62 15 2.90228 3.52232 0.12458 3.42031 15 - -
63 1.38629 1.38629 1.38629 1.38629
64 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
65 16 2.90228 3.52232 0.12458 3.42031 16 - -
66 1.38629 1.38629 1.38629 1.38629
67 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
68 17 3.35912 0.13939 3.41165 2.77481 17 - -
69 1.38629 1.38629 1.38629 1.38629
70 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
71 18 3.35912 0.13939 3.41165 2.77481 18 - -
72 1.38629 1.38629 1.38629 1.38629
73 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
74 19 3.35912 0.13939 3.41165 2.77481 19 - -
75 1.38629 1.38629 1.38629 1.38629
76 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
77 20 0.15066 3.31617 2.76009 3.21184 20 - -
78 1.38629 1.38629 1.38629 1.38629
79 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
80 21 2.90228 3.52232 0.12458 3.42031 21 - -
81 1.38629 1.38629 1.38629 1.38629
82 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
83 22 2.90228 3.52232 0.12458 3.42031 22 - -
84 1.38629 1.38629 1.38629 1.38629
85 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
86 23 2.90228 3.52232 0.12458 3.42031 23 - -
87 1.38629 1.38629 1.38629 1.38629
88 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
89 24 3.35912 0.13939 3.41165 2.77481 24 - -
90 1.38629 1.38629 1.38629 1.38629
91 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
92 25 0.15066 3.31617 2.76009 3.21184 25 - -
93 1.38629 1.38629 1.38629 1.38629
94 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
95 26 3.02437 2.55419 3.07496 0.18939 26 - -
96 1.38629 1.38629 1.38629 1.38629
97 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
98 27 2.90228 3.52232 0.12458 3.42031 27 - -
99 1.38629 1.38629 1.38629 1.38629
100 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
101 28 3.02437 2.55419 3.07496 0.18939 28 - -
102 1.38629 1.38629 1.38629 1.38629
103 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
104 29 3.35912 0.13939 3.41165 2.77481 29 - -
105 1.38629 1.38629 1.38629 1.38629
106 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
107 30 3.02437 2.55419 3.07496 0.18939 30 - -
108 1.38629 1.38629 1.38629 1.38629
109 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
110 31 2.90228 3.52232 0.12458 3.42031 31 - -
111 1.38629 1.38629 1.38629 1.38629
112 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
113 32 3.35912 0.13939 3.41165 2.77481 32 - -
114 1.38629 1.38629 1.38629 1.38629
115 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
116 33 3.35912 0.13939 3.41165 2.77481 33 - -
117 1.38629 1.38629 1.38629 1.38629
118 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
119 34 3.02437 2.55419 3.07496 0.18939 34 - -
120 1.38629 1.38629 1.38629 1.38629
121 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
122 35 3.35912 0.13939 3.41165 2.77481 35 - -
123 1.38629 1.38629 1.38629 1.38629
124 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
125 36 0.15066 3.31617 2.76009 3.21184 36 - -
126 1.38629 1.38629 1.38629 1.38629
127 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
128 37 2.90228 3.52232 0.12458 3.42031 37 - -
129 1.38629 1.38629 1.38629 1.38629
130 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
131 38 3.35912 0.13939 3.41165 2.77481 38 - -
132 1.38629 1.38629 1.38629 1.38629
133 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
134 39 2.90228 3.52232 0.12458 3.42031 39 - -
135 1.38629 1.38629 1.38629 1.38629
136 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
137 40 3.02437 2.55419 3.07496 0.18939 40 - -
138 1.38629 1.38629 1.38629 1.38629
139 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
140 41 3.35912 0.13939 3.41165 2.77481 41 - -
141 1.38629 1.38629 1.38629 1.38629
142 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
143 42 3.02437 2.55419 3.07496 0.18939 42 - -
144 1.38629 1.38629 1.38629 1.38629
145 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
146 43 2.90228 3.52232 0.12458 3.42031 43 - -
147 1.38629 1.38629 1.38629 1.38629
148 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
149 44 3.02437 2.55419 3.07496 0.18939 44 - -
150 1.38629 1.38629 1.38629 1.38629
151 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
152 45 3.02437 2.55419 3.07496 0.18939 45 - -
153 1.38629 1.38629 1.38629 1.38629
154 0.01931 3.95679 * 1.46634 0.26236 0.00000 *
155 //
156 HMMER3/b [3.0 | March 2010]
157 NAME 3_End_Chlorophyta_58S_end_elevena_long
158 LENG 45
159 ALPH DNA
160 RF no
161 CS no
162 MAP yes
163 DATE Sat Jan 28 01:08:11 2012
164 NSEQ 2
165 EFFN 2.000000
166 CKSUM 3760142231
167 STATS LOCAL MSV -7.7134 0.72708
168 STATS LOCAL VITERBI -8.1835 0.72708
169 STATS LOCAL FORWARD -2.9945 0.72708
170 HMM A C G T
171 m->m m->i m->d i->m i->i d->m d->d
172 COMPO 1.66783 1.20179 1.12165 1.68770
173 1.38629 1.38629 1.38629 1.38629
174 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
175 1 2.53331 3.02441 0.20344 2.88069 1 - -
176 1.38629 1.38629 1.38629 1.38629
177 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
178 2 2.81865 0.23582 2.88868 2.35662 2 - -
179 1.38629 1.38629 1.38629 1.38629
180 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
181 3 2.53331 3.02441 0.20344 2.88069 3 - -
182 1.38629 1.38629 1.38629 1.38629
183 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
184 4 2.81865 0.23582 2.88868 2.35662 4 - -
185 1.38629 1.38629 1.38629 1.38629
186 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
187 5 2.81865 0.23582 2.88868 2.35662 5 - -
188 1.38629 1.38629 1.38629 1.38629
189 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
190 6 2.81865 0.23582 2.88868 2.35662 6 - -
191 1.38629 1.38629 1.38629 1.38629
192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
193 7 2.53331 3.02441 0.20344 2.88069 7 - -
194 1.38629 1.38629 1.38629 1.38629
195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
196 8 0.23862 2.84929 2.43386 2.70756 8 - -
197 1.38629 1.38629 1.38629 1.38629
198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
199 9 2.53331 3.02441 0.20344 2.88069 9 - -
200 1.38629 1.38629 1.38629 1.38629
201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
202 10 2.53331 3.02441 0.20344 2.88069 10 - -
203 1.38629 1.38629 1.38629 1.38629
204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
205 11 2.81865 0.23582 2.88868 2.35662 11 - -
206 1.38629 1.38629 1.38629 1.38629
207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
208 12 2.57915 2.25909 2.64442 0.28946 12 - -
209 1.38629 1.38629 1.38629 1.38629
210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
211 13 2.57915 2.25909 2.64442 0.28946 13 - -
212 1.38629 1.38629 1.38629 1.38629
213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
214 14 0.23862 2.84929 2.43386 2.70756 14 - -
215 1.38629 1.38629 1.38629 1.38629
216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
217 15 2.53331 3.02441 0.20344 2.88069 15 - -
218 1.38629 1.38629 1.38629 1.38629
219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
220 16 2.53331 3.02441 0.20344 2.88069 16 - -
221 1.38629 1.38629 1.38629 1.38629
222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
223 17 2.81865 0.23582 2.88868 2.35662 17 - -
224 1.38629 1.38629 1.38629 1.38629
225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
226 18 2.81865 0.23582 2.88868 2.35662 18 - -
227 1.38629 1.38629 1.38629 1.38629
228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
229 19 0.23862 2.84929 2.43386 2.70756 19 - -
230 1.38629 1.38629 1.38629 1.38629
231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
232 20 0.23862 2.84929 2.43386 2.70756 20 - -
233 1.38629 1.38629 1.38629 1.38629
234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
235 21 2.53331 3.02441 0.20344 2.88069 21 - -
236 1.38629 1.38629 1.38629 1.38629
237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
238 22 2.53331 3.02441 0.20344 2.88069 22 - -
239 1.38629 1.38629 1.38629 1.38629
240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
241 23 2.53331 3.02441 0.20344 2.88069 23 - -
242 1.38629 1.38629 1.38629 1.38629
243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
244 24 2.81865 0.23582 2.88868 2.35662 24 - -
245 1.38629 1.38629 1.38629 1.38629
246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
247 25 0.23862 2.84929 2.43386 2.70756 25 - -
248 1.38629 1.38629 1.38629 1.38629
249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
250 26 2.57915 2.25909 2.64442 0.28946 26 - -
251 1.38629 1.38629 1.38629 1.38629
252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
253 27 2.53331 3.02441 0.20344 2.88069 27 - -
254 1.38629 1.38629 1.38629 1.38629
255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
256 28 2.81865 0.23582 2.88868 2.35662 28 - -
257 1.38629 1.38629 1.38629 1.38629
258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
259 29 2.81865 0.23582 2.88868 2.35662 29 - -
260 1.38629 1.38629 1.38629 1.38629
261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
262 30 2.57915 2.25909 2.64442 0.28946 30 - -
263 1.38629 1.38629 1.38629 1.38629
264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
265 31 2.53331 3.02441 0.20344 2.88069 31 - -
266 1.38629 1.38629 1.38629 1.38629
267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
268 32 2.53331 3.02441 0.20344 2.88069 32 - -
269 1.38629 1.38629 1.38629 1.38629
270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
271 33 2.81865 0.23582 2.88868 2.35662 33 - -
272 1.38629 1.38629 1.38629 1.38629
273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
274 34 2.57915 2.25909 2.64442 0.28946 34 - -
275 1.38629 1.38629 1.38629 1.38629
276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
277 35 2.81865 0.23582 2.88868 2.35662 35 - -
278 1.38629 1.38629 1.38629 1.38629
279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
280 36 0.23862 2.84929 2.43386 2.70756 36 - -
281 1.38629 1.38629 1.38629 1.38629
282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
283 37 2.53331 3.02441 0.20344 2.88069 37 - -
284 1.38629 1.38629 1.38629 1.38629
285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
286 38 2.81865 0.23582 2.88868 2.35662 38 - -
287 1.38629 1.38629 1.38629 1.38629
288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
289 39 2.53331 3.02441 0.20344 2.88069 39 - -
290 1.38629 1.38629 1.38629 1.38629
291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
292 40 2.57915 2.25909 2.64442 0.28946 40 - -
293 1.38629 1.38629 1.38629 1.38629
294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
295 41 2.81865 0.23582 2.88868 2.35662 41 - -
296 1.38629 1.38629 1.38629 1.38629
297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
298 42 2.53331 3.02441 0.20344 2.88069 42 - -
299 1.38629 1.38629 1.38629 1.38629
300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
301 43 2.57915 2.25909 2.64442 0.28946 43 - -
302 1.38629 1.38629 1.38629 1.38629
303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
304 44 2.81865 0.23582 2.88868 2.35662 44 - -
305 1.38629 1.38629 1.38629 1.38629
306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
307 45 0.23862 2.84929 2.43386 2.70756 45 - -
308 1.38629 1.38629 1.38629 1.38629
309 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
310 //
311 HMMER3/b [3.0 | March 2010]
312 NAME 3_End_Chlorophyta_58S_end_elevenb_long
313 LENG 45
314 ALPH DNA
315 RF no
316 CS no
317 MAP yes
318 DATE Sat Jan 28 01:08:17 2012
319 NSEQ 4
320 EFFN 3.167969
321 CKSUM 1059924513
322 STATS LOCAL MSV -8.1569 0.71931
323 STATS LOCAL VITERBI -7.6314 0.71931
324 STATS LOCAL FORWARD -3.5156 0.71931
325 HMM A C G T
326 m->m m->i m->d i->m i->i d->m d->d
327 COMPO 1.71647 1.25486 0.99125 1.80746
328 1.38629 1.38629 1.38629 1.38629
329 0.03797 3.98303 3.98303 1.46634 0.26236 0.00000 *
330 1 2.91173 3.53592 0.12299 3.43528 1 - -
331 1.38629 1.38629 1.38629 1.38629
332 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
333 2 3.37444 0.13743 3.42635 2.78609 2 - -
334 1.38629 1.38629 1.38629 1.38629
335 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
336 3 2.91173 3.53592 0.12299 3.43528 3 - -
337 1.38629 1.38629 1.38629 1.38629
338 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
339 4 3.37444 0.13743 3.42635 2.78609 4 - -
340 1.38629 1.38629 1.38629 1.38629
341 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
342 5 3.37444 0.13743 3.42635 2.78609 5 - -
343 1.38629 1.38629 1.38629 1.38629
344 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
345 6 3.37444 0.13743 3.42635 2.78609 6 - -
346 1.38629 1.38629 1.38629 1.38629
347 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
348 7 2.91173 3.53592 0.12299 3.43528 7 - -
349 1.38629 1.38629 1.38629 1.38629
350 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
351 8 0.14880 3.32943 2.76878 3.22633 8 - -
352 1.38629 1.38629 1.38629 1.38629
353 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
354 9 2.91173 3.53592 0.12299 3.43528 9 - -
355 1.38629 1.38629 1.38629 1.38629
356 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
357 10 2.91173 3.53592 0.12299 3.43528 10 - -
358 1.38629 1.38629 1.38629 1.38629
359 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
360 11 3.03758 2.56263 3.08768 0.18713 11 - -
361 1.38629 1.38629 1.38629 1.38629
362 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
363 12 2.37754 0.96254 2.45003 0.82323 12 - -
364 1.38629 1.38629 1.38629 1.38629
365 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
366 13 3.03758 2.56263 3.08768 0.18713 13 - -
367 1.38629 1.38629 1.38629 1.38629
368 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
369 14 0.14880 3.32943 2.76878 3.22633 14 - -
370 1.38629 1.38629 1.38629 1.38629
371 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
372 15 2.91173 3.53592 0.12299 3.43528 15 - -
373 1.38629 1.38629 1.38629 1.38629
374 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
375 16 2.91173 3.53592 0.12299 3.43528 16 - -
376 1.38629 1.38629 1.38629 1.38629
377 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
378 17 3.37444 0.13743 3.42635 2.78609 17 - -
379 1.38629 1.38629 1.38629 1.38629
380 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
381 18 3.37444 0.13743 3.42635 2.78609 18 - -
382 1.38629 1.38629 1.38629 1.38629
383 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
384 19 0.14880 3.32943 2.76878 3.22633 19 - -
385 1.38629 1.38629 1.38629 1.38629
386 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
387 20 0.14880 3.32943 2.76878 3.22633 20 - -
388 1.38629 1.38629 1.38629 1.38629
389 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
390 21 2.91173 3.53592 0.12299 3.43528 21 - -
391 1.38629 1.38629 1.38629 1.38629
392 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
393 22 2.91173 3.53592 0.12299 3.43528 22 - -
394 1.38629 1.38629 1.38629 1.38629
395 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
396 23 2.91173 3.53592 0.12299 3.43528 23 - -
397 1.38629 1.38629 1.38629 1.38629
398 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
399 24 3.37444 0.13743 3.42635 2.78609 24 - -
400 1.38629 1.38629 1.38629 1.38629
401 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
402 25 0.14880 3.32943 2.76878 3.22633 25 - -
403 1.38629 1.38629 1.38629 1.38629
404 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
405 26 3.03758 2.56263 3.08768 0.18713 26 - -
406 1.38629 1.38629 1.38629 1.38629
407 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
408 27 2.91173 3.53592 0.12299 3.43528 27 - -
409 1.38629 1.38629 1.38629 1.38629
410 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
411 28 2.91173 3.53592 0.12299 3.43528 28 - -
412 1.38629 1.38629 1.38629 1.38629
413 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
414 29 3.37444 0.13743 3.42635 2.78609 29 - -
415 1.38629 1.38629 1.38629 1.38629
416 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
417 30 3.03758 2.56263 3.08768 0.18713 30 - -
418 1.38629 1.38629 1.38629 1.38629
419 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
420 31 2.91173 3.53592 0.12299 3.43528 31 - -
421 1.38629 1.38629 1.38629 1.38629
422 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
423 32 2.91173 3.53592 0.12299 3.43528 32 - -
424 1.38629 1.38629 1.38629 1.38629
425 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
426 33 3.37444 0.13743 3.42635 2.78609 33 - -
427 1.38629 1.38629 1.38629 1.38629
428 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
429 34 3.03758 2.56263 3.08768 0.18713 34 - -
430 1.38629 1.38629 1.38629 1.38629
431 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
432 35 3.37444 0.13743 3.42635 2.78609 35 - -
433 1.38629 1.38629 1.38629 1.38629
434 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
435 36 0.14880 3.32943 2.76878 3.22633 36 - -
436 1.38629 1.38629 1.38629 1.38629
437 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
438 37 2.91173 3.53592 0.12299 3.43528 37 - -
439 1.38629 1.38629 1.38629 1.38629
440 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
441 38 3.37444 0.13743 3.42635 2.78609 38 - -
442 1.38629 1.38629 1.38629 1.38629
443 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
444 39 2.91173 3.53592 0.12299 3.43528 39 - -
445 1.38629 1.38629 1.38629 1.38629
446 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
447 40 3.03758 2.56263 3.08768 0.18713 40 - -
448 1.38629 1.38629 1.38629 1.38629
449 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
450 41 3.37444 0.13743 3.42635 2.78609 41 - -
451 1.38629 1.38629 1.38629 1.38629
452 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
453 42 2.91173 3.53592 0.12299 3.43528 42 - -
454 1.38629 1.38629 1.38629 1.38629
455 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
456 43 0.14880 3.32943 2.76878 3.22633 43 - -
457 1.38629 1.38629 1.38629 1.38629
458 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
459 44 3.37444 0.13743 3.42635 2.78609 44 - -
460 1.38629 1.38629 1.38629 1.38629
461 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
462 45 2.91173 3.53592 0.12299 3.43528 45 - -
463 1.38629 1.38629 1.38629 1.38629
464 0.01917 3.96423 * 1.46634 0.26236 0.00000 *
465 //
466 HMMER3/b [3.0 | March 2010]
467 NAME 3_End_Chlorophyta_58S_end_fifteen_long
468 LENG 45
469 ALPH DNA
470 RF no
471 CS no
472 MAP yes
473 DATE Sat Jan 28 01:09:22 2012
474 NSEQ 2
475 EFFN 2.000000
476 CKSUM 3206328775
477 STATS LOCAL MSV -7.4469 0.72804
478 STATS LOCAL VITERBI -8.2249 0.72804
479 STATS LOCAL FORWARD -3.6506 0.72804
480 HMM A C G T
481 m->m m->i m->d i->m i->i d->m d->d
482 COMPO 1.66019 1.45155 1.21279 1.27898
483 1.38629 1.38629 1.38629 1.38629
484 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
485 1 2.53331 3.02441 0.20344 2.88069 1 - -
486 1.38629 1.38629 1.38629 1.38629
487 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
488 2 2.81865 0.23582 2.88868 2.35662 2 - -
489 1.38629 1.38629 1.38629 1.38629
490 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
491 3 2.53331 3.02441 0.20344 2.88069 3 - -
492 1.38629 1.38629 1.38629 1.38629
493 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
494 4 2.81865 0.23582 2.88868 2.35662 4 - -
495 1.38629 1.38629 1.38629 1.38629
496 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
497 5 2.81865 0.23582 2.88868 2.35662 5 - -
498 1.38629 1.38629 1.38629 1.38629
499 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
500 6 2.81865 0.23582 2.88868 2.35662 6 - -
501 1.38629 1.38629 1.38629 1.38629
502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
503 7 2.57915 2.25909 2.64442 0.28946 7 - -
504 1.38629 1.38629 1.38629 1.38629
505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
506 8 2.57915 2.25909 2.64442 0.28946 8 - -
507 1.38629 1.38629 1.38629 1.38629
508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
509 9 2.57915 2.25909 2.64442 0.28946 9 - -
510 1.38629 1.38629 1.38629 1.38629
511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
512 10 2.53331 3.02441 0.20344 2.88069 10 - -
513 1.38629 1.38629 1.38629 1.38629
514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
515 11 2.53331 3.02441 0.20344 2.88069 11 - -
516 1.38629 1.38629 1.38629 1.38629
517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
518 12 2.57915 2.25909 2.64442 0.28946 12 - -
519 1.38629 1.38629 1.38629 1.38629
520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
521 13 0.23862 2.84929 2.43386 2.70756 13 - -
522 1.38629 1.38629 1.38629 1.38629
523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
524 14 2.57915 2.25909 2.64442 0.28946 14 - -
525 1.38629 1.38629 1.38629 1.38629
526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
527 15 2.57915 2.25909 2.64442 0.28946 15 - -
528 1.38629 1.38629 1.38629 1.38629
529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
530 16 2.81865 0.23582 2.88868 2.35662 16 - -
531 1.38629 1.38629 1.38629 1.38629
532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
533 17 2.81865 0.23582 2.88868 2.35662 17 - -
534 1.38629 1.38629 1.38629 1.38629
535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
536 18 2.53331 3.02441 0.20344 2.88069 18 - -
537 1.38629 1.38629 1.38629 1.38629
538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
539 19 0.23862 2.84929 2.43386 2.70756 19 - -
540 1.38629 1.38629 1.38629 1.38629
541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
542 20 0.23862 2.84929 2.43386 2.70756 20 - -
543 1.38629 1.38629 1.38629 1.38629
544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
545 21 2.53331 3.02441 0.20344 2.88069 21 - -
546 1.38629 1.38629 1.38629 1.38629
547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
548 22 2.53331 3.02441 0.20344 2.88069 22 - -
549 1.38629 1.38629 1.38629 1.38629
550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
551 23 2.53331 3.02441 0.20344 2.88069 23 - -
552 1.38629 1.38629 1.38629 1.38629
553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
554 24 2.81865 0.23582 2.88868 2.35662 24 - -
555 1.38629 1.38629 1.38629 1.38629
556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
557 25 0.23862 2.84929 2.43386 2.70756 25 - -
558 1.38629 1.38629 1.38629 1.38629
559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
560 26 2.57915 2.25909 2.64442 0.28946 26 - -
561 1.38629 1.38629 1.38629 1.38629
562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
563 27 2.53331 3.02441 0.20344 2.88069 27 - -
564 1.38629 1.38629 1.38629 1.38629
565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
566 28 2.81865 0.23582 2.88868 2.35662 28 - -
567 1.38629 1.38629 1.38629 1.38629
568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
569 29 2.81865 0.23582 2.88868 2.35662 29 - -
570 1.38629 1.38629 1.38629 1.38629
571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
572 30 2.57915 2.25909 2.64442 0.28946 30 - -
573 1.38629 1.38629 1.38629 1.38629
574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
575 31 2.53331 3.02441 0.20344 2.88069 31 - -
576 1.38629 1.38629 1.38629 1.38629
577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
578 32 2.57915 2.25909 2.64442 0.28946 32 - -
579 1.38629 1.38629 1.38629 1.38629
580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
581 33 2.57915 2.25909 2.64442 0.28946 33 - -
582 1.38629 1.38629 1.38629 1.38629
583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
584 34 2.57915 2.25909 2.64442 0.28946 34 - -
585 1.38629 1.38629 1.38629 1.38629
586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
587 35 2.53331 3.02441 0.20344 2.88069 35 - -
588 1.38629 1.38629 1.38629 1.38629
589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
590 36 0.23862 2.84929 2.43386 2.70756 36 - -
591 1.38629 1.38629 1.38629 1.38629
592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
593 37 2.53331 3.02441 0.20344 2.88069 37 - -
594 1.38629 1.38629 1.38629 1.38629
595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
596 38 2.57915 2.25909 2.64442 0.28946 38 - -
597 1.38629 1.38629 1.38629 1.38629
598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
599 39 2.53331 3.02441 0.20344 2.88069 39 - -
600 1.38629 1.38629 1.38629 1.38629
601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
602 40 2.57915 2.25909 2.64442 0.28946 40 - -
603 1.38629 1.38629 1.38629 1.38629
604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
605 41 2.81865 0.23582 2.88868 2.35662 41 - -
606 1.38629 1.38629 1.38629 1.38629
607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
608 42 0.23862 2.84929 2.43386 2.70756 42 - -
609 1.38629 1.38629 1.38629 1.38629
610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
611 43 2.57915 2.25909 2.64442 0.28946 43 - -
612 1.38629 1.38629 1.38629 1.38629
613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
614 44 2.53331 3.02441 0.20344 2.88069 44 - -
615 1.38629 1.38629 1.38629 1.38629
616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
617 45 0.23862 2.84929 2.43386 2.70756 45 - -
618 1.38629 1.38629 1.38629 1.38629
619 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
620 //
621 HMMER3/b [3.0 | March 2010]
622 NAME 3_End_Chlorophyta_58S_end_five_long
623 LENG 45
624 ALPH DNA
625 RF no
626 CS no
627 MAP yes
628 DATE Sat Jan 28 01:06:30 2012
629 NSEQ 6
630 EFFN 3.219727
631 CKSUM 399550701
632 STATS LOCAL MSV -8.3017 0.71932
633 STATS LOCAL VITERBI -7.6964 0.71932
634 STATS LOCAL FORWARD -3.8371 0.71932
635 HMM A C G T
636 m->m m->i m->d i->m i->i d->m d->d
637 COMPO 1.66847 1.15405 1.18562 1.65782
638 1.38629 1.38629 1.38629 1.38629
639 0.03760 3.99263 3.99263 1.46634 0.26236 0.00000 *
640 1 2.92399 3.55362 0.12096 3.45477 1 - -
641 1.38629 1.38629 1.38629 1.38629
642 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
643 2 3.39443 0.13492 3.44551 2.80075 2 - -
644 1.38629 1.38629 1.38629 1.38629
645 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
646 3 2.92399 3.55362 0.12096 3.45477 3 - -
647 1.38629 1.38629 1.38629 1.38629
648 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
649 4 2.92399 3.55362 0.12096 3.45477 4 - -
650 1.38629 1.38629 1.38629 1.38629
651 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
652 5 3.05488 2.57367 3.10432 0.18421 5 - -
653 1.38629 1.38629 1.38629 1.38629
654 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
655 6 3.39443 0.13492 3.44551 2.80075 6 - -
656 1.38629 1.38629 1.38629 1.38629
657 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
658 7 2.92399 3.55362 0.12096 3.45477 7 - -
659 1.38629 1.38629 1.38629 1.38629
660 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
661 8 0.14640 3.34673 2.78009 3.24524 8 - -
662 1.38629 1.38629 1.38629 1.38629
663 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
664 9 2.92399 3.55362 0.12096 3.45477 9 - -
665 1.38629 1.38629 1.38629 1.38629
666 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
667 10 2.92399 3.55362 0.12096 3.45477 10 - -
668 1.38629 1.38629 1.38629 1.38629
669 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
670 11 3.39443 0.13492 3.44551 2.80075 11 - -
671 1.38629 1.38629 1.38629 1.38629
672 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
673 12 3.05488 2.57367 3.10432 0.18421 12 - -
674 1.38629 1.38629 1.38629 1.38629
675 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
676 13 3.05488 2.57367 3.10432 0.18421 13 - -
677 1.38629 1.38629 1.38629 1.38629
678 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
679 14 3.39443 0.13492 3.44551 2.80075 14 - -
680 1.38629 1.38629 1.38629 1.38629
681 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
682 15 2.92399 3.55362 0.12096 3.45477 15 - -
683 1.38629 1.38629 1.38629 1.38629
684 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
685 16 2.92399 3.55362 0.12096 3.45477 16 - -
686 1.38629 1.38629 1.38629 1.38629
687 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
688 17 3.39443 0.13492 3.44551 2.80075 17 - -
689 1.38629 1.38629 1.38629 1.38629
690 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
691 18 3.39443 0.13492 3.44551 2.80075 18 - -
692 1.38629 1.38629 1.38629 1.38629
693 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
694 19 0.52608 2.60866 1.38344 2.46821 19 - -
695 1.38629 1.38629 1.38629 1.38629
696 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
697 20 0.14640 3.34673 2.78009 3.24524 20 - -
698 1.38629 1.38629 1.38629 1.38629
699 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
700 21 2.92399 3.55362 0.12096 3.45477 21 - -
701 1.38629 1.38629 1.38629 1.38629
702 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
703 22 0.14640 3.34673 2.78009 3.24524 22 - -
704 1.38629 1.38629 1.38629 1.38629
705 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
706 23 3.39443 0.13492 3.44551 2.80075 23 - -
707 1.38629 1.38629 1.38629 1.38629
708 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
709 24 3.39443 0.13492 3.44551 2.80075 24 - -
710 1.38629 1.38629 1.38629 1.38629
711 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
712 25 0.14640 3.34673 2.78009 3.24524 25 - -
713 1.38629 1.38629 1.38629 1.38629
714 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
715 26 3.05488 2.57367 3.10432 0.18421 26 - -
716 1.38629 1.38629 1.38629 1.38629
717 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
718 27 2.92399 3.55362 0.12096 3.45477 27 - -
719 1.38629 1.38629 1.38629 1.38629
720 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
721 28 3.39443 0.13492 3.44551 2.80075 28 - -
722 1.38629 1.38629 1.38629 1.38629
723 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
724 29 3.39443 0.13492 3.44551 2.80075 29 - -
725 1.38629 1.38629 1.38629 1.38629
726 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
727 30 3.05488 2.57367 3.10432 0.18421 30 - -
728 1.38629 1.38629 1.38629 1.38629
729 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
730 31 2.92399 3.55362 0.12096 3.45477 31 - -
731 1.38629 1.38629 1.38629 1.38629
732 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
733 32 3.39443 0.13492 3.44551 2.80075 32 - -
734 1.38629 1.38629 1.38629 1.38629
735 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
736 33 3.39443 0.13492 3.44551 2.80075 33 - -
737 1.38629 1.38629 1.38629 1.38629
738 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
739 34 3.05488 2.57367 3.10432 0.18421 34 - -
740 1.38629 1.38629 1.38629 1.38629
741 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
742 35 3.39443 0.13492 3.44551 2.80075 35 - -
743 1.38629 1.38629 1.38629 1.38629
744 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
745 36 0.14640 3.34673 2.78009 3.24524 36 - -
746 1.38629 1.38629 1.38629 1.38629
747 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
748 37 2.92399 3.55362 0.12096 3.45477 37 - -
749 1.38629 1.38629 1.38629 1.38629
750 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
751 38 3.39443 0.13492 3.44551 2.80075 38 - -
752 1.38629 1.38629 1.38629 1.38629
753 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
754 39 2.92399 3.55362 0.12096 3.45477 39 - -
755 1.38629 1.38629 1.38629 1.38629
756 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
757 40 3.05488 2.57367 3.10432 0.18421 40 - -
758 1.38629 1.38629 1.38629 1.38629
759 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
760 41 3.39443 0.13492 3.44551 2.80075 41 - -
761 1.38629 1.38629 1.38629 1.38629
762 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
763 42 2.92399 3.55362 0.12096 3.45477 42 - -
764 1.38629 1.38629 1.38629 1.38629
765 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
766 43 3.05488 2.57367 3.10432 0.18421 43 - -
767 1.38629 1.38629 1.38629 1.38629
768 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
769 44 0.14640 3.34673 2.78009 3.24524 44 - -
770 1.38629 1.38629 1.38629 1.38629
771 0.03760 3.99263 3.99263 1.46634 0.26236 1.09861 0.40547
772 45 0.14640 3.34673 2.78009 3.24524 45 - -
773 1.38629 1.38629 1.38629 1.38629
774 0.01898 3.97401 * 1.46634 0.26236 0.00000 *
775 //
776 HMMER3/b [3.0 | March 2010]
777 NAME 3_End_Chlorophyta_58S_end_foura_long
778 LENG 45
779 ALPH DNA
780 RF no
781 CS no
782 MAP yes
783 DATE Sat Jan 28 01:05:16 2012
784 NSEQ 52
785 EFFN 3.449951
786 CKSUM 881486621
787 STATS LOCAL MSV -7.1698 0.71931
788 STATS LOCAL VITERBI -7.5850 0.71931
789 STATS LOCAL FORWARD -3.9589 0.71931
790 HMM A C G T
791 m->m m->i m->d i->m i->i d->m d->d
792 COMPO 1.85538 1.20465 1.09209 1.56880
793 1.38629 1.38629 1.38629 1.38629
794 0.03604 4.03423 4.03423 1.46634 0.26236 0.00000 *
795 1 2.97515 3.62808 0.11284 3.53697 1 - -
796 1.38629 1.38629 1.38629 1.38629
797 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
798 2 3.47902 0.12486 3.52651 2.86230 2 - -
799 1.38629 1.38629 1.38629 1.38629
800 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
801 3 2.97515 3.62808 0.11284 3.53697 3 - -
802 1.38629 1.38629 1.38629 1.38629
803 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
804 4 3.25787 0.15953 3.10244 2.74811 4 - -
805 1.38629 1.38629 1.38629 1.38629
806 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
807 5 3.12906 2.62084 3.17566 0.17229 5 - -
808 1.38629 1.38629 1.38629 1.38629
809 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
810 6 3.30543 0.16321 3.35847 2.53684 6 - -
811 1.38629 1.38629 1.38629 1.38629
812 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
813 7 2.97515 3.62808 0.11284 3.53697 7 - -
814 1.38629 1.38629 1.38629 1.38629
815 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
816 8 0.26092 2.40692 2.57632 2.75649 8 - -
817 1.38629 1.38629 1.38629 1.38629
818 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
819 9 2.97515 3.62808 0.11284 3.53697 9 - -
820 1.38629 1.38629 1.38629 1.38629
821 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
822 10 2.97515 3.62808 0.11284 3.53697 10 - -
823 1.38629 1.38629 1.38629 1.38629
824 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
825 11 3.47902 0.12486 3.52651 2.86230 11 - -
826 1.38629 1.38629 1.38629 1.38629
827 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
828 12 2.96985 2.24779 3.02247 0.23020 12 - -
829 1.38629 1.38629 1.38629 1.38629
830 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
831 13 3.12906 2.62084 3.17566 0.17229 13 - -
832 1.38629 1.38629 1.38629 1.38629
833 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
834 14 3.47902 0.12486 3.52651 2.86230 14 - -
835 1.38629 1.38629 1.38629 1.38629
836 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
837 15 2.97515 3.62808 0.11284 3.53697 15 - -
838 1.38629 1.38629 1.38629 1.38629
839 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
840 16 2.97515 3.62808 0.11284 3.53697 16 - -
841 1.38629 1.38629 1.38629 1.38629
842 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
843 17 3.47902 0.12486 3.52651 2.86230 17 - -
844 1.38629 1.38629 1.38629 1.38629
845 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
846 18 3.26534 0.17321 3.31968 2.46875 18 - -
847 1.38629 1.38629 1.38629 1.38629
848 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
849 19 0.25046 3.05864 2.10513 2.94170 19 - -
850 1.38629 1.38629 1.38629 1.38629
851 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
852 20 0.13674 3.42016 2.82777 3.32563 20 - -
853 1.38629 1.38629 1.38629 1.38629
854 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
855 21 2.97515 3.62808 0.11284 3.53697 21 - -
856 1.38629 1.38629 1.38629 1.38629
857 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
858 22 0.17981 3.26289 2.47875 3.15944 22 - -
859 1.38629 1.38629 1.38629 1.38629
860 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
861 23 2.97515 3.62808 0.11284 3.53697 23 - -
862 1.38629 1.38629 1.38629 1.38629
863 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
864 24 3.47902 0.12486 3.52651 2.86230 24 - -
865 1.38629 1.38629 1.38629 1.38629
866 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
867 25 0.13674 3.42016 2.82777 3.32563 25 - -
868 1.38629 1.38629 1.38629 1.38629
869 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
870 26 3.12906 2.62084 3.17566 0.17229 26 - -
871 1.38629 1.38629 1.38629 1.38629
872 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
873 27 2.97515 3.62808 0.11284 3.53697 27 - -
874 1.38629 1.38629 1.38629 1.38629
875 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
876 28 3.12906 2.62084 3.17566 0.17229 28 - -
877 1.38629 1.38629 1.38629 1.38629
878 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
879 29 3.27834 0.16991 3.33226 2.49063 29 - -
880 1.38629 1.38629 1.38629 1.38629
881 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
882 30 3.12906 2.62084 3.17566 0.17229 30 - -
883 1.38629 1.38629 1.38629 1.38629
884 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
885 31 2.97515 3.62808 0.11284 3.53697 31 - -
886 1.38629 1.38629 1.38629 1.38629
887 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
888 32 3.47902 0.12486 3.52651 2.86230 32 - -
889 1.38629 1.38629 1.38629 1.38629
890 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
891 33 3.47902 0.12486 3.52651 2.86230 33 - -
892 1.38629 1.38629 1.38629 1.38629
893 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
894 34 3.12906 2.62084 3.17566 0.17229 34 - -
895 1.38629 1.38629 1.38629 1.38629
896 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
897 35 3.47902 0.12486 3.52651 2.86230 35 - -
898 1.38629 1.38629 1.38629 1.38629
899 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
900 36 0.13674 3.42016 2.82777 3.32563 36 - -
901 1.38629 1.38629 1.38629 1.38629
902 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
903 37 2.97515 3.62808 0.11284 3.53697 37 - -
904 1.38629 1.38629 1.38629 1.38629
905 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
906 38 3.47902 0.12486 3.52651 2.86230 38 - -
907 1.38629 1.38629 1.38629 1.38629
908 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
909 39 2.97515 3.62808 0.11284 3.53697 39 - -
910 1.38629 1.38629 1.38629 1.38629
911 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
912 40 3.12906 2.62084 3.17566 0.17229 40 - -
913 1.38629 1.38629 1.38629 1.38629
914 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
915 41 3.47902 0.12486 3.52651 2.86230 41 - -
916 1.38629 1.38629 1.38629 1.38629
917 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
918 42 2.97515 3.62808 0.11284 3.53697 42 - -
919 1.38629 1.38629 1.38629 1.38629
920 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
921 43 2.75118 2.78059 0.18930 3.06608 43 - -
922 1.38629 1.38629 1.38629 1.38629
923 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
924 44 2.57620 2.90019 0.27021 2.24711 44 - -
925 1.38629 1.38629 1.38629 1.38629
926 0.03604 4.03423 4.03423 1.46634 0.26236 1.09861 0.40547
927 45 3.12906 2.62084 3.17566 0.17229 45 - -
928 1.38629 1.38629 1.38629 1.38629
929 0.01818 4.01637 * 1.46634 0.26236 0.00000 *
930 //
931 HMMER3/b [3.0 | March 2010]
932 NAME 3_End_Chlorophyta_58S_end_fourb_long
933 LENG 45
934 ALPH DNA
935 RF no
936 CS no
937 MAP yes
938 DATE Sat Jan 28 01:05:29 2012
939 NSEQ 17
940 EFFN 3.448975
941 CKSUM 2381245520
942 STATS LOCAL MSV -7.2708 0.71933
943 STATS LOCAL VITERBI -7.6530 0.71933
944 STATS LOCAL FORWARD -3.8073 0.71933
945 HMM A C G T
946 m->m m->i m->d i->m i->i d->m d->d
947 COMPO 2.03392 1.10636 1.05205 1.66496
948 1.38629 1.38629 1.38629 1.38629
949 0.03605 4.03406 4.03406 1.46634 0.26236 0.00000 *
950 1 2.97495 3.62778 0.11287 3.53664 1 - -
951 1.38629 1.38629 1.38629 1.38629
952 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
953 2 3.47868 0.12490 3.52618 2.86205 2 - -
954 1.38629 1.38629 1.38629 1.38629
955 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
956 3 2.97495 3.62778 0.11287 3.53664 3 - -
957 1.38629 1.38629 1.38629 1.38629
958 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
959 4 3.47868 0.12490 3.52618 2.86205 4 - -
960 1.38629 1.38629 1.38629 1.38629
961 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
962 5 3.47868 0.12490 3.52618 2.86205 5 - -
963 1.38629 1.38629 1.38629 1.38629
964 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
965 6 3.47868 0.12490 3.52618 2.86205 6 - -
966 1.38629 1.38629 1.38629 1.38629
967 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
968 7 1.76223 2.91429 0.33941 2.78215 7 - -
969 1.38629 1.38629 1.38629 1.38629
970 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
971 8 0.13678 3.41986 2.82758 3.32530 8 - -
972 1.38629 1.38629 1.38629 1.38629
973 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
974 9 2.97495 3.62778 0.11287 3.53664 9 - -
975 1.38629 1.38629 1.38629 1.38629
976 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
977 10 2.97495 3.62778 0.11287 3.53664 10 - -
978 1.38629 1.38629 1.38629 1.38629
979 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
980 11 3.47868 0.12490 3.52618 2.86205 11 - -
981 1.38629 1.38629 1.38629 1.38629
982 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
983 12 2.85079 2.00388 2.90799 0.28395 12 - -
984 1.38629 1.38629 1.38629 1.38629
985 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
986 13 2.83058 1.96405 2.88853 0.29427 13 - -
987 1.38629 1.38629 1.38629 1.38629
988 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
989 14 3.47868 0.12490 3.52618 2.86205 14 - -
990 1.38629 1.38629 1.38629 1.38629
991 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
992 15 2.97495 3.62778 0.11287 3.53664 15 - -
993 1.38629 1.38629 1.38629 1.38629
994 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
995 16 2.97495 3.62778 0.11287 3.53664 16 - -
996 1.38629 1.38629 1.38629 1.38629
997 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
998 17 3.47868 0.12490 3.52618 2.86205 17 - -
999 1.38629 1.38629 1.38629 1.38629
1000 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1001 18 3.47868 0.12490 3.52618 2.86205 18 - -
1002 1.38629 1.38629 1.38629 1.38629
1003 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1004 19 2.24921 3.23380 0.20964 3.11822 19 - -
1005 1.38629 1.38629 1.38629 1.38629
1006 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1007 20 0.13678 3.41986 2.82758 3.32530 20 - -
1008 1.38629 1.38629 1.38629 1.38629
1009 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1010 21 2.97495 3.62778 0.11287 3.53664 21 - -
1011 1.38629 1.38629 1.38629 1.38629
1012 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1013 22 2.97495 3.62778 0.11287 3.53664 22 - -
1014 1.38629 1.38629 1.38629 1.38629
1015 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1016 23 2.97495 3.62778 0.11287 3.53664 23 - -
1017 1.38629 1.38629 1.38629 1.38629
1018 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1019 24 3.47868 0.12490 3.52618 2.86205 24 - -
1020 1.38629 1.38629 1.38629 1.38629
1021 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1022 25 0.13678 3.41986 2.82758 3.32530 25 - -
1023 1.38629 1.38629 1.38629 1.38629
1024 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1025 26 3.12876 2.62065 3.17537 0.17234 26 - -
1026 1.38629 1.38629 1.38629 1.38629
1027 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1028 27 2.97495 3.62778 0.11287 3.53664 27 - -
1029 1.38629 1.38629 1.38629 1.38629
1030 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1031 28 2.83058 1.96405 2.88853 0.29427 28 - -
1032 1.38629 1.38629 1.38629 1.38629
1033 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1034 29 3.47868 0.12490 3.52618 2.86205 29 - -
1035 1.38629 1.38629 1.38629 1.38629
1036 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1037 30 3.12876 2.62065 3.17537 0.17234 30 - -
1038 1.38629 1.38629 1.38629 1.38629
1039 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1040 31 2.97495 3.62778 0.11287 3.53664 31 - -
1041 1.38629 1.38629 1.38629 1.38629
1042 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1043 32 3.47868 0.12490 3.52618 2.86205 32 - -
1044 1.38629 1.38629 1.38629 1.38629
1045 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1046 33 3.47868 0.12490 3.52618 2.86205 33 - -
1047 1.38629 1.38629 1.38629 1.38629
1048 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1049 34 3.12876 2.62065 3.17537 0.17234 34 - -
1050 1.38629 1.38629 1.38629 1.38629
1051 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1052 35 3.47868 0.12490 3.52618 2.86205 35 - -
1053 1.38629 1.38629 1.38629 1.38629
1054 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1055 36 0.13678 3.41986 2.82758 3.32530 36 - -
1056 1.38629 1.38629 1.38629 1.38629
1057 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1058 37 2.97495 3.62778 0.11287 3.53664 37 - -
1059 1.38629 1.38629 1.38629 1.38629
1060 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1061 38 3.47868 0.12490 3.52618 2.86205 38 - -
1062 1.38629 1.38629 1.38629 1.38629
1063 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1064 39 2.97495 3.62778 0.11287 3.53664 39 - -
1065 1.38629 1.38629 1.38629 1.38629
1066 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1067 40 3.12876 2.62065 3.17537 0.17234 40 - -
1068 1.38629 1.38629 1.38629 1.38629
1069 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1070 41 3.47868 0.12490 3.52618 2.86205 41 - -
1071 1.38629 1.38629 1.38629 1.38629
1072 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1073 42 2.97495 3.62778 0.11287 3.53664 42 - -
1074 1.38629 1.38629 1.38629 1.38629
1075 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1076 43 2.97495 3.62778 0.11287 3.53664 43 - -
1077 1.38629 1.38629 1.38629 1.38629
1078 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1079 44 2.48929 0.64910 2.56125 1.14788 44 - -
1080 1.38629 1.38629 1.38629 1.38629
1081 0.03605 4.03406 4.03406 1.46634 0.26236 1.09861 0.40547
1082 45 3.12876 2.62065 3.17537 0.17234 45 - -
1083 1.38629 1.38629 1.38629 1.38629
1084 0.01819 4.01620 * 1.46634 0.26236 0.00000 *
1085 //
1086 HMMER3/b [3.0 | March 2010]
1087 NAME 3_End_Chlorophyta_58S_end_fourc_long
1088 LENG 45
1089 ALPH DNA
1090 RF no
1091 CS no
1092 MAP yes
1093 DATE Sat Jan 28 01:05:38 2012
1094 NSEQ 2
1095 EFFN 2.000000
1096 CKSUM 4033476049
1097 STATS LOCAL MSV -7.5612 0.72774
1098 STATS LOCAL VITERBI -8.2475 0.72774
1099 STATS LOCAL FORWARD -3.2348 0.72774
1100 HMM A C G T
1101 m->m m->i m->d i->m i->i d->m d->d
1102 COMPO 1.92209 1.13184 1.12344 1.57940
1103 1.38629 1.38629 1.38629 1.38629
1104 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
1105 1 2.53331 3.02441 0.20344 2.88069 1 - -
1106 1.38629 1.38629 1.38629 1.38629
1107 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1108 2 2.81865 0.23582 2.88868 2.35662 2 - -
1109 1.38629 1.38629 1.38629 1.38629
1110 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1111 3 2.53331 3.02441 0.20344 2.88069 3 - -
1112 1.38629 1.38629 1.38629 1.38629
1113 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1114 4 2.81865 0.23582 2.88868 2.35662 4 - -
1115 1.38629 1.38629 1.38629 1.38629
1116 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1117 5 2.81865 0.23582 2.88868 2.35662 5 - -
1118 1.38629 1.38629 1.38629 1.38629
1119 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1120 6 2.81865 0.23582 2.88868 2.35662 6 - -
1121 1.38629 1.38629 1.38629 1.38629
1122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1123 7 2.53331 3.02441 0.20344 2.88069 7 - -
1124 1.38629 1.38629 1.38629 1.38629
1125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1126 8 2.81865 0.23582 2.88868 2.35662 8 - -
1127 1.38629 1.38629 1.38629 1.38629
1128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1129 9 2.53331 3.02441 0.20344 2.88069 9 - -
1130 1.38629 1.38629 1.38629 1.38629
1131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1132 10 2.53331 3.02441 0.20344 2.88069 10 - -
1133 1.38629 1.38629 1.38629 1.38629
1134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1135 11 2.81865 0.23582 2.88868 2.35662 11 - -
1136 1.38629 1.38629 1.38629 1.38629
1137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1138 12 2.57915 2.25909 2.64442 0.28946 12 - -
1139 1.38629 1.38629 1.38629 1.38629
1140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1141 13 2.81865 0.23582 2.88868 2.35662 13 - -
1142 1.38629 1.38629 1.38629 1.38629
1143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1144 14 2.81865 0.23582 2.88868 2.35662 14 - -
1145 1.38629 1.38629 1.38629 1.38629
1146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1147 15 2.53331 3.02441 0.20344 2.88069 15 - -
1148 1.38629 1.38629 1.38629 1.38629
1149 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1150 16 2.53331 3.02441 0.20344 2.88069 16 - -
1151 1.38629 1.38629 1.38629 1.38629
1152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1153 17 2.81865 0.23582 2.88868 2.35662 17 - -
1154 1.38629 1.38629 1.38629 1.38629
1155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1156 18 2.57915 2.25909 2.64442 0.28946 18 - -
1157 1.38629 1.38629 1.38629 1.38629
1158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1159 19 0.23862 2.84929 2.43386 2.70756 19 - -
1160 1.38629 1.38629 1.38629 1.38629
1161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1162 20 0.23862 2.84929 2.43386 2.70756 20 - -
1163 1.38629 1.38629 1.38629 1.38629
1164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1165 21 2.53331 3.02441 0.20344 2.88069 21 - -
1166 1.38629 1.38629 1.38629 1.38629
1167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1168 22 2.53331 3.02441 0.20344 2.88069 22 - -
1169 1.38629 1.38629 1.38629 1.38629
1170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1171 23 2.53331 3.02441 0.20344 2.88069 23 - -
1172 1.38629 1.38629 1.38629 1.38629
1173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1174 24 2.81865 0.23582 2.88868 2.35662 24 - -
1175 1.38629 1.38629 1.38629 1.38629
1176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1177 25 0.23862 2.84929 2.43386 2.70756 25 - -
1178 1.38629 1.38629 1.38629 1.38629
1179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1180 26 2.57915 2.25909 2.64442 0.28946 26 - -
1181 1.38629 1.38629 1.38629 1.38629
1182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1183 27 2.53331 3.02441 0.20344 2.88069 27 - -
1184 1.38629 1.38629 1.38629 1.38629
1185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1186 28 2.57915 2.25909 2.64442 0.28946 28 - -
1187 1.38629 1.38629 1.38629 1.38629
1188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1189 29 2.81865 0.23582 2.88868 2.35662 29 - -
1190 1.38629 1.38629 1.38629 1.38629
1191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1192 30 2.57915 2.25909 2.64442 0.28946 30 - -
1193 1.38629 1.38629 1.38629 1.38629
1194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1195 31 2.53331 3.02441 0.20344 2.88069 31 - -
1196 1.38629 1.38629 1.38629 1.38629
1197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1198 32 2.81865 0.23582 2.88868 2.35662 32 - -
1199 1.38629 1.38629 1.38629 1.38629
1200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1201 33 2.81865 0.23582 2.88868 2.35662 33 - -
1202 1.38629 1.38629 1.38629 1.38629
1203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1204 34 2.57915 2.25909 2.64442 0.28946 34 - -
1205 1.38629 1.38629 1.38629 1.38629
1206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1207 35 2.81865 0.23582 2.88868 2.35662 35 - -
1208 1.38629 1.38629 1.38629 1.38629
1209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1210 36 0.23862 2.84929 2.43386 2.70756 36 - -
1211 1.38629 1.38629 1.38629 1.38629
1212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1213 37 2.53331 3.02441 0.20344 2.88069 37 - -
1214 1.38629 1.38629 1.38629 1.38629
1215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1216 38 2.81865 0.23582 2.88868 2.35662 38 - -
1217 1.38629 1.38629 1.38629 1.38629
1218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1219 39 2.53331 3.02441 0.20344 2.88069 39 - -
1220 1.38629 1.38629 1.38629 1.38629
1221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1222 40 2.57915 2.25909 2.64442 0.28946 40 - -
1223 1.38629 1.38629 1.38629 1.38629
1224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1225 41 2.81865 0.23582 2.88868 2.35662 41 - -
1226 1.38629 1.38629 1.38629 1.38629
1227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1228 42 2.53331 3.02441 0.20344 2.88069 42 - -
1229 1.38629 1.38629 1.38629 1.38629
1230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1231 43 2.53331 3.02441 0.20344 2.88069 43 - -
1232 1.38629 1.38629 1.38629 1.38629
1233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1234 44 2.15554 1.00938 2.23102 0.88601 44 - -
1235 1.38629 1.38629 1.38629 1.38629
1236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1237 45 2.57915 2.25909 2.64442 0.28946 45 - -
1238 1.38629 1.38629 1.38629 1.38629
1239 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
1240 //
1241 HMMER3/b [3.0 | March 2010]
1242 NAME 3_End_Chlorophyta_58S_end_fourd_long
1243 LENG 45
1244 ALPH DNA
1245 RF no
1246 CS no
1247 MAP yes
1248 DATE Sat Jan 28 01:05:44 2012
1249 NSEQ 37
1250 EFFN 3.491333
1251 CKSUM 4193891022
1252 STATS LOCAL MSV -7.3473 0.71933
1253 STATS LOCAL VITERBI -7.6159 0.71933
1254 STATS LOCAL FORWARD -3.6748 0.71933
1255 HMM A C G T
1256 m->m m->i m->d i->m i->i d->m d->d
1257 COMPO 1.81457 1.15055 1.12962 1.62216
1258 1.38629 1.38629 1.38629 1.38629
1259 0.03577 4.04153 4.04153 1.46634 0.26236 0.00000 *
1260 1 2.98381 3.64076 0.11152 3.55100 1 - -
1261 1.38629 1.38629 1.38629 1.38629
1262 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1263 2 3.49351 0.12323 3.54036 2.87276 2 - -
1264 1.38629 1.38629 1.38629 1.38629
1265 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1266 3 2.98381 3.64076 0.11152 3.55100 3 - -
1267 1.38629 1.38629 1.38629 1.38629
1268 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1269 4 3.49351 0.12323 3.54036 2.87276 4 - -
1270 1.38629 1.38629 1.38629 1.38629
1271 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1272 5 3.14193 2.62901 3.18803 0.17032 5 - -
1273 1.38629 1.38629 1.38629 1.38629
1274 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1275 6 3.06128 0.23563 3.12175 2.12847 6 - -
1276 1.38629 1.38629 1.38629 1.38629
1277 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1278 7 2.98381 3.64076 0.11152 3.55100 7 - -
1279 1.38629 1.38629 1.38629 1.38629
1280 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1281 8 0.13515 3.43277 2.83592 3.33945 8 - -
1282 1.38629 1.38629 1.38629 1.38629
1283 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1284 9 2.98381 3.64076 0.11152 3.55100 9 - -
1285 1.38629 1.38629 1.38629 1.38629
1286 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1287 10 2.36747 3.31821 0.18678 3.20795 10 - -
1288 1.38629 1.38629 1.38629 1.38629
1289 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1290 11 3.49351 0.12323 3.54036 2.87276 11 - -
1291 1.38629 1.38629 1.38629 1.38629
1292 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1293 12 2.58532 0.51894 2.65603 1.34996 12 - -
1294 1.38629 1.38629 1.38629 1.38629
1295 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1296 13 3.14193 2.62901 3.18803 0.17032 13 - -
1297 1.38629 1.38629 1.38629 1.38629
1298 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1299 14 3.35284 0.15345 3.40426 2.60314 14 - -
1300 1.38629 1.38629 1.38629 1.38629
1301 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1302 15 2.98381 3.64076 0.11152 3.55100 15 - -
1303 1.38629 1.38629 1.38629 1.38629
1304 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1305 16 2.98381 3.64076 0.11152 3.55100 16 - -
1306 1.38629 1.38629 1.38629 1.38629
1307 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1308 17 3.12324 0.21522 3.18195 2.22456 17 - -
1309 1.38629 1.38629 1.38629 1.38629
1310 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1311 18 3.49351 0.12323 3.54036 2.87276 18 - -
1312 1.38629 1.38629 1.38629 1.38629
1313 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1314 19 0.13515 3.43277 2.83592 3.33945 19 - -
1315 1.38629 1.38629 1.38629 1.38629
1316 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1317 20 0.13515 3.43277 2.83592 3.33945 20 - -
1318 1.38629 1.38629 1.38629 1.38629
1319 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1320 21 2.98381 3.64076 0.11152 3.55100 21 - -
1321 1.38629 1.38629 1.38629 1.38629
1322 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1323 22 0.13515 3.43277 2.83592 3.33945 22 - -
1324 1.38629 1.38629 1.38629 1.38629
1325 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1326 23 2.98381 3.64076 0.11152 3.55100 23 - -
1327 1.38629 1.38629 1.38629 1.38629
1328 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1329 24 3.49351 0.12323 3.54036 2.87276 24 - -
1330 1.38629 1.38629 1.38629 1.38629
1331 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1332 25 0.13515 3.43277 2.83592 3.33945 25 - -
1333 1.38629 1.38629 1.38629 1.38629
1334 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1335 26 3.14193 2.62901 3.18803 0.17032 26 - -
1336 1.38629 1.38629 1.38629 1.38629
1337 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1338 27 2.98381 3.64076 0.11152 3.55100 27 - -
1339 1.38629 1.38629 1.38629 1.38629
1340 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1341 28 3.14193 2.62901 3.18803 0.17032 28 - -
1342 1.38629 1.38629 1.38629 1.38629
1343 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1344 29 3.49351 0.12323 3.54036 2.87276 29 - -
1345 1.38629 1.38629 1.38629 1.38629
1346 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1347 30 3.14193 2.62901 3.18803 0.17032 30 - -
1348 1.38629 1.38629 1.38629 1.38629
1349 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1350 31 2.98381 3.64076 0.11152 3.55100 31 - -
1351 1.38629 1.38629 1.38629 1.38629
1352 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1353 32 2.20534 0.64774 1.42928 2.06296 32 - -
1354 1.38629 1.38629 1.38629 1.38629
1355 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1356 33 3.49351 0.12323 3.54036 2.87276 33 - -
1357 1.38629 1.38629 1.38629 1.38629
1358 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1359 34 3.14193 2.62901 3.18803 0.17032 34 - -
1360 1.38629 1.38629 1.38629 1.38629
1361 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1362 35 3.49351 0.12323 3.54036 2.87276 35 - -
1363 1.38629 1.38629 1.38629 1.38629
1364 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1365 36 0.13515 3.43277 2.83592 3.33945 36 - -
1366 1.38629 1.38629 1.38629 1.38629
1367 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1368 37 2.98381 3.64076 0.11152 3.55100 37 - -
1369 1.38629 1.38629 1.38629 1.38629
1370 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1371 38 3.49351 0.12323 3.54036 2.87276 38 - -
1372 1.38629 1.38629 1.38629 1.38629
1373 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1374 39 2.98381 3.64076 0.11152 3.55100 39 - -
1375 1.38629 1.38629 1.38629 1.38629
1376 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1377 40 3.14193 2.62901 3.18803 0.17032 40 - -
1378 1.38629 1.38629 1.38629 1.38629
1379 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1380 41 3.49351 0.12323 3.54036 2.87276 41 - -
1381 1.38629 1.38629 1.38629 1.38629
1382 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1383 42 2.98381 3.64076 0.11152 3.55100 42 - -
1384 1.38629 1.38629 1.38629 1.38629
1385 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1386 43 2.98381 3.64076 0.11152 3.55100 43 - -
1387 1.38629 1.38629 1.38629 1.38629
1388 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1389 44 3.49351 0.12323 3.54036 2.87276 44 - -
1390 1.38629 1.38629 1.38629 1.38629
1391 0.03577 4.04153 4.04153 1.46634 0.26236 1.09861 0.40547
1392 45 3.14193 2.62901 3.18803 0.17032 45 - -
1393 1.38629 1.38629 1.38629 1.38629
1394 0.01805 4.02380 * 1.46634 0.26236 0.00000 *
1395 //
1396 HMMER3/b [3.0 | March 2010]
1397 NAME 3_End_Chlorophyta_58S_end_foure_long
1398 LENG 45
1399 ALPH DNA
1400 RF no
1401 CS no
1402 MAP yes
1403 DATE Sat Jan 28 01:05:49 2012
1404 NSEQ 2
1405 EFFN 2.000000
1406 CKSUM 3417266488
1407 STATS LOCAL MSV -7.7330 0.72754
1408 STATS LOCAL VITERBI -8.2607 0.72754
1409 STATS LOCAL FORWARD -3.0985 0.72754
1410 HMM A C G T
1411 m->m m->i m->d i->m i->i d->m d->d
1412 COMPO 1.59465 1.19407 1.26934 1.54638
1413 1.38629 1.38629 1.38629 1.38629
1414 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
1415 1 2.53331 3.02441 0.20344 2.88069 1 - -
1416 1.38629 1.38629 1.38629 1.38629
1417 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1418 2 2.81865 0.23582 2.88868 2.35662 2 - -
1419 1.38629 1.38629 1.38629 1.38629
1420 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1421 3 0.23862 2.84929 2.43386 2.70756 3 - -
1422 1.38629 1.38629 1.38629 1.38629
1423 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1424 4 2.81865 0.23582 2.88868 2.35662 4 - -
1425 1.38629 1.38629 1.38629 1.38629
1426 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1427 5 2.57915 2.25909 2.64442 0.28946 5 - -
1428 1.38629 1.38629 1.38629 1.38629
1429 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1430 6 2.81865 0.23582 2.88868 2.35662 6 - -
1431 1.38629 1.38629 1.38629 1.38629
1432 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1433 7 2.53331 3.02441 0.20344 2.88069 7 - -
1434 1.38629 1.38629 1.38629 1.38629
1435 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1436 8 0.23862 2.84929 2.43386 2.70756 8 - -
1437 1.38629 1.38629 1.38629 1.38629
1438 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1439 9 2.53331 3.02441 0.20344 2.88069 9 - -
1440 1.38629 1.38629 1.38629 1.38629
1441 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1442 10 2.53331 3.02441 0.20344 2.88069 10 - -
1443 1.38629 1.38629 1.38629 1.38629
1444 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1445 11 2.81865 0.23582 2.88868 2.35662 11 - -
1446 1.38629 1.38629 1.38629 1.38629
1447 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1448 12 2.81865 0.23582 2.88868 2.35662 12 - -
1449 1.38629 1.38629 1.38629 1.38629
1450 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1451 13 2.57915 2.25909 2.64442 0.28946 13 - -
1452 1.38629 1.38629 1.38629 1.38629
1453 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1454 14 2.81865 0.23582 2.88868 2.35662 14 - -
1455 1.38629 1.38629 1.38629 1.38629
1456 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1457 15 2.53331 3.02441 0.20344 2.88069 15 - -
1458 1.38629 1.38629 1.38629 1.38629
1459 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1460 16 2.53331 3.02441 0.20344 2.88069 16 - -
1461 1.38629 1.38629 1.38629 1.38629
1462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1463 17 2.81865 0.23582 2.88868 2.35662 17 - -
1464 1.38629 1.38629 1.38629 1.38629
1465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1466 18 2.81865 0.23582 2.88868 2.35662 18 - -
1467 1.38629 1.38629 1.38629 1.38629
1468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1469 19 0.23862 2.84929 2.43386 2.70756 19 - -
1470 1.38629 1.38629 1.38629 1.38629
1471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1472 20 0.23862 2.84929 2.43386 2.70756 20 - -
1473 1.38629 1.38629 1.38629 1.38629
1474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1475 21 2.53331 3.02441 0.20344 2.88069 21 - -
1476 1.38629 1.38629 1.38629 1.38629
1477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1478 22 0.23862 2.84929 2.43386 2.70756 22 - -
1479 1.38629 1.38629 1.38629 1.38629
1480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1481 23 2.53331 3.02441 0.20344 2.88069 23 - -
1482 1.38629 1.38629 1.38629 1.38629
1483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1484 24 2.57915 2.25909 2.64442 0.28946 24 - -
1485 1.38629 1.38629 1.38629 1.38629
1486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1487 25 0.23862 2.84929 2.43386 2.70756 25 - -
1488 1.38629 1.38629 1.38629 1.38629
1489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1490 26 2.57915 2.25909 2.64442 0.28946 26 - -
1491 1.38629 1.38629 1.38629 1.38629
1492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1493 27 2.53331 3.02441 0.20344 2.88069 27 - -
1494 1.38629 1.38629 1.38629 1.38629
1495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1496 28 2.81865 0.23582 2.88868 2.35662 28 - -
1497 1.38629 1.38629 1.38629 1.38629
1498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1499 29 2.81865 0.23582 2.88868 2.35662 29 - -
1500 1.38629 1.38629 1.38629 1.38629
1501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1502 30 2.57915 2.25909 2.64442 0.28946 30 - -
1503 1.38629 1.38629 1.38629 1.38629
1504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1505 31 2.53331 3.02441 0.20344 2.88069 31 - -
1506 1.38629 1.38629 1.38629 1.38629
1507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1508 32 2.57915 2.25909 2.64442 0.28946 32 - -
1509 1.38629 1.38629 1.38629 1.38629
1510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1511 33 2.81865 0.23582 2.88868 2.35662 33 - -
1512 1.38629 1.38629 1.38629 1.38629
1513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1514 34 2.57915 2.25909 2.64442 0.28946 34 - -
1515 1.38629 1.38629 1.38629 1.38629
1516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1517 35 2.81865 0.23582 2.88868 2.35662 35 - -
1518 1.38629 1.38629 1.38629 1.38629
1519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1520 36 0.23862 2.84929 2.43386 2.70756 36 - -
1521 1.38629 1.38629 1.38629 1.38629
1522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1523 37 2.53331 3.02441 0.20344 2.88069 37 - -
1524 1.38629 1.38629 1.38629 1.38629
1525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1526 38 2.81865 0.23582 2.88868 2.35662 38 - -
1527 1.38629 1.38629 1.38629 1.38629
1528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1529 39 2.53331 3.02441 0.20344 2.88069 39 - -
1530 1.38629 1.38629 1.38629 1.38629
1531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1532 40 2.57915 2.25909 2.64442 0.28946 40 - -
1533 1.38629 1.38629 1.38629 1.38629
1534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1535 41 2.81865 0.23582 2.88868 2.35662 41 - -
1536 1.38629 1.38629 1.38629 1.38629
1537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1538 42 0.23862 2.84929 2.43386 2.70756 42 - -
1539 1.38629 1.38629 1.38629 1.38629
1540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1541 43 2.53331 3.02441 0.20344 2.88069 43 - -
1542 1.38629 1.38629 1.38629 1.38629
1543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1544 44 2.81865 0.23582 2.88868 2.35662 44 - -
1545 1.38629 1.38629 1.38629 1.38629
1546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1547 45 2.57915 2.25909 2.64442 0.28946 45 - -
1548 1.38629 1.38629 1.38629 1.38629
1549 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
1550 //
1551 HMMER3/b [3.0 | March 2010]
1552 NAME 3_End_Chlorophyta_58S_end_fourf_long
1553 LENG 45
1554 ALPH DNA
1555 RF no
1556 CS no
1557 MAP yes
1558 DATE Sat Jan 28 01:06:00 2012
1559 NSEQ 8
1560 EFFN 3.167969
1561 CKSUM 3434890060
1562 STATS LOCAL MSV -8.1024 0.71933
1563 STATS LOCAL VITERBI -7.7981 0.71933
1564 STATS LOCAL FORWARD -4.1734 0.71933
1565 HMM A C G T
1566 m->m m->i m->d i->m i->i d->m d->d
1567 COMPO 1.92630 1.26262 1.04226 1.51985
1568 1.38629 1.38629 1.38629 1.38629
1569 0.03797 3.98303 3.98303 1.46634 0.26236 0.00000 *
1570 1 2.91173 3.53592 0.12299 3.43528 1 - -
1571 1.38629 1.38629 1.38629 1.38629
1572 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1573 2 3.37444 0.13743 3.42635 2.78609 2 - -
1574 1.38629 1.38629 1.38629 1.38629
1575 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1576 3 2.91173 3.53592 0.12299 3.43528 3 - -
1577 1.38629 1.38629 1.38629 1.38629
1578 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1579 4 3.37444 0.13743 3.42635 2.78609 4 - -
1580 1.38629 1.38629 1.38629 1.38629
1581 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1582 5 3.37444 0.13743 3.42635 2.78609 5 - -
1583 1.38629 1.38629 1.38629 1.38629
1584 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1585 6 3.37444 0.13743 3.42635 2.78609 6 - -
1586 1.38629 1.38629 1.38629 1.38629
1587 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1588 7 0.14880 3.32943 2.76878 3.22633 7 - -
1589 1.38629 1.38629 1.38629 1.38629
1590 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1591 8 0.14880 3.32943 2.76878 3.22633 8 - -
1592 1.38629 1.38629 1.38629 1.38629
1593 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1594 9 2.91173 3.53592 0.12299 3.43528 9 - -
1595 1.38629 1.38629 1.38629 1.38629
1596 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1597 10 2.91173 3.53592 0.12299 3.43528 10 - -
1598 1.38629 1.38629 1.38629 1.38629
1599 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1600 11 3.37444 0.13743 3.42635 2.78609 11 - -
1601 1.38629 1.38629 1.38629 1.38629
1602 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1603 12 3.03758 2.56263 3.08768 0.18713 12 - -
1604 1.38629 1.38629 1.38629 1.38629
1605 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1606 13 3.03758 2.56263 3.08768 0.18713 13 - -
1607 1.38629 1.38629 1.38629 1.38629
1608 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1609 14 3.37444 0.13743 3.42635 2.78609 14 - -
1610 1.38629 1.38629 1.38629 1.38629
1611 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1612 15 2.91173 3.53592 0.12299 3.43528 15 - -
1613 1.38629 1.38629 1.38629 1.38629
1614 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1615 16 2.91173 3.53592 0.12299 3.43528 16 - -
1616 1.38629 1.38629 1.38629 1.38629
1617 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1618 17 3.37444 0.13743 3.42635 2.78609 17 - -
1619 1.38629 1.38629 1.38629 1.38629
1620 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1621 18 3.03758 2.56263 3.08768 0.18713 18 - -
1622 1.38629 1.38629 1.38629 1.38629
1623 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1624 19 2.91173 3.53592 0.12299 3.43528 19 - -
1625 1.38629 1.38629 1.38629 1.38629
1626 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1627 20 0.14880 3.32943 2.76878 3.22633 20 - -
1628 1.38629 1.38629 1.38629 1.38629
1629 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1630 21 2.91173 3.53592 0.12299 3.43528 21 - -
1631 1.38629 1.38629 1.38629 1.38629
1632 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1633 22 2.91173 3.53592 0.12299 3.43528 22 - -
1634 1.38629 1.38629 1.38629 1.38629
1635 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1636 23 2.91173 3.53592 0.12299 3.43528 23 - -
1637 1.38629 1.38629 1.38629 1.38629
1638 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1639 24 3.37444 0.13743 3.42635 2.78609 24 - -
1640 1.38629 1.38629 1.38629 1.38629
1641 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1642 25 0.14880 3.32943 2.76878 3.22633 25 - -
1643 1.38629 1.38629 1.38629 1.38629
1644 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1645 26 3.03758 2.56263 3.08768 0.18713 26 - -
1646 1.38629 1.38629 1.38629 1.38629
1647 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1648 27 2.91173 3.53592 0.12299 3.43528 27 - -
1649 1.38629 1.38629 1.38629 1.38629
1650 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1651 28 3.03758 2.56263 3.08768 0.18713 28 - -
1652 1.38629 1.38629 1.38629 1.38629
1653 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1654 29 3.03758 2.56263 3.08768 0.18713 29 - -
1655 1.38629 1.38629 1.38629 1.38629
1656 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1657 30 3.03758 2.56263 3.08768 0.18713 30 - -
1658 1.38629 1.38629 1.38629 1.38629
1659 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1660 31 2.91173 3.53592 0.12299 3.43528 31 - -
1661 1.38629 1.38629 1.38629 1.38629
1662 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1663 32 3.37444 0.13743 3.42635 2.78609 32 - -
1664 1.38629 1.38629 1.38629 1.38629
1665 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1666 33 3.37444 0.13743 3.42635 2.78609 33 - -
1667 1.38629 1.38629 1.38629 1.38629
1668 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1669 34 3.03758 2.56263 3.08768 0.18713 34 - -
1670 1.38629 1.38629 1.38629 1.38629
1671 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1672 35 3.37444 0.13743 3.42635 2.78609 35 - -
1673 1.38629 1.38629 1.38629 1.38629
1674 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1675 36 0.14880 3.32943 2.76878 3.22633 36 - -
1676 1.38629 1.38629 1.38629 1.38629
1677 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1678 37 2.91173 3.53592 0.12299 3.43528 37 - -
1679 1.38629 1.38629 1.38629 1.38629
1680 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1681 38 3.37444 0.13743 3.42635 2.78609 38 - -
1682 1.38629 1.38629 1.38629 1.38629
1683 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1684 39 2.91173 3.53592 0.12299 3.43528 39 - -
1685 1.38629 1.38629 1.38629 1.38629
1686 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1687 40 3.03758 2.56263 3.08768 0.18713 40 - -
1688 1.38629 1.38629 1.38629 1.38629
1689 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1690 41 3.37444 0.13743 3.42635 2.78609 41 - -
1691 1.38629 1.38629 1.38629 1.38629
1692 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1693 42 2.91173 3.53592 0.12299 3.43528 42 - -
1694 1.38629 1.38629 1.38629 1.38629
1695 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1696 43 2.91173 3.53592 0.12299 3.43528 43 - -
1697 1.38629 1.38629 1.38629 1.38629
1698 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1699 44 2.91173 3.53592 0.12299 3.43528 44 - -
1700 1.38629 1.38629 1.38629 1.38629
1701 0.03797 3.98303 3.98303 1.46634 0.26236 1.09861 0.40547
1702 45 2.75074 1.94228 2.81080 0.31118 45 - -
1703 1.38629 1.38629 1.38629 1.38629
1704 0.01917 3.96423 * 1.46634 0.26236 0.00000 *
1705 //
1706 HMMER3/b [3.0 | March 2010]
1707 NAME 3_End_Chlorophyta_58S_end_fourg_long
1708 LENG 45
1709 ALPH DNA
1710 RF no
1711 CS no
1712 MAP yes
1713 DATE Sat Jan 28 01:06:07 2012
1714 NSEQ 2
1715 EFFN 2.000000
1716 CKSUM 2243792262
1717 STATS LOCAL MSV -7.3533 0.72732
1718 STATS LOCAL VITERBI -8.2770 0.72732
1719 STATS LOCAL FORWARD -3.2502 0.72732
1720 HMM A C G T
1721 m->m m->i m->d i->m i->i d->m d->d
1722 COMPO 1.92263 1.24319 1.07887 1.49018
1723 1.38629 1.38629 1.38629 1.38629
1724 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
1725 1 2.53331 3.02441 0.20344 2.88069 1 - -
1726 1.38629 1.38629 1.38629 1.38629
1727 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1728 2 2.81865 0.23582 2.88868 2.35662 2 - -
1729 1.38629 1.38629 1.38629 1.38629
1730 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1731 3 2.53331 3.02441 0.20344 2.88069 3 - -
1732 1.38629 1.38629 1.38629 1.38629
1733 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1734 4 2.57915 2.25909 2.64442 0.28946 4 - -
1735 1.38629 1.38629 1.38629 1.38629
1736 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1737 5 2.81865 0.23582 2.88868 2.35662 5 - -
1738 1.38629 1.38629 1.38629 1.38629
1739 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1740 6 2.81865 0.23582 2.88868 2.35662 6 - -
1741 1.38629 1.38629 1.38629 1.38629
1742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1743 7 2.53331 3.02441 0.20344 2.88069 7 - -
1744 1.38629 1.38629 1.38629 1.38629
1745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1746 8 2.81865 0.23582 2.88868 2.35662 8 - -
1747 1.38629 1.38629 1.38629 1.38629
1748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1749 9 2.53331 3.02441 0.20344 2.88069 9 - -
1750 1.38629 1.38629 1.38629 1.38629
1751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1752 10 2.53331 3.02441 0.20344 2.88069 10 - -
1753 1.38629 1.38629 1.38629 1.38629
1754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1755 11 2.81865 0.23582 2.88868 2.35662 11 - -
1756 1.38629 1.38629 1.38629 1.38629
1757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1758 12 2.57915 2.25909 2.64442 0.28946 12 - -
1759 1.38629 1.38629 1.38629 1.38629
1760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1761 13 2.57915 2.25909 2.64442 0.28946 13 - -
1762 1.38629 1.38629 1.38629 1.38629
1763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1764 14 2.81865 0.23582 2.88868 2.35662 14 - -
1765 1.38629 1.38629 1.38629 1.38629
1766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1767 15 2.53331 3.02441 0.20344 2.88069 15 - -
1768 1.38629 1.38629 1.38629 1.38629
1769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1770 16 2.53331 3.02441 0.20344 2.88069 16 - -
1771 1.38629 1.38629 1.38629 1.38629
1772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1773 17 2.81865 0.23582 2.88868 2.35662 17 - -
1774 1.38629 1.38629 1.38629 1.38629
1775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1776 18 2.81865 0.23582 2.88868 2.35662 18 - -
1777 1.38629 1.38629 1.38629 1.38629
1778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1779 19 0.23862 2.84929 2.43386 2.70756 19 - -
1780 1.38629 1.38629 1.38629 1.38629
1781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1782 20 0.23862 2.84929 2.43386 2.70756 20 - -
1783 1.38629 1.38629 1.38629 1.38629
1784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1785 21 2.53331 3.02441 0.20344 2.88069 21 - -
1786 1.38629 1.38629 1.38629 1.38629
1787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1788 22 2.53331 3.02441 0.20344 2.88069 22 - -
1789 1.38629 1.38629 1.38629 1.38629
1790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1791 23 2.53331 3.02441 0.20344 2.88069 23 - -
1792 1.38629 1.38629 1.38629 1.38629
1793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1794 24 2.81865 0.23582 2.88868 2.35662 24 - -
1795 1.38629 1.38629 1.38629 1.38629
1796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1797 25 0.23862 2.84929 2.43386 2.70756 25 - -
1798 1.38629 1.38629 1.38629 1.38629
1799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1800 26 2.57915 2.25909 2.64442 0.28946 26 - -
1801 1.38629 1.38629 1.38629 1.38629
1802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1803 27 2.53331 3.02441 0.20344 2.88069 27 - -
1804 1.38629 1.38629 1.38629 1.38629
1805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1806 28 2.57915 2.25909 2.64442 0.28946 28 - -
1807 1.38629 1.38629 1.38629 1.38629
1808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1809 29 2.57915 2.25909 2.64442 0.28946 29 - -
1810 1.38629 1.38629 1.38629 1.38629
1811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1812 30 2.57915 2.25909 2.64442 0.28946 30 - -
1813 1.38629 1.38629 1.38629 1.38629
1814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1815 31 2.53331 3.02441 0.20344 2.88069 31 - -
1816 1.38629 1.38629 1.38629 1.38629
1817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1818 32 2.81865 0.23582 2.88868 2.35662 32 - -
1819 1.38629 1.38629 1.38629 1.38629
1820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1821 33 2.81865 0.23582 2.88868 2.35662 33 - -
1822 1.38629 1.38629 1.38629 1.38629
1823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1824 34 2.57915 2.25909 2.64442 0.28946 34 - -
1825 1.38629 1.38629 1.38629 1.38629
1826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1827 35 2.81865 0.23582 2.88868 2.35662 35 - -
1828 1.38629 1.38629 1.38629 1.38629
1829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1830 36 0.23862 2.84929 2.43386 2.70756 36 - -
1831 1.38629 1.38629 1.38629 1.38629
1832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1833 37 2.53331 3.02441 0.20344 2.88069 37 - -
1834 1.38629 1.38629 1.38629 1.38629
1835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1836 38 2.81865 0.23582 2.88868 2.35662 38 - -
1837 1.38629 1.38629 1.38629 1.38629
1838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1839 39 2.53331 3.02441 0.20344 2.88069 39 - -
1840 1.38629 1.38629 1.38629 1.38629
1841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1842 40 2.57915 2.25909 2.64442 0.28946 40 - -
1843 1.38629 1.38629 1.38629 1.38629
1844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1845 41 2.81865 0.23582 2.88868 2.35662 41 - -
1846 1.38629 1.38629 1.38629 1.38629
1847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1848 42 2.53331 3.02441 0.20344 2.88069 42 - -
1849 1.38629 1.38629 1.38629 1.38629
1850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1851 43 2.53331 3.02441 0.20344 2.88069 43 - -
1852 1.38629 1.38629 1.38629 1.38629
1853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1854 44 2.53331 3.02441 0.20344 2.88069 44 - -
1855 1.38629 1.38629 1.38629 1.38629
1856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1857 45 2.57915 2.25909 2.64442 0.28946 45 - -
1858 1.38629 1.38629 1.38629 1.38629
1859 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
1860 //
1861 HMMER3/b [3.0 | March 2010]
1862 NAME 3_End_Chlorophyta_58S_end_fourteen_long
1863 LENG 45
1864 ALPH DNA
1865 RF no
1866 CS no
1867 MAP yes
1868 DATE Sat Jan 28 01:09:05 2012
1869 NSEQ 2
1870 EFFN 2.000000
1871 CKSUM 3072563933
1872 STATS LOCAL MSV -7.4500 0.72782
1873 STATS LOCAL VITERBI -8.2633 0.72782
1874 STATS LOCAL FORWARD -3.4545 0.72782
1875 HMM A C G T
1876 m->m m->i m->d i->m i->i d->m d->d
1877 COMPO 1.92135 1.28482 1.17173 1.32028
1878 1.38629 1.38629 1.38629 1.38629
1879 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
1880 1 2.57915 2.25909 2.64442 0.28946 1 - -
1881 1.38629 1.38629 1.38629 1.38629
1882 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1883 2 2.57915 2.25909 2.64442 0.28946 2 - -
1884 1.38629 1.38629 1.38629 1.38629
1885 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1886 3 2.53331 3.02441 0.20344 2.88069 3 - -
1887 1.38629 1.38629 1.38629 1.38629
1888 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1889 4 2.81865 0.23582 2.88868 2.35662 4 - -
1890 1.38629 1.38629 1.38629 1.38629
1891 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1892 5 2.53331 3.02441 0.20344 2.88069 5 - -
1893 1.38629 1.38629 1.38629 1.38629
1894 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1895 6 2.81865 0.23582 2.88868 2.35662 6 - -
1896 1.38629 1.38629 1.38629 1.38629
1897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1898 7 2.81865 0.23582 2.88868 2.35662 7 - -
1899 1.38629 1.38629 1.38629 1.38629
1900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1901 8 2.81865 0.23582 2.88868 2.35662 8 - -
1902 1.38629 1.38629 1.38629 1.38629
1903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1904 9 2.53331 3.02441 0.20344 2.88069 9 - -
1905 1.38629 1.38629 1.38629 1.38629
1906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1907 10 2.53331 3.02441 0.20344 2.88069 10 - -
1908 1.38629 1.38629 1.38629 1.38629
1909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1910 11 2.53331 3.02441 0.20344 2.88069 11 - -
1911 1.38629 1.38629 1.38629 1.38629
1912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1913 12 2.57915 2.25909 2.64442 0.28946 12 - -
1914 1.38629 1.38629 1.38629 1.38629
1915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1916 13 2.57915 2.25909 2.64442 0.28946 13 - -
1917 1.38629 1.38629 1.38629 1.38629
1918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1919 14 2.57915 2.25909 2.64442 0.28946 14 - -
1920 1.38629 1.38629 1.38629 1.38629
1921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1922 15 2.53331 3.02441 0.20344 2.88069 15 - -
1923 1.38629 1.38629 1.38629 1.38629
1924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1925 16 0.23862 2.84929 2.43386 2.70756 16 - -
1926 1.38629 1.38629 1.38629 1.38629
1927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1928 17 2.53331 3.02441 0.20344 2.88069 17 - -
1929 1.38629 1.38629 1.38629 1.38629
1930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1931 18 2.81865 0.23582 2.88868 2.35662 18 - -
1932 1.38629 1.38629 1.38629 1.38629
1933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1934 19 2.81865 0.23582 2.88868 2.35662 19 - -
1935 1.38629 1.38629 1.38629 1.38629
1936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1937 20 2.57915 2.25909 2.64442 0.28946 20 - -
1938 1.38629 1.38629 1.38629 1.38629
1939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1940 21 2.53331 3.02441 0.20344 2.88069 21 - -
1941 1.38629 1.38629 1.38629 1.38629
1942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1943 22 2.53331 3.02441 0.20344 2.88069 22 - -
1944 1.38629 1.38629 1.38629 1.38629
1945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1946 23 2.53331 3.02441 0.20344 2.88069 23 - -
1947 1.38629 1.38629 1.38629 1.38629
1948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1949 24 2.81865 0.23582 2.88868 2.35662 24 - -
1950 1.38629 1.38629 1.38629 1.38629
1951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1952 25 0.23862 2.84929 2.43386 2.70756 25 - -
1953 1.38629 1.38629 1.38629 1.38629
1954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1955 26 2.57915 2.25909 2.64442 0.28946 26 - -
1956 1.38629 1.38629 1.38629 1.38629
1957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1958 27 2.53331 3.02441 0.20344 2.88069 27 - -
1959 1.38629 1.38629 1.38629 1.38629
1960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1961 28 2.57915 2.25909 2.64442 0.28946 28 - -
1962 1.38629 1.38629 1.38629 1.38629
1963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1964 29 2.81865 0.23582 2.88868 2.35662 29 - -
1965 1.38629 1.38629 1.38629 1.38629
1966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1967 30 2.57915 2.25909 2.64442 0.28946 30 - -
1968 1.38629 1.38629 1.38629 1.38629
1969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1970 31 2.53331 3.02441 0.20344 2.88069 31 - -
1971 1.38629 1.38629 1.38629 1.38629
1972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1973 32 2.81865 0.23582 2.88868 2.35662 32 - -
1974 1.38629 1.38629 1.38629 1.38629
1975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1976 33 2.81865 0.23582 2.88868 2.35662 33 - -
1977 1.38629 1.38629 1.38629 1.38629
1978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1979 34 2.57915 2.25909 2.64442 0.28946 34 - -
1980 1.38629 1.38629 1.38629 1.38629
1981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1982 35 2.81865 0.23582 2.88868 2.35662 35 - -
1983 1.38629 1.38629 1.38629 1.38629
1984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1985 36 0.23862 2.84929 2.43386 2.70756 36 - -
1986 1.38629 1.38629 1.38629 1.38629
1987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1988 37 2.53331 3.02441 0.20344 2.88069 37 - -
1989 1.38629 1.38629 1.38629 1.38629
1990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1991 38 2.81865 0.23582 2.88868 2.35662 38 - -
1992 1.38629 1.38629 1.38629 1.38629
1993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1994 39 2.53331 3.02441 0.20344 2.88069 39 - -
1995 1.38629 1.38629 1.38629 1.38629
1996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
1997 40 2.57915 2.25909 2.64442 0.28946 40 - -
1998 1.38629 1.38629 1.38629 1.38629
1999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2000 41 2.81865 0.23582 2.88868 2.35662 41 - -
2001 1.38629 1.38629 1.38629 1.38629
2002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2003 42 2.53331 3.02441 0.20344 2.88069 42 - -
2004 1.38629 1.38629 1.38629 1.38629
2005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2006 43 0.23862 2.84929 2.43386 2.70756 43 - -
2007 1.38629 1.38629 1.38629 1.38629
2008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2009 44 2.57915 2.25909 2.64442 0.28946 44 - -
2010 1.38629 1.38629 1.38629 1.38629
2011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2012 45 2.57915 2.25909 2.64442 0.28946 45 - -
2013 1.38629 1.38629 1.38629 1.38629
2014 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
2015 //
2016 HMMER3/b [3.0 | March 2010]
2017 NAME 3_End_Chlorophyta_58S_end_nine_long
2018 LENG 45
2019 ALPH DNA
2020 RF no
2021 CS no
2022 MAP yes
2023 DATE Sat Jan 28 01:07:08 2012
2024 NSEQ 8
2025 EFFN 3.128906
2026 CKSUM 2240641702
2027 STATS LOCAL MSV -8.0911 0.71933
2028 STATS LOCAL VITERBI -7.7425 0.71933
2029 STATS LOCAL FORWARD -4.1987 0.71933
2030 HMM A C G T
2031 m->m m->i m->d i->m i->i d->m d->d
2032 COMPO 1.82201 1.15564 1.14738 1.58000
2033 1.38629 1.38629 1.38629 1.38629
2034 0.03825 3.97573 3.97573 1.46634 0.26236 0.00000 *
2035 1 2.90228 3.52232 0.12458 3.42031 1 - -
2036 1.38629 1.38629 1.38629 1.38629
2037 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2038 2 3.35912 0.13939 3.41165 2.77481 2 - -
2039 1.38629 1.38629 1.38629 1.38629
2040 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2041 3 0.15066 3.31617 2.76009 3.21184 3 - -
2042 1.38629 1.38629 1.38629 1.38629
2043 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2044 4 3.35912 0.13939 3.41165 2.77481 4 - -
2045 1.38629 1.38629 1.38629 1.38629
2046 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2047 5 3.02437 2.55419 3.07496 0.18939 5 - -
2048 1.38629 1.38629 1.38629 1.38629
2049 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2050 6 3.35912 0.13939 3.41165 2.77481 6 - -
2051 1.38629 1.38629 1.38629 1.38629
2052 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2053 7 2.90228 3.52232 0.12458 3.42031 7 - -
2054 1.38629 1.38629 1.38629 1.38629
2055 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2056 8 0.15066 3.31617 2.76009 3.21184 8 - -
2057 1.38629 1.38629 1.38629 1.38629
2058 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2059 9 2.90228 3.52232 0.12458 3.42031 9 - -
2060 1.38629 1.38629 1.38629 1.38629
2061 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2062 10 2.90228 3.52232 0.12458 3.42031 10 - -
2063 1.38629 1.38629 1.38629 1.38629
2064 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2065 11 3.35912 0.13939 3.41165 2.77481 11 - -
2066 1.38629 1.38629 1.38629 1.38629
2067 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2068 12 3.02437 2.55419 3.07496 0.18939 12 - -
2069 1.38629 1.38629 1.38629 1.38629
2070 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2071 13 3.35912 0.13939 3.41165 2.77481 13 - -
2072 1.38629 1.38629 1.38629 1.38629
2073 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2074 14 3.35912 0.13939 3.41165 2.77481 14 - -
2075 1.38629 1.38629 1.38629 1.38629
2076 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2077 15 2.90228 3.52232 0.12458 3.42031 15 - -
2078 1.38629 1.38629 1.38629 1.38629
2079 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2080 16 2.90228 3.52232 0.12458 3.42031 16 - -
2081 1.38629 1.38629 1.38629 1.38629
2082 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2083 17 3.35912 0.13939 3.41165 2.77481 17 - -
2084 1.38629 1.38629 1.38629 1.38629
2085 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2086 18 3.35912 0.13939 3.41165 2.77481 18 - -
2087 1.38629 1.38629 1.38629 1.38629
2088 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2089 19 2.90228 3.52232 0.12458 3.42031 19 - -
2090 1.38629 1.38629 1.38629 1.38629
2091 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2092 20 0.15066 3.31617 2.76009 3.21184 20 - -
2093 1.38629 1.38629 1.38629 1.38629
2094 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2095 21 2.90228 3.52232 0.12458 3.42031 21 - -
2096 1.38629 1.38629 1.38629 1.38629
2097 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2098 22 0.15066 3.31617 2.76009 3.21184 22 - -
2099 1.38629 1.38629 1.38629 1.38629
2100 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2101 23 2.90228 3.52232 0.12458 3.42031 23 - -
2102 1.38629 1.38629 1.38629 1.38629
2103 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2104 24 3.02437 2.55419 3.07496 0.18939 24 - -
2105 1.38629 1.38629 1.38629 1.38629
2106 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2107 25 0.15066 3.31617 2.76009 3.21184 25 - -
2108 1.38629 1.38629 1.38629 1.38629
2109 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2110 26 3.02437 2.55419 3.07496 0.18939 26 - -
2111 1.38629 1.38629 1.38629 1.38629
2112 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2113 27 2.90228 3.52232 0.12458 3.42031 27 - -
2114 1.38629 1.38629 1.38629 1.38629
2115 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2116 28 3.02437 2.55419 3.07496 0.18939 28 - -
2117 1.38629 1.38629 1.38629 1.38629
2118 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2119 29 3.35912 0.13939 3.41165 2.77481 29 - -
2120 1.38629 1.38629 1.38629 1.38629
2121 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2122 30 3.02437 2.55419 3.07496 0.18939 30 - -
2123 1.38629 1.38629 1.38629 1.38629
2124 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2125 31 2.90228 3.52232 0.12458 3.42031 31 - -
2126 1.38629 1.38629 1.38629 1.38629
2127 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2128 32 3.35912 0.13939 3.41165 2.77481 32 - -
2129 1.38629 1.38629 1.38629 1.38629
2130 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2131 33 3.35912 0.13939 3.41165 2.77481 33 - -
2132 1.38629 1.38629 1.38629 1.38629
2133 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2134 34 3.02437 2.55419 3.07496 0.18939 34 - -
2135 1.38629 1.38629 1.38629 1.38629
2136 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2137 35 3.35912 0.13939 3.41165 2.77481 35 - -
2138 1.38629 1.38629 1.38629 1.38629
2139 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2140 36 0.15066 3.31617 2.76009 3.21184 36 - -
2141 1.38629 1.38629 1.38629 1.38629
2142 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2143 37 2.90228 3.52232 0.12458 3.42031 37 - -
2144 1.38629 1.38629 1.38629 1.38629
2145 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2146 38 3.35912 0.13939 3.41165 2.77481 38 - -
2147 1.38629 1.38629 1.38629 1.38629
2148 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2149 39 2.90228 3.52232 0.12458 3.42031 39 - -
2150 1.38629 1.38629 1.38629 1.38629
2151 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2152 40 3.02437 2.55419 3.07496 0.18939 40 - -
2153 1.38629 1.38629 1.38629 1.38629
2154 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2155 41 3.35912 0.13939 3.41165 2.77481 41 - -
2156 1.38629 1.38629 1.38629 1.38629
2157 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2158 42 2.90228 3.52232 0.12458 3.42031 42 - -
2159 1.38629 1.38629 1.38629 1.38629
2160 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2161 43 2.90228 3.52232 0.12458 3.42031 43 - -
2162 1.38629 1.38629 1.38629 1.38629
2163 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2164 44 3.35912 0.13939 3.41165 2.77481 44 - -
2165 1.38629 1.38629 1.38629 1.38629
2166 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
2167 45 3.02437 2.55419 3.07496 0.18939 45 - -
2168 1.38629 1.38629 1.38629 1.38629
2169 0.01931 3.95679 * 1.46634 0.26236 0.00000 *
2170 //
2171 HMMER3/b [3.0 | March 2010]
2172 NAME 3_End_Chlorophyta_58S_end_onea_long
2173 LENG 45
2174 ALPH DNA
2175 RF no
2176 CS no
2177 MAP yes
2178 DATE Sat Jan 28 01:03:35 2012
2179 NSEQ 2
2180 EFFN 2.000000
2181 CKSUM 2817009518
2182 STATS LOCAL MSV -7.3765 0.72757
2183 STATS LOCAL VITERBI -8.2230 0.72757
2184 STATS LOCAL FORWARD -3.3891 0.72757
2185 HMM A C G T
2186 m->m m->i m->d i->m i->i d->m d->d
2187 COMPO 1.66659 1.24202 1.21600 1.48769
2188 1.38629 1.38629 1.38629 1.38629
2189 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
2190 1 2.53331 3.02441 0.20344 2.88069 1 - -
2191 1.38629 1.38629 1.38629 1.38629
2192 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2193 2 2.81865 0.23582 2.88868 2.35662 2 - -
2194 1.38629 1.38629 1.38629 1.38629
2195 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2196 3 2.53331 3.02441 0.20344 2.88069 3 - -
2197 1.38629 1.38629 1.38629 1.38629
2198 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2199 4 2.53331 3.02441 0.20344 2.88069 4 - -
2200 1.38629 1.38629 1.38629 1.38629
2201 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2202 5 2.57915 2.25909 2.64442 0.28946 5 - -
2203 1.38629 1.38629 1.38629 1.38629
2204 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2205 6 2.53331 3.02441 0.20344 2.88069 6 - -
2206 1.38629 1.38629 1.38629 1.38629
2207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2208 7 0.23862 2.84929 2.43386 2.70756 7 - -
2209 1.38629 1.38629 1.38629 1.38629
2210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2211 8 0.23862 2.84929 2.43386 2.70756 8 - -
2212 1.38629 1.38629 1.38629 1.38629
2213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2214 9 2.53331 3.02441 0.20344 2.88069 9 - -
2215 1.38629 1.38629 1.38629 1.38629
2216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2217 10 2.53331 3.02441 0.20344 2.88069 10 - -
2218 1.38629 1.38629 1.38629 1.38629
2219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2220 11 2.81865 0.23582 2.88868 2.35662 11 - -
2221 1.38629 1.38629 1.38629 1.38629
2222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2223 12 2.81865 0.23582 2.88868 2.35662 12 - -
2224 1.38629 1.38629 1.38629 1.38629
2225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2226 13 2.57915 2.25909 2.64442 0.28946 13 - -
2227 1.38629 1.38629 1.38629 1.38629
2228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2229 14 2.81865 0.23582 2.88868 2.35662 14 - -
2230 1.38629 1.38629 1.38629 1.38629
2231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2232 15 2.53331 3.02441 0.20344 2.88069 15 - -
2233 1.38629 1.38629 1.38629 1.38629
2234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2235 16 2.53331 3.02441 0.20344 2.88069 16 - -
2236 1.38629 1.38629 1.38629 1.38629
2237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2238 17 2.81865 0.23582 2.88868 2.35662 17 - -
2239 1.38629 1.38629 1.38629 1.38629
2240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2241 18 2.57915 2.25909 2.64442 0.28946 18 - -
2242 1.38629 1.38629 1.38629 1.38629
2243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2244 19 0.23862 2.84929 2.43386 2.70756 19 - -
2245 1.38629 1.38629 1.38629 1.38629
2246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2247 20 2.81865 0.23582 2.88868 2.35662 20 - -
2248 1.38629 1.38629 1.38629 1.38629
2249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2250 21 2.81865 0.23582 2.88868 2.35662 21 - -
2251 1.38629 1.38629 1.38629 1.38629
2252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2253 22 0.23862 2.84929 2.43386 2.70756 22 - -
2254 1.38629 1.38629 1.38629 1.38629
2255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2256 23 2.81865 0.23582 2.88868 2.35662 23 - -
2257 1.38629 1.38629 1.38629 1.38629
2258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2259 24 2.81865 0.23582 2.88868 2.35662 24 - -
2260 1.38629 1.38629 1.38629 1.38629
2261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2262 25 0.23862 2.84929 2.43386 2.70756 25 - -
2263 1.38629 1.38629 1.38629 1.38629
2264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2265 26 2.57915 2.25909 2.64442 0.28946 26 - -
2266 1.38629 1.38629 1.38629 1.38629
2267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2268 27 2.81865 0.23582 2.88868 2.35662 27 - -
2269 1.38629 1.38629 1.38629 1.38629
2270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2271 28 2.57915 2.25909 2.64442 0.28946 28 - -
2272 1.38629 1.38629 1.38629 1.38629
2273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2274 29 2.81865 0.23582 2.88868 2.35662 29 - -
2275 1.38629 1.38629 1.38629 1.38629
2276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2277 30 2.57915 2.25909 2.64442 0.28946 30 - -
2278 1.38629 1.38629 1.38629 1.38629
2279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2280 31 2.53331 3.02441 0.20344 2.88069 31 - -
2281 1.38629 1.38629 1.38629 1.38629
2282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2283 32 2.53331 3.02441 0.20344 2.88069 32 - -
2284 1.38629 1.38629 1.38629 1.38629
2285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2286 33 2.57915 2.25909 2.64442 0.28946 33 - -
2287 1.38629 1.38629 1.38629 1.38629
2288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2289 34 2.57915 2.25909 2.64442 0.28946 34 - -
2290 1.38629 1.38629 1.38629 1.38629
2291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2292 35 2.81865 0.23582 2.88868 2.35662 35 - -
2293 1.38629 1.38629 1.38629 1.38629
2294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2295 36 0.23862 2.84929 2.43386 2.70756 36 - -
2296 1.38629 1.38629 1.38629 1.38629
2297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2298 37 2.53331 3.02441 0.20344 2.88069 37 - -
2299 1.38629 1.38629 1.38629 1.38629
2300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2301 38 2.81865 0.23582 2.88868 2.35662 38 - -
2302 1.38629 1.38629 1.38629 1.38629
2303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2304 39 2.53331 3.02441 0.20344 2.88069 39 - -
2305 1.38629 1.38629 1.38629 1.38629
2306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2307 40 2.57915 2.25909 2.64442 0.28946 40 - -
2308 1.38629 1.38629 1.38629 1.38629
2309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2310 41 2.81865 0.23582 2.88868 2.35662 41 - -
2311 1.38629 1.38629 1.38629 1.38629
2312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2313 42 2.53331 3.02441 0.20344 2.88069 42 - -
2314 1.38629 1.38629 1.38629 1.38629
2315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2316 43 0.23862 2.84929 2.43386 2.70756 43 - -
2317 1.38629 1.38629 1.38629 1.38629
2318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2319 44 2.57915 2.25909 2.64442 0.28946 44 - -
2320 1.38629 1.38629 1.38629 1.38629
2321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2322 45 2.53331 3.02441 0.20344 2.88069 45 - -
2323 1.38629 1.38629 1.38629 1.38629
2324 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
2325 //
2326 HMMER3/b [3.0 | March 2010]
2327 NAME 3_End_Chlorophyta_58S_end_onec_long
2328 LENG 45
2329 ALPH DNA
2330 RF no
2331 CS no
2332 MAP yes
2333 DATE Sat Jan 28 01:03:55 2012
2334 NSEQ 3
2335 EFFN 3.000000
2336 CKSUM 1434293828
2337 STATS LOCAL MSV -8.0810 0.72041
2338 STATS LOCAL VITERBI -7.9114 0.72041
2339 STATS LOCAL FORWARD -4.0225 0.72041
2340 HMM A C G T
2341 m->m m->i m->d i->m i->i d->m d->d
2342 COMPO 1.62529 1.31451 1.19507 1.46163
2343 1.38629 1.38629 1.38629 1.38629
2344 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
2345 1 2.86982 3.47591 0.13017 3.36931 1 - -
2346 1.38629 1.38629 1.38629 1.38629
2347 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2348 2 3.30705 0.14631 3.36166 2.73626 2 - -
2349 1.38629 1.38629 1.38629 1.38629
2350 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2351 3 2.86982 3.47591 0.13017 3.36931 3 - -
2352 1.38629 1.38629 1.38629 1.38629
2353 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2354 4 2.86982 3.47591 0.13017 3.36931 4 - -
2355 1.38629 1.38629 1.38629 1.38629
2356 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2357 5 2.97980 2.52563 3.03204 0.19727 5 - -
2358 1.38629 1.38629 1.38629 1.38629
2359 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2360 6 2.86982 3.47591 0.13017 3.36931 6 - -
2361 1.38629 1.38629 1.38629 1.38629
2362 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2363 7 0.15719 3.27118 2.73043 3.16274 7 - -
2364 1.38629 1.38629 1.38629 1.38629
2365 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2366 8 0.15719 3.27118 2.73043 3.16274 8 - -
2367 1.38629 1.38629 1.38629 1.38629
2368 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2369 9 2.86982 3.47591 0.13017 3.36931 9 - -
2370 1.38629 1.38629 1.38629 1.38629
2371 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2372 10 2.86982 3.47591 0.13017 3.36931 10 - -
2373 1.38629 1.38629 1.38629 1.38629
2374 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2375 11 3.30705 0.14631 3.36166 2.73626 11 - -
2376 1.38629 1.38629 1.38629 1.38629
2377 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2378 12 2.97980 2.52563 3.03204 0.19727 12 - -
2379 1.38629 1.38629 1.38629 1.38629
2380 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2381 13 2.97980 2.52563 3.03204 0.19727 13 - -
2382 1.38629 1.38629 1.38629 1.38629
2383 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2384 14 3.30705 0.14631 3.36166 2.73626 14 - -
2385 1.38629 1.38629 1.38629 1.38629
2386 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2387 15 2.86982 3.47591 0.13017 3.36931 15 - -
2388 1.38629 1.38629 1.38629 1.38629
2389 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2390 16 2.86982 3.47591 0.13017 3.36931 16 - -
2391 1.38629 1.38629 1.38629 1.38629
2392 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2393 17 3.30705 0.14631 3.36166 2.73626 17 - -
2394 1.38629 1.38629 1.38629 1.38629
2395 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2396 18 2.43088 1.34923 2.50068 0.56112 18 - -
2397 1.38629 1.38629 1.38629 1.38629
2398 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2399 19 0.15719 3.27118 2.73043 3.16274 19 - -
2400 1.38629 1.38629 1.38629 1.38629
2401 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2402 20 0.15719 3.27118 2.73043 3.16274 20 - -
2403 1.38629 1.38629 1.38629 1.38629
2404 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2405 21 3.30705 0.14631 3.36166 2.73626 21 - -
2406 1.38629 1.38629 1.38629 1.38629
2407 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2408 22 0.15719 3.27118 2.73043 3.16274 22 - -
2409 1.38629 1.38629 1.38629 1.38629
2410 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2411 23 3.30705 0.14631 3.36166 2.73626 23 - -
2412 1.38629 1.38629 1.38629 1.38629
2413 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2414 24 3.30705 0.14631 3.36166 2.73626 24 - -
2415 1.38629 1.38629 1.38629 1.38629
2416 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2417 25 0.15719 3.27118 2.73043 3.16274 25 - -
2418 1.38629 1.38629 1.38629 1.38629
2419 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2420 26 2.97980 2.52563 3.03204 0.19727 26 - -
2421 1.38629 1.38629 1.38629 1.38629
2422 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2423 27 3.30705 0.14631 3.36166 2.73626 27 - -
2424 1.38629 1.38629 1.38629 1.38629
2425 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2426 28 2.97980 2.52563 3.03204 0.19727 28 - -
2427 1.38629 1.38629 1.38629 1.38629
2428 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2429 29 3.30705 0.14631 3.36166 2.73626 29 - -
2430 1.38629 1.38629 1.38629 1.38629
2431 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2432 30 2.97980 2.52563 3.03204 0.19727 30 - -
2433 1.38629 1.38629 1.38629 1.38629
2434 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2435 31 2.86982 3.47591 0.13017 3.36931 31 - -
2436 1.38629 1.38629 1.38629 1.38629
2437 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2438 32 2.86982 3.47591 0.13017 3.36931 32 - -
2439 1.38629 1.38629 1.38629 1.38629
2440 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2441 33 2.97980 2.52563 3.03204 0.19727 33 - -
2442 1.38629 1.38629 1.38629 1.38629
2443 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2444 34 2.97980 2.52563 3.03204 0.19727 34 - -
2445 1.38629 1.38629 1.38629 1.38629
2446 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2447 35 3.30705 0.14631 3.36166 2.73626 35 - -
2448 1.38629 1.38629 1.38629 1.38629
2449 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2450 36 0.15719 3.27118 2.73043 3.16274 36 - -
2451 1.38629 1.38629 1.38629 1.38629
2452 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2453 37 2.86982 3.47591 0.13017 3.36931 37 - -
2454 1.38629 1.38629 1.38629 1.38629
2455 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2456 38 3.30705 0.14631 3.36166 2.73626 38 - -
2457 1.38629 1.38629 1.38629 1.38629
2458 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2459 39 2.86982 3.47591 0.13017 3.36931 39 - -
2460 1.38629 1.38629 1.38629 1.38629
2461 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2462 40 2.97980 2.52563 3.03204 0.19727 40 - -
2463 1.38629 1.38629 1.38629 1.38629
2464 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2465 41 3.30705 0.14631 3.36166 2.73626 41 - -
2466 1.38629 1.38629 1.38629 1.38629
2467 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2468 42 2.86982 3.47591 0.13017 3.36931 42 - -
2469 1.38629 1.38629 1.38629 1.38629
2470 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2471 43 0.15719 3.27118 2.73043 3.16274 43 - -
2472 1.38629 1.38629 1.38629 1.38629
2473 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2474 44 2.97980 2.52563 3.03204 0.19727 44 - -
2475 1.38629 1.38629 1.38629 1.38629
2476 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
2477 45 2.86982 3.47591 0.13017 3.36931 45 - -
2478 1.38629 1.38629 1.38629 1.38629
2479 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
2480 //
2481 HMMER3/b [3.0 | March 2010]
2482 NAME 3_End_Chlorophyta_58S_end_oned_long
2483 LENG 45
2484 ALPH DNA
2485 RF no
2486 CS no
2487 MAP yes
2488 DATE Sat Jan 28 01:04:07 2012
2489 NSEQ 2
2490 EFFN 2.000000
2491 CKSUM 468697630
2492 STATS LOCAL MSV -7.3499 0.72735
2493 STATS LOCAL VITERBI -8.3054 0.72735
2494 STATS LOCAL FORWARD -3.4738 0.72735
2495 HMM A C G T
2496 m->m m->i m->d i->m i->i d->m d->d
2497 COMPO 1.66060 1.40893 1.07299 1.49796
2498 1.38629 1.38629 1.38629 1.38629
2499 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
2500 1 2.53331 3.02441 0.20344 2.88069 1 - -
2501 1.38629 1.38629 1.38629 1.38629
2502 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2503 2 2.81865 0.23582 2.88868 2.35662 2 - -
2504 1.38629 1.38629 1.38629 1.38629
2505 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2506 3 2.53331 3.02441 0.20344 2.88069 3 - -
2507 1.38629 1.38629 1.38629 1.38629
2508 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2509 4 2.81865 0.23582 2.88868 2.35662 4 - -
2510 1.38629 1.38629 1.38629 1.38629
2511 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2512 5 2.57915 2.25909 2.64442 0.28946 5 - -
2513 1.38629 1.38629 1.38629 1.38629
2514 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2515 6 2.53331 3.02441 0.20344 2.88069 6 - -
2516 1.38629 1.38629 1.38629 1.38629
2517 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2518 7 2.53331 3.02441 0.20344 2.88069 7 - -
2519 1.38629 1.38629 1.38629 1.38629
2520 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2521 8 0.23862 2.84929 2.43386 2.70756 8 - -
2522 1.38629 1.38629 1.38629 1.38629
2523 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2524 9 2.53331 3.02441 0.20344 2.88069 9 - -
2525 1.38629 1.38629 1.38629 1.38629
2526 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2527 10 2.53331 3.02441 0.20344 2.88069 10 - -
2528 1.38629 1.38629 1.38629 1.38629
2529 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2530 11 2.81865 0.23582 2.88868 2.35662 11 - -
2531 1.38629 1.38629 1.38629 1.38629
2532 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2533 12 2.57915 2.25909 2.64442 0.28946 12 - -
2534 1.38629 1.38629 1.38629 1.38629
2535 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2536 13 2.57915 2.25909 2.64442 0.28946 13 - -
2537 1.38629 1.38629 1.38629 1.38629
2538 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2539 14 2.81865 0.23582 2.88868 2.35662 14 - -
2540 1.38629 1.38629 1.38629 1.38629
2541 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2542 15 2.53331 3.02441 0.20344 2.88069 15 - -
2543 1.38629 1.38629 1.38629 1.38629
2544 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2545 16 2.53331 3.02441 0.20344 2.88069 16 - -
2546 1.38629 1.38629 1.38629 1.38629
2547 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2548 17 2.81865 0.23582 2.88868 2.35662 17 - -
2549 1.38629 1.38629 1.38629 1.38629
2550 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2551 18 2.57915 2.25909 2.64442 0.28946 18 - -
2552 1.38629 1.38629 1.38629 1.38629
2553 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2554 19 2.53331 3.02441 0.20344 2.88069 19 - -
2555 1.38629 1.38629 1.38629 1.38629
2556 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2557 20 0.23862 2.84929 2.43386 2.70756 20 - -
2558 1.38629 1.38629 1.38629 1.38629
2559 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2560 21 2.81865 0.23582 2.88868 2.35662 21 - -
2561 1.38629 1.38629 1.38629 1.38629
2562 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2563 22 0.23862 2.84929 2.43386 2.70756 22 - -
2564 1.38629 1.38629 1.38629 1.38629
2565 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2566 23 2.53331 3.02441 0.20344 2.88069 23 - -
2567 1.38629 1.38629 1.38629 1.38629
2568 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2569 24 2.81865 0.23582 2.88868 2.35662 24 - -
2570 1.38629 1.38629 1.38629 1.38629
2571 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2572 25 0.23862 2.84929 2.43386 2.70756 25 - -
2573 1.38629 1.38629 1.38629 1.38629
2574 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2575 26 2.57915 2.25909 2.64442 0.28946 26 - -
2576 1.38629 1.38629 1.38629 1.38629
2577 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2578 27 2.53331 3.02441 0.20344 2.88069 27 - -
2579 1.38629 1.38629 1.38629 1.38629
2580 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2581 28 2.57915 2.25909 2.64442 0.28946 28 - -
2582 1.38629 1.38629 1.38629 1.38629
2583 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2584 29 2.81865 0.23582 2.88868 2.35662 29 - -
2585 1.38629 1.38629 1.38629 1.38629
2586 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2587 30 2.57915 2.25909 2.64442 0.28946 30 - -
2588 1.38629 1.38629 1.38629 1.38629
2589 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2590 31 2.53331 3.02441 0.20344 2.88069 31 - -
2591 1.38629 1.38629 1.38629 1.38629
2592 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2593 32 2.53331 3.02441 0.20344 2.88069 32 - -
2594 1.38629 1.38629 1.38629 1.38629
2595 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2596 33 0.23862 2.84929 2.43386 2.70756 33 - -
2597 1.38629 1.38629 1.38629 1.38629
2598 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2599 34 2.57915 2.25909 2.64442 0.28946 34 - -
2600 1.38629 1.38629 1.38629 1.38629
2601 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2602 35 2.81865 0.23582 2.88868 2.35662 35 - -
2603 1.38629 1.38629 1.38629 1.38629
2604 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2605 36 0.23862 2.84929 2.43386 2.70756 36 - -
2606 1.38629 1.38629 1.38629 1.38629
2607 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2608 37 2.53331 3.02441 0.20344 2.88069 37 - -
2609 1.38629 1.38629 1.38629 1.38629
2610 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2611 38 2.81865 0.23582 2.88868 2.35662 38 - -
2612 1.38629 1.38629 1.38629 1.38629
2613 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2614 39 2.53331 3.02441 0.20344 2.88069 39 - -
2615 1.38629 1.38629 1.38629 1.38629
2616 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2617 40 2.57915 2.25909 2.64442 0.28946 40 - -
2618 1.38629 1.38629 1.38629 1.38629
2619 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2620 41 2.81865 0.23582 2.88868 2.35662 41 - -
2621 1.38629 1.38629 1.38629 1.38629
2622 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2623 42 2.53331 3.02441 0.20344 2.88069 42 - -
2624 1.38629 1.38629 1.38629 1.38629
2625 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2626 43 0.23862 2.84929 2.43386 2.70756 43 - -
2627 1.38629 1.38629 1.38629 1.38629
2628 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2629 44 2.57915 2.25909 2.64442 0.28946 44 - -
2630 1.38629 1.38629 1.38629 1.38629
2631 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2632 45 2.53331 3.02441 0.20344 2.88069 45 - -
2633 1.38629 1.38629 1.38629 1.38629
2634 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
2635 //
2636 HMMER3/b [3.0 | March 2010]
2637 NAME 3_End_Chlorophyta_58S_end_onee_long
2638 LENG 45
2639 ALPH DNA
2640 RF no
2641 CS no
2642 MAP yes
2643 DATE Sat Jan 28 01:04:21 2012
2644 NSEQ 2
2645 EFFN 2.000000
2646 CKSUM 2249999661
2647 STATS LOCAL MSV -7.5609 0.72738
2648 STATS LOCAL VITERBI -8.2838 0.72738
2649 STATS LOCAL FORWARD -3.3217 0.72738
2650 HMM A C G T
2651 m->m m->i m->d i->m i->i d->m d->d
2652 COMPO 1.66646 1.24503 1.16756 1.55104
2653 1.38629 1.38629 1.38629 1.38629
2654 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
2655 1 2.53331 3.02441 0.20344 2.88069 1 - -
2656 1.38629 1.38629 1.38629 1.38629
2657 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2658 2 2.81865 0.23582 2.88868 2.35662 2 - -
2659 1.38629 1.38629 1.38629 1.38629
2660 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2661 3 2.53331 3.02441 0.20344 2.88069 3 - -
2662 1.38629 1.38629 1.38629 1.38629
2663 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2664 4 2.81865 0.23582 2.88868 2.35662 4 - -
2665 1.38629 1.38629 1.38629 1.38629
2666 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2667 5 2.57915 2.25909 2.64442 0.28946 5 - -
2668 1.38629 1.38629 1.38629 1.38629
2669 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2670 6 2.81865 0.23582 2.88868 2.35662 6 - -
2671 1.38629 1.38629 1.38629 1.38629
2672 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2673 7 2.53331 3.02441 0.20344 2.88069 7 - -
2674 1.38629 1.38629 1.38629 1.38629
2675 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2676 8 0.23862 2.84929 2.43386 2.70756 8 - -
2677 1.38629 1.38629 1.38629 1.38629
2678 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2679 9 2.53331 3.02441 0.20344 2.88069 9 - -
2680 1.38629 1.38629 1.38629 1.38629
2681 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2682 10 2.53331 3.02441 0.20344 2.88069 10 - -
2683 1.38629 1.38629 1.38629 1.38629
2684 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2685 11 2.81865 0.23582 2.88868 2.35662 11 - -
2686 1.38629 1.38629 1.38629 1.38629
2687 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2688 12 0.23862 2.84929 2.43386 2.70756 12 - -
2689 1.38629 1.38629 1.38629 1.38629
2690 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2691 13 2.57915 2.25909 2.64442 0.28946 13 - -
2692 1.38629 1.38629 1.38629 1.38629
2693 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2694 14 2.81865 0.23582 2.88868 2.35662 14 - -
2695 1.38629 1.38629 1.38629 1.38629
2696 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2697 15 2.57915 2.25909 2.64442 0.28946 15 - -
2698 1.38629 1.38629 1.38629 1.38629
2699 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2700 16 2.53331 3.02441 0.20344 2.88069 16 - -
2701 1.38629 1.38629 1.38629 1.38629
2702 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2703 17 2.81865 0.23582 2.88868 2.35662 17 - -
2704 1.38629 1.38629 1.38629 1.38629
2705 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2706 18 2.81865 0.23582 2.88868 2.35662 18 - -
2707 1.38629 1.38629 1.38629 1.38629
2708 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2709 19 2.53331 3.02441 0.20344 2.88069 19 - -
2710 1.38629 1.38629 1.38629 1.38629
2711 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2712 20 0.23862 2.84929 2.43386 2.70756 20 - -
2713 1.38629 1.38629 1.38629 1.38629
2714 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2715 21 2.53331 3.02441 0.20344 2.88069 21 - -
2716 1.38629 1.38629 1.38629 1.38629
2717 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2718 22 0.23862 2.84929 2.43386 2.70756 22 - -
2719 1.38629 1.38629 1.38629 1.38629
2720 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2721 23 2.53331 3.02441 0.20344 2.88069 23 - -
2722 1.38629 1.38629 1.38629 1.38629
2723 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2724 24 2.81865 0.23582 2.88868 2.35662 24 - -
2725 1.38629 1.38629 1.38629 1.38629
2726 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2727 25 0.23862 2.84929 2.43386 2.70756 25 - -
2728 1.38629 1.38629 1.38629 1.38629
2729 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2730 26 2.57915 2.25909 2.64442 0.28946 26 - -
2731 1.38629 1.38629 1.38629 1.38629
2732 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2733 27 2.53331 3.02441 0.20344 2.88069 27 - -
2734 1.38629 1.38629 1.38629 1.38629
2735 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2736 28 2.57915 2.25909 2.64442 0.28946 28 - -
2737 1.38629 1.38629 1.38629 1.38629
2738 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2739 29 2.81865 0.23582 2.88868 2.35662 29 - -
2740 1.38629 1.38629 1.38629 1.38629
2741 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2742 30 2.57915 2.25909 2.64442 0.28946 30 - -
2743 1.38629 1.38629 1.38629 1.38629
2744 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2745 31 2.53331 3.02441 0.20344 2.88069 31 - -
2746 1.38629 1.38629 1.38629 1.38629
2747 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2748 32 2.81865 0.23582 2.88868 2.35662 32 - -
2749 1.38629 1.38629 1.38629 1.38629
2750 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2751 33 2.81865 0.23582 2.88868 2.35662 33 - -
2752 1.38629 1.38629 1.38629 1.38629
2753 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2754 34 2.57915 2.25909 2.64442 0.28946 34 - -
2755 1.38629 1.38629 1.38629 1.38629
2756 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2757 35 2.81865 0.23582 2.88868 2.35662 35 - -
2758 1.38629 1.38629 1.38629 1.38629
2759 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2760 36 0.23862 2.84929 2.43386 2.70756 36 - -
2761 1.38629 1.38629 1.38629 1.38629
2762 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2763 37 2.53331 3.02441 0.20344 2.88069 37 - -
2764 1.38629 1.38629 1.38629 1.38629
2765 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2766 38 2.81865 0.23582 2.88868 2.35662 38 - -
2767 1.38629 1.38629 1.38629 1.38629
2768 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2769 39 2.53331 3.02441 0.20344 2.88069 39 - -
2770 1.38629 1.38629 1.38629 1.38629
2771 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2772 40 2.57915 2.25909 2.64442 0.28946 40 - -
2773 1.38629 1.38629 1.38629 1.38629
2774 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2775 41 2.81865 0.23582 2.88868 2.35662 41 - -
2776 1.38629 1.38629 1.38629 1.38629
2777 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2778 42 2.53331 3.02441 0.20344 2.88069 42 - -
2779 1.38629 1.38629 1.38629 1.38629
2780 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2781 43 0.23862 2.84929 2.43386 2.70756 43 - -
2782 1.38629 1.38629 1.38629 1.38629
2783 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2784 44 2.57915 2.25909 2.64442 0.28946 44 - -
2785 1.38629 1.38629 1.38629 1.38629
2786 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
2787 45 2.53331 3.02441 0.20344 2.88069 45 - -
2788 1.38629 1.38629 1.38629 1.38629
2789 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
2790 //
2791 HMMER3/b [3.0 | March 2010]
2792 NAME 3_End_Chlorophyta_58S_end_seven_long
2793 LENG 45
2794 ALPH DNA
2795 RF no
2796 CS no
2797 MAP yes
2798 DATE Sat Jan 28 01:06:49 2012
2799 NSEQ 50
2800 EFFN 3.720093
2801 CKSUM 357463622
2802 STATS LOCAL MSV -6.8679 0.71933
2803 STATS LOCAL VITERBI -7.7200 0.71933
2804 STATS LOCAL FORWARD -4.4179 0.71933
2805 HMM A C G T
2806 m->m m->i m->d i->m i->i d->m d->d
2807 COMPO 1.55975 1.15919 1.26176 1.64550
2808 1.38629 1.38629 1.38629 1.38629
2809 0.03437 4.08094 4.08094 1.46634 0.26236 0.00000 *
2810 1 3.56985 0.11502 3.61331 2.92754 1 - -
2811 1.38629 1.38629 1.38629 1.38629
2812 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2813 2 3.56985 0.11502 3.61331 2.92754 2 - -
2814 1.38629 1.38629 1.38629 1.38629
2815 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2816 3 3.02897 3.70726 0.10488 3.62466 3 - -
2817 1.38629 1.38629 1.38629 1.38629
2818 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2819 4 3.02897 3.70726 0.10488 3.62466 4 - -
2820 1.38629 1.38629 1.38629 1.38629
2821 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2822 5 3.21060 2.67254 3.25402 0.16020 5 - -
2823 1.38629 1.38629 1.38629 1.38629
2824 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2825 6 3.56985 0.11502 3.61331 2.92754 6 - -
2826 1.38629 1.38629 1.38629 1.38629
2827 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2828 7 3.02897 3.70726 0.10488 3.62466 7 - -
2829 1.38629 1.38629 1.38629 1.38629
2830 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2831 8 0.12711 3.49946 2.87886 3.41264 8 - -
2832 1.38629 1.38629 1.38629 1.38629
2833 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2834 9 1.93380 0.79778 1.32089 1.97922 9 - -
2835 1.38629 1.38629 1.38629 1.38629
2836 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2837 10 2.13834 2.44062 2.72922 0.31502 10 - -
2838 1.38629 1.38629 1.38629 1.38629
2839 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2840 11 3.56985 0.11502 3.61331 2.92754 11 - -
2841 1.38629 1.38629 1.38629 1.38629
2842 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2843 12 3.21060 2.67254 3.25402 0.16020 12 - -
2844 1.38629 1.38629 1.38629 1.38629
2845 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2846 13 3.08820 2.36855 3.13664 0.20166 13 - -
2847 1.38629 1.38629 1.38629 1.38629
2848 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2849 14 3.56985 0.11502 3.61331 2.92754 14 - -
2850 1.38629 1.38629 1.38629 1.38629
2851 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2852 15 3.02897 3.70726 0.10488 3.62466 15 - -
2853 1.38629 1.38629 1.38629 1.38629
2854 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2855 16 3.02897 3.70726 0.10488 3.62466 16 - -
2856 1.38629 1.38629 1.38629 1.38629
2857 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2858 17 0.27334 2.87968 2.58561 2.22878 17 - -
2859 1.38629 1.38629 1.38629 1.38629
2860 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2861 18 2.03406 1.52747 0.81004 1.57372 18 - -
2862 1.38629 1.38629 1.38629 1.38629
2863 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2864 19 3.02897 3.70726 0.10488 3.62466 19 - -
2865 1.38629 1.38629 1.38629 1.38629
2866 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2867 20 0.12711 3.49946 2.87886 3.41264 20 - -
2868 1.38629 1.38629 1.38629 1.38629
2869 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2870 21 3.02897 3.70726 0.10488 3.62466 21 - -
2871 1.38629 1.38629 1.38629 1.38629
2872 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2873 22 0.12711 3.49946 2.87886 3.41264 22 - -
2874 1.38629 1.38629 1.38629 1.38629
2875 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2876 23 3.56985 0.11502 3.61331 2.92754 23 - -
2877 1.38629 1.38629 1.38629 1.38629
2878 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2879 24 3.56985 0.11502 3.61331 2.92754 24 - -
2880 1.38629 1.38629 1.38629 1.38629
2881 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2882 25 0.12711 3.49946 2.87886 3.41264 25 - -
2883 1.38629 1.38629 1.38629 1.38629
2884 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2885 26 3.56985 0.11502 3.61331 2.92754 26 - -
2886 1.38629 1.38629 1.38629 1.38629
2887 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2888 27 0.12711 3.49946 2.87886 3.41264 27 - -
2889 1.38629 1.38629 1.38629 1.38629
2890 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2891 28 3.21060 2.67254 3.25402 0.16020 28 - -
2892 1.38629 1.38629 1.38629 1.38629
2893 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2894 29 3.56985 0.11502 3.61331 2.92754 29 - -
2895 1.38629 1.38629 1.38629 1.38629
2896 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2897 30 3.21060 2.67254 3.25402 0.16020 30 - -
2898 1.38629 1.38629 1.38629 1.38629
2899 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2900 31 3.02897 3.70726 0.10488 3.62466 31 - -
2901 1.38629 1.38629 1.38629 1.38629
2902 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2903 32 3.33940 0.16483 3.39119 2.49090 32 - -
2904 1.38629 1.38629 1.38629 1.38629
2905 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2906 33 3.56985 0.11502 3.61331 2.92754 33 - -
2907 1.38629 1.38629 1.38629 1.38629
2908 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2909 34 3.21060 2.67254 3.25402 0.16020 34 - -
2910 1.38629 1.38629 1.38629 1.38629
2911 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2912 35 3.56985 0.11502 3.61331 2.92754 35 - -
2913 1.38629 1.38629 1.38629 1.38629
2914 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2915 36 0.12711 3.49946 2.87886 3.41264 36 - -
2916 1.38629 1.38629 1.38629 1.38629
2917 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2918 37 3.02897 3.70726 0.10488 3.62466 37 - -
2919 1.38629 1.38629 1.38629 1.38629
2920 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2921 38 3.56985 0.11502 3.61331 2.92754 38 - -
2922 1.38629 1.38629 1.38629 1.38629
2923 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2924 39 3.02897 3.70726 0.10488 3.62466 39 - -
2925 1.38629 1.38629 1.38629 1.38629
2926 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2927 40 3.21060 2.67254 3.25402 0.16020 40 - -
2928 1.38629 1.38629 1.38629 1.38629
2929 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2930 41 3.56985 0.11502 3.61331 2.92754 41 - -
2931 1.38629 1.38629 1.38629 1.38629
2932 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2933 42 3.02897 3.70726 0.10488 3.62466 42 - -
2934 1.38629 1.38629 1.38629 1.38629
2935 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2936 43 3.02897 3.70726 0.10488 3.62466 43 - -
2937 1.38629 1.38629 1.38629 1.38629
2938 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2939 44 0.28650 3.01784 1.93054 2.89794 44 - -
2940 1.38629 1.38629 1.38629 1.38629
2941 0.03437 4.08094 4.08094 1.46634 0.26236 1.09861 0.40547
2942 45 0.12711 3.49946 2.87886 3.41264 45 - -
2943 1.38629 1.38629 1.38629 1.38629
2944 0.01733 4.06390 * 1.46634 0.26236 0.00000 *
2945 //
2946 HMMER3/b [3.0 | March 2010]
2947 NAME 3_End_Chlorophyta_58S_end_seventeena_long
2948 LENG 45
2949 ALPH DNA
2950 RF no
2951 CS no
2952 MAP yes
2953 DATE Sat Jan 28 01:10:11 2012
2954 NSEQ 29
2955 EFFN 3.451538
2956 CKSUM 3894991408
2957 STATS LOCAL MSV -7.0988 0.71933
2958 STATS LOCAL VITERBI -7.8238 0.71933
2959 STATS LOCAL FORWARD -3.7643 0.71933
2960 HMM A C G T
2961 m->m m->i m->d i->m i->i d->m d->d
2962 COMPO 1.92953 1.07117 1.03558 1.85051
2963 1.38629 1.38629 1.38629 1.38629
2964 0.03603 4.03451 4.03451 1.46634 0.26236 0.00000 *
2965 1 3.47958 0.12480 3.52704 2.86271 1 - -
2966 1.38629 1.38629 1.38629 1.38629
2967 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
2968 2 3.47958 0.12480 3.52704 2.86271 2 - -
2969 1.38629 1.38629 1.38629 1.38629
2970 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
2971 3 3.12956 2.62116 3.17614 0.17222 3 - -
2972 1.38629 1.38629 1.38629 1.38629
2973 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
2974 4 3.06193 0.23335 3.12238 2.14323 4 - -
2975 1.38629 1.38629 1.38629 1.38629
2976 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
2977 5 2.97217 0.26645 3.03499 2.00519 5 - -
2978 1.38629 1.38629 1.38629 1.38629
2979 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
2980 6 3.31033 0.16208 3.36320 2.54466 6 - -
2981 1.38629 1.38629 1.38629 1.38629
2982 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
2983 7 2.57191 0.52728 2.64282 1.33850 7 - -
2984 1.38629 1.38629 1.38629 1.38629
2985 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
2986 8 3.12956 2.62116 3.17614 0.17222 8 - -
2987 1.38629 1.38629 1.38629 1.38629
2988 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
2989 9 3.04620 0.23880 3.10708 2.11894 9 - -
2990 1.38629 1.38629 1.38629 1.38629
2991 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
2992 10 2.97549 3.62857 0.11279 3.53751 10 - -
2993 1.38629 1.38629 1.38629 1.38629
2994 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
2995 11 3.47958 0.12480 3.52704 2.86271 11 - -
2996 1.38629 1.38629 1.38629 1.38629
2997 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
2998 12 3.47958 0.12480 3.52704 2.86271 12 - -
2999 1.38629 1.38629 1.38629 1.38629
3000 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3001 13 2.50245 1.28434 2.57140 0.57119 13 - -
3002 1.38629 1.38629 1.38629 1.38629
3003 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3004 14 2.80379 1.91051 2.86272 0.30884 14 - -
3005 1.38629 1.38629 1.38629 1.38629
3006 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3007 15 3.47958 0.12480 3.52704 2.86271 15 - -
3008 1.38629 1.38629 1.38629 1.38629
3009 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3010 16 2.97549 3.62857 0.11279 3.53751 16 - -
3011 1.38629 1.38629 1.38629 1.38629
3012 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3013 17 2.97549 3.62857 0.11279 3.53751 17 - -
3014 1.38629 1.38629 1.38629 1.38629
3015 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3016 18 2.97549 3.62857 0.11279 3.53751 18 - -
3017 1.38629 1.38629 1.38629 1.38629
3018 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3019 19 3.47958 0.12480 3.52704 2.86271 19 - -
3020 1.38629 1.38629 1.38629 1.38629
3021 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3022 20 2.97549 3.62857 0.11279 3.53751 20 - -
3023 1.38629 1.38629 1.38629 1.38629
3024 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3025 21 2.97549 3.62857 0.11279 3.53751 21 - -
3026 1.38629 1.38629 1.38629 1.38629
3027 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3028 22 0.13668 3.42064 2.82809 3.32616 22 - -
3029 1.38629 1.38629 1.38629 1.38629
3030 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3031 23 2.97549 3.62857 0.11279 3.53751 23 - -
3032 1.38629 1.38629 1.38629 1.38629
3033 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3034 24 2.97549 3.62857 0.11279 3.53751 24 - -
3035 1.38629 1.38629 1.38629 1.38629
3036 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3037 25 2.97549 3.62857 0.11279 3.53751 25 - -
3038 1.38629 1.38629 1.38629 1.38629
3039 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3040 26 0.13668 3.42064 2.82809 3.32616 26 - -
3041 1.38629 1.38629 1.38629 1.38629
3042 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3043 27 2.97549 3.62857 0.11279 3.53751 27 - -
3044 1.38629 1.38629 1.38629 1.38629
3045 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3046 28 2.97549 3.62857 0.11279 3.53751 28 - -
3047 1.38629 1.38629 1.38629 1.38629
3048 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3049 29 0.13668 3.42064 2.82809 3.32616 29 - -
3050 1.38629 1.38629 1.38629 1.38629
3051 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3052 30 3.47958 0.12480 3.52704 2.86271 30 - -
3053 1.38629 1.38629 1.38629 1.38629
3054 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3055 31 2.97549 3.62857 0.11279 3.53751 31 - -
3056 1.38629 1.38629 1.38629 1.38629
3057 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3058 32 3.47958 0.12480 3.52704 2.86271 32 - -
3059 1.38629 1.38629 1.38629 1.38629
3060 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3061 33 2.97549 3.62857 0.11279 3.53751 33 - -
3062 1.38629 1.38629 1.38629 1.38629
3063 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3064 34 3.12956 2.62116 3.17614 0.17222 34 - -
3065 1.38629 1.38629 1.38629 1.38629
3066 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3067 35 3.47958 0.12480 3.52704 2.86271 35 - -
3068 1.38629 1.38629 1.38629 1.38629
3069 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3070 36 2.97549 3.62857 0.11279 3.53751 36 - -
3071 1.38629 1.38629 1.38629 1.38629
3072 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3073 37 2.97549 3.62857 0.11279 3.53751 37 - -
3074 1.38629 1.38629 1.38629 1.38629
3075 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3076 38 3.47958 0.12480 3.52704 2.86271 38 - -
3077 1.38629 1.38629 1.38629 1.38629
3078 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3079 39 2.97549 3.62857 0.11279 3.53751 39 - -
3080 1.38629 1.38629 1.38629 1.38629
3081 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3082 40 0.13668 3.42064 2.82809 3.32616 40 - -
3083 1.38629 1.38629 1.38629 1.38629
3084 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3085 41 3.47958 0.12480 3.52704 2.86271 41 - -
3086 1.38629 1.38629 1.38629 1.38629
3087 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3088 42 0.13668 3.42064 2.82809 3.32616 42 - -
3089 1.38629 1.38629 1.38629 1.38629
3090 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3091 43 3.12956 2.62116 3.17614 0.17222 43 - -
3092 1.38629 1.38629 1.38629 1.38629
3093 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3094 44 3.47958 0.12480 3.52704 2.86271 44 - -
3095 1.38629 1.38629 1.38629 1.38629
3096 0.03603 4.03451 4.03451 1.46634 0.26236 1.09861 0.40547
3097 45 2.97549 3.62857 0.11279 3.53751 45 - -
3098 1.38629 1.38629 1.38629 1.38629
3099 0.01818 4.01666 * 1.46634 0.26236 0.00000 *
3100 //
3101 HMMER3/b [3.0 | March 2010]
3102 NAME 3_End_Chlorophyta_58S_end_seventeenb_long
3103 LENG 45
3104 ALPH DNA
3105 RF no
3106 CS no
3107 MAP yes
3108 DATE Sat Jan 28 01:10:17 2012
3109 NSEQ 2
3110 EFFN 2.000000
3111 CKSUM 249208300
3112 STATS LOCAL MSV -7.6792 0.72790
3113 STATS LOCAL VITERBI -8.3766 0.72790
3114 STATS LOCAL FORWARD -3.4913 0.72790
3115 HMM A C G T
3116 m->m m->i m->d i->m i->i d->m d->d
3117 COMPO 1.81799 1.27937 1.06160 1.54396
3118 1.38629 1.38629 1.38629 1.38629
3119 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
3120 1 2.53331 3.02441 0.20344 2.88069 1 - -
3121 1.38629 1.38629 1.38629 1.38629
3122 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3123 2 2.57915 2.25909 2.64442 0.28946 2 - -
3124 1.38629 1.38629 1.38629 1.38629
3125 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3126 3 2.81865 0.23582 2.88868 2.35662 3 - -
3127 1.38629 1.38629 1.38629 1.38629
3128 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3129 4 2.81865 0.23582 2.88868 2.35662 4 - -
3130 1.38629 1.38629 1.38629 1.38629
3131 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3132 5 2.57915 2.25909 2.64442 0.28946 5 - -
3133 1.38629 1.38629 1.38629 1.38629
3134 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3135 6 2.57915 2.25909 2.64442 0.28946 6 - -
3136 1.38629 1.38629 1.38629 1.38629
3137 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3138 7 1.88179 1.10717 1.04597 1.79675 7 - -
3139 1.38629 1.38629 1.38629 1.38629
3140 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3141 8 2.81865 0.23582 2.88868 2.35662 8 - -
3142 1.38629 1.38629 1.38629 1.38629
3143 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3144 9 2.57915 2.25909 2.64442 0.28946 9 - -
3145 1.38629 1.38629 1.38629 1.38629
3146 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3147 10 2.57915 2.25909 2.64442 0.28946 10 - -
3148 1.38629 1.38629 1.38629 1.38629
3149 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3150 11 2.81865 0.23582 2.88868 2.35662 11 - -
3151 1.38629 1.38629 1.38629 1.38629
3152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3153 12 2.53331 3.02441 0.20344 2.88069 12 - -
3154 1.38629 1.38629 1.38629 1.38629
3155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3156 13 2.81865 0.23582 2.88868 2.35662 13 - -
3157 1.38629 1.38629 1.38629 1.38629
3158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3159 14 2.57915 2.25909 2.64442 0.28946 14 - -
3160 1.38629 1.38629 1.38629 1.38629
3161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3162 15 2.57915 2.25909 2.64442 0.28946 15 - -
3163 1.38629 1.38629 1.38629 1.38629
3164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3165 16 2.81865 0.23582 2.88868 2.35662 16 - -
3166 1.38629 1.38629 1.38629 1.38629
3167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3168 17 2.53331 3.02441 0.20344 2.88069 17 - -
3169 1.38629 1.38629 1.38629 1.38629
3170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3171 18 2.53331 3.02441 0.20344 2.88069 18 - -
3172 1.38629 1.38629 1.38629 1.38629
3173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3174 19 2.81865 0.23582 2.88868 2.35662 19 - -
3175 1.38629 1.38629 1.38629 1.38629
3176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3177 20 2.53331 3.02441 0.20344 2.88069 20 - -
3178 1.38629 1.38629 1.38629 1.38629
3179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3180 21 2.53331 3.02441 0.20344 2.88069 21 - -
3181 1.38629 1.38629 1.38629 1.38629
3182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3183 22 0.23862 2.84929 2.43386 2.70756 22 - -
3184 1.38629 1.38629 1.38629 1.38629
3185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3186 23 2.53331 3.02441 0.20344 2.88069 23 - -
3187 1.38629 1.38629 1.38629 1.38629
3188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3189 24 2.53331 3.02441 0.20344 2.88069 24 - -
3190 1.38629 1.38629 1.38629 1.38629
3191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3192 25 2.53331 3.02441 0.20344 2.88069 25 - -
3193 1.38629 1.38629 1.38629 1.38629
3194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3195 26 0.23862 2.84929 2.43386 2.70756 26 - -
3196 1.38629 1.38629 1.38629 1.38629
3197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3198 27 2.53331 3.02441 0.20344 2.88069 27 - -
3199 1.38629 1.38629 1.38629 1.38629
3200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3201 28 2.53331 3.02441 0.20344 2.88069 28 - -
3202 1.38629 1.38629 1.38629 1.38629
3203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3204 29 0.23862 2.84929 2.43386 2.70756 29 - -
3205 1.38629 1.38629 1.38629 1.38629
3206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3207 30 2.81865 0.23582 2.88868 2.35662 30 - -
3208 1.38629 1.38629 1.38629 1.38629
3209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3210 31 2.53331 3.02441 0.20344 2.88069 31 - -
3211 1.38629 1.38629 1.38629 1.38629
3212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3213 32 2.81865 0.23582 2.88868 2.35662 32 - -
3214 1.38629 1.38629 1.38629 1.38629
3215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3216 33 2.53331 3.02441 0.20344 2.88069 33 - -
3217 1.38629 1.38629 1.38629 1.38629
3218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3219 34 2.57915 2.25909 2.64442 0.28946 34 - -
3220 1.38629 1.38629 1.38629 1.38629
3221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3222 35 2.81865 0.23582 2.88868 2.35662 35 - -
3223 1.38629 1.38629 1.38629 1.38629
3224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3225 36 2.53331 3.02441 0.20344 2.88069 36 - -
3226 1.38629 1.38629 1.38629 1.38629
3227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3228 37 2.53331 3.02441 0.20344 2.88069 37 - -
3229 1.38629 1.38629 1.38629 1.38629
3230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3231 38 2.81865 0.23582 2.88868 2.35662 38 - -
3232 1.38629 1.38629 1.38629 1.38629
3233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3234 39 2.53331 3.02441 0.20344 2.88069 39 - -
3235 1.38629 1.38629 1.38629 1.38629
3236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3237 40 0.23862 2.84929 2.43386 2.70756 40 - -
3238 1.38629 1.38629 1.38629 1.38629
3239 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3240 41 2.81865 0.23582 2.88868 2.35662 41 - -
3241 1.38629 1.38629 1.38629 1.38629
3242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3243 42 0.23862 2.84929 2.43386 2.70756 42 - -
3244 1.38629 1.38629 1.38629 1.38629
3245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3246 43 2.57915 2.25909 2.64442 0.28946 43 - -
3247 1.38629 1.38629 1.38629 1.38629
3248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3249 44 2.81865 0.23582 2.88868 2.35662 44 - -
3250 1.38629 1.38629 1.38629 1.38629
3251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3252 45 2.53331 3.02441 0.20344 2.88069 45 - -
3253 1.38629 1.38629 1.38629 1.38629
3254 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
3255 //
3256 HMMER3/b [3.0 | March 2010]
3257 NAME 3_End_Chlorophyta_58S_end_six_long
3258 LENG 45
3259 ALPH DNA
3260 RF no
3261 CS no
3262 MAP yes
3263 DATE Sat Jan 28 01:06:39 2012
3264 NSEQ 17
3265 EFFN 3.980225
3266 CKSUM 2906984672
3267 STATS LOCAL MSV -6.7869 0.71932
3268 STATS LOCAL VITERBI -7.5454 0.71932
3269 STATS LOCAL FORWARD -4.0611 0.71932
3270 HMM A C G T
3271 m->m m->i m->d i->m i->i d->m d->d
3272 COMPO 1.85715 1.19405 1.09141 1.58401
3273 1.38629 1.38629 1.38629 1.38629
3274 0.03290 4.12394 4.12394 1.46634 0.26236 0.00000 *
3275 1 3.07541 3.77607 0.09847 3.70103 1 - -
3276 1.38629 1.38629 1.38629 1.38629
3277 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3278 2 3.64943 0.10712 3.68925 2.98409 2 - -
3279 1.38629 1.38629 1.38629 1.38629
3280 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3281 3 3.07541 3.77607 0.09847 3.70103 3 - -
3282 1.38629 1.38629 1.38629 1.38629
3283 0.12050 4.12394 2.32951 1.46634 0.26236 1.09861 0.40547
3284 4 2.22469 1.56800 0.55225 2.22762 4 - -
3285 1.38629 1.38629 1.38629 1.38629
3286 0.03586 4.03929 4.03929 1.46634 0.26236 0.28702 1.38830
3287 5 3.28389 2.71903 3.32443 0.15014 5 - -
3288 1.38629 1.38629 1.38629 1.38629
3289 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3290 6 3.64943 0.10712 3.68925 2.98409 6 - -
3291 1.38629 1.38629 1.38629 1.38629
3292 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3293 7 3.07541 3.77607 0.09847 3.70103 7 - -
3294 1.38629 1.38629 1.38629 1.38629
3295 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3296 8 0.28744 2.20718 2.59167 2.73466 8 - -
3297 1.38629 1.38629 1.38629 1.38629
3298 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3299 9 3.07541 3.77607 0.09847 3.70103 9 - -
3300 1.38629 1.38629 1.38629 1.38629
3301 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3302 10 3.07541 3.77607 0.09847 3.70103 10 - -
3303 1.38629 1.38629 1.38629 1.38629
3304 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3305 11 3.64943 0.10712 3.68925 2.98409 11 - -
3306 1.38629 1.38629 1.38629 1.38629
3307 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3308 12 3.28389 2.71903 3.32443 0.15014 12 - -
3309 1.38629 1.38629 1.38629 1.38629
3310 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3311 13 2.86749 1.79659 2.92573 0.32342 13 - -
3312 1.38629 1.38629 1.38629 1.38629
3313 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3314 14 3.64943 0.10712 3.68925 2.98409 14 - -
3315 1.38629 1.38629 1.38629 1.38629
3316 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3317 15 3.07541 3.77607 0.09847 3.70103 15 - -
3318 1.38629 1.38629 1.38629 1.38629
3319 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3320 16 3.07541 3.77607 0.09847 3.70103 16 - -
3321 1.38629 1.38629 1.38629 1.38629
3322 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3323 17 3.64943 0.10712 3.68925 2.98409 17 - -
3324 1.38629 1.38629 1.38629 1.38629
3325 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3326 18 3.64943 0.10712 3.68925 2.98409 18 - -
3327 1.38629 1.38629 1.38629 1.38629
3328 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3329 19 0.33002 2.97170 1.76064 2.84832 19 - -
3330 1.38629 1.38629 1.38629 1.38629
3331 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3332 20 0.11925 3.56948 2.92381 3.48959 20 - -
3333 1.38629 1.38629 1.38629 1.38629
3334 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3335 21 3.07541 3.77607 0.09847 3.70103 21 - -
3336 1.38629 1.38629 1.38629 1.38629
3337 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3338 22 0.11925 3.56948 2.92381 3.48959 22 - -
3339 1.38629 1.38629 1.38629 1.38629
3340 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3341 23 2.40105 0.49799 1.64417 2.22143 23 - -
3342 1.38629 1.38629 1.38629 1.38629
3343 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3344 24 3.64943 0.10712 3.68925 2.98409 24 - -
3345 1.38629 1.38629 1.38629 1.38629
3346 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3347 25 0.11925 3.56948 2.92381 3.48959 25 - -
3348 1.38629 1.38629 1.38629 1.38629
3349 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3350 26 3.28389 2.71903 3.32443 0.15014 26 - -
3351 1.38629 1.38629 1.38629 1.38629
3352 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3353 27 3.07541 3.77607 0.09847 3.70103 27 - -
3354 1.38629 1.38629 1.38629 1.38629
3355 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3356 28 3.28389 2.71903 3.32443 0.15014 28 - -
3357 1.38629 1.38629 1.38629 1.38629
3358 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3359 29 3.17166 0.22292 3.22923 2.13454 29 - -
3360 1.38629 1.38629 1.38629 1.38629
3361 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3362 30 3.28389 2.71903 3.32443 0.15014 30 - -
3363 1.38629 1.38629 1.38629 1.38629
3364 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3365 31 3.07541 3.77607 0.09847 3.70103 31 - -
3366 1.38629 1.38629 1.38629 1.38629
3367 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3368 32 3.64943 0.10712 3.68925 2.98409 32 - -
3369 1.38629 1.38629 1.38629 1.38629
3370 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3371 33 3.64943 0.10712 3.68925 2.98409 33 - -
3372 1.38629 1.38629 1.38629 1.38629
3373 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3374 34 3.28389 2.71903 3.32443 0.15014 34 - -
3375 1.38629 1.38629 1.38629 1.38629
3376 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3377 35 3.64943 0.10712 3.68925 2.98409 35 - -
3378 1.38629 1.38629 1.38629 1.38629
3379 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3380 36 0.11925 3.56948 2.92381 3.48959 36 - -
3381 1.38629 1.38629 1.38629 1.38629
3382 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3383 37 3.07541 3.77607 0.09847 3.70103 37 - -
3384 1.38629 1.38629 1.38629 1.38629
3385 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3386 38 3.64943 0.10712 3.68925 2.98409 38 - -
3387 1.38629 1.38629 1.38629 1.38629
3388 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3389 39 3.07541 3.77607 0.09847 3.70103 39 - -
3390 1.38629 1.38629 1.38629 1.38629
3391 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3392 40 3.28389 2.71903 3.32443 0.15014 40 - -
3393 1.38629 1.38629 1.38629 1.38629
3394 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3395 41 3.64943 0.10712 3.68925 2.98409 41 - -
3396 1.38629 1.38629 1.38629 1.38629
3397 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3398 42 3.07541 3.77607 0.09847 3.70103 42 - -
3399 1.38629 1.38629 1.38629 1.38629
3400 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3401 43 3.07541 3.77607 0.09847 3.70103 43 - -
3402 1.38629 1.38629 1.38629 1.38629
3403 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3404 44 2.38060 2.30790 1.57434 0.50934 44 - -
3405 1.38629 1.38629 1.38629 1.38629
3406 0.03290 4.12394 4.12394 1.46634 0.26236 1.09861 0.40547
3407 45 2.34746 2.51922 0.48655 1.56482 45 - -
3408 1.38629 1.38629 1.38629 1.38629
3409 0.01658 4.10763 * 1.46634 0.26236 0.00000 *
3410 //
3411 HMMER3/b [3.0 | March 2010]
3412 NAME 3_End_Chlorophyta_58S_end_sixteena_long
3413 LENG 45
3414 ALPH DNA
3415 RF no
3416 CS no
3417 MAP yes
3418 DATE Sat Jan 28 01:09:41 2012
3419 NSEQ 6
3420 EFFN 3.260742
3421 CKSUM 3078536325
3422 STATS LOCAL MSV -8.1805 0.71933
3423 STATS LOCAL VITERBI -7.9042 0.71933
3424 STATS LOCAL FORWARD -3.9223 0.71933
3425 HMM A C G T
3426 m->m m->i m->d i->m i->i d->m d->d
3427 COMPO 1.82150 1.14689 1.17178 1.55695
3428 1.38629 1.38629 1.38629 1.38629
3429 0.03731 4.00017 4.00017 1.46634 0.26236 0.00000 *
3430 1 3.41001 0.13300 3.46044 2.81215 1 - -
3431 1.38629 1.38629 1.38629 1.38629
3432 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3433 2 2.93350 3.56738 0.11941 3.46995 2 - -
3434 1.38629 1.38629 1.38629 1.38629
3435 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3436 3 3.06843 2.58230 3.11735 0.18196 3 - -
3437 1.38629 1.38629 1.38629 1.38629
3438 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3439 4 3.41001 0.13300 3.46044 2.81215 4 - -
3440 1.38629 1.38629 1.38629 1.38629
3441 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3442 5 3.41001 0.13300 3.46044 2.81215 5 - -
3443 1.38629 1.38629 1.38629 1.38629
3444 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3445 6 3.41001 0.13300 3.46044 2.81215 6 - -
3446 1.38629 1.38629 1.38629 1.38629
3447 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3448 7 3.06843 2.58230 3.11735 0.18196 7 - -
3449 1.38629 1.38629 1.38629 1.38629
3450 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3451 8 3.06843 2.58230 3.11735 0.18196 8 - -
3452 1.38629 1.38629 1.38629 1.38629
3453 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3454 9 3.41001 0.13300 3.46044 2.81215 9 - -
3455 1.38629 1.38629 1.38629 1.38629
3456 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3457 10 2.93350 3.56738 0.11941 3.46995 10 - -
3458 1.38629 1.38629 1.38629 1.38629
3459 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3460 11 3.41001 0.13300 3.46044 2.81215 11 - -
3461 1.38629 1.38629 1.38629 1.38629
3462 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3463 12 0.14457 3.36023 2.78889 3.26000 12 - -
3464 1.38629 1.38629 1.38629 1.38629
3465 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3466 13 2.93350 3.56738 0.11941 3.46995 13 - -
3467 1.38629 1.38629 1.38629 1.38629
3468 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3469 14 3.41001 0.13300 3.46044 2.81215 14 - -
3470 1.38629 1.38629 1.38629 1.38629
3471 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3472 15 3.06843 2.58230 3.11735 0.18196 15 - -
3473 1.38629 1.38629 1.38629 1.38629
3474 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3475 16 3.06843 2.58230 3.11735 0.18196 16 - -
3476 1.38629 1.38629 1.38629 1.38629
3477 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3478 17 3.41001 0.13300 3.46044 2.81215 17 - -
3479 1.38629 1.38629 1.38629 1.38629
3480 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3481 18 2.13978 2.25773 0.68256 1.30045 18 - -
3482 1.38629 1.38629 1.38629 1.38629
3483 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3484 19 2.93350 3.56738 0.11941 3.46995 19 - -
3485 1.38629 1.38629 1.38629 1.38629
3486 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3487 20 3.06843 2.58230 3.11735 0.18196 20 - -
3488 1.38629 1.38629 1.38629 1.38629
3489 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3490 21 3.06843 2.58230 3.11735 0.18196 21 - -
3491 1.38629 1.38629 1.38629 1.38629
3492 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3493 22 2.93350 3.56738 0.11941 3.46995 22 - -
3494 1.38629 1.38629 1.38629 1.38629
3495 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3496 23 3.41001 0.13300 3.46044 2.81215 23 - -
3497 1.38629 1.38629 1.38629 1.38629
3498 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3499 24 0.14457 3.36023 2.78889 3.26000 24 - -
3500 1.38629 1.38629 1.38629 1.38629
3501 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3502 25 0.14457 3.36023 2.78889 3.26000 25 - -
3503 1.38629 1.38629 1.38629 1.38629
3504 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3505 26 2.93350 3.56738 0.11941 3.46995 26 - -
3506 1.38629 1.38629 1.38629 1.38629
3507 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3508 27 2.93350 3.56738 0.11941 3.46995 27 - -
3509 1.38629 1.38629 1.38629 1.38629
3510 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3511 28 2.93350 3.56738 0.11941 3.46995 28 - -
3512 1.38629 1.38629 1.38629 1.38629
3513 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3514 29 2.93350 3.56738 0.11941 3.46995 29 - -
3515 1.38629 1.38629 1.38629 1.38629
3516 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3517 30 3.41001 0.13300 3.46044 2.81215 30 - -
3518 1.38629 1.38629 1.38629 1.38629
3519 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3520 31 2.93350 3.56738 0.11941 3.46995 31 - -
3521 1.38629 1.38629 1.38629 1.38629
3522 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3523 32 3.41001 0.13300 3.46044 2.81215 32 - -
3524 1.38629 1.38629 1.38629 1.38629
3525 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3526 33 2.93350 3.56738 0.11941 3.46995 33 - -
3527 1.38629 1.38629 1.38629 1.38629
3528 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3529 34 3.06843 2.58230 3.11735 0.18196 34 - -
3530 1.38629 1.38629 1.38629 1.38629
3531 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3532 35 3.41001 0.13300 3.46044 2.81215 35 - -
3533 1.38629 1.38629 1.38629 1.38629
3534 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3535 36 2.93350 3.56738 0.11941 3.46995 36 - -
3536 1.38629 1.38629 1.38629 1.38629
3537 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3538 37 2.93350 3.56738 0.11941 3.46995 37 - -
3539 1.38629 1.38629 1.38629 1.38629
3540 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3541 38 3.41001 0.13300 3.46044 2.81215 38 - -
3542 1.38629 1.38629 1.38629 1.38629
3543 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3544 39 0.14457 3.36023 2.78889 3.26000 39 - -
3545 1.38629 1.38629 1.38629 1.38629
3546 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3547 40 0.14457 3.36023 2.78889 3.26000 40 - -
3548 1.38629 1.38629 1.38629 1.38629
3549 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3550 41 3.41001 0.13300 3.46044 2.81215 41 - -
3551 1.38629 1.38629 1.38629 1.38629
3552 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3553 42 0.14457 3.36023 2.78889 3.26000 42 - -
3554 1.38629 1.38629 1.38629 1.38629
3555 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3556 43 3.06843 2.58230 3.11735 0.18196 43 - -
3557 1.38629 1.38629 1.38629 1.38629
3558 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3559 44 3.41001 0.13300 3.46044 2.81215 44 - -
3560 1.38629 1.38629 1.38629 1.38629
3561 0.03731 4.00017 4.00017 1.46634 0.26236 1.09861 0.40547
3562 45 2.93350 3.56738 0.11941 3.46995 45 - -
3563 1.38629 1.38629 1.38629 1.38629
3564 0.01883 3.98169 * 1.46634 0.26236 0.00000 *
3565 //
3566 HMMER3/b [3.0 | March 2010]
3567 NAME 3_End_Chlorophyta_58S_end_sixteenb_long
3568 LENG 45
3569 ALPH DNA
3570 RF no
3571 CS no
3572 MAP yes
3573 DATE Sat Jan 28 01:09:50 2012
3574 NSEQ 3
3575 EFFN 3.000000
3576 CKSUM 3471750801
3577 STATS LOCAL MSV -8.0728 0.71994
3578 STATS LOCAL VITERBI -7.9293 0.71994
3579 STATS LOCAL FORWARD -3.8206 0.71994
3580 HMM A C G T
3581 m->m m->i m->d i->m i->i d->m d->d
3582 COMPO 1.81571 1.20993 1.15028 1.50278
3583 1.38629 1.38629 1.38629 1.38629
3584 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
3585 1 2.97980 2.52563 3.03204 0.19727 1 - -
3586 1.38629 1.38629 1.38629 1.38629
3587 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3588 2 3.30705 0.14631 3.36166 2.73626 2 - -
3589 1.38629 1.38629 1.38629 1.38629
3590 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3591 3 3.30705 0.14631 3.36166 2.73626 3 - -
3592 1.38629 1.38629 1.38629 1.38629
3593 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3594 4 3.30705 0.14631 3.36166 2.73626 4 - -
3595 1.38629 1.38629 1.38629 1.38629
3596 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3597 5 2.97980 2.52563 3.03204 0.19727 5 - -
3598 1.38629 1.38629 1.38629 1.38629
3599 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3600 6 2.97980 2.52563 3.03204 0.19727 6 - -
3601 1.38629 1.38629 1.38629 1.38629
3602 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3603 7 3.30705 0.14631 3.36166 2.73626 7 - -
3604 1.38629 1.38629 1.38629 1.38629
3605 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3606 8 2.86982 3.47591 0.13017 3.36931 8 - -
3607 1.38629 1.38629 1.38629 1.38629
3608 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3609 9 3.30705 0.14631 3.36166 2.73626 9 - -
3610 1.38629 1.38629 1.38629 1.38629
3611 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3612 10 0.15719 3.27118 2.73043 3.16274 10 - -
3613 1.38629 1.38629 1.38629 1.38629
3614 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3615 11 2.86982 3.47591 0.13017 3.36931 11 - -
3616 1.38629 1.38629 1.38629 1.38629
3617 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3618 12 2.97980 2.52563 3.03204 0.19727 12 - -
3619 1.38629 1.38629 1.38629 1.38629
3620 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3621 13 3.30705 0.14631 3.36166 2.73626 13 - -
3622 1.38629 1.38629 1.38629 1.38629
3623 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3624 14 2.97980 2.52563 3.03204 0.19727 14 - -
3625 1.38629 1.38629 1.38629 1.38629
3626 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3627 15 2.97980 2.52563 3.03204 0.19727 15 - -
3628 1.38629 1.38629 1.38629 1.38629
3629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3630 16 3.30705 0.14631 3.36166 2.73626 16 - -
3631 1.38629 1.38629 1.38629 1.38629
3632 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3633 17 2.86982 3.47591 0.13017 3.36931 17 - -
3634 1.38629 1.38629 1.38629 1.38629
3635 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3636 18 2.86982 3.47591 0.13017 3.36931 18 - -
3637 1.38629 1.38629 1.38629 1.38629
3638 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3639 19 2.86982 3.47591 0.13017 3.36931 19 - -
3640 1.38629 1.38629 1.38629 1.38629
3641 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3642 20 2.97980 2.52563 3.03204 0.19727 20 - -
3643 1.38629 1.38629 1.38629 1.38629
3644 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3645 21 2.97980 2.52563 3.03204 0.19727 21 - -
3646 1.38629 1.38629 1.38629 1.38629
3647 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3648 22 2.86982 3.47591 0.13017 3.36931 22 - -
3649 1.38629 1.38629 1.38629 1.38629
3650 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3651 23 3.30705 0.14631 3.36166 2.73626 23 - -
3652 1.38629 1.38629 1.38629 1.38629
3653 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3654 24 0.15719 3.27118 2.73043 3.16274 24 - -
3655 1.38629 1.38629 1.38629 1.38629
3656 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3657 25 0.15719 3.27118 2.73043 3.16274 25 - -
3658 1.38629 1.38629 1.38629 1.38629
3659 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3660 26 2.86982 3.47591 0.13017 3.36931 26 - -
3661 1.38629 1.38629 1.38629 1.38629
3662 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3663 27 2.86982 3.47591 0.13017 3.36931 27 - -
3664 1.38629 1.38629 1.38629 1.38629
3665 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3666 28 2.86982 3.47591 0.13017 3.36931 28 - -
3667 1.38629 1.38629 1.38629 1.38629
3668 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3669 29 2.86982 3.47591 0.13017 3.36931 29 - -
3670 1.38629 1.38629 1.38629 1.38629
3671 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3672 30 3.30705 0.14631 3.36166 2.73626 30 - -
3673 1.38629 1.38629 1.38629 1.38629
3674 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3675 31 2.86982 3.47591 0.13017 3.36931 31 - -
3676 1.38629 1.38629 1.38629 1.38629
3677 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3678 32 3.30705 0.14631 3.36166 2.73626 32 - -
3679 1.38629 1.38629 1.38629 1.38629
3680 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3681 33 2.86982 3.47591 0.13017 3.36931 33 - -
3682 1.38629 1.38629 1.38629 1.38629
3683 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3684 34 2.97980 2.52563 3.03204 0.19727 34 - -
3685 1.38629 1.38629 1.38629 1.38629
3686 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3687 35 3.30705 0.14631 3.36166 2.73626 35 - -
3688 1.38629 1.38629 1.38629 1.38629
3689 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3690 36 2.86982 3.47591 0.13017 3.36931 36 - -
3691 1.38629 1.38629 1.38629 1.38629
3692 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3693 37 2.86982 3.47591 0.13017 3.36931 37 - -
3694 1.38629 1.38629 1.38629 1.38629
3695 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3696 38 3.30705 0.14631 3.36166 2.73626 38 - -
3697 1.38629 1.38629 1.38629 1.38629
3698 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3699 39 0.15719 3.27118 2.73043 3.16274 39 - -
3700 1.38629 1.38629 1.38629 1.38629
3701 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3702 40 0.15719 3.27118 2.73043 3.16274 40 - -
3703 1.38629 1.38629 1.38629 1.38629
3704 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3705 41 3.30705 0.14631 3.36166 2.73626 41 - -
3706 1.38629 1.38629 1.38629 1.38629
3707 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3708 42 0.15719 3.27118 2.73043 3.16274 42 - -
3709 1.38629 1.38629 1.38629 1.38629
3710 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3711 43 2.97980 2.52563 3.03204 0.19727 43 - -
3712 1.38629 1.38629 1.38629 1.38629
3713 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3714 44 3.30705 0.14631 3.36166 2.73626 44 - -
3715 1.38629 1.38629 1.38629 1.38629
3716 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
3717 45 2.86982 3.47591 0.13017 3.36931 45 - -
3718 1.38629 1.38629 1.38629 1.38629
3719 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
3720 //
3721 HMMER3/b [3.0 | March 2010]
3722 NAME 3_End_Chlorophyta_58S_end_sixteenc_long
3723 LENG 45
3724 ALPH DNA
3725 RF no
3726 CS no
3727 MAP yes
3728 DATE Sat Jan 28 01:09:56 2012
3729 NSEQ 2
3730 EFFN 2.000000
3731 CKSUM 4112059469
3732 STATS LOCAL MSV -7.5858 0.72737
3733 STATS LOCAL VITERBI -8.4289 0.72737
3734 STATS LOCAL FORWARD -3.3634 0.72737
3735 HMM A C G T
3736 m->m m->i m->d i->m i->i d->m d->d
3737 COMPO 1.74703 1.19425 1.17291 1.54500
3738 1.38629 1.38629 1.38629 1.38629
3739 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
3740 1 2.57915 2.25909 2.64442 0.28946 1 - -
3741 1.38629 1.38629 1.38629 1.38629
3742 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3743 2 2.81865 0.23582 2.88868 2.35662 2 - -
3744 1.38629 1.38629 1.38629 1.38629
3745 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3746 3 2.81865 0.23582 2.88868 2.35662 3 - -
3747 1.38629 1.38629 1.38629 1.38629
3748 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3749 4 2.81865 0.23582 2.88868 2.35662 4 - -
3750 1.38629 1.38629 1.38629 1.38629
3751 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3752 5 2.57915 2.25909 2.64442 0.28946 5 - -
3753 1.38629 1.38629 1.38629 1.38629
3754 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3755 6 2.57915 2.25909 2.64442 0.28946 6 - -
3756 1.38629 1.38629 1.38629 1.38629
3757 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3758 7 2.81865 0.23582 2.88868 2.35662 7 - -
3759 1.38629 1.38629 1.38629 1.38629
3760 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3761 8 2.53331 3.02441 0.20344 2.88069 8 - -
3762 1.38629 1.38629 1.38629 1.38629
3763 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3764 9 2.81865 0.23582 2.88868 2.35662 9 - -
3765 1.38629 1.38629 1.38629 1.38629
3766 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3767 10 0.23862 2.84929 2.43386 2.70756 10 - -
3768 1.38629 1.38629 1.38629 1.38629
3769 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3770 11 2.53331 3.02441 0.20344 2.88069 11 - -
3771 1.38629 1.38629 1.38629 1.38629
3772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3773 12 2.81865 0.23582 2.88868 2.35662 12 - -
3774 1.38629 1.38629 1.38629 1.38629
3775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3776 13 2.57915 2.25909 2.64442 0.28946 13 - -
3777 1.38629 1.38629 1.38629 1.38629
3778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3779 14 2.57915 2.25909 2.64442 0.28946 14 - -
3780 1.38629 1.38629 1.38629 1.38629
3781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3782 15 2.81865 0.23582 2.88868 2.35662 15 - -
3783 1.38629 1.38629 1.38629 1.38629
3784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3785 16 2.81865 0.23582 2.88868 2.35662 16 - -
3786 1.38629 1.38629 1.38629 1.38629
3787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3788 17 2.53331 3.02441 0.20344 2.88069 17 - -
3789 1.38629 1.38629 1.38629 1.38629
3790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3791 18 2.53331 3.02441 0.20344 2.88069 18 - -
3792 1.38629 1.38629 1.38629 1.38629
3793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3794 19 2.53331 3.02441 0.20344 2.88069 19 - -
3795 1.38629 1.38629 1.38629 1.38629
3796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3797 20 2.57915 2.25909 2.64442 0.28946 20 - -
3798 1.38629 1.38629 1.38629 1.38629
3799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3800 21 2.57915 2.25909 2.64442 0.28946 21 - -
3801 1.38629 1.38629 1.38629 1.38629
3802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3803 22 2.53331 3.02441 0.20344 2.88069 22 - -
3804 1.38629 1.38629 1.38629 1.38629
3805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3806 23 2.81865 0.23582 2.88868 2.35662 23 - -
3807 1.38629 1.38629 1.38629 1.38629
3808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3809 24 0.23862 2.84929 2.43386 2.70756 24 - -
3810 1.38629 1.38629 1.38629 1.38629
3811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3812 25 0.23862 2.84929 2.43386 2.70756 25 - -
3813 1.38629 1.38629 1.38629 1.38629
3814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3815 26 2.53331 3.02441 0.20344 2.88069 26 - -
3816 1.38629 1.38629 1.38629 1.38629
3817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3818 27 2.53331 3.02441 0.20344 2.88069 27 - -
3819 1.38629 1.38629 1.38629 1.38629
3820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3821 28 2.53331 3.02441 0.20344 2.88069 28 - -
3822 1.38629 1.38629 1.38629 1.38629
3823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3824 29 2.53331 3.02441 0.20344 2.88069 29 - -
3825 1.38629 1.38629 1.38629 1.38629
3826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3827 30 2.81865 0.23582 2.88868 2.35662 30 - -
3828 1.38629 1.38629 1.38629 1.38629
3829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3830 31 2.53331 3.02441 0.20344 2.88069 31 - -
3831 1.38629 1.38629 1.38629 1.38629
3832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3833 32 2.81865 0.23582 2.88868 2.35662 32 - -
3834 1.38629 1.38629 1.38629 1.38629
3835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3836 33 2.53331 3.02441 0.20344 2.88069 33 - -
3837 1.38629 1.38629 1.38629 1.38629
3838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3839 34 2.57915 2.25909 2.64442 0.28946 34 - -
3840 1.38629 1.38629 1.38629 1.38629
3841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3842 35 2.81865 0.23582 2.88868 2.35662 35 - -
3843 1.38629 1.38629 1.38629 1.38629
3844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3845 36 2.53331 3.02441 0.20344 2.88069 36 - -
3846 1.38629 1.38629 1.38629 1.38629
3847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3848 37 2.53331 3.02441 0.20344 2.88069 37 - -
3849 1.38629 1.38629 1.38629 1.38629
3850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3851 38 2.81865 0.23582 2.88868 2.35662 38 - -
3852 1.38629 1.38629 1.38629 1.38629
3853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3854 39 0.23862 2.84929 2.43386 2.70756 39 - -
3855 1.38629 1.38629 1.38629 1.38629
3856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3857 40 0.23862 2.84929 2.43386 2.70756 40 - -
3858 1.38629 1.38629 1.38629 1.38629
3859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3860 41 2.81865 0.23582 2.88868 2.35662 41 - -
3861 1.38629 1.38629 1.38629 1.38629
3862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3863 42 0.23862 2.84929 2.43386 2.70756 42 - -
3864 1.38629 1.38629 1.38629 1.38629
3865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3866 43 2.57915 2.25909 2.64442 0.28946 43 - -
3867 1.38629 1.38629 1.38629 1.38629
3868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3869 44 2.81865 0.23582 2.88868 2.35662 44 - -
3870 1.38629 1.38629 1.38629 1.38629
3871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3872 45 2.53331 3.02441 0.20344 2.88069 45 - -
3873 1.38629 1.38629 1.38629 1.38629
3874 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
3875 //
3876 HMMER3/b [3.0 | March 2010]
3877 NAME 3_End_Chlorophyta_58S_end_tena_long
3878 LENG 45
3879 ALPH DNA
3880 RF no
3881 CS no
3882 MAP yes
3883 DATE Sat Jan 28 01:07:19 2012
3884 NSEQ 2
3885 EFFN 2.000000
3886 CKSUM 591123521
3887 STATS LOCAL MSV -7.5741 0.72700
3888 STATS LOCAL VITERBI -8.3318 0.72700
3889 STATS LOCAL FORWARD -3.2610 0.72700
3890 HMM A C G T
3891 m->m m->i m->d i->m i->i d->m d->d
3892 COMPO 1.74607 1.20240 1.07782 1.68885
3893 1.38629 1.38629 1.38629 1.38629
3894 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
3895 1 2.53331 3.02441 0.20344 2.88069 1 - -
3896 1.38629 1.38629 1.38629 1.38629
3897 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3898 2 2.81865 0.23582 2.88868 2.35662 2 - -
3899 1.38629 1.38629 1.38629 1.38629
3900 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3901 3 2.53331 3.02441 0.20344 2.88069 3 - -
3902 1.38629 1.38629 1.38629 1.38629
3903 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3904 4 2.81865 0.23582 2.88868 2.35662 4 - -
3905 1.38629 1.38629 1.38629 1.38629
3906 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3907 5 2.81865 0.23582 2.88868 2.35662 5 - -
3908 1.38629 1.38629 1.38629 1.38629
3909 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3910 6 2.81865 0.23582 2.88868 2.35662 6 - -
3911 1.38629 1.38629 1.38629 1.38629
3912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3913 7 2.53331 3.02441 0.20344 2.88069 7 - -
3914 1.38629 1.38629 1.38629 1.38629
3915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3916 8 0.23862 2.84929 2.43386 2.70756 8 - -
3917 1.38629 1.38629 1.38629 1.38629
3918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3919 9 2.53331 3.02441 0.20344 2.88069 9 - -
3920 1.38629 1.38629 1.38629 1.38629
3921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3922 10 2.53331 3.02441 0.20344 2.88069 10 - -
3923 1.38629 1.38629 1.38629 1.38629
3924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3925 11 2.81865 0.23582 2.88868 2.35662 11 - -
3926 1.38629 1.38629 1.38629 1.38629
3927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3928 12 2.57915 2.25909 2.64442 0.28946 12 - -
3929 1.38629 1.38629 1.38629 1.38629
3930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3931 13 2.57915 2.25909 2.64442 0.28946 13 - -
3932 1.38629 1.38629 1.38629 1.38629
3933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3934 14 2.81865 0.23582 2.88868 2.35662 14 - -
3935 1.38629 1.38629 1.38629 1.38629
3936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3937 15 2.53331 3.02441 0.20344 2.88069 15 - -
3938 1.38629 1.38629 1.38629 1.38629
3939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3940 16 2.53331 3.02441 0.20344 2.88069 16 - -
3941 1.38629 1.38629 1.38629 1.38629
3942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3943 17 2.81865 0.23582 2.88868 2.35662 17 - -
3944 1.38629 1.38629 1.38629 1.38629
3945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3946 18 2.81865 0.23582 2.88868 2.35662 18 - -
3947 1.38629 1.38629 1.38629 1.38629
3948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3949 19 2.53331 3.02441 0.20344 2.88069 19 - -
3950 1.38629 1.38629 1.38629 1.38629
3951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3952 20 0.23862 2.84929 2.43386 2.70756 20 - -
3953 1.38629 1.38629 1.38629 1.38629
3954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3955 21 2.53331 3.02441 0.20344 2.88069 21 - -
3956 1.38629 1.38629 1.38629 1.38629
3957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3958 22 2.53331 3.02441 0.20344 2.88069 22 - -
3959 1.38629 1.38629 1.38629 1.38629
3960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3961 23 2.53331 3.02441 0.20344 2.88069 23 - -
3962 1.38629 1.38629 1.38629 1.38629
3963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3964 24 2.81865 0.23582 2.88868 2.35662 24 - -
3965 1.38629 1.38629 1.38629 1.38629
3966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3967 25 0.23862 2.84929 2.43386 2.70756 25 - -
3968 1.38629 1.38629 1.38629 1.38629
3969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3970 26 2.57915 2.25909 2.64442 0.28946 26 - -
3971 1.38629 1.38629 1.38629 1.38629
3972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3973 27 0.23862 2.84929 2.43386 2.70756 27 - -
3974 1.38629 1.38629 1.38629 1.38629
3975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3976 28 2.57915 2.25909 2.64442 0.28946 28 - -
3977 1.38629 1.38629 1.38629 1.38629
3978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3979 29 2.81865 0.23582 2.88868 2.35662 29 - -
3980 1.38629 1.38629 1.38629 1.38629
3981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3982 30 2.57915 2.25909 2.64442 0.28946 30 - -
3983 1.38629 1.38629 1.38629 1.38629
3984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3985 31 2.53331 3.02441 0.20344 2.88069 31 - -
3986 1.38629 1.38629 1.38629 1.38629
3987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3988 32 2.81865 0.23582 2.88868 2.35662 32 - -
3989 1.38629 1.38629 1.38629 1.38629
3990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3991 33 2.81865 0.23582 2.88868 2.35662 33 - -
3992 1.38629 1.38629 1.38629 1.38629
3993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3994 34 2.57915 2.25909 2.64442 0.28946 34 - -
3995 1.38629 1.38629 1.38629 1.38629
3996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
3997 35 2.53331 3.02441 0.20344 2.88069 35 - -
3998 1.38629 1.38629 1.38629 1.38629
3999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4000 36 0.23862 2.84929 2.43386 2.70756 36 - -
4001 1.38629 1.38629 1.38629 1.38629
4002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4003 37 2.53331 3.02441 0.20344 2.88069 37 - -
4004 1.38629 1.38629 1.38629 1.38629
4005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4006 38 2.81865 0.23582 2.88868 2.35662 38 - -
4007 1.38629 1.38629 1.38629 1.38629
4008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4009 39 2.53331 3.02441 0.20344 2.88069 39 - -
4010 1.38629 1.38629 1.38629 1.38629
4011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4012 40 2.57915 2.25909 2.64442 0.28946 40 - -
4013 1.38629 1.38629 1.38629 1.38629
4014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4015 41 2.81865 0.23582 2.88868 2.35662 41 - -
4016 1.38629 1.38629 1.38629 1.38629
4017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4018 42 0.23862 2.84929 2.43386 2.70756 42 - -
4019 1.38629 1.38629 1.38629 1.38629
4020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4021 43 2.53331 3.02441 0.20344 2.88069 43 - -
4022 1.38629 1.38629 1.38629 1.38629
4023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4024 44 2.81865 0.23582 2.88868 2.35662 44 - -
4025 1.38629 1.38629 1.38629 1.38629
4026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4027 45 2.53331 3.02441 0.20344 2.88069 45 - -
4028 1.38629 1.38629 1.38629 1.38629
4029 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
4030 //
4031 HMMER3/b [3.0 | March 2010]
4032 NAME 3_End_Chlorophyta_58S_end_tenb_long
4033 LENG 45
4034 ALPH DNA
4035 RF no
4036 CS no
4037 MAP yes
4038 DATE Sat Jan 28 01:07:25 2012
4039 NSEQ 5
4040 EFFN 3.247070
4041 CKSUM 2521986931
4042 STATS LOCAL MSV -8.1587 0.71933
4043 STATS LOCAL VITERBI -7.8377 0.71933
4044 STATS LOCAL FORWARD -3.8876 0.71933
4045 HMM A C G T
4046 m->m m->i m->d i->m i->i d->m d->d
4047 COMPO 1.67141 1.26560 1.12663 1.58072
4048 1.38629 1.38629 1.38629 1.38629
4049 0.03741 3.99766 3.99766 1.46634 0.26236 0.00000 *
4050 1 2.93035 3.56282 0.11992 3.46492 1 - -
4051 1.38629 1.38629 1.38629 1.38629
4052 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4053 2 3.40484 0.13363 3.45549 2.80837 2 - -
4054 1.38629 1.38629 1.38629 1.38629
4055 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4056 3 0.14518 3.35575 2.78597 3.25510 3 - -
4057 1.38629 1.38629 1.38629 1.38629
4058 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4059 4 3.40484 0.13363 3.45549 2.80837 4 - -
4060 1.38629 1.38629 1.38629 1.38629
4061 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4062 5 3.06393 2.57943 3.11303 0.18271 5 - -
4063 1.38629 1.38629 1.38629 1.38629
4064 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4065 6 3.40484 0.13363 3.45549 2.80837 6 - -
4066 1.38629 1.38629 1.38629 1.38629
4067 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4068 7 2.93035 3.56282 0.11992 3.46492 7 - -
4069 1.38629 1.38629 1.38629 1.38629
4070 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4071 8 0.14518 3.35575 2.78597 3.25510 8 - -
4072 1.38629 1.38629 1.38629 1.38629
4073 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4074 9 2.93035 3.56282 0.11992 3.46492 9 - -
4075 1.38629 1.38629 1.38629 1.38629
4076 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4077 10 2.93035 3.56282 0.11992 3.46492 10 - -
4078 1.38629 1.38629 1.38629 1.38629
4079 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4080 11 3.40484 0.13363 3.45549 2.80837 11 - -
4081 1.38629 1.38629 1.38629 1.38629
4082 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4083 12 3.06393 2.57943 3.11303 0.18271 12 - -
4084 1.38629 1.38629 1.38629 1.38629
4085 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4086 13 3.06393 2.57943 3.11303 0.18271 13 - -
4087 1.38629 1.38629 1.38629 1.38629
4088 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4089 14 3.40484 0.13363 3.45549 2.80837 14 - -
4090 1.38629 1.38629 1.38629 1.38629
4091 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4092 15 2.93035 3.56282 0.11992 3.46492 15 - -
4093 1.38629 1.38629 1.38629 1.38629
4094 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4095 16 2.93035 3.56282 0.11992 3.46492 16 - -
4096 1.38629 1.38629 1.38629 1.38629
4097 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4098 17 3.40484 0.13363 3.45549 2.80837 17 - -
4099 1.38629 1.38629 1.38629 1.38629
4100 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4101 18 3.40484 0.13363 3.45549 2.80837 18 - -
4102 1.38629 1.38629 1.38629 1.38629
4103 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4104 19 0.64364 2.54320 1.18656 2.39976 19 - -
4105 1.38629 1.38629 1.38629 1.38629
4106 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4107 20 0.14518 3.35575 2.78597 3.25510 20 - -
4108 1.38629 1.38629 1.38629 1.38629
4109 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4110 21 2.93035 3.56282 0.11992 3.46492 21 - -
4111 1.38629 1.38629 1.38629 1.38629
4112 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4113 22 0.14518 3.35575 2.78597 3.25510 22 - -
4114 1.38629 1.38629 1.38629 1.38629
4115 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4116 23 2.93035 3.56282 0.11992 3.46492 23 - -
4117 1.38629 1.38629 1.38629 1.38629
4118 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4119 24 3.06393 2.57943 3.11303 0.18271 24 - -
4120 1.38629 1.38629 1.38629 1.38629
4121 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4122 25 0.14518 3.35575 2.78597 3.25510 25 - -
4123 1.38629 1.38629 1.38629 1.38629
4124 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4125 26 3.06393 2.57943 3.11303 0.18271 26 - -
4126 1.38629 1.38629 1.38629 1.38629
4127 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4128 27 2.93035 3.56282 0.11992 3.46492 27 - -
4129 1.38629 1.38629 1.38629 1.38629
4130 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4131 28 3.40484 0.13363 3.45549 2.80837 28 - -
4132 1.38629 1.38629 1.38629 1.38629
4133 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4134 29 3.40484 0.13363 3.45549 2.80837 29 - -
4135 1.38629 1.38629 1.38629 1.38629
4136 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4137 30 3.06393 2.57943 3.11303 0.18271 30 - -
4138 1.38629 1.38629 1.38629 1.38629
4139 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4140 31 2.93035 3.56282 0.11992 3.46492 31 - -
4141 1.38629 1.38629 1.38629 1.38629
4142 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4143 32 3.40484 0.13363 3.45549 2.80837 32 - -
4144 1.38629 1.38629 1.38629 1.38629
4145 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4146 33 3.40484 0.13363 3.45549 2.80837 33 - -
4147 1.38629 1.38629 1.38629 1.38629
4148 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4149 34 3.06393 2.57943 3.11303 0.18271 34 - -
4150 1.38629 1.38629 1.38629 1.38629
4151 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4152 35 2.93035 3.56282 0.11992 3.46492 35 - -
4153 1.38629 1.38629 1.38629 1.38629
4154 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4155 36 0.14518 3.35575 2.78597 3.25510 36 - -
4156 1.38629 1.38629 1.38629 1.38629
4157 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4158 37 2.93035 3.56282 0.11992 3.46492 37 - -
4159 1.38629 1.38629 1.38629 1.38629
4160 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4161 38 3.40484 0.13363 3.45549 2.80837 38 - -
4162 1.38629 1.38629 1.38629 1.38629
4163 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4164 39 2.93035 3.56282 0.11992 3.46492 39 - -
4165 1.38629 1.38629 1.38629 1.38629
4166 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4167 40 3.06393 2.57943 3.11303 0.18271 40 - -
4168 1.38629 1.38629 1.38629 1.38629
4169 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4170 41 3.40484 0.13363 3.45549 2.80837 41 - -
4171 1.38629 1.38629 1.38629 1.38629
4172 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4173 42 0.14518 3.35575 2.78597 3.25510 42 - -
4174 1.38629 1.38629 1.38629 1.38629
4175 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4176 43 2.93035 3.56282 0.11992 3.46492 43 - -
4177 1.38629 1.38629 1.38629 1.38629
4178 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4179 44 3.06393 2.57943 3.11303 0.18271 44 - -
4180 1.38629 1.38629 1.38629 1.38629
4181 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
4182 45 2.93035 3.56282 0.11992 3.46492 45 - -
4183 1.38629 1.38629 1.38629 1.38629
4184 0.01888 3.97913 * 1.46634 0.26236 0.00000 *
4185 //
4186 HMMER3/b [3.0 | March 2010]
4187 NAME 3_End_Chlorophyta_58S_end_tenc_long
4188 LENG 45
4189 ALPH DNA
4190 RF no
4191 CS no
4192 MAP yes
4193 DATE Sat Jan 28 01:07:32 2012
4194 NSEQ 2
4195 EFFN 2.000000
4196 CKSUM 3208501958
4197 STATS LOCAL MSV -7.5772 0.72723
4198 STATS LOCAL VITERBI -8.1443 0.72723
4199 STATS LOCAL FORWARD -3.3746 0.72723
4200 HMM A C G T
4201 m->m m->i m->d i->m i->i d->m d->d
4202 COMPO 1.74235 1.29869 1.07600 1.55568
4203 1.38629 1.38629 1.38629 1.38629
4204 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
4205 1 2.53331 3.02441 0.20344 2.88069 1 - -
4206 1.38629 1.38629 1.38629 1.38629
4207 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4208 2 2.81865 0.23582 2.88868 2.35662 2 - -
4209 1.38629 1.38629 1.38629 1.38629
4210 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4211 3 2.53331 3.02441 0.20344 2.88069 3 - -
4212 1.38629 1.38629 1.38629 1.38629
4213 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4214 4 2.81865 0.23582 2.88868 2.35662 4 - -
4215 1.38629 1.38629 1.38629 1.38629
4216 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4217 5 2.57915 2.25909 2.64442 0.28946 5 - -
4218 1.38629 1.38629 1.38629 1.38629
4219 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4220 6 2.81865 0.23582 2.88868 2.35662 6 - -
4221 1.38629 1.38629 1.38629 1.38629
4222 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4223 7 2.53331 3.02441 0.20344 2.88069 7 - -
4224 1.38629 1.38629 1.38629 1.38629
4225 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4226 8 0.23862 2.84929 2.43386 2.70756 8 - -
4227 1.38629 1.38629 1.38629 1.38629
4228 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4229 9 2.53331 3.02441 0.20344 2.88069 9 - -
4230 1.38629 1.38629 1.38629 1.38629
4231 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4232 10 2.53331 3.02441 0.20344 2.88069 10 - -
4233 1.38629 1.38629 1.38629 1.38629
4234 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4235 11 2.81865 0.23582 2.88868 2.35662 11 - -
4236 1.38629 1.38629 1.38629 1.38629
4237 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4238 12 2.57915 2.25909 2.64442 0.28946 12 - -
4239 1.38629 1.38629 1.38629 1.38629
4240 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4241 13 2.57915 2.25909 2.64442 0.28946 13 - -
4242 1.38629 1.38629 1.38629 1.38629
4243 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4244 14 2.81865 0.23582 2.88868 2.35662 14 - -
4245 1.38629 1.38629 1.38629 1.38629
4246 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4247 15 2.53331 3.02441 0.20344 2.88069 15 - -
4248 1.38629 1.38629 1.38629 1.38629
4249 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4250 16 2.53331 3.02441 0.20344 2.88069 16 - -
4251 1.38629 1.38629 1.38629 1.38629
4252 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4253 17 2.81865 0.23582 2.88868 2.35662 17 - -
4254 1.38629 1.38629 1.38629 1.38629
4255 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4256 18 2.81865 0.23582 2.88868 2.35662 18 - -
4257 1.38629 1.38629 1.38629 1.38629
4258 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4259 19 2.53331 3.02441 0.20344 2.88069 19 - -
4260 1.38629 1.38629 1.38629 1.38629
4261 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4262 20 0.23862 2.84929 2.43386 2.70756 20 - -
4263 1.38629 1.38629 1.38629 1.38629
4264 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4265 21 2.53331 3.02441 0.20344 2.88069 21 - -
4266 1.38629 1.38629 1.38629 1.38629
4267 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4268 22 0.23862 2.84929 2.43386 2.70756 22 - -
4269 1.38629 1.38629 1.38629 1.38629
4270 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4271 23 2.53331 3.02441 0.20344 2.88069 23 - -
4272 1.38629 1.38629 1.38629 1.38629
4273 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4274 24 2.81865 0.23582 2.88868 2.35662 24 - -
4275 1.38629 1.38629 1.38629 1.38629
4276 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4277 25 0.23862 2.84929 2.43386 2.70756 25 - -
4278 1.38629 1.38629 1.38629 1.38629
4279 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4280 26 2.57915 2.25909 2.64442 0.28946 26 - -
4281 1.38629 1.38629 1.38629 1.38629
4282 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4283 27 2.53331 3.02441 0.20344 2.88069 27 - -
4284 1.38629 1.38629 1.38629 1.38629
4285 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4286 28 2.57915 2.25909 2.64442 0.28946 28 - -
4287 1.38629 1.38629 1.38629 1.38629
4288 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4289 29 2.81865 0.23582 2.88868 2.35662 29 - -
4290 1.38629 1.38629 1.38629 1.38629
4291 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4292 30 2.57915 2.25909 2.64442 0.28946 30 - -
4293 1.38629 1.38629 1.38629 1.38629
4294 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4295 31 2.53331 3.02441 0.20344 2.88069 31 - -
4296 1.38629 1.38629 1.38629 1.38629
4297 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4298 32 2.81865 0.23582 2.88868 2.35662 32 - -
4299 1.38629 1.38629 1.38629 1.38629
4300 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4301 33 2.81865 0.23582 2.88868 2.35662 33 - -
4302 1.38629 1.38629 1.38629 1.38629
4303 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4304 34 2.57915 2.25909 2.64442 0.28946 34 - -
4305 1.38629 1.38629 1.38629 1.38629
4306 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4307 35 2.53331 3.02441 0.20344 2.88069 35 - -
4308 1.38629 1.38629 1.38629 1.38629
4309 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4310 36 0.23862 2.84929 2.43386 2.70756 36 - -
4311 1.38629 1.38629 1.38629 1.38629
4312 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4313 37 2.53331 3.02441 0.20344 2.88069 37 - -
4314 1.38629 1.38629 1.38629 1.38629
4315 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4316 38 2.57915 2.25909 2.64442 0.28946 38 - -
4317 1.38629 1.38629 1.38629 1.38629
4318 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4319 39 2.53331 3.02441 0.20344 2.88069 39 - -
4320 1.38629 1.38629 1.38629 1.38629
4321 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4322 40 2.57915 2.25909 2.64442 0.28946 40 - -
4323 1.38629 1.38629 1.38629 1.38629
4324 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4325 41 2.81865 0.23582 2.88868 2.35662 41 - -
4326 1.38629 1.38629 1.38629 1.38629
4327 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4328 42 0.23862 2.84929 2.43386 2.70756 42 - -
4329 1.38629 1.38629 1.38629 1.38629
4330 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4331 43 2.53331 3.02441 0.20344 2.88069 43 - -
4332 1.38629 1.38629 1.38629 1.38629
4333 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4334 44 2.81865 0.23582 2.88868 2.35662 44 - -
4335 1.38629 1.38629 1.38629 1.38629
4336 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4337 45 2.53331 3.02441 0.20344 2.88069 45 - -
4338 1.38629 1.38629 1.38629 1.38629
4339 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
4340 //
4341 HMMER3/b [3.0 | March 2010]
4342 NAME 3_End_Chlorophyta_58S_end_thirteen_long
4343 LENG 45
4344 ALPH DNA
4345 RF no
4346 CS no
4347 MAP yes
4348 DATE Sat Jan 28 01:08:41 2012
4349 NSEQ 2
4350 EFFN 2.000000
4351 CKSUM 1843024009
4352 STATS LOCAL MSV -7.3966 0.72771
4353 STATS LOCAL VITERBI -8.2127 0.72771
4354 STATS LOCAL FORWARD -3.4704 0.72771
4355 HMM A C G T
4356 m->m m->i m->d i->m i->i d->m d->d
4357 COMPO 1.82835 1.28871 1.17034 1.37265
4358 1.38629 1.38629 1.38629 1.38629
4359 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
4360 1 2.57915 2.25909 2.64442 0.28946 1 - -
4361 1.38629 1.38629 1.38629 1.38629
4362 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4363 2 2.57915 2.25909 2.64442 0.28946 2 - -
4364 1.38629 1.38629 1.38629 1.38629
4365 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4366 3 2.53331 3.02441 0.20344 2.88069 3 - -
4367 1.38629 1.38629 1.38629 1.38629
4368 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4369 4 2.81865 0.23582 2.88868 2.35662 4 - -
4370 1.38629 1.38629 1.38629 1.38629
4371 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4372 5 2.53331 3.02441 0.20344 2.88069 5 - -
4373 1.38629 1.38629 1.38629 1.38629
4374 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4375 6 2.53331 3.02441 0.20344 2.88069 6 - -
4376 1.38629 1.38629 1.38629 1.38629
4377 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4378 7 2.57915 2.25909 2.64442 0.28946 7 - -
4379 1.38629 1.38629 1.38629 1.38629
4380 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4381 8 2.53331 3.02441 0.20344 2.88069 8 - -
4382 1.38629 1.38629 1.38629 1.38629
4383 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4384 9 2.53331 3.02441 0.20344 2.88069 9 - -
4385 1.38629 1.38629 1.38629 1.38629
4386 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4387 10 2.57915 2.25909 2.64442 0.28946 10 - -
4388 1.38629 1.38629 1.38629 1.38629
4389 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4390 11 2.53331 3.02441 0.20344 2.88069 11 - -
4391 1.38629 1.38629 1.38629 1.38629
4392 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4393 12 2.81865 0.23582 2.88868 2.35662 12 - -
4394 1.38629 1.38629 1.38629 1.38629
4395 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4396 13 2.81865 0.23582 2.88868 2.35662 13 - -
4397 1.38629 1.38629 1.38629 1.38629
4398 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4399 14 2.57915 2.25909 2.64442 0.28946 14 - -
4400 1.38629 1.38629 1.38629 1.38629
4401 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4402 15 2.81865 0.23582 2.88868 2.35662 15 - -
4403 1.38629 1.38629 1.38629 1.38629
4404 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4405 16 2.53331 3.02441 0.20344 2.88069 16 - -
4406 1.38629 1.38629 1.38629 1.38629
4407 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4408 17 2.53331 3.02441 0.20344 2.88069 17 - -
4409 1.38629 1.38629 1.38629 1.38629
4410 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4411 18 2.57915 2.25909 2.64442 0.28946 18 - -
4412 1.38629 1.38629 1.38629 1.38629
4413 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4414 19 0.23862 2.84929 2.43386 2.70756 19 - -
4415 1.38629 1.38629 1.38629 1.38629
4416 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4417 20 2.57915 2.25909 2.64442 0.28946 20 - -
4418 1.38629 1.38629 1.38629 1.38629
4419 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4420 21 2.81865 0.23582 2.88868 2.35662 21 - -
4421 1.38629 1.38629 1.38629 1.38629
4422 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4423 22 0.23862 2.84929 2.43386 2.70756 22 - -
4424 1.38629 1.38629 1.38629 1.38629
4425 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4426 23 2.81865 0.23582 2.88868 2.35662 23 - -
4427 1.38629 1.38629 1.38629 1.38629
4428 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4429 24 2.81865 0.23582 2.88868 2.35662 24 - -
4430 1.38629 1.38629 1.38629 1.38629
4431 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4432 25 0.23862 2.84929 2.43386 2.70756 25 - -
4433 1.38629 1.38629 1.38629 1.38629
4434 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4435 26 2.57915 2.25909 2.64442 0.28946 26 - -
4436 1.38629 1.38629 1.38629 1.38629
4437 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4438 27 2.53331 3.02441 0.20344 2.88069 27 - -
4439 1.38629 1.38629 1.38629 1.38629
4440 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4441 28 2.57915 2.25909 2.64442 0.28946 28 - -
4442 1.38629 1.38629 1.38629 1.38629
4443 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4444 29 2.81865 0.23582 2.88868 2.35662 29 - -
4445 1.38629 1.38629 1.38629 1.38629
4446 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4447 30 2.57915 2.25909 2.64442 0.28946 30 - -
4448 1.38629 1.38629 1.38629 1.38629
4449 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4450 31 2.53331 3.02441 0.20344 2.88069 31 - -
4451 1.38629 1.38629 1.38629 1.38629
4452 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4453 32 2.81865 0.23582 2.88868 2.35662 32 - -
4454 1.38629 1.38629 1.38629 1.38629
4455 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4456 33 2.81865 0.23582 2.88868 2.35662 33 - -
4457 1.38629 1.38629 1.38629 1.38629
4458 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4459 34 2.57915 2.25909 2.64442 0.28946 34 - -
4460 1.38629 1.38629 1.38629 1.38629
4461 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4462 35 2.81865 0.23582 2.88868 2.35662 35 - -
4463 1.38629 1.38629 1.38629 1.38629
4464 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4465 36 0.23862 2.84929 2.43386 2.70756 36 - -
4466 1.38629 1.38629 1.38629 1.38629
4467 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4468 37 2.53331 3.02441 0.20344 2.88069 37 - -
4469 1.38629 1.38629 1.38629 1.38629
4470 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4471 38 2.81865 0.23582 2.88868 2.35662 38 - -
4472 1.38629 1.38629 1.38629 1.38629
4473 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4474 39 2.53331 3.02441 0.20344 2.88069 39 - -
4475 1.38629 1.38629 1.38629 1.38629
4476 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4477 40 2.57915 2.25909 2.64442 0.28946 40 - -
4478 1.38629 1.38629 1.38629 1.38629
4479 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4480 41 2.81865 0.23582 2.88868 2.35662 41 - -
4481 1.38629 1.38629 1.38629 1.38629
4482 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4483 42 2.53331 3.02441 0.20344 2.88069 42 - -
4484 1.38629 1.38629 1.38629 1.38629
4485 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4486 43 2.53331 3.02441 0.20344 2.88069 43 - -
4487 1.38629 1.38629 1.38629 1.38629
4488 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4489 44 0.23862 2.84929 2.43386 2.70756 44 - -
4490 1.38629 1.38629 1.38629 1.38629
4491 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4492 45 2.53331 3.02441 0.20344 2.88069 45 - -
4493 1.38629 1.38629 1.38629 1.38629
4494 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
4495 //
4496 HMMER3/b [3.0 | March 2010]
4497 NAME 3_End_Chlorophyta_58S_end_three_long
4498 LENG 45
4499 ALPH DNA
4500 RF no
4501 CS no
4502 MAP yes
4503 DATE Sat Jan 28 01:05:03 2012
4504 NSEQ 36
4505 EFFN 3.177246
4506 CKSUM 3671677378
4507 STATS LOCAL MSV -8.0233 0.71932
4508 STATS LOCAL VITERBI -7.5418 0.71932
4509 STATS LOCAL FORWARD -3.8393 0.71932
4510 HMM A C G T
4511 m->m m->i m->d i->m i->i d->m d->d
4512 COMPO 1.73557 1.15352 1.14079 1.66808
4513 1.38629 1.38629 1.38629 1.38629
4514 0.03790 3.98476 3.98476 1.46634 0.26236 0.00000 *
4515 1 2.91395 3.53912 0.12262 3.43880 1 - -
4516 1.38629 1.38629 1.38629 1.38629
4517 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4518 2 3.37805 0.13697 3.42981 2.78874 2 - -
4519 1.38629 1.38629 1.38629 1.38629
4520 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4521 3 2.91395 3.53912 0.12262 3.43880 3 - -
4522 1.38629 1.38629 1.38629 1.38629
4523 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4524 4 3.37805 0.13697 3.42981 2.78874 4 - -
4525 1.38629 1.38629 1.38629 1.38629
4526 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4527 5 3.04070 2.56462 3.09068 0.18660 5 - -
4528 1.38629 1.38629 1.38629 1.38629
4529 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4530 6 3.37805 0.13697 3.42981 2.78874 6 - -
4531 1.38629 1.38629 1.38629 1.38629
4532 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4533 7 2.91395 3.53912 0.12262 3.43880 7 - -
4534 1.38629 1.38629 1.38629 1.38629
4535 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4536 8 0.14836 3.33255 2.77082 3.22974 8 - -
4537 1.38629 1.38629 1.38629 1.38629
4538 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4539 9 2.91395 3.53912 0.12262 3.43880 9 - -
4540 1.38629 1.38629 1.38629 1.38629
4541 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4542 10 2.91395 3.53912 0.12262 3.43880 10 - -
4543 1.38629 1.38629 1.38629 1.38629
4544 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4545 11 3.37805 0.13697 3.42981 2.78874 11 - -
4546 1.38629 1.38629 1.38629 1.38629
4547 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4548 12 3.04070 2.56462 3.09068 0.18660 12 - -
4549 1.38629 1.38629 1.38629 1.38629
4550 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4551 13 2.83286 2.10204 2.89003 0.27001 13 - -
4552 1.38629 1.38629 1.38629 1.38629
4553 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4554 14 3.37805 0.13697 3.42981 2.78874 14 - -
4555 1.38629 1.38629 1.38629 1.38629
4556 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4557 15 2.91395 3.53912 0.12262 3.43880 15 - -
4558 1.38629 1.38629 1.38629 1.38629
4559 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4560 16 2.91395 3.53912 0.12262 3.43880 16 - -
4561 1.38629 1.38629 1.38629 1.38629
4562 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4563 17 3.37805 0.13697 3.42981 2.78874 17 - -
4564 1.38629 1.38629 1.38629 1.38629
4565 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4566 18 3.37805 0.13697 3.42981 2.78874 18 - -
4567 1.38629 1.38629 1.38629 1.38629
4568 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4569 19 0.24927 3.01762 2.14913 2.89812 19 - -
4570 1.38629 1.38629 1.38629 1.38629
4571 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4572 20 0.14836 3.33255 2.77082 3.22974 20 - -
4573 1.38629 1.38629 1.38629 1.38629
4574 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4575 21 2.91395 3.53912 0.12262 3.43880 21 - -
4576 1.38629 1.38629 1.38629 1.38629
4577 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4578 22 0.14836 3.33255 2.77082 3.22974 22 - -
4579 1.38629 1.38629 1.38629 1.38629
4580 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4581 23 2.91395 3.53912 0.12262 3.43880 23 - -
4582 1.38629 1.38629 1.38629 1.38629
4583 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4584 24 3.37805 0.13697 3.42981 2.78874 24 - -
4585 1.38629 1.38629 1.38629 1.38629
4586 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4587 25 0.14836 3.33255 2.77082 3.22974 25 - -
4588 1.38629 1.38629 1.38629 1.38629
4589 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4590 26 3.04070 2.56462 3.09068 0.18660 26 - -
4591 1.38629 1.38629 1.38629 1.38629
4592 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4593 27 2.91395 3.53912 0.12262 3.43880 27 - -
4594 1.38629 1.38629 1.38629 1.38629
4595 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4596 28 3.04070 2.56462 3.09068 0.18660 28 - -
4597 1.38629 1.38629 1.38629 1.38629
4598 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4599 29 3.37805 0.13697 3.42981 2.78874 29 - -
4600 1.38629 1.38629 1.38629 1.38629
4601 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4602 30 3.04070 2.56462 3.09068 0.18660 30 - -
4603 1.38629 1.38629 1.38629 1.38629
4604 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4605 31 2.91395 3.53912 0.12262 3.43880 31 - -
4606 1.38629 1.38629 1.38629 1.38629
4607 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4608 32 3.37805 0.13697 3.42981 2.78874 32 - -
4609 1.38629 1.38629 1.38629 1.38629
4610 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4611 33 3.37805 0.13697 3.42981 2.78874 33 - -
4612 1.38629 1.38629 1.38629 1.38629
4613 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4614 34 3.04070 2.56462 3.09068 0.18660 34 - -
4615 1.38629 1.38629 1.38629 1.38629
4616 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4617 35 3.37805 0.13697 3.42981 2.78874 35 - -
4618 1.38629 1.38629 1.38629 1.38629
4619 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4620 36 0.14836 3.33255 2.77082 3.22974 36 - -
4621 1.38629 1.38629 1.38629 1.38629
4622 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4623 37 2.91395 3.53912 0.12262 3.43880 37 - -
4624 1.38629 1.38629 1.38629 1.38629
4625 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4626 38 3.37805 0.13697 3.42981 2.78874 38 - -
4627 1.38629 1.38629 1.38629 1.38629
4628 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4629 39 2.91395 3.53912 0.12262 3.43880 39 - -
4630 1.38629 1.38629 1.38629 1.38629
4631 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4632 40 3.04070 2.56462 3.09068 0.18660 40 - -
4633 1.38629 1.38629 1.38629 1.38629
4634 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4635 41 3.37805 0.13697 3.42981 2.78874 41 - -
4636 1.38629 1.38629 1.38629 1.38629
4637 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4638 42 2.91395 3.53912 0.12262 3.43880 42 - -
4639 1.38629 1.38629 1.38629 1.38629
4640 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4641 43 2.91395 3.53912 0.12262 3.43880 43 - -
4642 1.38629 1.38629 1.38629 1.38629
4643 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4644 44 3.37805 0.13697 3.42981 2.78874 44 - -
4645 1.38629 1.38629 1.38629 1.38629
4646 0.03790 3.98476 3.98476 1.46634 0.26236 1.09861 0.40547
4647 45 0.14836 3.33255 2.77082 3.22974 45 - -
4648 1.38629 1.38629 1.38629 1.38629
4649 0.01913 3.96599 * 1.46634 0.26236 0.00000 *
4650 //
4651 HMMER3/b [3.0 | March 2010]
4652 NAME 3_End_Chlorophyta_58S_end_twelve_long
4653 LENG 45
4654 ALPH DNA
4655 RF no
4656 CS no
4657 MAP yes
4658 DATE Sat Jan 28 01:08:30 2012
4659 NSEQ 4
4660 EFFN 3.300781
4661 CKSUM 2752840731
4662 STATS LOCAL MSV -8.1722 0.71931
4663 STATS LOCAL VITERBI -7.4014 0.71931
4664 STATS LOCAL FORWARD -3.9277 0.71931
4665 HMM A C G T
4666 m->m m->i m->d i->m i->i d->m d->d
4667 COMPO 1.77926 1.32153 1.11938 1.43537
4668 1.38629 1.38629 1.38629 1.38629
4669 0.03704 4.00748 4.00748 1.46634 0.26236 0.00000 *
4670 1 2.94261 3.58061 0.11794 3.48454 1 - -
4671 1.38629 1.38629 1.38629 1.38629
4672 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4673 2 3.42500 0.13118 3.47480 2.82309 2 - -
4674 1.38629 1.38629 1.38629 1.38629
4675 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4676 3 2.94261 3.58061 0.11794 3.48454 3 - -
4677 1.38629 1.38629 1.38629 1.38629
4678 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4679 4 3.42500 0.13118 3.47480 2.82309 4 - -
4680 1.38629 1.38629 1.38629 1.38629
4681 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4682 5 3.42500 0.13118 3.47480 2.82309 5 - -
4683 1.38629 1.38629 1.38629 1.38629
4684 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4685 6 3.08151 2.59063 3.12994 0.17982 6 - -
4686 1.38629 1.38629 1.38629 1.38629
4687 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4688 7 2.94261 3.58061 0.11794 3.48454 7 - -
4689 1.38629 1.38629 1.38629 1.38629
4690 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4691 8 0.14283 3.37323 2.79735 3.27422 8 - -
4692 1.38629 1.38629 1.38629 1.38629
4693 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4694 9 2.94261 3.58061 0.11794 3.48454 9 - -
4695 1.38629 1.38629 1.38629 1.38629
4696 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4697 10 2.94261 3.58061 0.11794 3.48454 10 - -
4698 1.38629 1.38629 1.38629 1.38629
4699 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4700 11 3.08151 2.59063 3.12994 0.17982 11 - -
4701 1.38629 1.38629 1.38629 1.38629
4702 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4703 12 3.42500 0.13118 3.47480 2.82309 12 - -
4704 1.38629 1.38629 1.38629 1.38629
4705 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4706 13 3.08151 2.59063 3.12994 0.17982 13 - -
4707 1.38629 1.38629 1.38629 1.38629
4708 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4709 14 0.14283 3.37323 2.79735 3.27422 14 - -
4710 1.38629 1.38629 1.38629 1.38629
4711 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4712 15 2.94261 3.58061 0.11794 3.48454 15 - -
4713 1.38629 1.38629 1.38629 1.38629
4714 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4715 16 2.94261 3.58061 0.11794 3.48454 16 - -
4716 1.38629 1.38629 1.38629 1.38629
4717 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4718 17 3.42500 0.13118 3.47480 2.82309 17 - -
4719 1.38629 1.38629 1.38629 1.38629
4720 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4721 18 3.42500 0.13118 3.47480 2.82309 18 - -
4722 1.38629 1.38629 1.38629 1.38629
4723 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4724 19 0.86244 2.51162 0.90909 2.36616 19 - -
4725 1.38629 1.38629 1.38629 1.38629
4726 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4727 20 0.14283 3.37323 2.79735 3.27422 20 - -
4728 1.38629 1.38629 1.38629 1.38629
4729 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4730 21 0.14283 3.37323 2.79735 3.27422 21 - -
4731 1.38629 1.38629 1.38629 1.38629
4732 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4733 22 2.94261 3.58061 0.11794 3.48454 22 - -
4734 1.38629 1.38629 1.38629 1.38629
4735 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4736 23 2.94261 3.58061 0.11794 3.48454 23 - -
4737 1.38629 1.38629 1.38629 1.38629
4738 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4739 24 3.42500 0.13118 3.47480 2.82309 24 - -
4740 1.38629 1.38629 1.38629 1.38629
4741 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4742 25 0.14283 3.37323 2.79735 3.27422 25 - -
4743 1.38629 1.38629 1.38629 1.38629
4744 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4745 26 3.08151 2.59063 3.12994 0.17982 26 - -
4746 1.38629 1.38629 1.38629 1.38629
4747 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4748 27 2.94261 3.58061 0.11794 3.48454 27 - -
4749 1.38629 1.38629 1.38629 1.38629
4750 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4751 28 3.08151 2.59063 3.12994 0.17982 28 - -
4752 1.38629 1.38629 1.38629 1.38629
4753 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4754 29 3.42500 0.13118 3.47480 2.82309 29 - -
4755 1.38629 1.38629 1.38629 1.38629
4756 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4757 30 3.08151 2.59063 3.12994 0.17982 30 - -
4758 1.38629 1.38629 1.38629 1.38629
4759 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4760 31 2.94261 3.58061 0.11794 3.48454 31 - -
4761 1.38629 1.38629 1.38629 1.38629
4762 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4763 32 2.94261 3.58061 0.11794 3.48454 32 - -
4764 1.38629 1.38629 1.38629 1.38629
4765 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4766 33 3.42500 0.13118 3.47480 2.82309 33 - -
4767 1.38629 1.38629 1.38629 1.38629
4768 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4769 34 3.08151 2.59063 3.12994 0.17982 34 - -
4770 1.38629 1.38629 1.38629 1.38629
4771 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4772 35 3.42500 0.13118 3.47480 2.82309 35 - -
4773 1.38629 1.38629 1.38629 1.38629
4774 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4775 36 0.14283 3.37323 2.79735 3.27422 36 - -
4776 1.38629 1.38629 1.38629 1.38629
4777 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4778 37 2.94261 3.58061 0.11794 3.48454 37 - -
4779 1.38629 1.38629 1.38629 1.38629
4780 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4781 38 3.42500 0.13118 3.47480 2.82309 38 - -
4782 1.38629 1.38629 1.38629 1.38629
4783 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4784 39 2.94261 3.58061 0.11794 3.48454 39 - -
4785 1.38629 1.38629 1.38629 1.38629
4786 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4787 40 3.08151 2.59063 3.12994 0.17982 40 - -
4788 1.38629 1.38629 1.38629 1.38629
4789 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4790 41 3.42500 0.13118 3.47480 2.82309 41 - -
4791 1.38629 1.38629 1.38629 1.38629
4792 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4793 42 2.94261 3.58061 0.11794 3.48454 42 - -
4794 1.38629 1.38629 1.38629 1.38629
4795 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4796 43 3.08151 2.59063 3.12994 0.17982 43 - -
4797 1.38629 1.38629 1.38629 1.38629
4798 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4799 44 3.08151 2.59063 3.12994 0.17982 44 - -
4800 1.38629 1.38629 1.38629 1.38629
4801 0.03704 4.00748 4.00748 1.46634 0.26236 1.09861 0.40547
4802 45 3.08151 2.59063 3.12994 0.17982 45 - -
4803 1.38629 1.38629 1.38629 1.38629
4804 0.01869 3.98913 * 1.46634 0.26236 0.00000 *
4805 //
4806 HMMER3/b [3.0 | March 2010]
4807 NAME 3_End_Chlorophyta_58S_end_twoa_long
4808 LENG 45
4809 ALPH DNA
4810 RF no
4811 CS no
4812 MAP yes
4813 DATE Sat Jan 28 01:04:32 2012
4814 NSEQ 2
4815 EFFN 2.000000
4816 CKSUM 2739376932
4817 STATS LOCAL MSV -7.4352 0.72757
4818 STATS LOCAL VITERBI -8.2244 0.72757
4819 STATS LOCAL FORWARD -3.3792 0.72757
4820 HMM A C G T
4821 m->m m->i m->d i->m i->i d->m d->d
4822 COMPO 1.66657 1.24078 1.21694 1.48806
4823 1.38629 1.38629 1.38629 1.38629
4824 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
4825 1 2.53331 3.02441 0.20344 2.88069 1 - -
4826 1.38629 1.38629 1.38629 1.38629
4827 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4828 2 2.81865 0.23582 2.88868 2.35662 2 - -
4829 1.38629 1.38629 1.38629 1.38629
4830 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4831 3 2.53331 3.02441 0.20344 2.88069 3 - -
4832 1.38629 1.38629 1.38629 1.38629
4833 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4834 4 2.81865 0.23582 2.88868 2.35662 4 - -
4835 1.38629 1.38629 1.38629 1.38629
4836 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4837 5 2.81865 0.23582 2.88868 2.35662 5 - -
4838 1.38629 1.38629 1.38629 1.38629
4839 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4840 6 2.81865 0.23582 2.88868 2.35662 6 - -
4841 1.38629 1.38629 1.38629 1.38629
4842 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4843 7 0.23862 2.84929 2.43386 2.70756 7 - -
4844 1.38629 1.38629 1.38629 1.38629
4845 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4846 8 0.23862 2.84929 2.43386 2.70756 8 - -
4847 1.38629 1.38629 1.38629 1.38629
4848 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4849 9 2.53331 3.02441 0.20344 2.88069 9 - -
4850 1.38629 1.38629 1.38629 1.38629
4851 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4852 10 0.23862 2.84929 2.43386 2.70756 10 - -
4853 1.38629 1.38629 1.38629 1.38629
4854 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4855 11 2.81865 0.23582 2.88868 2.35662 11 - -
4856 1.38629 1.38629 1.38629 1.38629
4857 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4858 12 2.57915 2.25909 2.64442 0.28946 12 - -
4859 1.38629 1.38629 1.38629 1.38629
4860 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4861 13 2.57915 2.25909 2.64442 0.28946 13 - -
4862 1.38629 1.38629 1.38629 1.38629
4863 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4864 14 2.81865 0.23582 2.88868 2.35662 14 - -
4865 1.38629 1.38629 1.38629 1.38629
4866 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4867 15 2.53331 3.02441 0.20344 2.88069 15 - -
4868 1.38629 1.38629 1.38629 1.38629
4869 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4870 16 2.53331 3.02441 0.20344 2.88069 16 - -
4871 1.38629 1.38629 1.38629 1.38629
4872 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4873 17 2.57915 2.25909 2.64442 0.28946 17 - -
4874 1.38629 1.38629 1.38629 1.38629
4875 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4876 18 2.81865 0.23582 2.88868 2.35662 18 - -
4877 1.38629 1.38629 1.38629 1.38629
4878 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4879 19 0.23862 2.84929 2.43386 2.70756 19 - -
4880 1.38629 1.38629 1.38629 1.38629
4881 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4882 20 0.23862 2.84929 2.43386 2.70756 20 - -
4883 1.38629 1.38629 1.38629 1.38629
4884 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4885 21 2.53331 3.02441 0.20344 2.88069 21 - -
4886 1.38629 1.38629 1.38629 1.38629
4887 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4888 22 2.53331 3.02441 0.20344 2.88069 22 - -
4889 1.38629 1.38629 1.38629 1.38629
4890 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4891 23 2.53331 3.02441 0.20344 2.88069 23 - -
4892 1.38629 1.38629 1.38629 1.38629
4893 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4894 24 2.81865 0.23582 2.88868 2.35662 24 - -
4895 1.38629 1.38629 1.38629 1.38629
4896 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4897 25 0.23862 2.84929 2.43386 2.70756 25 - -
4898 1.38629 1.38629 1.38629 1.38629
4899 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4900 26 2.57915 2.25909 2.64442 0.28946 26 - -
4901 1.38629 1.38629 1.38629 1.38629
4902 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4903 27 2.53331 3.02441 0.20344 2.88069 27 - -
4904 1.38629 1.38629 1.38629 1.38629
4905 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4906 28 2.57915 2.25909 2.64442 0.28946 28 - -
4907 1.38629 1.38629 1.38629 1.38629
4908 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4909 29 2.81865 0.23582 2.88868 2.35662 29 - -
4910 1.38629 1.38629 1.38629 1.38629
4911 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4912 30 2.57915 2.25909 2.64442 0.28946 30 - -
4913 1.38629 1.38629 1.38629 1.38629
4914 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4915 31 2.53331 3.02441 0.20344 2.88069 31 - -
4916 1.38629 1.38629 1.38629 1.38629
4917 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4918 32 2.81865 0.23582 2.88868 2.35662 32 - -
4919 1.38629 1.38629 1.38629 1.38629
4920 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4921 33 2.81865 0.23582 2.88868 2.35662 33 - -
4922 1.38629 1.38629 1.38629 1.38629
4923 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4924 34 2.57915 2.25909 2.64442 0.28946 34 - -
4925 1.38629 1.38629 1.38629 1.38629
4926 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4927 35 2.81865 0.23582 2.88868 2.35662 35 - -
4928 1.38629 1.38629 1.38629 1.38629
4929 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4930 36 0.23862 2.84929 2.43386 2.70756 36 - -
4931 1.38629 1.38629 1.38629 1.38629
4932 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4933 37 2.53331 3.02441 0.20344 2.88069 37 - -
4934 1.38629 1.38629 1.38629 1.38629
4935 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4936 38 2.81865 0.23582 2.88868 2.35662 38 - -
4937 1.38629 1.38629 1.38629 1.38629
4938 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4939 39 2.53331 3.02441 0.20344 2.88069 39 - -
4940 1.38629 1.38629 1.38629 1.38629
4941 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4942 40 2.57915 2.25909 2.64442 0.28946 40 - -
4943 1.38629 1.38629 1.38629 1.38629
4944 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4945 41 2.81865 0.23582 2.88868 2.35662 41 - -
4946 1.38629 1.38629 1.38629 1.38629
4947 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4948 42 2.53331 3.02441 0.20344 2.88069 42 - -
4949 1.38629 1.38629 1.38629 1.38629
4950 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4951 43 2.53331 3.02441 0.20344 2.88069 43 - -
4952 1.38629 1.38629 1.38629 1.38629
4953 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4954 44 2.57915 2.25909 2.64442 0.28946 44 - -
4955 1.38629 1.38629 1.38629 1.38629
4956 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4957 45 2.57915 2.25909 2.64442 0.28946 45 - -
4958 1.38629 1.38629 1.38629 1.38629
4959 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
4960 //
4961 HMMER3/b [3.0 | March 2010]
4962 NAME 3_End_Chlorophyta_58S_end_twob_long
4963 LENG 45
4964 ALPH DNA
4965 RF no
4966 CS no
4967 MAP yes
4968 DATE Sat Jan 28 01:04:41 2012
4969 NSEQ 2
4970 EFFN 2.000000
4971 CKSUM 1824079490
4972 STATS LOCAL MSV -7.5181 0.72709
4973 STATS LOCAL VITERBI -8.2910 0.72709
4974 STATS LOCAL FORWARD -3.1134 0.72709
4975 HMM A C G T
4976 m->m m->i m->d i->m i->i d->m d->d
4977 COMPO 1.92688 1.15177 1.08069 1.61465
4978 1.38629 1.38629 1.38629 1.38629
4979 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
4980 1 2.53331 3.02441 0.20344 2.88069 1 - -
4981 1.38629 1.38629 1.38629 1.38629
4982 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4983 2 2.81865 0.23582 2.88868 2.35662 2 - -
4984 1.38629 1.38629 1.38629 1.38629
4985 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4986 3 2.53331 3.02441 0.20344 2.88069 3 - -
4987 1.38629 1.38629 1.38629 1.38629
4988 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4989 4 2.81865 0.23582 2.88868 2.35662 4 - -
4990 1.38629 1.38629 1.38629 1.38629
4991 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4992 5 2.81865 0.23582 2.88868 2.35662 5 - -
4993 1.38629 1.38629 1.38629 1.38629
4994 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4995 6 2.81865 0.23582 2.88868 2.35662 6 - -
4996 1.38629 1.38629 1.38629 1.38629
4997 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
4998 7 2.53331 3.02441 0.20344 2.88069 7 - -
4999 1.38629 1.38629 1.38629 1.38629
5000 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5001 8 0.23862 2.84929 2.43386 2.70756 8 - -
5002 1.38629 1.38629 1.38629 1.38629
5003 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5004 9 2.53331 3.02441 0.20344 2.88069 9 - -
5005 1.38629 1.38629 1.38629 1.38629
5006 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5007 10 2.53331 3.02441 0.20344 2.88069 10 - -
5008 1.38629 1.38629 1.38629 1.38629
5009 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5010 11 2.81865 0.23582 2.88868 2.35662 11 - -
5011 1.38629 1.38629 1.38629 1.38629
5012 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5013 12 2.57915 2.25909 2.64442 0.28946 12 - -
5014 1.38629 1.38629 1.38629 1.38629
5015 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5016 13 2.57915 2.25909 2.64442 0.28946 13 - -
5017 1.38629 1.38629 1.38629 1.38629
5018 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5019 14 2.81865 0.23582 2.88868 2.35662 14 - -
5020 1.38629 1.38629 1.38629 1.38629
5021 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5022 15 2.53331 3.02441 0.20344 2.88069 15 - -
5023 1.38629 1.38629 1.38629 1.38629
5024 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5025 16 2.53331 3.02441 0.20344 2.88069 16 - -
5026 1.38629 1.38629 1.38629 1.38629
5027 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5028 17 2.81865 0.23582 2.88868 2.35662 17 - -
5029 1.38629 1.38629 1.38629 1.38629
5030 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5031 18 2.81865 0.23582 2.88868 2.35662 18 - -
5032 1.38629 1.38629 1.38629 1.38629
5033 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5034 19 2.53331 3.02441 0.20344 2.88069 19 - -
5035 1.38629 1.38629 1.38629 1.38629
5036 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5037 20 0.23862 2.84929 2.43386 2.70756 20 - -
5038 1.38629 1.38629 1.38629 1.38629
5039 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5040 21 2.53331 3.02441 0.20344 2.88069 21 - -
5041 1.38629 1.38629 1.38629 1.38629
5042 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5043 22 2.53331 3.02441 0.20344 2.88069 22 - -
5044 1.38629 1.38629 1.38629 1.38629
5045 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5046 23 2.53331 3.02441 0.20344 2.88069 23 - -
5047 1.38629 1.38629 1.38629 1.38629
5048 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5049 24 2.81865 0.23582 2.88868 2.35662 24 - -
5050 1.38629 1.38629 1.38629 1.38629
5051 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5052 25 0.23862 2.84929 2.43386 2.70756 25 - -
5053 1.38629 1.38629 1.38629 1.38629
5054 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5055 26 2.57915 2.25909 2.64442 0.28946 26 - -
5056 1.38629 1.38629 1.38629 1.38629
5057 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5058 27 2.53331 3.02441 0.20344 2.88069 27 - -
5059 1.38629 1.38629 1.38629 1.38629
5060 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5061 28 2.81865 0.23582 2.88868 2.35662 28 - -
5062 1.38629 1.38629 1.38629 1.38629
5063 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5064 29 2.81865 0.23582 2.88868 2.35662 29 - -
5065 1.38629 1.38629 1.38629 1.38629
5066 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5067 30 2.57915 2.25909 2.64442 0.28946 30 - -
5068 1.38629 1.38629 1.38629 1.38629
5069 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5070 31 2.53331 3.02441 0.20344 2.88069 31 - -
5071 1.38629 1.38629 1.38629 1.38629
5072 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5073 32 2.81865 0.23582 2.88868 2.35662 32 - -
5074 1.38629 1.38629 1.38629 1.38629
5075 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5076 33 2.81865 0.23582 2.88868 2.35662 33 - -
5077 1.38629 1.38629 1.38629 1.38629
5078 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5079 34 2.57915 2.25909 2.64442 0.28946 34 - -
5080 1.38629 1.38629 1.38629 1.38629
5081 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5082 35 2.81865 0.23582 2.88868 2.35662 35 - -
5083 1.38629 1.38629 1.38629 1.38629
5084 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5085 36 0.23862 2.84929 2.43386 2.70756 36 - -
5086 1.38629 1.38629 1.38629 1.38629
5087 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5088 37 2.53331 3.02441 0.20344 2.88069 37 - -
5089 1.38629 1.38629 1.38629 1.38629
5090 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5091 38 2.81865 0.23582 2.88868 2.35662 38 - -
5092 1.38629 1.38629 1.38629 1.38629
5093 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5094 39 2.53331 3.02441 0.20344 2.88069 39 - -
5095 1.38629 1.38629 1.38629 1.38629
5096 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5097 40 2.57915 2.25909 2.64442 0.28946 40 - -
5098 1.38629 1.38629 1.38629 1.38629
5099 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5100 41 2.81865 0.23582 2.88868 2.35662 41 - -
5101 1.38629 1.38629 1.38629 1.38629
5102 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5103 42 2.53331 3.02441 0.20344 2.88069 42 - -
5104 1.38629 1.38629 1.38629 1.38629
5105 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5106 43 2.53331 3.02441 0.20344 2.88069 43 - -
5107 1.38629 1.38629 1.38629 1.38629
5108 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5109 44 2.57915 2.25909 2.64442 0.28946 44 - -
5110 1.38629 1.38629 1.38629 1.38629
5111 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5112 45 2.57915 2.25909 2.64442 0.28946 45 - -
5113 1.38629 1.38629 1.38629 1.38629
5114 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
5115 //
5116 HMMER3/b [3.0 | March 2010]
5117 NAME 3_End_Chlorophyta_58S_end_twoc_long
5118 LENG 45
5119 ALPH DNA
5120 RF no
5121 CS no
5122 MAP yes
5123 DATE Sat Jan 28 01:04:47 2012
5124 NSEQ 15
5125 EFFN 3.475342
5126 CKSUM 461947662
5127 STATS LOCAL MSV -7.2050 0.71933
5128 STATS LOCAL VITERBI -7.8038 0.71933
5129 STATS LOCAL FORWARD -4.0938 0.71933
5130 HMM A C G T
5131 m->m m->i m->d i->m i->i d->m d->d
5132 COMPO 1.77648 1.19246 1.17175 1.52571
5133 1.38629 1.38629 1.38629 1.38629
5134 0.03588 4.03872 4.03872 1.46634 0.26236 0.00000 *
5135 1 2.98048 3.63588 0.11203 3.54560 1 - -
5136 1.38629 1.38629 1.38629 1.38629
5137 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5138 2 3.48793 0.12386 3.53504 2.86874 2 - -
5139 1.38629 1.38629 1.38629 1.38629
5140 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5141 3 2.98048 3.63588 0.11203 3.54560 3 - -
5142 1.38629 1.38629 1.38629 1.38629
5143 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5144 4 3.48793 0.12386 3.53504 2.86874 4 - -
5145 1.38629 1.38629 1.38629 1.38629
5146 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5147 5 3.13697 2.62586 3.18327 0.17107 5 - -
5148 1.38629 1.38629 1.38629 1.38629
5149 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5150 6 3.48793 0.12386 3.53504 2.86874 6 - -
5151 1.38629 1.38629 1.38629 1.38629
5152 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5153 7 2.98048 3.63588 0.11203 3.54560 7 - -
5154 1.38629 1.38629 1.38629 1.38629
5155 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5156 8 0.13576 3.42792 2.83279 3.33413 8 - -
5157 1.38629 1.38629 1.38629 1.38629
5158 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5159 9 3.48793 0.12386 3.53504 2.86874 9 - -
5160 1.38629 1.38629 1.38629 1.38629
5161 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5162 10 2.43808 1.01739 2.50945 0.75541 10 - -
5163 1.38629 1.38629 1.38629 1.38629
5164 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5165 11 3.48793 0.12386 3.53504 2.86874 11 - -
5166 1.38629 1.38629 1.38629 1.38629
5167 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5168 12 2.78360 0.35902 2.85076 1.70360 12 - -
5169 1.38629 1.38629 1.38629 1.38629
5170 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5171 13 3.13697 2.62586 3.18327 0.17107 13 - -
5172 1.38629 1.38629 1.38629 1.38629
5173 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5174 14 3.48793 0.12386 3.53504 2.86874 14 - -
5175 1.38629 1.38629 1.38629 1.38629
5176 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5177 15 2.98048 3.63588 0.11203 3.54560 15 - -
5178 1.38629 1.38629 1.38629 1.38629
5179 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5180 16 2.98048 3.63588 0.11203 3.54560 16 - -
5181 1.38629 1.38629 1.38629 1.38629
5182 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5183 17 0.78647 2.54355 0.98033 2.39936 17 - -
5184 1.38629 1.38629 1.38629 1.38629
5185 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5186 18 2.98048 3.63588 0.11203 3.54560 18 - -
5187 1.38629 1.38629 1.38629 1.38629
5188 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5189 19 0.13576 3.42792 2.83279 3.33413 19 - -
5190 1.38629 1.38629 1.38629 1.38629
5191 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5192 20 0.13576 3.42792 2.83279 3.33413 20 - -
5193 1.38629 1.38629 1.38629 1.38629
5194 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5195 21 2.98048 3.63588 0.11203 3.54560 21 - -
5196 1.38629 1.38629 1.38629 1.38629
5197 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5198 22 0.13576 3.42792 2.83279 3.33413 22 - -
5199 1.38629 1.38629 1.38629 1.38629
5200 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5201 23 2.98048 3.63588 0.11203 3.54560 23 - -
5202 1.38629 1.38629 1.38629 1.38629
5203 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5204 24 3.48793 0.12386 3.53504 2.86874 24 - -
5205 1.38629 1.38629 1.38629 1.38629
5206 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5207 25 0.13576 3.42792 2.83279 3.33413 25 - -
5208 1.38629 1.38629 1.38629 1.38629
5209 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5210 26 3.13697 2.62586 3.18327 0.17107 26 - -
5211 1.38629 1.38629 1.38629 1.38629
5212 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5213 27 2.98048 3.63588 0.11203 3.54560 27 - -
5214 1.38629 1.38629 1.38629 1.38629
5215 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5216 28 3.13697 2.62586 3.18327 0.17107 28 - -
5217 1.38629 1.38629 1.38629 1.38629
5218 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5219 29 3.48793 0.12386 3.53504 2.86874 29 - -
5220 1.38629 1.38629 1.38629 1.38629
5221 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5222 30 3.13697 2.62586 3.18327 0.17107 30 - -
5223 1.38629 1.38629 1.38629 1.38629
5224 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5225 31 2.98048 3.63588 0.11203 3.54560 31 - -
5226 1.38629 1.38629 1.38629 1.38629
5227 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5228 32 3.48793 0.12386 3.53504 2.86874 32 - -
5229 1.38629 1.38629 1.38629 1.38629
5230 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5231 33 3.48793 0.12386 3.53504 2.86874 33 - -
5232 1.38629 1.38629 1.38629 1.38629
5233 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5234 34 3.13697 2.62586 3.18327 0.17107 34 - -
5235 1.38629 1.38629 1.38629 1.38629
5236 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5237 35 3.48793 0.12386 3.53504 2.86874 35 - -
5238 1.38629 1.38629 1.38629 1.38629
5239 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5240 36 0.13576 3.42792 2.83279 3.33413 36 - -
5241 1.38629 1.38629 1.38629 1.38629
5242 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5243 37 2.98048 3.63588 0.11203 3.54560 37 - -
5244 1.38629 1.38629 1.38629 1.38629
5245 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5246 38 3.48793 0.12386 3.53504 2.86874 38 - -
5247 1.38629 1.38629 1.38629 1.38629
5248 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5249 39 2.98048 3.63588 0.11203 3.54560 39 - -
5250 1.38629 1.38629 1.38629 1.38629
5251 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5252 40 3.13697 2.62586 3.18327 0.17107 40 - -
5253 1.38629 1.38629 1.38629 1.38629
5254 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5255 41 3.48793 0.12386 3.53504 2.86874 41 - -
5256 1.38629 1.38629 1.38629 1.38629
5257 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5258 42 2.98048 3.63588 0.11203 3.54560 42 - -
5259 1.38629 1.38629 1.38629 1.38629
5260 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5261 43 2.98048 3.63588 0.11203 3.54560 43 - -
5262 1.38629 1.38629 1.38629 1.38629
5263 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5264 44 3.13697 2.62586 3.18327 0.17107 44 - -
5265 1.38629 1.38629 1.38629 1.38629
5266 0.03588 4.03872 4.03872 1.46634 0.26236 1.09861 0.40547
5267 45 3.13697 2.62586 3.18327 0.17107 45 - -
5268 1.38629 1.38629 1.38629 1.38629
5269 0.01810 4.02094 * 1.46634 0.26236 0.00000 *
5270 //
5271 HMMER3/b [3.0 | March 2010]
5272 NAME 3_End_Chlorophyta_58S_end_twod_long
5273 LENG 45
5274 ALPH DNA
5275 RF no
5276 CS no
5277 MAP yes
5278 DATE Sat Jan 28 01:04:52 2012
5279 NSEQ 8
5280 EFFN 3.128906
5281 CKSUM 2498164724
5282 STATS LOCAL MSV -7.9579 0.71933
5283 STATS LOCAL VITERBI -7.7563 0.71933
5284 STATS LOCAL FORWARD -3.6919 0.71933
5285 HMM A C G T
5286 m->m m->i m->d i->m i->i d->m d->d
5287 COMPO 1.82357 1.15560 1.14661 1.58002
5288 1.38629 1.38629 1.38629 1.38629
5289 0.03825 3.97573 3.97573 1.46634 0.26236 0.00000 *
5290 1 2.90228 3.52232 0.12458 3.42031 1 - -
5291 1.38629 1.38629 1.38629 1.38629
5292 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5293 2 3.35912 0.13939 3.41165 2.77481 2 - -
5294 1.38629 1.38629 1.38629 1.38629
5295 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5296 3 2.90228 3.52232 0.12458 3.42031 3 - -
5297 1.38629 1.38629 1.38629 1.38629
5298 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5299 4 3.35912 0.13939 3.41165 2.77481 4 - -
5300 1.38629 1.38629 1.38629 1.38629
5301 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5302 5 3.02437 2.55419 3.07496 0.18939 5 - -
5303 1.38629 1.38629 1.38629 1.38629
5304 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5305 6 3.35912 0.13939 3.41165 2.77481 6 - -
5306 1.38629 1.38629 1.38629 1.38629
5307 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5308 7 2.90228 3.52232 0.12458 3.42031 7 - -
5309 1.38629 1.38629 1.38629 1.38629
5310 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5311 8 0.15066 3.31617 2.76009 3.21184 8 - -
5312 1.38629 1.38629 1.38629 1.38629
5313 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5314 9 2.90228 3.52232 0.12458 3.42031 9 - -
5315 1.38629 1.38629 1.38629 1.38629
5316 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5317 10 3.35912 0.13939 3.41165 2.77481 10 - -
5318 1.38629 1.38629 1.38629 1.38629
5319 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5320 11 3.35912 0.13939 3.41165 2.77481 11 - -
5321 1.38629 1.38629 1.38629 1.38629
5322 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5323 12 3.35912 0.13939 3.41165 2.77481 12 - -
5324 1.38629 1.38629 1.38629 1.38629
5325 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5326 13 3.02437 2.55419 3.07496 0.18939 13 - -
5327 1.38629 1.38629 1.38629 1.38629
5328 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5329 14 3.35912 0.13939 3.41165 2.77481 14 - -
5330 1.38629 1.38629 1.38629 1.38629
5331 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5332 15 2.90228 3.52232 0.12458 3.42031 15 - -
5333 1.38629 1.38629 1.38629 1.38629
5334 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5335 16 2.90228 3.52232 0.12458 3.42031 16 - -
5336 1.38629 1.38629 1.38629 1.38629
5337 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5338 17 2.90228 3.52232 0.12458 3.42031 17 - -
5339 1.38629 1.38629 1.38629 1.38629
5340 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5341 18 3.35912 0.13939 3.41165 2.77481 18 - -
5342 1.38629 1.38629 1.38629 1.38629
5343 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5344 19 0.15066 3.31617 2.76009 3.21184 19 - -
5345 1.38629 1.38629 1.38629 1.38629
5346 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5347 20 0.15066 3.31617 2.76009 3.21184 20 - -
5348 1.38629 1.38629 1.38629 1.38629
5349 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5350 21 2.90228 3.52232 0.12458 3.42031 21 - -
5351 1.38629 1.38629 1.38629 1.38629
5352 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5353 22 0.15066 3.31617 2.76009 3.21184 22 - -
5354 1.38629 1.38629 1.38629 1.38629
5355 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5356 23 2.90228 3.52232 0.12458 3.42031 23 - -
5357 1.38629 1.38629 1.38629 1.38629
5358 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5359 24 3.35912 0.13939 3.41165 2.77481 24 - -
5360 1.38629 1.38629 1.38629 1.38629
5361 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5362 25 0.15066 3.31617 2.76009 3.21184 25 - -
5363 1.38629 1.38629 1.38629 1.38629
5364 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5365 26 3.02437 2.55419 3.07496 0.18939 26 - -
5366 1.38629 1.38629 1.38629 1.38629
5367 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5368 27 2.90228 3.52232 0.12458 3.42031 27 - -
5369 1.38629 1.38629 1.38629 1.38629
5370 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5371 28 3.02437 2.55419 3.07496 0.18939 28 - -
5372 1.38629 1.38629 1.38629 1.38629
5373 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5374 29 3.35912 0.13939 3.41165 2.77481 29 - -
5375 1.38629 1.38629 1.38629 1.38629
5376 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5377 30 3.02437 2.55419 3.07496 0.18939 30 - -
5378 1.38629 1.38629 1.38629 1.38629
5379 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5380 31 2.90228 3.52232 0.12458 3.42031 31 - -
5381 1.38629 1.38629 1.38629 1.38629
5382 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5383 32 3.35912 0.13939 3.41165 2.77481 32 - -
5384 1.38629 1.38629 1.38629 1.38629
5385 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5386 33 3.35912 0.13939 3.41165 2.77481 33 - -
5387 1.38629 1.38629 1.38629 1.38629
5388 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5389 34 3.02437 2.55419 3.07496 0.18939 34 - -
5390 1.38629 1.38629 1.38629 1.38629
5391 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5392 35 3.35912 0.13939 3.41165 2.77481 35 - -
5393 1.38629 1.38629 1.38629 1.38629
5394 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5395 36 0.15066 3.31617 2.76009 3.21184 36 - -
5396 1.38629 1.38629 1.38629 1.38629
5397 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5398 37 2.90228 3.52232 0.12458 3.42031 37 - -
5399 1.38629 1.38629 1.38629 1.38629
5400 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5401 38 3.35912 0.13939 3.41165 2.77481 38 - -
5402 1.38629 1.38629 1.38629 1.38629
5403 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5404 39 2.90228 3.52232 0.12458 3.42031 39 - -
5405 1.38629 1.38629 1.38629 1.38629
5406 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5407 40 3.02437 2.55419 3.07496 0.18939 40 - -
5408 1.38629 1.38629 1.38629 1.38629
5409 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5410 41 3.35912 0.13939 3.41165 2.77481 41 - -
5411 1.38629 1.38629 1.38629 1.38629
5412 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5413 42 2.90228 3.52232 0.12458 3.42031 42 - -
5414 1.38629 1.38629 1.38629 1.38629
5415 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5416 43 2.90228 3.52232 0.12458 3.42031 43 - -
5417 1.38629 1.38629 1.38629 1.38629
5418 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5419 44 3.02437 2.55419 3.07496 0.18939 44 - -
5420 1.38629 1.38629 1.38629 1.38629
5421 0.03825 3.97573 3.97573 1.46634 0.26236 1.09861 0.40547
5422 45 3.02437 2.55419 3.07496 0.18939 45 - -
5423 1.38629 1.38629 1.38629 1.38629
5424 0.01931 3.95679 * 1.46634 0.26236 0.00000 *
5425 //
5426 HMMER3/b [3.0 | March 2010]
5427 NAME 2_5.8_Chlorophyta_58S_start_four_long
5428 LENG 45
5429 ALPH DNA
5430 RF no
5431 CS no
5432 MAP yes
5433 DATE Fri Jan 27 23:54:20 2012
5434 NSEQ 48
5435 EFFN 3.495117
5436 CKSUM 2952332647
5437 STATS LOCAL MSV -7.2226 0.71933
5438 STATS LOCAL VITERBI -7.7596 0.71933
5439 STATS LOCAL FORWARD -3.9921 0.71933
5440 HMM A C G T
5441 m->m m->i m->d i->m i->i d->m d->d
5442 COMPO 1.54562 1.42507 1.04449 1.63755
5443 1.38629 1.38629 1.38629 1.38629
5444 0.03575 4.04219 4.04219 1.46634 0.26236 0.00000 *
5445 1 0.40589 2.56427 2.39377 1.79967 1 - -
5446 1.38629 1.38629 1.38629 1.38629
5447 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5448 2 0.13501 3.43391 2.83666 3.34071 2 - -
5449 1.38629 1.38629 1.38629 1.38629
5450 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5451 3 0.13501 3.43391 2.83666 3.34071 3 - -
5452 1.38629 1.38629 1.38629 1.38629
5453 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5454 4 2.98459 3.64191 0.11140 3.55227 4 - -
5455 1.38629 1.38629 1.38629 1.38629
5456 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5457 5 3.49482 0.12308 3.54162 2.87371 5 - -
5458 1.38629 1.38629 1.38629 1.38629
5459 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5460 6 0.13501 3.43391 2.83666 3.34071 6 - -
5461 1.38629 1.38629 1.38629 1.38629
5462 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5463 7 3.14310 2.62975 3.18915 0.17014 7 - -
5464 1.38629 1.38629 1.38629 1.38629
5465 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5466 8 2.98459 3.64191 0.11140 3.55227 8 - -
5467 1.38629 1.38629 1.38629 1.38629
5468 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5469 9 3.49482 0.12308 3.54162 2.87371 9 - -
5470 1.38629 1.38629 1.38629 1.38629
5471 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5472 10 2.98459 3.64191 0.11140 3.55227 10 - -
5473 1.38629 1.38629 1.38629 1.38629
5474 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5475 11 3.01425 2.32087 3.06521 0.21557 11 - -
5476 1.38629 1.38629 1.38629 1.38629
5477 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5478 12 1.55253 2.79478 0.41999 2.65775 12 - -
5479 1.38629 1.38629 1.38629 1.38629
5480 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5481 13 2.98459 3.64191 0.11140 3.55227 13 - -
5482 1.38629 1.38629 1.38629 1.38629
5483 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5484 14 3.14310 2.62975 3.18915 0.17014 14 - -
5485 1.38629 1.38629 1.38629 1.38629
5486 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5487 15 2.88296 3.18424 0.14323 3.32242 15 - -
5488 1.38629 1.38629 1.38629 1.38629
5489 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5490 16 2.98459 3.64191 0.11140 3.55227 16 - -
5491 1.38629 1.38629 1.38629 1.38629
5492 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5493 17 0.13501 3.43391 2.83666 3.34071 17 - -
5494 1.38629 1.38629 1.38629 1.38629
5495 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5496 18 3.49482 0.12308 3.54162 2.87371 18 - -
5497 1.38629 1.38629 1.38629 1.38629
5498 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5499 19 2.98459 3.64191 0.11140 3.55227 19 - -
5500 1.38629 1.38629 1.38629 1.38629
5501 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5502 20 2.98459 3.64191 0.11140 3.55227 20 - -
5503 1.38629 1.38629 1.38629 1.38629
5504 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5505 21 3.49482 0.12308 3.54162 2.87371 21 - -
5506 1.38629 1.38629 1.38629 1.38629
5507 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5508 22 3.14310 2.62975 3.18915 0.17014 22 - -
5509 1.38629 1.38629 1.38629 1.38629
5510 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5511 23 3.49482 0.12308 3.54162 2.87371 23 - -
5512 1.38629 1.38629 1.38629 1.38629
5513 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5514 24 2.98459 3.64191 0.11140 3.55227 24 - -
5515 1.38629 1.38629 1.38629 1.38629
5516 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5517 25 2.98459 3.64191 0.11140 3.55227 25 - -
5518 1.38629 1.38629 1.38629 1.38629
5519 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5520 26 3.14310 2.62975 3.18915 0.17014 26 - -
5521 1.38629 1.38629 1.38629 1.38629
5522 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5523 27 3.14310 2.62975 3.18915 0.17014 27 - -
5524 1.38629 1.38629 1.38629 1.38629
5525 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5526 28 3.49482 0.12308 3.54162 2.87371 28 - -
5527 1.38629 1.38629 1.38629 1.38629
5528 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5529 29 3.18468 0.19693 3.24155 2.32019 29 - -
5530 1.38629 1.38629 1.38629 1.38629
5531 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5532 30 3.36400 0.15102 3.41504 2.62150 30 - -
5533 1.38629 1.38629 1.38629 1.38629
5534 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5535 31 2.98459 3.64191 0.11140 3.55227 31 - -
5536 1.38629 1.38629 1.38629 1.38629
5537 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5538 32 2.61430 0.48908 2.68457 1.40511 32 - -
5539 1.38629 1.38629 1.38629 1.38629
5540 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5541 33 2.98459 3.64191 0.11140 3.55227 33 - -
5542 1.38629 1.38629 1.38629 1.38629
5543 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5544 34 3.14310 2.62975 3.18915 0.17014 34 - -
5545 1.38629 1.38629 1.38629 1.38629
5546 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5547 35 3.49482 0.12308 3.54162 2.87371 35 - -
5548 1.38629 1.38629 1.38629 1.38629
5549 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5550 36 2.98459 3.64191 0.11140 3.55227 36 - -
5551 1.38629 1.38629 1.38629 1.38629
5552 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5553 37 0.13501 3.43391 2.83666 3.34071 37 - -
5554 1.38629 1.38629 1.38629 1.38629
5555 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5556 38 3.14310 2.62975 3.18915 0.17014 38 - -
5557 1.38629 1.38629 1.38629 1.38629
5558 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5559 39 2.98459 3.64191 0.11140 3.55227 39 - -
5560 1.38629 1.38629 1.38629 1.38629
5561 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5562 40 0.13501 3.43391 2.83666 3.34071 40 - -
5563 1.38629 1.38629 1.38629 1.38629
5564 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5565 41 0.13501 3.43391 2.83666 3.34071 41 - -
5566 1.38629 1.38629 1.38629 1.38629
5567 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5568 42 2.98459 3.64191 0.11140 3.55227 42 - -
5569 1.38629 1.38629 1.38629 1.38629
5570 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5571 43 2.98459 3.64191 0.11140 3.55227 43 - -
5572 1.38629 1.38629 1.38629 1.38629
5573 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5574 44 0.13501 3.43391 2.83666 3.34071 44 - -
5575 1.38629 1.38629 1.38629 1.38629
5576 0.03575 4.04219 4.04219 1.46634 0.26236 1.09861 0.40547
5577 45 3.49482 0.12308 3.54162 2.87371 45 - -
5578 1.38629 1.38629 1.38629 1.38629
5579 0.01803 4.02448 * 1.46634 0.26236 0.00000 *
5580 //
5581 HMMER3/b [3.0 | March 2010]
5582 NAME 2_5.8_Chlorophyta_58S_start_one_long
5583 LENG 45
5584 ALPH DNA
5585 RF no
5586 CS no
5587 MAP yes
5588 DATE Fri Jan 27 23:53:55 2012
5589 NSEQ 331
5590 EFFN 3.851128
5591 CKSUM 2567582358
5592 STATS LOCAL MSV -7.4488 0.71932
5593 STATS LOCAL VITERBI -7.4861 0.71932
5594 STATS LOCAL FORWARD -4.0022 0.71932
5595 HMM A C G T
5596 m->m m->i m->d i->m i->i d->m d->d
5597 COMPO 1.16656 1.27448 1.60501 1.56974
5598 1.38629 1.38629 1.38629 1.38629
5599 0.03361 4.10283 4.10283 1.46634 0.26236 0.00000 *
5600 1 3.50422 0.13202 3.54985 2.73523 1 - -
5601 1.38629 1.38629 1.38629 1.38629
5602 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5603 2 0.12300 3.53547 2.90198 3.45220 2 - -
5604 1.38629 1.38629 1.38629 1.38629
5605 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5606 3 0.12300 3.53547 2.90198 3.45220 3 - -
5607 1.38629 1.38629 1.38629 1.38629
5608 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5609 4 3.61086 0.11087 3.65245 2.95674 4 - -
5610 1.38629 1.38629 1.38629 1.38629
5611 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5612 5 3.24813 2.69634 3.29008 0.15496 5 - -
5613 1.38629 1.38629 1.38629 1.38629
5614 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5615 6 3.61086 0.11087 3.65245 2.95674 6 - -
5616 1.38629 1.38629 1.38629 1.38629
5617 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5618 7 3.24813 2.69634 3.29008 0.15496 7 - -
5619 1.38629 1.38629 1.38629 1.38629
5620 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5621 8 3.61086 0.11087 3.65245 2.95674 8 - -
5622 1.38629 1.38629 1.38629 1.38629
5623 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5624 9 0.15822 3.33237 2.81684 2.97919 9 - -
5625 1.38629 1.38629 1.38629 1.38629
5626 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5627 10 0.12300 3.53547 2.90198 3.45220 10 - -
5628 1.38629 1.38629 1.38629 1.38629
5629 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5630 11 3.61086 0.11087 3.65245 2.95674 11 - -
5631 1.38629 1.38629 1.38629 1.38629
5632 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5633 12 0.12300 3.53547 2.90198 3.45220 12 - -
5634 1.38629 1.38629 1.38629 1.38629
5635 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5636 13 0.12300 3.53547 2.90198 3.45220 13 - -
5637 1.38629 1.38629 1.38629 1.38629
5638 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5639 14 3.50903 0.13102 3.55448 2.74453 14 - -
5640 1.38629 1.38629 1.38629 1.38629
5641 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5642 15 3.05296 3.74278 0.10152 3.66406 15 - -
5643 1.38629 1.38629 1.38629 1.38629
5644 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5645 16 3.05296 3.74278 0.10152 3.66406 16 - -
5646 1.38629 1.38629 1.38629 1.38629
5647 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5648 17 0.12300 3.53547 2.90198 3.45220 17 - -
5649 1.38629 1.38629 1.38629 1.38629
5650 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5651 18 3.24813 2.69634 3.29008 0.15496 18 - -
5652 1.38629 1.38629 1.38629 1.38629
5653 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5654 19 0.14638 3.44359 2.66951 3.35433 19 - -
5655 1.38629 1.38629 1.38629 1.38629
5656 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5657 20 3.24813 2.69634 3.29008 0.15496 20 - -
5658 1.38629 1.38629 1.38629 1.38629
5659 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5660 21 3.15237 0.14262 3.44032 2.84542 21 - -
5661 1.38629 1.38629 1.38629 1.38629
5662 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5663 22 3.24813 2.69634 3.29008 0.15496 22 - -
5664 1.38629 1.38629 1.38629 1.38629
5665 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5666 23 2.56157 2.56948 2.98235 0.22870 23 - -
5667 1.38629 1.38629 1.38629 1.38629
5668 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5669 24 3.05296 3.74278 0.10152 3.66406 24 - -
5670 1.38629 1.38629 1.38629 1.38629
5671 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5672 25 3.05296 3.74278 0.10152 3.66406 25 - -
5673 1.38629 1.38629 1.38629 1.38629
5674 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5675 26 3.61086 0.11087 3.65245 2.95674 26 - -
5676 1.38629 1.38629 1.38629 1.38629
5677 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5678 27 3.24813 2.69634 3.29008 0.15496 27 - -
5679 1.38629 1.38629 1.38629 1.38629
5680 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5681 28 3.61086 0.11087 3.65245 2.95674 28 - -
5682 1.38629 1.38629 1.38629 1.38629
5683 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5684 29 2.64088 1.41397 2.70662 0.48003 29 - -
5685 1.38629 1.38629 1.38629 1.38629
5686 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5687 30 3.46311 0.14077 3.51034 2.65795 30 - -
5688 1.38629 1.38629 1.38629 1.38629
5689 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5690 31 2.35815 2.89431 0.22091 3.03081 31 - -
5691 1.38629 1.38629 1.38629 1.38629
5692 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5693 32 2.19068 0.69821 1.79649 1.49252 32 - -
5694 1.38629 1.38629 1.38629 1.38629
5695 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5696 33 0.12300 3.53547 2.90198 3.45220 33 - -
5697 1.38629 1.38629 1.38629 1.38629
5698 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5699 34 0.55932 2.20720 2.26768 1.53784 34 - -
5700 1.38629 1.38629 1.38629 1.38629
5701 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5702 35 3.46311 0.14077 3.51034 2.65795 35 - -
5703 1.38629 1.38629 1.38629 1.38629
5704 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5705 36 3.05296 3.74278 0.10152 3.66406 36 - -
5706 1.38629 1.38629 1.38629 1.38629
5707 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5708 37 0.12300 3.53547 2.90198 3.45220 37 - -
5709 1.38629 1.38629 1.38629 1.38629
5710 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5711 38 3.24813 2.69634 3.29008 0.15496 38 - -
5712 1.38629 1.38629 1.38629 1.38629
5713 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5714 39 3.05296 3.74278 0.10152 3.66406 39 - -
5715 1.38629 1.38629 1.38629 1.38629
5716 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5717 40 0.12300 3.53547 2.90198 3.45220 40 - -
5718 1.38629 1.38629 1.38629 1.38629
5719 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5720 41 0.12300 3.53547 2.90198 3.45220 41 - -
5721 1.38629 1.38629 1.38629 1.38629
5722 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5723 42 3.05296 3.74278 0.10152 3.66406 42 - -
5724 1.38629 1.38629 1.38629 1.38629
5725 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5726 43 0.12300 3.53547 2.90198 3.45220 43 - -
5727 1.38629 1.38629 1.38629 1.38629
5728 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5729 44 0.12300 3.53547 2.90198 3.45220 44 - -
5730 1.38629 1.38629 1.38629 1.38629
5731 0.03361 4.10283 4.10283 1.46634 0.26236 1.09861 0.40547
5732 45 3.61086 0.11087 3.65245 2.95674 45 - -
5733 1.38629 1.38629 1.38629 1.38629
5734 0.01695 4.08617 * 1.46634 0.26236 0.00000 *
5735 //
5736 HMMER3/b [3.0 | March 2010]
5737 NAME 2_5.8_Chlorophyta_58S_start_three_long
5738 LENG 45
5739 ALPH DNA
5740 RF no
5741 CS no
5742 MAP yes
5743 DATE Fri Jan 27 23:54:11 2012
5744 NSEQ 3
5745 EFFN 3.000000
5746 CKSUM 1723857228
5747 STATS LOCAL MSV -7.9701 0.72049
5748 STATS LOCAL VITERBI -7.6631 0.72049
5749 STATS LOCAL FORWARD -3.9650 0.72049
5750 HMM A C G T
5751 m->m m->i m->d i->m i->i d->m d->d
5752 COMPO 1.21943 1.38802 1.60191 1.37230
5753 1.38629 1.38629 1.38629 1.38629
5754 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
5755 1 0.15719 3.27118 2.73043 3.16274 1 - -
5756 1.38629 1.38629 1.38629 1.38629
5757 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5758 2 0.15719 3.27118 2.73043 3.16274 2 - -
5759 1.38629 1.38629 1.38629 1.38629
5760 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5761 3 0.15719 3.27118 2.73043 3.16274 3 - -
5762 1.38629 1.38629 1.38629 1.38629
5763 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5764 4 3.30705 0.14631 3.36166 2.73626 4 - -
5765 1.38629 1.38629 1.38629 1.38629
5766 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5767 5 2.97980 2.52563 3.03204 0.19727 5 - -
5768 1.38629 1.38629 1.38629 1.38629
5769 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5770 6 2.97980 2.52563 3.03204 0.19727 6 - -
5771 1.38629 1.38629 1.38629 1.38629
5772 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5773 7 2.97980 2.52563 3.03204 0.19727 7 - -
5774 1.38629 1.38629 1.38629 1.38629
5775 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5776 8 2.97980 2.52563 3.03204 0.19727 8 - -
5777 1.38629 1.38629 1.38629 1.38629
5778 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5779 9 0.15719 3.27118 2.73043 3.16274 9 - -
5780 1.38629 1.38629 1.38629 1.38629
5781 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5782 10 0.15719 3.27118 2.73043 3.16274 10 - -
5783 1.38629 1.38629 1.38629 1.38629
5784 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5785 11 3.30705 0.14631 3.36166 2.73626 11 - -
5786 1.38629 1.38629 1.38629 1.38629
5787 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5788 12 0.15719 3.27118 2.73043 3.16274 12 - -
5789 1.38629 1.38629 1.38629 1.38629
5790 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5791 13 0.15719 3.27118 2.73043 3.16274 13 - -
5792 1.38629 1.38629 1.38629 1.38629
5793 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5794 14 3.30705 0.14631 3.36166 2.73626 14 - -
5795 1.38629 1.38629 1.38629 1.38629
5796 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5797 15 2.86982 3.47591 0.13017 3.36931 15 - -
5798 1.38629 1.38629 1.38629 1.38629
5799 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5800 16 2.86982 3.47591 0.13017 3.36931 16 - -
5801 1.38629 1.38629 1.38629 1.38629
5802 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5803 17 0.15719 3.27118 2.73043 3.16274 17 - -
5804 1.38629 1.38629 1.38629 1.38629
5805 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5806 18 2.97980 2.52563 3.03204 0.19727 18 - -
5807 1.38629 1.38629 1.38629 1.38629
5808 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5809 19 3.30705 0.14631 3.36166 2.73626 19 - -
5810 1.38629 1.38629 1.38629 1.38629
5811 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5812 20 2.97980 2.52563 3.03204 0.19727 20 - -
5813 1.38629 1.38629 1.38629 1.38629
5814 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5815 21 3.30705 0.14631 3.36166 2.73626 21 - -
5816 1.38629 1.38629 1.38629 1.38629
5817 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5818 22 2.97980 2.52563 3.03204 0.19727 22 - -
5819 1.38629 1.38629 1.38629 1.38629
5820 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5821 23 2.97980 2.52563 3.03204 0.19727 23 - -
5822 1.38629 1.38629 1.38629 1.38629
5823 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5824 24 2.86982 3.47591 0.13017 3.36931 24 - -
5825 1.38629 1.38629 1.38629 1.38629
5826 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5827 25 2.86982 3.47591 0.13017 3.36931 25 - -
5828 1.38629 1.38629 1.38629 1.38629
5829 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5830 26 3.30705 0.14631 3.36166 2.73626 26 - -
5831 1.38629 1.38629 1.38629 1.38629
5832 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5833 27 2.97980 2.52563 3.03204 0.19727 27 - -
5834 1.38629 1.38629 1.38629 1.38629
5835 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5836 28 3.30705 0.14631 3.36166 2.73626 28 - -
5837 1.38629 1.38629 1.38629 1.38629
5838 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5839 29 2.97980 2.52563 3.03204 0.19727 29 - -
5840 1.38629 1.38629 1.38629 1.38629
5841 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5842 30 3.30705 0.14631 3.36166 2.73626 30 - -
5843 1.38629 1.38629 1.38629 1.38629
5844 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5845 31 2.86982 3.47591 0.13017 3.36931 31 - -
5846 1.38629 1.38629 1.38629 1.38629
5847 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5848 32 3.30705 0.14631 3.36166 2.73626 32 - -
5849 1.38629 1.38629 1.38629 1.38629
5850 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5851 33 0.15719 3.27118 2.73043 3.16274 33 - -
5852 1.38629 1.38629 1.38629 1.38629
5853 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5854 34 2.97980 2.52563 3.03204 0.19727 34 - -
5855 1.38629 1.38629 1.38629 1.38629
5856 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5857 35 3.30705 0.14631 3.36166 2.73626 35 - -
5858 1.38629 1.38629 1.38629 1.38629
5859 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5860 36 2.86982 3.47591 0.13017 3.36931 36 - -
5861 1.38629 1.38629 1.38629 1.38629
5862 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5863 37 0.15719 3.27118 2.73043 3.16274 37 - -
5864 1.38629 1.38629 1.38629 1.38629
5865 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5866 38 2.97980 2.52563 3.03204 0.19727 38 - -
5867 1.38629 1.38629 1.38629 1.38629
5868 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5869 39 2.86982 3.47591 0.13017 3.36931 39 - -
5870 1.38629 1.38629 1.38629 1.38629
5871 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5872 40 0.15719 3.27118 2.73043 3.16274 40 - -
5873 1.38629 1.38629 1.38629 1.38629
5874 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5875 41 0.15719 3.27118 2.73043 3.16274 41 - -
5876 1.38629 1.38629 1.38629 1.38629
5877 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5878 42 2.86982 3.47591 0.13017 3.36931 42 - -
5879 1.38629 1.38629 1.38629 1.38629
5880 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5881 43 0.15719 3.27118 2.73043 3.16274 43 - -
5882 1.38629 1.38629 1.38629 1.38629
5883 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5884 44 0.15719 3.27118 2.73043 3.16274 44 - -
5885 1.38629 1.38629 1.38629 1.38629
5886 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
5887 45 3.30705 0.14631 3.36166 2.73626 45 - -
5888 1.38629 1.38629 1.38629 1.38629
5889 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
5890 //
5891 HMMER3/b [3.0 | March 2010]
5892 NAME 2_5.8_Chlorophyta_58S_start_two_long
5893 LENG 45
5894 ALPH DNA
5895 RF no
5896 CS no
5897 MAP yes
5898 DATE Fri Jan 27 23:54:03 2012
5899 NSEQ 2
5900 EFFN 2.000000
5901 CKSUM 1810826480
5902 STATS LOCAL MSV -7.3071 0.72810
5903 STATS LOCAL VITERBI -8.2380 0.72810
5904 STATS LOCAL FORWARD -3.8550 0.72810
5905 HMM A C G T
5906 m->m m->i m->d i->m i->i d->m d->d
5907 COMPO 1.23917 1.28915 1.56888 1.48462
5908 1.38629 1.38629 1.38629 1.38629
5909 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
5910 1 0.23862 2.84929 2.43386 2.70756 1 - -
5911 1.38629 1.38629 1.38629 1.38629
5912 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5913 2 2.81865 0.23582 2.88868 2.35662 2 - -
5914 1.38629 1.38629 1.38629 1.38629
5915 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5916 3 0.23862 2.84929 2.43386 2.70756 3 - -
5917 1.38629 1.38629 1.38629 1.38629
5918 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5919 4 2.81865 0.23582 2.88868 2.35662 4 - -
5920 1.38629 1.38629 1.38629 1.38629
5921 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5922 5 0.23862 2.84929 2.43386 2.70756 5 - -
5923 1.38629 1.38629 1.38629 1.38629
5924 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5925 6 2.81865 0.23582 2.88868 2.35662 6 - -
5926 1.38629 1.38629 1.38629 1.38629
5927 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5928 7 2.57915 2.25909 2.64442 0.28946 7 - -
5929 1.38629 1.38629 1.38629 1.38629
5930 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5931 8 2.53331 3.02441 0.20344 2.88069 8 - -
5932 1.38629 1.38629 1.38629 1.38629
5933 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5934 9 2.57915 2.25909 2.64442 0.28946 9 - -
5935 1.38629 1.38629 1.38629 1.38629
5936 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5937 10 0.23862 2.84929 2.43386 2.70756 10 - -
5938 1.38629 1.38629 1.38629 1.38629
5939 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5940 11 2.81865 0.23582 2.88868 2.35662 11 - -
5941 1.38629 1.38629 1.38629 1.38629
5942 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5943 12 0.23862 2.84929 2.43386 2.70756 12 - -
5944 1.38629 1.38629 1.38629 1.38629
5945 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5946 13 0.23862 2.84929 2.43386 2.70756 13 - -
5947 1.38629 1.38629 1.38629 1.38629
5948 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5949 14 2.57915 2.25909 2.64442 0.28946 14 - -
5950 1.38629 1.38629 1.38629 1.38629
5951 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5952 15 2.53331 3.02441 0.20344 2.88069 15 - -
5953 1.38629 1.38629 1.38629 1.38629
5954 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5955 16 2.53331 3.02441 0.20344 2.88069 16 - -
5956 1.38629 1.38629 1.38629 1.38629
5957 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5958 17 0.23862 2.84929 2.43386 2.70756 17 - -
5959 1.38629 1.38629 1.38629 1.38629
5960 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5961 18 2.57915 2.25909 2.64442 0.28946 18 - -
5962 1.38629 1.38629 1.38629 1.38629
5963 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5964 19 2.57915 2.25909 2.64442 0.28946 19 - -
5965 1.38629 1.38629 1.38629 1.38629
5966 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5967 20 2.57915 2.25909 2.64442 0.28946 20 - -
5968 1.38629 1.38629 1.38629 1.38629
5969 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5970 21 2.81865 0.23582 2.88868 2.35662 21 - -
5971 1.38629 1.38629 1.38629 1.38629
5972 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5973 22 2.57915 2.25909 2.64442 0.28946 22 - -
5974 1.38629 1.38629 1.38629 1.38629
5975 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5976 23 2.81865 0.23582 2.88868 2.35662 23 - -
5977 1.38629 1.38629 1.38629 1.38629
5978 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5979 24 2.53331 3.02441 0.20344 2.88069 24 - -
5980 1.38629 1.38629 1.38629 1.38629
5981 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5982 25 2.53331 3.02441 0.20344 2.88069 25 - -
5983 1.38629 1.38629 1.38629 1.38629
5984 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5985 26 2.81865 0.23582 2.88868 2.35662 26 - -
5986 1.38629 1.38629 1.38629 1.38629
5987 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5988 27 2.57915 2.25909 2.64442 0.28946 27 - -
5989 1.38629 1.38629 1.38629 1.38629
5990 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5991 28 2.81865 0.23582 2.88868 2.35662 28 - -
5992 1.38629 1.38629 1.38629 1.38629
5993 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5994 29 2.81865 0.23582 2.88868 2.35662 29 - -
5995 1.38629 1.38629 1.38629 1.38629
5996 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
5997 30 2.81865 0.23582 2.88868 2.35662 30 - -
5998 1.38629 1.38629 1.38629 1.38629
5999 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6000 31 0.23862 2.84929 2.43386 2.70756 31 - -
6001 1.38629 1.38629 1.38629 1.38629
6002 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6003 32 2.81865 0.23582 2.88868 2.35662 32 - -
6004 1.38629 1.38629 1.38629 1.38629
6005 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6006 33 0.23862 2.84929 2.43386 2.70756 33 - -
6007 1.38629 1.38629 1.38629 1.38629
6008 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6009 34 2.57915 2.25909 2.64442 0.28946 34 - -
6010 1.38629 1.38629 1.38629 1.38629
6011 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6012 35 2.81865 0.23582 2.88868 2.35662 35 - -
6013 1.38629 1.38629 1.38629 1.38629
6014 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6015 36 2.53331 3.02441 0.20344 2.88069 36 - -
6016 1.38629 1.38629 1.38629 1.38629
6017 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6018 37 0.23862 2.84929 2.43386 2.70756 37 - -
6019 1.38629 1.38629 1.38629 1.38629
6020 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6021 38 2.57915 2.25909 2.64442 0.28946 38 - -
6022 1.38629 1.38629 1.38629 1.38629
6023 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6024 39 2.53331 3.02441 0.20344 2.88069 39 - -
6025 1.38629 1.38629 1.38629 1.38629
6026 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6027 40 0.23862 2.84929 2.43386 2.70756 40 - -
6028 1.38629 1.38629 1.38629 1.38629
6029 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6030 41 0.23862 2.84929 2.43386 2.70756 41 - -
6031 1.38629 1.38629 1.38629 1.38629
6032 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6033 42 2.53331 3.02441 0.20344 2.88069 42 - -
6034 1.38629 1.38629 1.38629 1.38629
6035 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6036 43 0.23862 2.84929 2.43386 2.70756 43 - -
6037 1.38629 1.38629 1.38629 1.38629
6038 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6039 44 0.23862 2.84929 2.43386 2.70756 44 - -
6040 1.38629 1.38629 1.38629 1.38629
6041 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
6042 45 2.81865 0.23582 2.88868 2.35662 45 - -
6043 1.38629 1.38629 1.38629 1.38629
6044 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
6045 //
6046 HMMER3/b [3.0 | March 2010]
6047 NAME 4_LSU_Chlorophyta_4_LSU_start_four_long
6048 LENG 45
6049 ALPH DNA
6050 RF no
6051 CS no
6052 MAP yes
6053 DATE Sat Jan 28 01:33:17 2012
6054 NSEQ 32
6055 EFFN 3.527344
6056 CKSUM 2012743755
6057 STATS LOCAL MSV -7.4497 0.71931
6058 STATS LOCAL VITERBI -7.6973 0.71931
6059 STATS LOCAL FORWARD -4.3994 0.71931
6060 HMM A C G T
6061 m->m m->i m->d i->m i->i d->m d->d
6062 COMPO 1.35480 1.36244 1.23357 1.63622
6063 1.38629 1.38629 1.38629 1.38629
6064 0.03554 4.04784 4.04784 1.46634 0.26236 0.00000 *
6065 1 0.93968 1.86458 1.85543 1.21099 1 - -
6066 1.38629 1.38629 1.38629 1.38629
6067 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6068 2 1.23504 1.09122 1.83280 1.54455 2 - -
6069 1.38629 1.38629 1.38629 1.38629
6070 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6071 3 2.99121 3.65163 0.11040 3.56302 3 - -
6072 1.38629 1.38629 1.38629 1.38629
6073 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6074 4 3.50594 0.12185 3.55225 2.88172 4 - -
6075 1.38629 1.38629 1.38629 1.38629
6076 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6077 5 2.91322 2.09109 2.96826 0.26039 5 - -
6078 1.38629 1.38629 1.38629 1.38629
6079 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6080 6 2.99121 3.65163 0.11040 3.56302 6 - -
6081 1.38629 1.38629 1.38629 1.38629
6082 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6083 7 3.50594 0.12185 3.55225 2.88172 7 - -
6084 1.38629 1.38629 1.38629 1.38629
6085 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6086 8 2.99121 3.65163 0.11040 3.56302 8 - -
6087 1.38629 1.38629 1.38629 1.38629
6088 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6089 9 0.13381 3.44360 2.84291 3.35134 9 - -
6090 1.38629 1.38629 1.38629 1.38629
6091 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6092 10 3.15301 2.63604 3.19868 0.16864 10 - -
6093 1.38629 1.38629 1.38629 1.38629
6094 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6095 11 2.99121 3.65163 0.11040 3.56302 11 - -
6096 1.38629 1.38629 1.38629 1.38629
6097 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6098 12 3.15301 2.63604 3.19868 0.16864 12 - -
6099 1.38629 1.38629 1.38629 1.38629
6100 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6101 13 3.50594 0.12185 3.55225 2.88172 13 - -
6102 1.38629 1.38629 1.38629 1.38629
6103 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6104 14 2.99121 3.65163 0.11040 3.56302 14 - -
6105 1.38629 1.38629 1.38629 1.38629
6106 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6107 15 3.15301 2.63604 3.19868 0.16864 15 - -
6108 1.38629 1.38629 1.38629 1.38629
6109 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6110 16 3.50594 0.12185 3.55225 2.88172 16 - -
6111 1.38629 1.38629 1.38629 1.38629
6112 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6113 17 2.99121 3.65163 0.11040 3.56302 17 - -
6114 1.38629 1.38629 1.38629 1.38629
6115 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6116 18 2.99121 3.65163 0.11040 3.56302 18 - -
6117 1.38629 1.38629 1.38629 1.38629
6118 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6119 19 3.50594 0.12185 3.55225 2.88172 19 - -
6120 1.38629 1.38629 1.38629 1.38629
6121 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6122 20 2.99121 3.65163 0.11040 3.56302 20 - -
6123 1.38629 1.38629 1.38629 1.38629
6124 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6125 21 0.13381 3.44360 2.84291 3.35134 21 - -
6126 1.38629 1.38629 1.38629 1.38629
6127 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6128 22 2.99121 3.65163 0.11040 3.56302 22 - -
6129 1.38629 1.38629 1.38629 1.38629
6130 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6131 23 2.99121 3.65163 0.11040 3.56302 23 - -
6132 1.38629 1.38629 1.38629 1.38629
6133 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6134 24 0.13381 3.44360 2.84291 3.35134 24 - -
6135 1.38629 1.38629 1.38629 1.38629
6136 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6137 25 0.13381 3.44360 2.84291 3.35134 25 - -
6138 1.38629 1.38629 1.38629 1.38629
6139 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6140 26 0.13381 3.44360 2.84291 3.35134 26 - -
6141 1.38629 1.38629 1.38629 1.38629
6142 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6143 27 3.50594 0.12185 3.55225 2.88172 27 - -
6144 1.38629 1.38629 1.38629 1.38629
6145 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6146 28 3.50594 0.12185 3.55225 2.88172 28 - -
6147 1.38629 1.38629 1.38629 1.38629
6148 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6149 29 3.50594 0.12185 3.55225 2.88172 29 - -
6150 1.38629 1.38629 1.38629 1.38629
6151 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6152 30 2.99121 3.65163 0.11040 3.56302 30 - -
6153 1.38629 1.38629 1.38629 1.38629
6154 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6155 31 3.50594 0.12185 3.55225 2.88172 31 - -
6156 1.38629 1.38629 1.38629 1.38629
6157 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6158 32 3.15301 2.63604 3.19868 0.16864 32 - -
6159 1.38629 1.38629 1.38629 1.38629
6160 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6161 33 2.99121 3.65163 0.11040 3.56302 33 - -
6162 1.38629 1.38629 1.38629 1.38629
6163 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6164 34 0.13381 3.44360 2.84291 3.35134 34 - -
6165 1.38629 1.38629 1.38629 1.38629
6166 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6167 35 0.13381 3.44360 2.84291 3.35134 35 - -
6168 1.38629 1.38629 1.38629 1.38629
6169 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6170 36 3.50594 0.12185 3.55225 2.88172 36 - -
6171 1.38629 1.38629 1.38629 1.38629
6172 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6173 37 3.15301 2.63604 3.19868 0.16864 37 - -
6174 1.38629 1.38629 1.38629 1.38629
6175 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6176 38 3.15301 2.63604 3.19868 0.16864 38 - -
6177 1.38629 1.38629 1.38629 1.38629
6178 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6179 39 0.13381 3.44360 2.84291 3.35134 39 - -
6180 1.38629 1.38629 1.38629 1.38629
6181 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6182 40 0.13381 3.44360 2.84291 3.35134 40 - -
6183 1.38629 1.38629 1.38629 1.38629
6184 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6185 41 2.99121 3.65163 0.11040 3.56302 41 - -
6186 1.38629 1.38629 1.38629 1.38629
6187 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6188 42 3.50594 0.12185 3.55225 2.88172 42 - -
6189 1.38629 1.38629 1.38629 1.38629
6190 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6191 43 0.13381 3.44360 2.84291 3.35134 43 - -
6192 1.38629 1.38629 1.38629 1.38629
6193 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6194 44 3.15301 2.63604 3.19868 0.16864 44 - -
6195 1.38629 1.38629 1.38629 1.38629
6196 0.03554 4.04784 4.04784 1.46634 0.26236 1.09861 0.40547
6197 45 0.13381 3.44360 2.84291 3.35134 45 - -
6198 1.38629 1.38629 1.38629 1.38629
6199 0.01793 4.03022 * 1.46634 0.26236 0.00000 *
6200 //
6201 HMMER3/b [3.0 | March 2010]
6202 NAME 4_LSU_Chlorophyta_4_LSU_start_onea_long
6203 LENG 45
6204 ALPH DNA
6205 RF no
6206 CS no
6207 MAP yes
6208 DATE Sat Jan 28 01:32:03 2012
6209 NSEQ 11
6210 EFFN 3.601318
6211 CKSUM 379381944
6212 STATS LOCAL MSV -7.4834 0.71933
6213 STATS LOCAL VITERBI -7.5869 0.71933
6214 STATS LOCAL FORWARD -3.9658 0.71933
6215 HMM A C G T
6216 m->m m->i m->d i->m i->i d->m d->d
6217 COMPO 1.30893 1.27801 1.46843 1.50954
6218 1.38629 1.38629 1.38629 1.38629
6219 0.03508 4.06067 4.06067 1.46634 0.26236 0.00000 *
6220 1 1.44401 2.22516 2.33571 0.58119 1 - -
6221 1.38629 1.38629 1.38629 1.38629
6222 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6223 2 3.17545 2.65027 3.22025 0.16529 2 - -
6224 1.38629 1.38629 1.38629 1.38629
6225 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6226 3 3.17545 2.65027 3.22025 0.16529 3 - -
6227 1.38629 1.38629 1.38629 1.38629
6228 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6229 4 3.53099 0.11912 3.57619 2.89972 4 - -
6230 1.38629 1.38629 1.38629 1.38629
6231 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6232 5 3.00607 3.67347 0.10820 3.58721 5 - -
6233 1.38629 1.38629 1.38629 1.38629
6234 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6235 6 0.13114 3.46546 2.85699 3.37531 6 - -
6236 1.38629 1.38629 1.38629 1.38629
6237 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6238 7 3.53099 0.11912 3.57619 2.89972 7 - -
6239 1.38629 1.38629 1.38629 1.38629
6240 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6241 8 3.53099 0.11912 3.57619 2.89972 8 - -
6242 1.38629 1.38629 1.38629 1.38629
6243 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6244 9 3.17545 2.65027 3.22025 0.16529 9 - -
6245 1.38629 1.38629 1.38629 1.38629
6246 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6247 10 3.00607 3.67347 0.10820 3.58721 10 - -
6248 1.38629 1.38629 1.38629 1.38629
6249 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6250 11 0.13114 3.46546 2.85699 3.37531 11 - -
6251 1.38629 1.38629 1.38629 1.38629
6252 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6253 12 3.00607 3.67347 0.10820 3.58721 12 - -
6254 1.38629 1.38629 1.38629 1.38629
6255 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6256 13 3.53099 0.11912 3.57619 2.89972 13 - -
6257 1.38629 1.38629 1.38629 1.38629
6258 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6259 14 3.17545 2.65027 3.22025 0.16529 14 - -
6260 1.38629 1.38629 1.38629 1.38629
6261 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6262 15 3.53099 0.11912 3.57619 2.89972 15 - -
6263 1.38629 1.38629 1.38629 1.38629
6264 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6265 16 0.13114 3.46546 2.85699 3.37531 16 - -
6266 1.38629 1.38629 1.38629 1.38629
6267 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6268 17 3.00607 3.67347 0.10820 3.58721 17 - -
6269 1.38629 1.38629 1.38629 1.38629
6270 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6271 18 3.00607 3.67347 0.10820 3.58721 18 - -
6272 1.38629 1.38629 1.38629 1.38629
6273 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6274 19 3.53099 0.11912 3.57619 2.89972 19 - -
6275 1.38629 1.38629 1.38629 1.38629
6276 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6277 20 0.13114 3.46546 2.85699 3.37531 20 - -
6278 1.38629 1.38629 1.38629 1.38629
6279 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6280 21 0.13114 3.46546 2.85699 3.37531 21 - -
6281 1.38629 1.38629 1.38629 1.38629
6282 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6283 22 3.00607 3.67347 0.10820 3.58721 22 - -
6284 1.38629 1.38629 1.38629 1.38629
6285 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6286 23 1.55854 2.81955 0.41310 2.68348 23 - -
6287 1.38629 1.38629 1.38629 1.38629
6288 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6289 24 2.52166 0.63298 2.59319 1.15872 24 - -
6290 1.38629 1.38629 1.38629 1.38629
6291 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6292 25 2.93139 2.09214 2.98594 0.25778 25 - -
6293 1.38629 1.38629 1.38629 1.38629
6294 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6295 26 0.13114 3.46546 2.85699 3.37531 26 - -
6296 1.38629 1.38629 1.38629 1.38629
6297 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6298 27 3.53099 0.11912 3.57619 2.89972 27 - -
6299 1.38629 1.38629 1.38629 1.38629
6300 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6301 28 3.53099 0.11912 3.57619 2.89972 28 - -
6302 1.38629 1.38629 1.38629 1.38629
6303 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6304 29 3.53099 0.11912 3.57619 2.89972 29 - -
6305 1.38629 1.38629 1.38629 1.38629
6306 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6307 30 3.00607 3.67347 0.10820 3.58721 30 - -
6308 1.38629 1.38629 1.38629 1.38629
6309 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6310 31 3.53099 0.11912 3.57619 2.89972 31 - -
6311 1.38629 1.38629 1.38629 1.38629
6312 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6313 32 3.17545 2.65027 3.22025 0.16529 32 - -
6314 1.38629 1.38629 1.38629 1.38629
6315 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6316 33 3.00607 3.67347 0.10820 3.58721 33 - -
6317 1.38629 1.38629 1.38629 1.38629
6318 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6319 34 0.13114 3.46546 2.85699 3.37531 34 - -
6320 1.38629 1.38629 1.38629 1.38629
6321 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6322 35 0.13114 3.46546 2.85699 3.37531 35 - -
6323 1.38629 1.38629 1.38629 1.38629
6324 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6325 36 3.53099 0.11912 3.57619 2.89972 36 - -
6326 1.38629 1.38629 1.38629 1.38629
6327 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6328 37 3.17545 2.65027 3.22025 0.16529 37 - -
6329 1.38629 1.38629 1.38629 1.38629
6330 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6331 38 3.17545 2.65027 3.22025 0.16529 38 - -
6332 1.38629 1.38629 1.38629 1.38629
6333 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6334 39 0.13114 3.46546 2.85699 3.37531 39 - -
6335 1.38629 1.38629 1.38629 1.38629
6336 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6337 40 0.13114 3.46546 2.85699 3.37531 40 - -
6338 1.38629 1.38629 1.38629 1.38629
6339 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6340 41 3.00607 3.67347 0.10820 3.58721 41 - -
6341 1.38629 1.38629 1.38629 1.38629
6342 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6343 42 3.53099 0.11912 3.57619 2.89972 42 - -
6344 1.38629 1.38629 1.38629 1.38629
6345 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6346 43 0.13114 3.46546 2.85699 3.37531 43 - -
6347 1.38629 1.38629 1.38629 1.38629
6348 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6349 44 3.17545 2.65027 3.22025 0.16529 44 - -
6350 1.38629 1.38629 1.38629 1.38629
6351 0.03508 4.06067 4.06067 1.46634 0.26236 1.09861 0.40547
6352 45 0.13114 3.46546 2.85699 3.37531 45 - -
6353 1.38629 1.38629 1.38629 1.38629
6354 0.01770 4.04328 * 1.46634 0.26236 0.00000 *
6355 //
6356 HMMER3/b [3.0 | March 2010]
6357 NAME 4_LSU_Chlorophyta_4_LSU_start_oneb_long
6358 LENG 45
6359 ALPH DNA
6360 RF no
6361 CS no
6362 MAP yes
6363 DATE Sat Jan 28 01:32:09 2012
6364 NSEQ 3
6365 EFFN 3.000000
6366 CKSUM 3141584239
6367 STATS LOCAL MSV -7.9640 0.72014
6368 STATS LOCAL VITERBI -7.7831 0.72014
6369 STATS LOCAL FORWARD -3.8589 0.72014
6370 HMM A C G T
6371 m->m m->i m->d i->m i->i d->m d->d
6372 COMPO 1.22757 1.15795 1.60695 1.64834
6373 1.38629 1.38629 1.38629 1.38629
6374 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
6375 1 2.97980 2.52563 3.03204 0.19727 1 - -
6376 1.38629 1.38629 1.38629 1.38629
6377 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6378 2 3.30705 0.14631 3.36166 2.73626 2 - -
6379 1.38629 1.38629 1.38629 1.38629
6380 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6381 3 2.97980 2.52563 3.03204 0.19727 3 - -
6382 1.38629 1.38629 1.38629 1.38629
6383 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6384 4 3.30705 0.14631 3.36166 2.73626 4 - -
6385 1.38629 1.38629 1.38629 1.38629
6386 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6387 5 2.86982 3.47591 0.13017 3.36931 5 - -
6388 1.38629 1.38629 1.38629 1.38629
6389 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6390 6 0.15719 3.27118 2.73043 3.16274 6 - -
6391 1.38629 1.38629 1.38629 1.38629
6392 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6393 7 3.30705 0.14631 3.36166 2.73626 7 - -
6394 1.38629 1.38629 1.38629 1.38629
6395 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6396 8 3.30705 0.14631 3.36166 2.73626 8 - -
6397 1.38629 1.38629 1.38629 1.38629
6398 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6399 9 2.97980 2.52563 3.03204 0.19727 9 - -
6400 1.38629 1.38629 1.38629 1.38629
6401 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6402 10 2.86982 3.47591 0.13017 3.36931 10 - -
6403 1.38629 1.38629 1.38629 1.38629
6404 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6405 11 0.15719 3.27118 2.73043 3.16274 11 - -
6406 1.38629 1.38629 1.38629 1.38629
6407 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6408 12 2.86982 3.47591 0.13017 3.36931 12 - -
6409 1.38629 1.38629 1.38629 1.38629
6410 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6411 13 3.30705 0.14631 3.36166 2.73626 13 - -
6412 1.38629 1.38629 1.38629 1.38629
6413 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6414 14 2.97980 2.52563 3.03204 0.19727 14 - -
6415 1.38629 1.38629 1.38629 1.38629
6416 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6417 15 3.30705 0.14631 3.36166 2.73626 15 - -
6418 1.38629 1.38629 1.38629 1.38629
6419 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6420 16 0.15719 3.27118 2.73043 3.16274 16 - -
6421 1.38629 1.38629 1.38629 1.38629
6422 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6423 17 0.15719 3.27118 2.73043 3.16274 17 - -
6424 1.38629 1.38629 1.38629 1.38629
6425 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6426 18 2.86982 3.47591 0.13017 3.36931 18 - -
6427 1.38629 1.38629 1.38629 1.38629
6428 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6429 19 3.30705 0.14631 3.36166 2.73626 19 - -
6430 1.38629 1.38629 1.38629 1.38629
6431 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6432 20 0.15719 3.27118 2.73043 3.16274 20 - -
6433 1.38629 1.38629 1.38629 1.38629
6434 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6435 21 0.15719 3.27118 2.73043 3.16274 21 - -
6436 1.38629 1.38629 1.38629 1.38629
6437 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6438 22 2.86982 3.47591 0.13017 3.36931 22 - -
6439 1.38629 1.38629 1.38629 1.38629
6440 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6441 23 0.15719 3.27118 2.73043 3.16274 23 - -
6442 1.38629 1.38629 1.38629 1.38629
6443 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6444 24 3.30705 0.14631 3.36166 2.73626 24 - -
6445 1.38629 1.38629 1.38629 1.38629
6446 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6447 25 3.30705 0.14631 3.36166 2.73626 25 - -
6448 1.38629 1.38629 1.38629 1.38629
6449 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6450 26 0.15719 3.27118 2.73043 3.16274 26 - -
6451 1.38629 1.38629 1.38629 1.38629
6452 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6453 27 3.30705 0.14631 3.36166 2.73626 27 - -
6454 1.38629 1.38629 1.38629 1.38629
6455 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6456 28 3.30705 0.14631 3.36166 2.73626 28 - -
6457 1.38629 1.38629 1.38629 1.38629
6458 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6459 29 3.30705 0.14631 3.36166 2.73626 29 - -
6460 1.38629 1.38629 1.38629 1.38629
6461 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6462 30 2.86982 3.47591 0.13017 3.36931 30 - -
6463 1.38629 1.38629 1.38629 1.38629
6464 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6465 31 3.30705 0.14631 3.36166 2.73626 31 - -
6466 1.38629 1.38629 1.38629 1.38629
6467 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6468 32 2.97980 2.52563 3.03204 0.19727 32 - -
6469 1.38629 1.38629 1.38629 1.38629
6470 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6471 33 2.86982 3.47591 0.13017 3.36931 33 - -
6472 1.38629 1.38629 1.38629 1.38629
6473 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6474 34 0.15719 3.27118 2.73043 3.16274 34 - -
6475 1.38629 1.38629 1.38629 1.38629
6476 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6477 35 0.15719 3.27118 2.73043 3.16274 35 - -
6478 1.38629 1.38629 1.38629 1.38629
6479 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6480 36 3.30705 0.14631 3.36166 2.73626 36 - -
6481 1.38629 1.38629 1.38629 1.38629
6482 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6483 37 2.97980 2.52563 3.03204 0.19727 37 - -
6484 1.38629 1.38629 1.38629 1.38629
6485 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6486 38 2.97980 2.52563 3.03204 0.19727 38 - -
6487 1.38629 1.38629 1.38629 1.38629
6488 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6489 39 0.15719 3.27118 2.73043 3.16274 39 - -
6490 1.38629 1.38629 1.38629 1.38629
6491 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6492 40 0.15719 3.27118 2.73043 3.16274 40 - -
6493 1.38629 1.38629 1.38629 1.38629
6494 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6495 41 2.86982 3.47591 0.13017 3.36931 41 - -
6496 1.38629 1.38629 1.38629 1.38629
6497 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6498 42 3.30705 0.14631 3.36166 2.73626 42 - -
6499 1.38629 1.38629 1.38629 1.38629
6500 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6501 43 0.15719 3.27118 2.73043 3.16274 43 - -
6502 1.38629 1.38629 1.38629 1.38629
6503 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6504 44 2.97980 2.52563 3.03204 0.19727 44 - -
6505 1.38629 1.38629 1.38629 1.38629
6506 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6507 45 0.15719 3.27118 2.73043 3.16274 45 - -
6508 1.38629 1.38629 1.38629 1.38629
6509 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
6510 //
6511 HMMER3/b [3.0 | March 2010]
6512 NAME 4_LSU_Chlorophyta_4_LSU_start_onec_long
6513 LENG 45
6514 ALPH DNA
6515 RF no
6516 CS no
6517 MAP yes
6518 DATE Sat Jan 28 01:32:18 2012
6519 NSEQ 6
6520 EFFN 3.307617
6521 CKSUM 3682386209
6522 STATS LOCAL MSV -8.0356 0.71933
6523 STATS LOCAL VITERBI -7.8157 0.71933
6524 STATS LOCAL FORWARD -4.1473 0.71933
6525 HMM A C G T
6526 m->m m->i m->d i->m i->i d->m d->d
6527 COMPO 1.27479 1.35672 1.37691 1.55755
6528 1.38629 1.38629 1.38629 1.38629
6529 0.03699 4.00872 4.00872 1.46634 0.26236 0.00000 *
6530 1 3.08373 2.59204 3.13207 0.17946 1 - -
6531 1.38629 1.38629 1.38629 1.38629
6532 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6533 2 3.08373 2.59204 3.13207 0.17946 2 - -
6534 1.38629 1.38629 1.38629 1.38629
6535 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6536 3 3.08373 2.59204 3.13207 0.17946 3 - -
6537 1.38629 1.38629 1.38629 1.38629
6538 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6539 4 3.42754 0.13087 3.47723 2.82494 4 - -
6540 1.38629 1.38629 1.38629 1.38629
6541 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6542 5 2.94415 3.58285 0.11770 3.48701 5 - -
6543 1.38629 1.38629 1.38629 1.38629
6544 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6545 6 0.14253 3.37543 2.79878 3.27663 6 - -
6546 1.38629 1.38629 1.38629 1.38629
6547 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6548 7 3.42754 0.13087 3.47723 2.82494 7 - -
6549 1.38629 1.38629 1.38629 1.38629
6550 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6551 8 3.42754 0.13087 3.47723 2.82494 8 - -
6552 1.38629 1.38629 1.38629 1.38629
6553 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6554 9 3.08373 2.59204 3.13207 0.17946 9 - -
6555 1.38629 1.38629 1.38629 1.38629
6556 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6557 10 2.94415 3.58285 0.11770 3.48701 10 - -
6558 1.38629 1.38629 1.38629 1.38629
6559 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6560 11 0.14253 3.37543 2.79878 3.27663 11 - -
6561 1.38629 1.38629 1.38629 1.38629
6562 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6563 12 2.94415 3.58285 0.11770 3.48701 12 - -
6564 1.38629 1.38629 1.38629 1.38629
6565 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6566 13 3.42754 0.13087 3.47723 2.82494 13 - -
6567 1.38629 1.38629 1.38629 1.38629
6568 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6569 14 3.08373 2.59204 3.13207 0.17946 14 - -
6570 1.38629 1.38629 1.38629 1.38629
6571 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6572 15 3.42754 0.13087 3.47723 2.82494 15 - -
6573 1.38629 1.38629 1.38629 1.38629
6574 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6575 16 0.14253 3.37543 2.79878 3.27663 16 - -
6576 1.38629 1.38629 1.38629 1.38629
6577 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6578 17 2.94415 3.58285 0.11770 3.48701 17 - -
6579 1.38629 1.38629 1.38629 1.38629
6580 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6581 18 2.94415 3.58285 0.11770 3.48701 18 - -
6582 1.38629 1.38629 1.38629 1.38629
6583 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6584 19 2.94415 3.58285 0.11770 3.48701 19 - -
6585 1.38629 1.38629 1.38629 1.38629
6586 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6587 20 2.94415 3.58285 0.11770 3.48701 20 - -
6588 1.38629 1.38629 1.38629 1.38629
6589 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6590 21 0.14253 3.37543 2.79878 3.27663 21 - -
6591 1.38629 1.38629 1.38629 1.38629
6592 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6593 22 2.94415 3.58285 0.11770 3.48701 22 - -
6594 1.38629 1.38629 1.38629 1.38629
6595 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6596 23 0.14253 3.37543 2.79878 3.27663 23 - -
6597 1.38629 1.38629 1.38629 1.38629
6598 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6599 24 0.14253 3.37543 2.79878 3.27663 24 - -
6600 1.38629 1.38629 1.38629 1.38629
6601 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6602 25 3.42754 0.13087 3.47723 2.82494 25 - -
6603 1.38629 1.38629 1.38629 1.38629
6604 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6605 26 0.14253 3.37543 2.79878 3.27663 26 - -
6606 1.38629 1.38629 1.38629 1.38629
6607 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6608 27 3.42754 0.13087 3.47723 2.82494 27 - -
6609 1.38629 1.38629 1.38629 1.38629
6610 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6611 28 3.42754 0.13087 3.47723 2.82494 28 - -
6612 1.38629 1.38629 1.38629 1.38629
6613 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6614 29 3.42754 0.13087 3.47723 2.82494 29 - -
6615 1.38629 1.38629 1.38629 1.38629
6616 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6617 30 2.94415 3.58285 0.11770 3.48701 30 - -
6618 1.38629 1.38629 1.38629 1.38629
6619 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6620 31 2.49371 0.60220 2.56569 1.22784 31 - -
6621 1.38629 1.38629 1.38629 1.38629
6622 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6623 32 3.08373 2.59204 3.13207 0.17946 32 - -
6624 1.38629 1.38629 1.38629 1.38629
6625 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6626 33 2.94415 3.58285 0.11770 3.48701 33 - -
6627 1.38629 1.38629 1.38629 1.38629
6628 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6629 34 0.14253 3.37543 2.79878 3.27663 34 - -
6630 1.38629 1.38629 1.38629 1.38629
6631 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6632 35 0.14253 3.37543 2.79878 3.27663 35 - -
6633 1.38629 1.38629 1.38629 1.38629
6634 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6635 36 3.42754 0.13087 3.47723 2.82494 36 - -
6636 1.38629 1.38629 1.38629 1.38629
6637 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6638 37 3.08373 2.59204 3.13207 0.17946 37 - -
6639 1.38629 1.38629 1.38629 1.38629
6640 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6641 38 3.08373 2.59204 3.13207 0.17946 38 - -
6642 1.38629 1.38629 1.38629 1.38629
6643 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6644 39 0.14253 3.37543 2.79878 3.27663 39 - -
6645 1.38629 1.38629 1.38629 1.38629
6646 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6647 40 0.14253 3.37543 2.79878 3.27663 40 - -
6648 1.38629 1.38629 1.38629 1.38629
6649 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6650 41 2.94415 3.58285 0.11770 3.48701 41 - -
6651 1.38629 1.38629 1.38629 1.38629
6652 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6653 42 3.42754 0.13087 3.47723 2.82494 42 - -
6654 1.38629 1.38629 1.38629 1.38629
6655 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6656 43 0.14253 3.37543 2.79878 3.27663 43 - -
6657 1.38629 1.38629 1.38629 1.38629
6658 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6659 44 3.08373 2.59204 3.13207 0.17946 44 - -
6660 1.38629 1.38629 1.38629 1.38629
6661 0.03699 4.00872 4.00872 1.46634 0.26236 1.09861 0.40547
6662 45 0.14253 3.37543 2.79878 3.27663 45 - -
6663 1.38629 1.38629 1.38629 1.38629
6664 0.01867 3.99039 * 1.46634 0.26236 0.00000 *
6665 //
6666 HMMER3/b [3.0 | March 2010]
6667 NAME 4_LSU_Chlorophyta_4_LSU_start_oned_long
6668 LENG 45
6669 ALPH DNA
6670 RF no
6671 CS no
6672 MAP yes
6673 DATE Sat Jan 28 01:32:27 2012
6674 NSEQ 3
6675 EFFN 3.000000
6676 CKSUM 3310277996
6677 STATS LOCAL MSV -8.0340 0.72071
6678 STATS LOCAL VITERBI -7.7803 0.72071
6679 STATS LOCAL FORWARD -3.9164 0.72071
6680 HMM A C G T
6681 m->m m->i m->d i->m i->i d->m d->d
6682 COMPO 1.21928 1.29810 1.50316 1.56504
6683 1.38629 1.38629 1.38629 1.38629
6684 0.03922 3.95124 3.95124 1.46634 0.26236 0.00000 *
6685 1 2.97980 2.52563 3.03204 0.19727 1 - -
6686 1.38629 1.38629 1.38629 1.38629
6687 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6688 2 2.97980 2.52563 3.03204 0.19727 2 - -
6689 1.38629 1.38629 1.38629 1.38629
6690 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6691 3 2.97980 2.52563 3.03204 0.19727 3 - -
6692 1.38629 1.38629 1.38629 1.38629
6693 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6694 4 3.30705 0.14631 3.36166 2.73626 4 - -
6695 1.38629 1.38629 1.38629 1.38629
6696 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6697 5 2.86982 3.47591 0.13017 3.36931 5 - -
6698 1.38629 1.38629 1.38629 1.38629
6699 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6700 6 0.15719 3.27118 2.73043 3.16274 6 - -
6701 1.38629 1.38629 1.38629 1.38629
6702 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6703 7 3.30705 0.14631 3.36166 2.73626 7 - -
6704 1.38629 1.38629 1.38629 1.38629
6705 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6706 8 3.30705 0.14631 3.36166 2.73626 8 - -
6707 1.38629 1.38629 1.38629 1.38629
6708 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6709 9 2.97980 2.52563 3.03204 0.19727 9 - -
6710 1.38629 1.38629 1.38629 1.38629
6711 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6712 10 2.86982 3.47591 0.13017 3.36931 10 - -
6713 1.38629 1.38629 1.38629 1.38629
6714 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6715 11 0.15719 3.27118 2.73043 3.16274 11 - -
6716 1.38629 1.38629 1.38629 1.38629
6717 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6718 12 2.86982 3.47591 0.13017 3.36931 12 - -
6719 1.38629 1.38629 1.38629 1.38629
6720 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6721 13 2.10839 0.71588 1.38236 1.97456 13 - -
6722 1.38629 1.38629 1.38629 1.38629
6723 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6724 14 2.97980 2.52563 3.03204 0.19727 14 - -
6725 1.38629 1.38629 1.38629 1.38629
6726 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6727 15 3.30705 0.14631 3.36166 2.73626 15 - -
6728 1.38629 1.38629 1.38629 1.38629
6729 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6730 16 0.15719 3.27118 2.73043 3.16274 16 - -
6731 1.38629 1.38629 1.38629 1.38629
6732 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6733 17 2.86982 3.47591 0.13017 3.36931 17 - -
6734 1.38629 1.38629 1.38629 1.38629
6735 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6736 18 2.86982 3.47591 0.13017 3.36931 18 - -
6737 1.38629 1.38629 1.38629 1.38629
6738 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6739 19 3.30705 0.14631 3.36166 2.73626 19 - -
6740 1.38629 1.38629 1.38629 1.38629
6741 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6742 20 0.15719 3.27118 2.73043 3.16274 20 - -
6743 1.38629 1.38629 1.38629 1.38629
6744 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6745 21 0.15719 3.27118 2.73043 3.16274 21 - -
6746 1.38629 1.38629 1.38629 1.38629
6747 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6748 22 2.86982 3.47591 0.13017 3.36931 22 - -
6749 1.38629 1.38629 1.38629 1.38629
6750 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6751 23 0.15719 3.27118 2.73043 3.16274 23 - -
6752 1.38629 1.38629 1.38629 1.38629
6753 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6754 24 0.15719 3.27118 2.73043 3.16274 24 - -
6755 1.38629 1.38629 1.38629 1.38629
6756 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6757 25 3.30705 0.14631 3.36166 2.73626 25 - -
6758 1.38629 1.38629 1.38629 1.38629
6759 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6760 26 0.15719 3.27118 2.73043 3.16274 26 - -
6761 1.38629 1.38629 1.38629 1.38629
6762 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6763 27 3.30705 0.14631 3.36166 2.73626 27 - -
6764 1.38629 1.38629 1.38629 1.38629
6765 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6766 28 3.30705 0.14631 3.36166 2.73626 28 - -
6767 1.38629 1.38629 1.38629 1.38629
6768 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6769 29 3.30705 0.14631 3.36166 2.73626 29 - -
6770 1.38629 1.38629 1.38629 1.38629
6771 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6772 30 2.86982 3.47591 0.13017 3.36931 30 - -
6773 1.38629 1.38629 1.38629 1.38629
6774 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6775 31 3.30705 0.14631 3.36166 2.73626 31 - -
6776 1.38629 1.38629 1.38629 1.38629
6777 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6778 32 2.97980 2.52563 3.03204 0.19727 32 - -
6779 1.38629 1.38629 1.38629 1.38629
6780 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6781 33 2.86982 3.47591 0.13017 3.36931 33 - -
6782 1.38629 1.38629 1.38629 1.38629
6783 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6784 34 0.15719 3.27118 2.73043 3.16274 34 - -
6785 1.38629 1.38629 1.38629 1.38629
6786 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6787 35 0.15719 3.27118 2.73043 3.16274 35 - -
6788 1.38629 1.38629 1.38629 1.38629
6789 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6790 36 3.30705 0.14631 3.36166 2.73626 36 - -
6791 1.38629 1.38629 1.38629 1.38629
6792 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6793 37 2.97980 2.52563 3.03204 0.19727 37 - -
6794 1.38629 1.38629 1.38629 1.38629
6795 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6796 38 2.97980 2.52563 3.03204 0.19727 38 - -
6797 1.38629 1.38629 1.38629 1.38629
6798 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6799 39 0.15719 3.27118 2.73043 3.16274 39 - -
6800 1.38629 1.38629 1.38629 1.38629
6801 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6802 40 0.15719 3.27118 2.73043 3.16274 40 - -
6803 1.38629 1.38629 1.38629 1.38629
6804 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6805 41 2.86982 3.47591 0.13017 3.36931 41 - -
6806 1.38629 1.38629 1.38629 1.38629
6807 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6808 42 3.30705 0.14631 3.36166 2.73626 42 - -
6809 1.38629 1.38629 1.38629 1.38629
6810 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6811 43 0.15719 3.27118 2.73043 3.16274 43 - -
6812 1.38629 1.38629 1.38629 1.38629
6813 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6814 44 2.97980 2.52563 3.03204 0.19727 44 - -
6815 1.38629 1.38629 1.38629 1.38629
6816 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547
6817 45 0.15719 3.27118 2.73043 3.16274 45 - -
6818 1.38629 1.38629 1.38629 1.38629
6819 0.01980 3.93183 * 1.46634 0.26236 0.00000 *
6820 //
6821 HMMER3/b [3.0 | March 2010]
6822 NAME 4_LSU_Chlorophyta_4_LSU_start_three_long
6823 LENG 45
6824 ALPH DNA
6825 RF no
6826 CS no
6827 MAP yes
6828 DATE Sat Jan 28 01:33:03 2012
6829 NSEQ 11
6830 EFFN 3.397217
6831 CKSUM 3928018479
6832 STATS LOCAL MSV -7.3779 0.71931
6833 STATS LOCAL VITERBI -7.7033 0.71931
6834 STATS LOCAL FORWARD -4.2315 0.71931
6835 HMM A C G T
6836 m->m m->i m->d i->m i->i d->m d->d
6837 COMPO 1.32042 1.51402 1.30568 1.41895
6838 1.38629 1.38629 1.38629 1.38629
6839 0.03639 4.02485 4.02485 1.46634 0.26236 0.00000 *
6840 1 1.38134 1.08048 2.05996 1.26632 1 - -
6841 1.38629 1.38629 1.38629 1.38629
6842 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6843 2 3.11246 2.61030 3.15970 0.17488 2 - -
6844 1.38629 1.38629 1.38629 1.38629
6845 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6846 3 3.11246 2.61030 3.15970 0.17488 3 - -
6847 1.38629 1.38629 1.38629 1.38629
6848 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6849 4 3.11246 2.61030 3.15970 0.17488 4 - -
6850 1.38629 1.38629 1.38629 1.38629
6851 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6852 5 2.96390 3.61162 0.11458 3.51878 5 - -
6853 1.38629 1.38629 1.38629 1.38629
6854 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6855 6 0.13882 3.40383 2.81721 3.30774 6 - -
6856 1.38629 1.38629 1.38629 1.38629
6857 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6858 7 3.46025 0.12702 3.50855 2.84871 7 - -
6859 1.38629 1.38629 1.38629 1.38629
6860 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6861 8 2.96390 3.61162 0.11458 3.51878 8 - -
6862 1.38629 1.38629 1.38629 1.38629
6863 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6864 9 0.13882 3.40383 2.81721 3.30774 9 - -
6865 1.38629 1.38629 1.38629 1.38629
6866 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6867 10 3.11246 2.61030 3.15970 0.17488 10 - -
6868 1.38629 1.38629 1.38629 1.38629
6869 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6870 11 2.96390 3.61162 0.11458 3.51878 11 - -
6871 1.38629 1.38629 1.38629 1.38629
6872 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6873 12 3.11246 2.61030 3.15970 0.17488 12 - -
6874 1.38629 1.38629 1.38629 1.38629
6875 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6876 13 3.11246 2.61030 3.15970 0.17488 13 - -
6877 1.38629 1.38629 1.38629 1.38629
6878 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6879 14 2.96390 3.61162 0.11458 3.51878 14 - -
6880 1.38629 1.38629 1.38629 1.38629
6881 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6882 15 3.11246 2.61030 3.15970 0.17488 15 - -
6883 1.38629 1.38629 1.38629 1.38629
6884 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6885 16 3.46025 0.12702 3.50855 2.84871 16 - -
6886 1.38629 1.38629 1.38629 1.38629
6887 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6888 17 2.96390 3.61162 0.11458 3.51878 17 - -
6889 1.38629 1.38629 1.38629 1.38629
6890 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6891 18 2.96390 3.61162 0.11458 3.51878 18 - -
6892 1.38629 1.38629 1.38629 1.38629
6893 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6894 19 3.46025 0.12702 3.50855 2.84871 19 - -
6895 1.38629 1.38629 1.38629 1.38629
6896 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6897 20 2.96390 3.61162 0.11458 3.51878 20 - -
6898 1.38629 1.38629 1.38629 1.38629
6899 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6900 21 0.13882 3.40383 2.81721 3.30774 21 - -
6901 1.38629 1.38629 1.38629 1.38629
6902 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6903 22 2.96390 3.61162 0.11458 3.51878 22 - -
6904 1.38629 1.38629 1.38629 1.38629
6905 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6906 23 2.96390 3.61162 0.11458 3.51878 23 - -
6907 1.38629 1.38629 1.38629 1.38629
6908 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6909 24 0.13882 3.40383 2.81721 3.30774 24 - -
6910 1.38629 1.38629 1.38629 1.38629
6911 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6912 25 0.13882 3.40383 2.81721 3.30774 25 - -
6913 1.38629 1.38629 1.38629 1.38629
6914 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6915 26 0.13882 3.40383 2.81721 3.30774 26 - -
6916 1.38629 1.38629 1.38629 1.38629
6917 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6918 27 3.46025 0.12702 3.50855 2.84871 27 - -
6919 1.38629 1.38629 1.38629 1.38629
6920 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6921 28 3.46025 0.12702 3.50855 2.84871 28 - -
6922 1.38629 1.38629 1.38629 1.38629
6923 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6924 29 3.46025 0.12702 3.50855 2.84871 29 - -
6925 1.38629 1.38629 1.38629 1.38629
6926 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6927 30 2.96390 3.61162 0.11458 3.51878 30 - -
6928 1.38629 1.38629 1.38629 1.38629
6929 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6930 31 3.46025 0.12702 3.50855 2.84871 31 - -
6931 1.38629 1.38629 1.38629 1.38629
6932 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6933 32 3.11246 2.61030 3.15970 0.17488 32 - -
6934 1.38629 1.38629 1.38629 1.38629
6935 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6936 33 2.96390 3.61162 0.11458 3.51878 33 - -
6937 1.38629 1.38629 1.38629 1.38629
6938 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6939 34 0.13882 3.40383 2.81721 3.30774 34 - -
6940 1.38629 1.38629 1.38629 1.38629
6941 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6942 35 0.13882 3.40383 2.81721 3.30774 35 - -
6943 1.38629 1.38629 1.38629 1.38629
6944 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6945 36 3.46025 0.12702 3.50855 2.84871 36 - -
6946 1.38629 1.38629 1.38629 1.38629
6947 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6948 37 3.11246 2.61030 3.15970 0.17488 37 - -
6949 1.38629 1.38629 1.38629 1.38629
6950 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6951 38 3.11246 2.61030 3.15970 0.17488 38 - -
6952 1.38629 1.38629 1.38629 1.38629
6953 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6954 39 0.13882 3.40383 2.81721 3.30774 39 - -
6955 1.38629 1.38629 1.38629 1.38629
6956 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6957 40 0.13882 3.40383 2.81721 3.30774 40 - -
6958 1.38629 1.38629 1.38629 1.38629
6959 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6960 41 2.96390 3.61162 0.11458 3.51878 41 - -
6961 1.38629 1.38629 1.38629 1.38629
6962 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6963 42 3.46025 0.12702 3.50855 2.84871 42 - -
6964 1.38629 1.38629 1.38629 1.38629
6965 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6966 43 0.13882 3.40383 2.81721 3.30774 43 - -
6967 1.38629 1.38629 1.38629 1.38629
6968 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6969 44 3.11246 2.61030 3.15970 0.17488 44 - -
6970 1.38629 1.38629 1.38629 1.38629
6971 0.03639 4.02485 4.02485 1.46634 0.26236 1.09861 0.40547
6972 45 0.13882 3.40383 2.81721 3.30774 45 - -
6973 1.38629 1.38629 1.38629 1.38629
6974 0.01836 4.00683 * 1.46634 0.26236 0.00000 *
6975 //
6976 HMMER3/b [3.0 | March 2010]
6977 NAME 4_LSU_Chlorophyta_4_LSU_start_twoa_long
6978 LENG 45
6979 ALPH DNA
6980 RF no
6981 CS no
6982 MAP yes
6983 DATE Sat Jan 28 01:32:44 2012
6984 NSEQ 4
6985 EFFN 3.238281
6986 CKSUM 4153052600
6987 STATS LOCAL MSV -8.0299 0.71931
6988 STATS LOCAL VITERBI -7.6112 0.71931
6989 STATS LOCAL FORWARD -4.0920 0.71931
6990 HMM A C G T
6991 m->m m->i m->d i->m i->i d->m d->d
6992 COMPO 1.33774 1.39206 1.38059 1.43731
6993 1.38629 1.38629 1.38629 1.38629
6994 0.03747 3.99605 3.99605 1.46634 0.26236 0.00000 *
6995 1 0.14557 3.35286 2.78409 3.25194 1 - -
6996 1.38629 1.38629 1.38629 1.38629
6997 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
6998 2 3.06103 2.57758 3.11024 0.18319 2 - -
6999 1.38629 1.38629 1.38629 1.38629
7000 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7001 3 3.06103 2.57758 3.11024 0.18319 3 - -
7002 1.38629 1.38629 1.38629 1.38629
7003 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7004 4 3.40150 0.13404 3.45229 2.80593 4 - -
7005 1.38629 1.38629 1.38629 1.38629
7006 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7007 5 2.92831 3.55987 0.12026 3.46167 5 - -
7008 1.38629 1.38629 1.38629 1.38629
7009 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7010 6 0.14557 3.35286 2.78409 3.25194 6 - -
7011 1.38629 1.38629 1.38629 1.38629
7012 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7013 7 3.40150 0.13404 3.45229 2.80593 7 - -
7014 1.38629 1.38629 1.38629 1.38629
7015 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7016 8 3.40150 0.13404 3.45229 2.80593 8 - -
7017 1.38629 1.38629 1.38629 1.38629
7018 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7019 9 3.06103 2.57758 3.11024 0.18319 9 - -
7020 1.38629 1.38629 1.38629 1.38629
7021 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7022 10 2.92831 3.55987 0.12026 3.46167 10 - -
7023 1.38629 1.38629 1.38629 1.38629
7024 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7025 11 0.14557 3.35286 2.78409 3.25194 11 - -
7026 1.38629 1.38629 1.38629 1.38629
7027 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7028 12 2.92831 3.55987 0.12026 3.46167 12 - -
7029 1.38629 1.38629 1.38629 1.38629
7030 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7031 13 3.06103 2.57758 3.11024 0.18319 13 - -
7032 1.38629 1.38629 1.38629 1.38629
7033 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7034 14 3.06103 2.57758 3.11024 0.18319 14 - -
7035 1.38629 1.38629 1.38629 1.38629
7036 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7037 15 3.40150 0.13404 3.45229 2.80593 15 - -
7038 1.38629 1.38629 1.38629 1.38629
7039 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7040 16 0.14557 3.35286 2.78409 3.25194 16 - -
7041 1.38629 1.38629 1.38629 1.38629
7042 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7043 17 2.92831 3.55987 0.12026 3.46167 17 - -
7044 1.38629 1.38629 1.38629 1.38629
7045 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7046 18 2.92831 3.55987 0.12026 3.46167 18 - -
7047 1.38629 1.38629 1.38629 1.38629
7048 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7049 19 3.06103 2.57758 3.11024 0.18319 19 - -
7050 1.38629 1.38629 1.38629 1.38629
7051 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7052 20 2.92831 3.55987 0.12026 3.46167 20 - -
7053 1.38629 1.38629 1.38629 1.38629
7054 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7055 21 0.14557 3.35286 2.78409 3.25194 21 - -
7056 1.38629 1.38629 1.38629 1.38629
7057 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7058 22 2.92831 3.55987 0.12026 3.46167 22 - -
7059 1.38629 1.38629 1.38629 1.38629
7060 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7061 23 2.92831 3.55987 0.12026 3.46167 23 - -
7062 1.38629 1.38629 1.38629 1.38629
7063 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7064 24 3.40150 0.13404 3.45229 2.80593 24 - -
7065 1.38629 1.38629 1.38629 1.38629
7066 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7067 25 3.06103 2.57758 3.11024 0.18319 25 - -
7068 1.38629 1.38629 1.38629 1.38629
7069 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7070 26 0.14557 3.35286 2.78409 3.25194 26 - -
7071 1.38629 1.38629 1.38629 1.38629
7072 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7073 27 3.40150 0.13404 3.45229 2.80593 27 - -
7074 1.38629 1.38629 1.38629 1.38629
7075 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7076 28 3.40150 0.13404 3.45229 2.80593 28 - -
7077 1.38629 1.38629 1.38629 1.38629
7078 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7079 29 3.40150 0.13404 3.45229 2.80593 29 - -
7080 1.38629 1.38629 1.38629 1.38629
7081 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7082 30 2.92831 3.55987 0.12026 3.46167 30 - -
7083 1.38629 1.38629 1.38629 1.38629
7084 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7085 31 3.40150 0.13404 3.45229 2.80593 31 - -
7086 1.38629 1.38629 1.38629 1.38629
7087 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7088 32 3.06103 2.57758 3.11024 0.18319 32 - -
7089 1.38629 1.38629 1.38629 1.38629
7090 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7091 33 2.92831 3.55987 0.12026 3.46167 33 - -
7092 1.38629 1.38629 1.38629 1.38629
7093 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7094 34 0.14557 3.35286 2.78409 3.25194 34 - -
7095 1.38629 1.38629 1.38629 1.38629
7096 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7097 35 0.14557 3.35286 2.78409 3.25194 35 - -
7098 1.38629 1.38629 1.38629 1.38629
7099 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7100 36 3.40150 0.13404 3.45229 2.80593 36 - -
7101 1.38629 1.38629 1.38629 1.38629
7102 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7103 37 3.06103 2.57758 3.11024 0.18319 37 - -
7104 1.38629 1.38629 1.38629 1.38629
7105 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7106 38 3.06103 2.57758 3.11024 0.18319 38 - -
7107 1.38629 1.38629 1.38629 1.38629
7108 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7109 39 0.14557 3.35286 2.78409 3.25194 39 - -
7110 1.38629 1.38629 1.38629 1.38629
7111 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7112 40 0.14557 3.35286 2.78409 3.25194 40 - -
7113 1.38629 1.38629 1.38629 1.38629
7114 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7115 41 2.92831 3.55987 0.12026 3.46167 41 - -
7116 1.38629 1.38629 1.38629 1.38629
7117 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7118 42 3.40150 0.13404 3.45229 2.80593 42 - -
7119 1.38629 1.38629 1.38629 1.38629
7120 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7121 43 0.14557 3.35286 2.78409 3.25194 43 - -
7122 1.38629 1.38629 1.38629 1.38629
7123 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7124 44 3.06103 2.57758 3.11024 0.18319 44 - -
7125 1.38629 1.38629 1.38629 1.38629
7126 0.03747 3.99605 3.99605 1.46634 0.26236 1.09861 0.40547
7127 45 0.14557 3.35286 2.78409 3.25194 45 - -
7128 1.38629 1.38629 1.38629 1.38629
7129 0.01891 3.97749 * 1.46634 0.26236 0.00000 *
7130 //
7131 HMMER3/b [3.0 | March 2010]
7132 NAME 4_LSU_Chlorophyta_4_LSU_start_twob_long
7133 LENG 45
7134 ALPH DNA
7135 RF no
7136 CS no
7137 MAP yes
7138 DATE Sat Jan 28 01:32:51 2012
7139 NSEQ 2
7140 EFFN 2.000000
7141 CKSUM 1487093802
7142 STATS LOCAL MSV -7.3807 0.72793
7143 STATS LOCAL VITERBI -8.0673 0.72793
7144 STATS LOCAL FORWARD -3.4730 0.72793
7145 HMM A C G T
7146 m->m m->i m->d i->m i->i d->m d->d
7147 COMPO 1.28936 1.34641 1.43436 1.48672
7148 1.38629 1.38629 1.38629 1.38629
7149 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
7150 1 0.23862 2.84929 2.43386 2.70756 1 - -
7151 1.38629 1.38629 1.38629 1.38629
7152 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7153 2 2.57915 2.25909 2.64442 0.28946 2 - -
7154 1.38629 1.38629 1.38629 1.38629
7155 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7156 3 2.81865 0.23582 2.88868 2.35662 3 - -
7157 1.38629 1.38629 1.38629 1.38629
7158 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7159 4 2.57915 2.25909 2.64442 0.28946 4 - -
7160 1.38629 1.38629 1.38629 1.38629
7161 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7162 5 2.53331 3.02441 0.20344 2.88069 5 - -
7163 1.38629 1.38629 1.38629 1.38629
7164 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7165 6 2.53331 3.02441 0.20344 2.88069 6 - -
7166 1.38629 1.38629 1.38629 1.38629
7167 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7168 7 2.81865 0.23582 2.88868 2.35662 7 - -
7169 1.38629 1.38629 1.38629 1.38629
7170 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7171 8 2.81865 0.23582 2.88868 2.35662 8 - -
7172 1.38629 1.38629 1.38629 1.38629
7173 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7174 9 2.57915 2.25909 2.64442 0.28946 9 - -
7175 1.38629 1.38629 1.38629 1.38629
7176 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7177 10 2.81865 0.23582 2.88868 2.35662 10 - -
7178 1.38629 1.38629 1.38629 1.38629
7179 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7180 11 0.23862 2.84929 2.43386 2.70756 11 - -
7181 1.38629 1.38629 1.38629 1.38629
7182 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7183 12 0.23862 2.84929 2.43386 2.70756 12 - -
7184 1.38629 1.38629 1.38629 1.38629
7185 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7186 13 0.23862 2.84929 2.43386 2.70756 13 - -
7187 1.38629 1.38629 1.38629 1.38629
7188 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7189 14 2.57915 2.25909 2.64442 0.28946 14 - -
7190 1.38629 1.38629 1.38629 1.38629
7191 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7192 15 2.81865 0.23582 2.88868 2.35662 15 - -
7193 1.38629 1.38629 1.38629 1.38629
7194 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7195 16 0.23862 2.84929 2.43386 2.70756 16 - -
7196 1.38629 1.38629 1.38629 1.38629
7197 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7198 17 2.53331 3.02441 0.20344 2.88069 17 - -
7199 1.38629 1.38629 1.38629 1.38629
7200 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7201 18 2.53331 3.02441 0.20344 2.88069 18 - -
7202 1.38629 1.38629 1.38629 1.38629
7203 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7204 19 2.57915 2.25909 2.64442 0.28946 19 - -
7205 1.38629 1.38629 1.38629 1.38629
7206 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7207 20 0.23862 2.84929 2.43386 2.70756 20 - -
7208 1.38629 1.38629 1.38629 1.38629
7209 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7210 21 2.53331 3.02441 0.20344 2.88069 21 - -
7211 1.38629 1.38629 1.38629 1.38629
7212 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7213 22 2.53331 3.02441 0.20344 2.88069 22 - -
7214 1.38629 1.38629 1.38629 1.38629
7215 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7216 23 2.53331 3.02441 0.20344 2.88069 23 - -
7217 1.38629 1.38629 1.38629 1.38629
7218 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7219 24 2.81865 0.23582 2.88868 2.35662 24 - -
7220 1.38629 1.38629 1.38629 1.38629
7221 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7222 25 2.57915 2.25909 2.64442 0.28946 25 - -
7223 1.38629 1.38629 1.38629 1.38629
7224 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7225 26 0.23862 2.84929 2.43386 2.70756 26 - -
7226 1.38629 1.38629 1.38629 1.38629
7227 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7228 27 2.81865 0.23582 2.88868 2.35662 27 - -
7229 1.38629 1.38629 1.38629 1.38629
7230 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7231 28 2.81865 0.23582 2.88868 2.35662 28 - -
7232 1.38629 1.38629 1.38629 1.38629
7233 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7234 29 2.81865 0.23582 2.88868 2.35662 29 - -
7235 1.38629 1.38629 1.38629 1.38629
7236 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7237 30 2.53331 3.02441 0.20344 2.88069 30 - -
7238 1.38629 1.38629 1.38629 1.38629
7239 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7240 31 2.81865 0.23582 2.88868 2.35662 31 - -
7241 1.38629 1.38629 1.38629 1.38629
7242 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7243 32 2.57915 2.25909 2.64442 0.28946 32 - -
7244 1.38629 1.38629 1.38629 1.38629
7245 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7246 33 2.53331 3.02441 0.20344 2.88069 33 - -
7247 1.38629 1.38629 1.38629 1.38629
7248 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7249 34 0.23862 2.84929 2.43386 2.70756 34 - -
7250 1.38629 1.38629 1.38629 1.38629
7251 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7252 35 0.23862 2.84929 2.43386 2.70756 35 - -
7253 1.38629 1.38629 1.38629 1.38629
7254 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7255 36 2.81865 0.23582 2.88868 2.35662 36 - -
7256 1.38629 1.38629 1.38629 1.38629
7257 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7258 37 2.57915 2.25909 2.64442 0.28946 37 - -
7259 1.38629 1.38629 1.38629 1.38629
7260 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7261 38 2.57915 2.25909 2.64442 0.28946 38 - -
7262 1.38629 1.38629 1.38629 1.38629
7263 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7264 39 0.23862 2.84929 2.43386 2.70756 39 - -
7265 1.38629 1.38629 1.38629 1.38629
7266 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7267 40 0.23862 2.84929 2.43386 2.70756 40 - -
7268 1.38629 1.38629 1.38629 1.38629
7269 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7270 41 2.53331 3.02441 0.20344 2.88069 41 - -
7271 1.38629 1.38629 1.38629 1.38629
7272 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7273 42 2.81865 0.23582 2.88868 2.35662 42 - -
7274 1.38629 1.38629 1.38629 1.38629
7275 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7276 43 0.23862 2.84929 2.43386 2.70756 43 - -
7277 1.38629 1.38629 1.38629 1.38629
7278 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7279 44 2.57915 2.25909 2.64442 0.28946 44 - -
7280 1.38629 1.38629 1.38629 1.38629
7281 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7282 45 0.23862 2.84929 2.43386 2.70756 45 - -
7283 1.38629 1.38629 1.38629 1.38629
7284 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
7285 //
7286 HMMER3/b [3.0 | March 2010]
7287 NAME 1_SSU_Chlorophyta_1_SSU_end_five_long
7288 LENG 45
7289 ALPH DNA
7290 RF no
7291 CS no
7292 MAP yes
7293 DATE Wed Jan 25 23:25:17 2012
7294 NSEQ 7
7295 EFFN 3.264160
7296 CKSUM 2375868780
7297 STATS LOCAL MSV -8.0557 0.71932
7298 STATS LOCAL VITERBI -7.7021 0.71932
7299 STATS LOCAL FORWARD -4.0473 0.71932
7300 HMM A C G T
7301 m->m m->i m->d i->m i->i d->m d->d
7302 COMPO 1.21299 1.71353 1.30623 1.37981
7303 1.38629 1.38629 1.38629 1.38629
7304 0.03729 4.00080 4.00080 1.46634 0.26236 0.00000 *
7305 1 0.14442 3.36134 2.78962 3.26122 1 - -
7306 1.38629 1.38629 1.38629 1.38629
7307 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7308 2 2.93428 3.56852 0.11929 3.47120 2 - -
7309 1.38629 1.38629 1.38629 1.38629
7310 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7311 3 3.06955 2.58301 3.11843 0.18178 3 - -
7312 1.38629 1.38629 1.38629 1.38629
7313 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7314 4 3.41129 0.13284 3.46167 2.81309 4 - -
7315 1.38629 1.38629 1.38629 1.38629
7316 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7317 5 2.93428 3.56852 0.11929 3.47120 5 - -
7318 1.38629 1.38629 1.38629 1.38629
7319 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7320 6 3.06955 2.58301 3.11843 0.18178 6 - -
7321 1.38629 1.38629 1.38629 1.38629
7322 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7323 7 0.14442 3.36134 2.78962 3.26122 7 - -
7324 1.38629 1.38629 1.38629 1.38629
7325 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7326 8 0.14442 3.36134 2.78962 3.26122 8 - -
7327 1.38629 1.38629 1.38629 1.38629
7328 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7329 9 3.41129 0.13284 3.46167 2.81309 9 - -
7330 1.38629 1.38629 1.38629 1.38629
7331 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7332 10 0.14442 3.36134 2.78962 3.26122 10 - -
7333 1.38629 1.38629 1.38629 1.38629
7334 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7335 11 0.14442 3.36134 2.78962 3.26122 11 - -
7336 1.38629 1.38629 1.38629 1.38629
7337 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7338 12 2.93428 3.56852 0.11929 3.47120 12 - -
7339 1.38629 1.38629 1.38629 1.38629
7340 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7341 13 2.93428 3.56852 0.11929 3.47120 13 - -
7342 1.38629 1.38629 1.38629 1.38629
7343 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7344 14 3.06955 2.58301 3.11843 0.18178 14 - -
7345 1.38629 1.38629 1.38629 1.38629
7346 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7347 15 3.06955 2.58301 3.11843 0.18178 15 - -
7348 1.38629 1.38629 1.38629 1.38629
7349 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7350 16 3.06955 2.58301 3.11843 0.18178 16 - -
7351 1.38629 1.38629 1.38629 1.38629
7352 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7353 17 3.06955 2.58301 3.11843 0.18178 17 - -
7354 1.38629 1.38629 1.38629 1.38629
7355 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7356 18 3.41129 0.13284 3.46167 2.81309 18 - -
7357 1.38629 1.38629 1.38629 1.38629
7358 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7359 19 2.93428 3.56852 0.11929 3.47120 19 - -
7360 1.38629 1.38629 1.38629 1.38629
7361 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7362 20 3.06955 2.58301 3.11843 0.18178 20 - -
7363 1.38629 1.38629 1.38629 1.38629
7364 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7365 21 0.14442 3.36134 2.78962 3.26122 21 - -
7366 1.38629 1.38629 1.38629 1.38629
7367 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7368 22 2.93428 3.56852 0.11929 3.47120 22 - -
7369 1.38629 1.38629 1.38629 1.38629
7370 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7371 23 2.93428 3.56852 0.11929 3.47120 23 - -
7372 1.38629 1.38629 1.38629 1.38629
7373 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7374 24 3.06955 2.58301 3.11843 0.18178 24 - -
7375 1.38629 1.38629 1.38629 1.38629
7376 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7377 25 2.93428 3.56852 0.11929 3.47120 25 - -
7378 1.38629 1.38629 1.38629 1.38629
7379 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7380 26 0.14442 3.36134 2.78962 3.26122 26 - -
7381 1.38629 1.38629 1.38629 1.38629
7382 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7383 27 0.14442 3.36134 2.78962 3.26122 27 - -
7384 1.38629 1.38629 1.38629 1.38629
7385 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7386 28 3.41129 0.13284 3.46167 2.81309 28 - -
7387 1.38629 1.38629 1.38629 1.38629
7388 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7389 29 3.41129 0.13284 3.46167 2.81309 29 - -
7390 1.38629 1.38629 1.38629 1.38629
7391 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7392 30 3.06955 2.58301 3.11843 0.18178 30 - -
7393 1.38629 1.38629 1.38629 1.38629
7394 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7395 31 2.93428 3.56852 0.11929 3.47120 31 - -
7396 1.38629 1.38629 1.38629 1.38629
7397 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7398 32 3.41129 0.13284 3.46167 2.81309 32 - -
7399 1.38629 1.38629 1.38629 1.38629
7400 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7401 33 2.93428 3.56852 0.11929 3.47120 33 - -
7402 1.38629 1.38629 1.38629 1.38629
7403 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7404 34 0.14442 3.36134 2.78962 3.26122 34 - -
7405 1.38629 1.38629 1.38629 1.38629
7406 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7407 35 0.14442 3.36134 2.78962 3.26122 35 - -
7408 1.38629 1.38629 1.38629 1.38629
7409 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7410 36 0.14442 3.36134 2.78962 3.26122 36 - -
7411 1.38629 1.38629 1.38629 1.38629
7412 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7413 37 2.93428 3.56852 0.11929 3.47120 37 - -
7414 1.38629 1.38629 1.38629 1.38629
7415 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7416 38 2.93428 3.56852 0.11929 3.47120 38 - -
7417 1.38629 1.38629 1.38629 1.38629
7418 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7419 39 0.14442 3.36134 2.78962 3.26122 39 - -
7420 1.38629 1.38629 1.38629 1.38629
7421 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7422 40 3.06955 2.58301 3.11843 0.18178 40 - -
7423 1.38629 1.38629 1.38629 1.38629
7424 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7425 41 3.41129 0.13284 3.46167 2.81309 41 - -
7426 1.38629 1.38629 1.38629 1.38629
7427 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7428 42 0.14442 3.36134 2.78962 3.26122 42 - -
7429 1.38629 1.38629 1.38629 1.38629
7430 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7431 43 3.06955 2.58301 3.11843 0.18178 43 - -
7432 1.38629 1.38629 1.38629 1.38629
7433 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7434 44 3.06955 2.58301 3.11843 0.18178 44 - -
7435 1.38629 1.38629 1.38629 1.38629
7436 0.03729 4.00080 4.00080 1.46634 0.26236 1.09861 0.40547
7437 45 0.14442 3.36134 2.78962 3.26122 45 - -
7438 1.38629 1.38629 1.38629 1.38629
7439 0.01882 3.98232 * 1.46634 0.26236 0.00000 *
7440 //
7441 HMMER3/b [3.0 | March 2010]
7442 NAME 1_SSU_Chlorophyta_1_SSU_end_four_long
7443 LENG 45
7444 ALPH DNA
7445 RF no
7446 CS no
7447 MAP yes
7448 DATE Wed Jan 25 23:25:06 2012
7449 NSEQ 2
7450 EFFN 2.000000
7451 CKSUM 1482627613
7452 STATS LOCAL MSV -7.6096 0.72751
7453 STATS LOCAL VITERBI -8.2882 0.72751
7454 STATS LOCAL FORWARD -3.6834 0.72751
7455 HMM A C G T
7456 m->m m->i m->d i->m i->i d->m d->d
7457 COMPO 1.33866 1.47421 1.20851 1.55969
7458 1.38629 1.38629 1.38629 1.38629
7459 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
7460 1 0.23862 2.84929 2.43386 2.70756 1 - -
7461 1.38629 1.38629 1.38629 1.38629
7462 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7463 2 2.53331 3.02441 0.20344 2.88069 2 - -
7464 1.38629 1.38629 1.38629 1.38629
7465 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7466 3 2.57915 2.25909 2.64442 0.28946 3 - -
7467 1.38629 1.38629 1.38629 1.38629
7468 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7469 4 2.81865 0.23582 2.88868 2.35662 4 - -
7470 1.38629 1.38629 1.38629 1.38629
7471 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7472 5 2.53331 3.02441 0.20344 2.88069 5 - -
7473 1.38629 1.38629 1.38629 1.38629
7474 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7475 6 2.57915 2.25909 2.64442 0.28946 6 - -
7476 1.38629 1.38629 1.38629 1.38629
7477 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7478 7 0.23862 2.84929 2.43386 2.70756 7 - -
7479 1.38629 1.38629 1.38629 1.38629
7480 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7481 8 0.23862 2.84929 2.43386 2.70756 8 - -
7482 1.38629 1.38629 1.38629 1.38629
7483 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7484 9 2.81865 0.23582 2.88868 2.35662 9 - -
7485 1.38629 1.38629 1.38629 1.38629
7486 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7487 10 0.23862 2.84929 2.43386 2.70756 10 - -
7488 1.38629 1.38629 1.38629 1.38629
7489 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7490 11 0.23862 2.84929 2.43386 2.70756 11 - -
7491 1.38629 1.38629 1.38629 1.38629
7492 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7493 12 2.53331 3.02441 0.20344 2.88069 12 - -
7494 1.38629 1.38629 1.38629 1.38629
7495 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7496 13 2.53331 3.02441 0.20344 2.88069 13 - -
7497 1.38629 1.38629 1.38629 1.38629
7498 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7499 14 2.57915 2.25909 2.64442 0.28946 14 - -
7500 1.38629 1.38629 1.38629 1.38629
7501 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7502 15 2.81865 0.23582 2.88868 2.35662 15 - -
7503 1.38629 1.38629 1.38629 1.38629
7504 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7505 16 2.57915 2.25909 2.64442 0.28946 16 - -
7506 1.38629 1.38629 1.38629 1.38629
7507 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7508 17 2.81865 0.23582 2.88868 2.35662 17 - -
7509 1.38629 1.38629 1.38629 1.38629
7510 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7511 18 2.81865 0.23582 2.88868 2.35662 18 - -
7512 1.38629 1.38629 1.38629 1.38629
7513 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7514 19 2.53331 3.02441 0.20344 2.88069 19 - -
7515 1.38629 1.38629 1.38629 1.38629
7516 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7517 20 2.57915 2.25909 2.64442 0.28946 20 - -
7518 1.38629 1.38629 1.38629 1.38629
7519 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7520 21 0.23862 2.84929 2.43386 2.70756 21 - -
7521 1.38629 1.38629 1.38629 1.38629
7522 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7523 22 2.53331 3.02441 0.20344 2.88069 22 - -
7524 1.38629 1.38629 1.38629 1.38629
7525 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7526 23 2.53331 3.02441 0.20344 2.88069 23 - -
7527 1.38629 1.38629 1.38629 1.38629
7528 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7529 24 2.57915 2.25909 2.64442 0.28946 24 - -
7530 1.38629 1.38629 1.38629 1.38629
7531 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7532 25 2.53331 3.02441 0.20344 2.88069 25 - -
7533 1.38629 1.38629 1.38629 1.38629
7534 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7535 26 0.23862 2.84929 2.43386 2.70756 26 - -
7536 1.38629 1.38629 1.38629 1.38629
7537 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7538 27 0.23862 2.84929 2.43386 2.70756 27 - -
7539 1.38629 1.38629 1.38629 1.38629
7540 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7541 28 2.81865 0.23582 2.88868 2.35662 28 - -
7542 1.38629 1.38629 1.38629 1.38629
7543 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7544 29 2.81865 0.23582 2.88868 2.35662 29 - -
7545 1.38629 1.38629 1.38629 1.38629
7546 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7547 30 2.57915 2.25909 2.64442 0.28946 30 - -
7548 1.38629 1.38629 1.38629 1.38629
7549 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7550 31 2.53331 3.02441 0.20344 2.88069 31 - -
7551 1.38629 1.38629 1.38629 1.38629
7552 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7553 32 2.81865 0.23582 2.88868 2.35662 32 - -
7554 1.38629 1.38629 1.38629 1.38629
7555 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7556 33 2.53331 3.02441 0.20344 2.88069 33 - -
7557 1.38629 1.38629 1.38629 1.38629
7558 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7559 34 2.53331 3.02441 0.20344 2.88069 34 - -
7560 1.38629 1.38629 1.38629 1.38629
7561 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7562 35 0.23862 2.84929 2.43386 2.70756 35 - -
7563 1.38629 1.38629 1.38629 1.38629
7564 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7565 36 2.53331 3.02441 0.20344 2.88069 36 - -
7566 1.38629 1.38629 1.38629 1.38629
7567 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7568 37 2.53331 3.02441 0.20344 2.88069 37 - -
7569 1.38629 1.38629 1.38629 1.38629
7570 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7571 38 2.53331 3.02441 0.20344 2.88069 38 - -
7572 1.38629 1.38629 1.38629 1.38629
7573 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7574 39 0.23862 2.84929 2.43386 2.70756 39 - -
7575 1.38629 1.38629 1.38629 1.38629
7576 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7577 40 2.57915 2.25909 2.64442 0.28946 40 - -
7578 1.38629 1.38629 1.38629 1.38629
7579 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7580 41 2.81865 0.23582 2.88868 2.35662 41 - -
7581 1.38629 1.38629 1.38629 1.38629
7582 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7583 42 2.81865 0.23582 2.88868 2.35662 42 - -
7584 1.38629 1.38629 1.38629 1.38629
7585 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7586 43 0.23862 2.84929 2.43386 2.70756 43 - -
7587 1.38629 1.38629 1.38629 1.38629
7588 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7589 44 2.57915 2.25909 2.64442 0.28946 44 - -
7590 1.38629 1.38629 1.38629 1.38629
7591 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7592 45 0.23862 2.84929 2.43386 2.70756 45 - -
7593 1.38629 1.38629 1.38629 1.38629
7594 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
7595 //
7596 HMMER3/b [3.0 | March 2010]
7597 NAME 1_SSU_Chlorophyta_1_SSU_end_one_long
7598 LENG 45
7599 ALPH DNA
7600 RF no
7601 CS no
7602 MAP yes
7603 DATE Wed Jan 25 23:24:42 2012
7604 NSEQ 17
7605 EFFN 3.183350
7606 CKSUM 2896528741
7607 STATS LOCAL MSV -8.0312 0.71931
7608 STATS LOCAL VITERBI -7.7110 0.71931
7609 STATS LOCAL FORWARD -4.3559 0.71931
7610 HMM A C G T
7611 m->m m->i m->d i->m i->i d->m d->d
7612 COMPO 1.39905 1.54747 1.13673 1.51634
7613 1.38629 1.38629 1.38629 1.38629
7614 0.03786 3.98590 3.98590 1.46634 0.26236 0.00000 *
7615 1 0.14808 3.33460 2.77216 3.23198 1 - -
7616 1.38629 1.38629 1.38629 1.38629
7617 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7618 2 2.91540 3.54122 0.12238 3.44111 2 - -
7619 1.38629 1.38629 1.38629 1.38629
7620 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7621 3 3.04275 2.56593 3.09265 0.18625 3 - -
7622 1.38629 1.38629 1.38629 1.38629
7623 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7624 4 3.38042 0.13667 3.43208 2.79048 4 - -
7625 1.38629 1.38629 1.38629 1.38629
7626 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7627 5 2.91540 3.54122 0.12238 3.44111 5 - -
7628 1.38629 1.38629 1.38629 1.38629
7629 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7630 6 3.04275 2.56593 3.09265 0.18625 6 - -
7631 1.38629 1.38629 1.38629 1.38629
7632 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7633 7 0.14808 3.33460 2.77216 3.23198 7 - -
7634 1.38629 1.38629 1.38629 1.38629
7635 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7636 8 0.14808 3.33460 2.77216 3.23198 8 - -
7637 1.38629 1.38629 1.38629 1.38629
7638 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7639 9 3.38042 0.13667 3.43208 2.79048 9 - -
7640 1.38629 1.38629 1.38629 1.38629
7641 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7642 10 0.14808 3.33460 2.77216 3.23198 10 - -
7643 1.38629 1.38629 1.38629 1.38629
7644 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7645 11 0.14808 3.33460 2.77216 3.23198 11 - -
7646 1.38629 1.38629 1.38629 1.38629
7647 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7648 12 2.91540 3.54122 0.12238 3.44111 12 - -
7649 1.38629 1.38629 1.38629 1.38629
7650 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7651 13 2.91540 3.54122 0.12238 3.44111 13 - -
7652 1.38629 1.38629 1.38629 1.38629
7653 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7654 14 3.04275 2.56593 3.09265 0.18625 14 - -
7655 1.38629 1.38629 1.38629 1.38629
7656 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7657 15 3.38042 0.13667 3.43208 2.79048 15 - -
7658 1.38629 1.38629 1.38629 1.38629
7659 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7660 16 3.04275 2.56593 3.09265 0.18625 16 - -
7661 1.38629 1.38629 1.38629 1.38629
7662 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7663 17 3.38042 0.13667 3.43208 2.79048 17 - -
7664 1.38629 1.38629 1.38629 1.38629
7665 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7666 18 3.38042 0.13667 3.43208 2.79048 18 - -
7667 1.38629 1.38629 1.38629 1.38629
7668 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7669 19 2.91540 3.54122 0.12238 3.44111 19 - -
7670 1.38629 1.38629 1.38629 1.38629
7671 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7672 20 3.04275 2.56593 3.09265 0.18625 20 - -
7673 1.38629 1.38629 1.38629 1.38629
7674 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7675 21 0.14808 3.33460 2.77216 3.23198 21 - -
7676 1.38629 1.38629 1.38629 1.38629
7677 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7678 22 2.91540 3.54122 0.12238 3.44111 22 - -
7679 1.38629 1.38629 1.38629 1.38629
7680 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7681 23 2.91540 3.54122 0.12238 3.44111 23 - -
7682 1.38629 1.38629 1.38629 1.38629
7683 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7684 24 3.04275 2.56593 3.09265 0.18625 24 - -
7685 1.38629 1.38629 1.38629 1.38629
7686 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7687 25 2.91540 3.54122 0.12238 3.44111 25 - -
7688 1.38629 1.38629 1.38629 1.38629
7689 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7690 26 0.14808 3.33460 2.77216 3.23198 26 - -
7691 1.38629 1.38629 1.38629 1.38629
7692 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7693 27 0.14808 3.33460 2.77216 3.23198 27 - -
7694 1.38629 1.38629 1.38629 1.38629
7695 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7696 28 3.38042 0.13667 3.43208 2.79048 28 - -
7697 1.38629 1.38629 1.38629 1.38629
7698 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7699 29 3.38042 0.13667 3.43208 2.79048 29 - -
7700 1.38629 1.38629 1.38629 1.38629
7701 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7702 30 3.04275 2.56593 3.09265 0.18625 30 - -
7703 1.38629 1.38629 1.38629 1.38629
7704 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7705 31 2.91540 3.54122 0.12238 3.44111 31 - -
7706 1.38629 1.38629 1.38629 1.38629
7707 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7708 32 3.38042 0.13667 3.43208 2.79048 32 - -
7709 1.38629 1.38629 1.38629 1.38629
7710 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7711 33 2.91540 3.54122 0.12238 3.44111 33 - -
7712 1.38629 1.38629 1.38629 1.38629
7713 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7714 34 2.91540 3.54122 0.12238 3.44111 34 - -
7715 1.38629 1.38629 1.38629 1.38629
7716 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7717 35 0.14808 3.33460 2.77216 3.23198 35 - -
7718 1.38629 1.38629 1.38629 1.38629
7719 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7720 36 2.91540 3.54122 0.12238 3.44111 36 - -
7721 1.38629 1.38629 1.38629 1.38629
7722 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7723 37 2.91540 3.54122 0.12238 3.44111 37 - -
7724 1.38629 1.38629 1.38629 1.38629
7725 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7726 38 2.91540 3.54122 0.12238 3.44111 38 - -
7727 1.38629 1.38629 1.38629 1.38629
7728 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7729 39 0.14808 3.33460 2.77216 3.23198 39 - -
7730 1.38629 1.38629 1.38629 1.38629
7731 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7732 40 3.04275 2.56593 3.09265 0.18625 40 - -
7733 1.38629 1.38629 1.38629 1.38629
7734 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7735 41 3.38042 0.13667 3.43208 2.79048 41 - -
7736 1.38629 1.38629 1.38629 1.38629
7737 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7738 42 0.14808 3.33460 2.77216 3.23198 42 - -
7739 1.38629 1.38629 1.38629 1.38629
7740 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7741 43 3.04275 2.56593 3.09265 0.18625 43 - -
7742 1.38629 1.38629 1.38629 1.38629
7743 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7744 44 3.04275 2.56593 3.09265 0.18625 44 - -
7745 1.38629 1.38629 1.38629 1.38629
7746 0.03786 3.98590 3.98590 1.46634 0.26236 1.09861 0.40547
7747 45 2.91540 3.54122 0.12238 3.44111 45 - -
7748 1.38629 1.38629 1.38629 1.38629
7749 0.01911 3.96715 * 1.46634 0.26236 0.00000 *
7750 //
7751 HMMER3/b [3.0 | March 2010]
7752 NAME 1_SSU_Chlorophyta_1_SSU_end_seven_long
7753 LENG 45
7754 ALPH DNA
7755 RF no
7756 CS no
7757 MAP yes
7758 DATE Wed Jan 25 23:25:34 2012
7759 NSEQ 2
7760 EFFN 2.000000
7761 CKSUM 1241919471
7762 STATS LOCAL MSV -7.4998 0.72801
7763 STATS LOCAL VITERBI -8.1905 0.72801
7764 STATS LOCAL FORWARD -3.4574 0.72801
7765 HMM A C G T
7766 m->m m->i m->d i->m i->i d->m d->d
7767 COMPO 1.33801 1.52553 1.31435 1.38040
7768 1.38629 1.38629 1.38629 1.38629
7769 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
7770 1 0.23862 2.84929 2.43386 2.70756 1 - -
7771 1.38629 1.38629 1.38629 1.38629
7772 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7773 2 2.57915 2.25909 2.64442 0.28946 2 - -
7774 1.38629 1.38629 1.38629 1.38629
7775 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7776 3 2.57915 2.25909 2.64442 0.28946 3 - -
7777 1.38629 1.38629 1.38629 1.38629
7778 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7779 4 2.81865 0.23582 2.88868 2.35662 4 - -
7780 1.38629 1.38629 1.38629 1.38629
7781 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7782 5 2.53331 3.02441 0.20344 2.88069 5 - -
7783 1.38629 1.38629 1.38629 1.38629
7784 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7785 6 2.57915 2.25909 2.64442 0.28946 6 - -
7786 1.38629 1.38629 1.38629 1.38629
7787 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7788 7 0.23862 2.84929 2.43386 2.70756 7 - -
7789 1.38629 1.38629 1.38629 1.38629
7790 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7791 8 0.23862 2.84929 2.43386 2.70756 8 - -
7792 1.38629 1.38629 1.38629 1.38629
7793 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7794 9 2.81865 0.23582 2.88868 2.35662 9 - -
7795 1.38629 1.38629 1.38629 1.38629
7796 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7797 10 2.81865 0.23582 2.88868 2.35662 10 - -
7798 1.38629 1.38629 1.38629 1.38629
7799 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7800 11 0.23862 2.84929 2.43386 2.70756 11 - -
7801 1.38629 1.38629 1.38629 1.38629
7802 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7803 12 0.23862 2.84929 2.43386 2.70756 12 - -
7804 1.38629 1.38629 1.38629 1.38629
7805 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7806 13 2.53331 3.02441 0.20344 2.88069 13 - -
7807 1.38629 1.38629 1.38629 1.38629
7808 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7809 14 2.57915 2.25909 2.64442 0.28946 14 - -
7810 1.38629 1.38629 1.38629 1.38629
7811 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7812 15 2.57915 2.25909 2.64442 0.28946 15 - -
7813 1.38629 1.38629 1.38629 1.38629
7814 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7815 16 2.57915 2.25909 2.64442 0.28946 16 - -
7816 1.38629 1.38629 1.38629 1.38629
7817 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7818 17 2.81865 0.23582 2.88868 2.35662 17 - -
7819 1.38629 1.38629 1.38629 1.38629
7820 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7821 18 2.81865 0.23582 2.88868 2.35662 18 - -
7822 1.38629 1.38629 1.38629 1.38629
7823 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7824 19 2.53331 3.02441 0.20344 2.88069 19 - -
7825 1.38629 1.38629 1.38629 1.38629
7826 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7827 20 2.57915 2.25909 2.64442 0.28946 20 - -
7828 1.38629 1.38629 1.38629 1.38629
7829 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7830 21 0.23862 2.84929 2.43386 2.70756 21 - -
7831 1.38629 1.38629 1.38629 1.38629
7832 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7833 22 2.53331 3.02441 0.20344 2.88069 22 - -
7834 1.38629 1.38629 1.38629 1.38629
7835 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7836 23 2.53331 3.02441 0.20344 2.88069 23 - -
7837 1.38629 1.38629 1.38629 1.38629
7838 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7839 24 2.57915 2.25909 2.64442 0.28946 24 - -
7840 1.38629 1.38629 1.38629 1.38629
7841 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7842 25 2.53331 3.02441 0.20344 2.88069 25 - -
7843 1.38629 1.38629 1.38629 1.38629
7844 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7845 26 0.23862 2.84929 2.43386 2.70756 26 - -
7846 1.38629 1.38629 1.38629 1.38629
7847 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7848 27 0.23862 2.84929 2.43386 2.70756 27 - -
7849 1.38629 1.38629 1.38629 1.38629
7850 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7851 28 2.81865 0.23582 2.88868 2.35662 28 - -
7852 1.38629 1.38629 1.38629 1.38629
7853 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7854 29 2.81865 0.23582 2.88868 2.35662 29 - -
7855 1.38629 1.38629 1.38629 1.38629
7856 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7857 30 2.57915 2.25909 2.64442 0.28946 30 - -
7858 1.38629 1.38629 1.38629 1.38629
7859 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7860 31 2.53331 3.02441 0.20344 2.88069 31 - -
7861 1.38629 1.38629 1.38629 1.38629
7862 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7863 32 2.81865 0.23582 2.88868 2.35662 32 - -
7864 1.38629 1.38629 1.38629 1.38629
7865 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7866 33 2.53331 3.02441 0.20344 2.88069 33 - -
7867 1.38629 1.38629 1.38629 1.38629
7868 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7869 34 2.53331 3.02441 0.20344 2.88069 34 - -
7870 1.38629 1.38629 1.38629 1.38629
7871 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7872 35 0.23862 2.84929 2.43386 2.70756 35 - -
7873 1.38629 1.38629 1.38629 1.38629
7874 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7875 36 0.23862 2.84929 2.43386 2.70756 36 - -
7876 1.38629 1.38629 1.38629 1.38629
7877 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7878 37 2.53331 3.02441 0.20344 2.88069 37 - -
7879 1.38629 1.38629 1.38629 1.38629
7880 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7881 38 2.53331 3.02441 0.20344 2.88069 38 - -
7882 1.38629 1.38629 1.38629 1.38629
7883 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7884 39 0.23862 2.84929 2.43386 2.70756 39 - -
7885 1.38629 1.38629 1.38629 1.38629
7886 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7887 40 2.57915 2.25909 2.64442 0.28946 40 - -
7888 1.38629 1.38629 1.38629 1.38629
7889 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7890 41 2.81865 0.23582 2.88868 2.35662 41 - -
7891 1.38629 1.38629 1.38629 1.38629
7892 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7893 42 0.23862 2.84929 2.43386 2.70756 42 - -
7894 1.38629 1.38629 1.38629 1.38629
7895 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7896 43 2.57915 2.25909 2.64442 0.28946 43 - -
7897 1.38629 1.38629 1.38629 1.38629
7898 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7899 44 2.57915 2.25909 2.64442 0.28946 44 - -
7900 1.38629 1.38629 1.38629 1.38629
7901 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
7902 45 2.53331 3.02441 0.20344 2.88069 45 - -
7903 1.38629 1.38629 1.38629 1.38629
7904 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
7905 //
7906 HMMER3/b [3.0 | March 2010]
7907 NAME 1_SSU_Chlorophyta_1_SSU_end_six_long
7908 LENG 45
7909 ALPH DNA
7910 RF no
7911 CS no
7912 MAP yes
7913 DATE Wed Jan 25 23:25:26 2012
7914 NSEQ 5
7915 EFFN 3.247070
7916 CKSUM 1322824676
7917 STATS LOCAL MSV -7.9755 0.71931
7918 STATS LOCAL VITERBI -7.6686 0.71931
7919 STATS LOCAL FORWARD -4.1183 0.71931
7920 HMM A C G T
7921 m->m m->i m->d i->m i->i d->m d->d
7922 COMPO 1.33346 1.62242 1.24914 1.37727
7923 1.38629 1.38629 1.38629 1.38629
7924 0.03741 3.99766 3.99766 1.46634 0.26236 0.00000 *
7925 1 0.14518 3.35575 2.78597 3.25510 1 - -
7926 1.38629 1.38629 1.38629 1.38629
7927 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7928 2 3.06393 2.57943 3.11303 0.18271 2 - -
7929 1.38629 1.38629 1.38629 1.38629
7930 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7931 3 3.06393 2.57943 3.11303 0.18271 3 - -
7932 1.38629 1.38629 1.38629 1.38629
7933 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7934 4 3.40484 0.13363 3.45549 2.80837 4 - -
7935 1.38629 1.38629 1.38629 1.38629
7936 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7937 5 2.93035 3.56282 0.11992 3.46492 5 - -
7938 1.38629 1.38629 1.38629 1.38629
7939 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7940 6 3.06393 2.57943 3.11303 0.18271 6 - -
7941 1.38629 1.38629 1.38629 1.38629
7942 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7943 7 0.14518 3.35575 2.78597 3.25510 7 - -
7944 1.38629 1.38629 1.38629 1.38629
7945 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7946 8 0.14518 3.35575 2.78597 3.25510 8 - -
7947 1.38629 1.38629 1.38629 1.38629
7948 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7949 9 3.40484 0.13363 3.45549 2.80837 9 - -
7950 1.38629 1.38629 1.38629 1.38629
7951 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7952 10 0.14518 3.35575 2.78597 3.25510 10 - -
7953 1.38629 1.38629 1.38629 1.38629
7954 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7955 11 0.14518 3.35575 2.78597 3.25510 11 - -
7956 1.38629 1.38629 1.38629 1.38629
7957 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7958 12 2.93035 3.56282 0.11992 3.46492 12 - -
7959 1.38629 1.38629 1.38629 1.38629
7960 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7961 13 2.93035 3.56282 0.11992 3.46492 13 - -
7962 1.38629 1.38629 1.38629 1.38629
7963 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7964 14 3.06393 2.57943 3.11303 0.18271 14 - -
7965 1.38629 1.38629 1.38629 1.38629
7966 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7967 15 3.06393 2.57943 3.11303 0.18271 15 - -
7968 1.38629 1.38629 1.38629 1.38629
7969 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7970 16 3.06393 2.57943 3.11303 0.18271 16 - -
7971 1.38629 1.38629 1.38629 1.38629
7972 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7973 17 3.40484 0.13363 3.45549 2.80837 17 - -
7974 1.38629 1.38629 1.38629 1.38629
7975 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7976 18 3.40484 0.13363 3.45549 2.80837 18 - -
7977 1.38629 1.38629 1.38629 1.38629
7978 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7979 19 2.93035 3.56282 0.11992 3.46492 19 - -
7980 1.38629 1.38629 1.38629 1.38629
7981 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7982 20 3.06393 2.57943 3.11303 0.18271 20 - -
7983 1.38629 1.38629 1.38629 1.38629
7984 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7985 21 0.14518 3.35575 2.78597 3.25510 21 - -
7986 1.38629 1.38629 1.38629 1.38629
7987 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7988 22 2.93035 3.56282 0.11992 3.46492 22 - -
7989 1.38629 1.38629 1.38629 1.38629
7990 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7991 23 2.93035 3.56282 0.11992 3.46492 23 - -
7992 1.38629 1.38629 1.38629 1.38629
7993 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7994 24 3.06393 2.57943 3.11303 0.18271 24 - -
7995 1.38629 1.38629 1.38629 1.38629
7996 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
7997 25 2.93035 3.56282 0.11992 3.46492 25 - -
7998 1.38629 1.38629 1.38629 1.38629
7999 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8000 26 0.14518 3.35575 2.78597 3.25510 26 - -
8001 1.38629 1.38629 1.38629 1.38629
8002 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8003 27 0.14518 3.35575 2.78597 3.25510 27 - -
8004 1.38629 1.38629 1.38629 1.38629
8005 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8006 28 3.40484 0.13363 3.45549 2.80837 28 - -
8007 1.38629 1.38629 1.38629 1.38629
8008 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8009 29 3.40484 0.13363 3.45549 2.80837 29 - -
8010 1.38629 1.38629 1.38629 1.38629
8011 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8012 30 3.06393 2.57943 3.11303 0.18271 30 - -
8013 1.38629 1.38629 1.38629 1.38629
8014 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8015 31 2.93035 3.56282 0.11992 3.46492 31 - -
8016 1.38629 1.38629 1.38629 1.38629
8017 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8018 32 3.40484 0.13363 3.45549 2.80837 32 - -
8019 1.38629 1.38629 1.38629 1.38629
8020 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8021 33 2.93035 3.56282 0.11992 3.46492 33 - -
8022 1.38629 1.38629 1.38629 1.38629
8023 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8024 34 2.93035 3.56282 0.11992 3.46492 34 - -
8025 1.38629 1.38629 1.38629 1.38629
8026 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8027 35 0.14518 3.35575 2.78597 3.25510 35 - -
8028 1.38629 1.38629 1.38629 1.38629
8029 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8030 36 0.14518 3.35575 2.78597 3.25510 36 - -
8031 1.38629 1.38629 1.38629 1.38629
8032 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8033 37 2.93035 3.56282 0.11992 3.46492 37 - -
8034 1.38629 1.38629 1.38629 1.38629
8035 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8036 38 2.93035 3.56282 0.11992 3.46492 38 - -
8037 1.38629 1.38629 1.38629 1.38629
8038 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8039 39 0.14518 3.35575 2.78597 3.25510 39 - -
8040 1.38629 1.38629 1.38629 1.38629
8041 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8042 40 3.06393 2.57943 3.11303 0.18271 40 - -
8043 1.38629 1.38629 1.38629 1.38629
8044 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8045 41 3.40484 0.13363 3.45549 2.80837 41 - -
8046 1.38629 1.38629 1.38629 1.38629
8047 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8048 42 0.14518 3.35575 2.78597 3.25510 42 - -
8049 1.38629 1.38629 1.38629 1.38629
8050 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8051 43 3.06393 2.57943 3.11303 0.18271 43 - -
8052 1.38629 1.38629 1.38629 1.38629
8053 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8054 44 3.06393 2.57943 3.11303 0.18271 44 - -
8055 1.38629 1.38629 1.38629 1.38629
8056 0.03741 3.99766 3.99766 1.46634 0.26236 1.09861 0.40547
8057 45 2.93035 3.56282 0.11992 3.46492 45 - -
8058 1.38629 1.38629 1.38629 1.38629
8059 0.01888 3.97913 * 1.46634 0.26236 0.00000 *
8060 //
8061 HMMER3/b [3.0 | March 2010]
8062 NAME 1_SSU_Chlorophyta_1_SSU_end_three_long
8063 LENG 45
8064 ALPH DNA
8065 RF no
8066 CS no
8067 MAP yes
8068 DATE Wed Jan 25 23:24:57 2012
8069 NSEQ 4
8070 EFFN 3.230469
8071 CKSUM 805615287
8072 STATS LOCAL MSV -8.0211 0.71931
8073 STATS LOCAL VITERBI -7.6818 0.71931
8074 STATS LOCAL FORWARD -4.1105 0.71931
8075 HMM A C G T
8076 m->m m->i m->d i->m i->i d->m d->d
8077 COMPO 1.27186 1.62653 1.24657 1.44566
8078 1.38629 1.38629 1.38629 1.38629
8079 0.03752 3.99461 3.99461 1.46634 0.26236 0.00000 *
8080 1 0.14592 3.35028 2.78241 3.24912 1 - -
8081 1.38629 1.38629 1.38629 1.38629
8082 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8083 2 2.92650 3.55724 0.12055 3.45877 2 - -
8084 1.38629 1.38629 1.38629 1.38629
8085 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8086 3 3.05845 2.57594 3.10775 0.18362 3 - -
8087 1.38629 1.38629 1.38629 1.38629
8088 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8089 4 3.39853 0.13441 3.44944 2.80375 4 - -
8090 1.38629 1.38629 1.38629 1.38629
8091 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8092 5 2.92650 3.55724 0.12055 3.45877 5 - -
8093 1.38629 1.38629 1.38629 1.38629
8094 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8095 6 3.05845 2.57594 3.10775 0.18362 6 - -
8096 1.38629 1.38629 1.38629 1.38629
8097 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8098 7 0.14592 3.35028 2.78241 3.24912 7 - -
8099 1.38629 1.38629 1.38629 1.38629
8100 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8101 8 0.14592 3.35028 2.78241 3.24912 8 - -
8102 1.38629 1.38629 1.38629 1.38629
8103 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8104 9 3.39853 0.13441 3.44944 2.80375 9 - -
8105 1.38629 1.38629 1.38629 1.38629
8106 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8107 10 0.14592 3.35028 2.78241 3.24912 10 - -
8108 1.38629 1.38629 1.38629 1.38629
8109 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8110 11 0.14592 3.35028 2.78241 3.24912 11 - -
8111 1.38629 1.38629 1.38629 1.38629
8112 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8113 12 2.92650 3.55724 0.12055 3.45877 12 - -
8114 1.38629 1.38629 1.38629 1.38629
8115 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8116 13 2.92650 3.55724 0.12055 3.45877 13 - -
8117 1.38629 1.38629 1.38629 1.38629
8118 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8119 14 3.05845 2.57594 3.10775 0.18362 14 - -
8120 1.38629 1.38629 1.38629 1.38629
8121 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8122 15 3.05845 2.57594 3.10775 0.18362 15 - -
8123 1.38629 1.38629 1.38629 1.38629
8124 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8125 16 3.05845 2.57594 3.10775 0.18362 16 - -
8126 1.38629 1.38629 1.38629 1.38629
8127 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8128 17 3.39853 0.13441 3.44944 2.80375 17 - -
8129 1.38629 1.38629 1.38629 1.38629
8130 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8131 18 3.39853 0.13441 3.44944 2.80375 18 - -
8132 1.38629 1.38629 1.38629 1.38629
8133 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8134 19 2.92650 3.55724 0.12055 3.45877 19 - -
8135 1.38629 1.38629 1.38629 1.38629
8136 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8137 20 3.05845 2.57594 3.10775 0.18362 20 - -
8138 1.38629 1.38629 1.38629 1.38629
8139 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8140 21 0.14592 3.35028 2.78241 3.24912 21 - -
8141 1.38629 1.38629 1.38629 1.38629
8142 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8143 22 2.92650 3.55724 0.12055 3.45877 22 - -
8144 1.38629 1.38629 1.38629 1.38629
8145 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8146 23 2.92650 3.55724 0.12055 3.45877 23 - -
8147 1.38629 1.38629 1.38629 1.38629
8148 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8149 24 3.05845 2.57594 3.10775 0.18362 24 - -
8150 1.38629 1.38629 1.38629 1.38629
8151 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8152 25 2.92650 3.55724 0.12055 3.45877 25 - -
8153 1.38629 1.38629 1.38629 1.38629
8154 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8155 26 0.14592 3.35028 2.78241 3.24912 26 - -
8156 1.38629 1.38629 1.38629 1.38629
8157 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8158 27 0.14592 3.35028 2.78241 3.24912 27 - -
8159 1.38629 1.38629 1.38629 1.38629
8160 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8161 28 3.39853 0.13441 3.44944 2.80375 28 - -
8162 1.38629 1.38629 1.38629 1.38629
8163 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8164 29 3.39853 0.13441 3.44944 2.80375 29 - -
8165 1.38629 1.38629 1.38629 1.38629
8166 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8167 30 3.05845 2.57594 3.10775 0.18362 30 - -
8168 1.38629 1.38629 1.38629 1.38629
8169 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8170 31 2.92650 3.55724 0.12055 3.45877 31 - -
8171 1.38629 1.38629 1.38629 1.38629
8172 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8173 32 3.39853 0.13441 3.44944 2.80375 32 - -
8174 1.38629 1.38629 1.38629 1.38629
8175 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8176 33 2.92650 3.55724 0.12055 3.45877 33 - -
8177 1.38629 1.38629 1.38629 1.38629
8178 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8179 34 2.92650 3.55724 0.12055 3.45877 34 - -
8180 1.38629 1.38629 1.38629 1.38629
8181 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8182 35 0.14592 3.35028 2.78241 3.24912 35 - -
8183 1.38629 1.38629 1.38629 1.38629
8184 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8185 36 0.14592 3.35028 2.78241 3.24912 36 - -
8186 1.38629 1.38629 1.38629 1.38629
8187 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8188 37 2.92650 3.55724 0.12055 3.45877 37 - -
8189 1.38629 1.38629 1.38629 1.38629
8190 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8191 38 2.92650 3.55724 0.12055 3.45877 38 - -
8192 1.38629 1.38629 1.38629 1.38629
8193 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8194 39 0.14592 3.35028 2.78241 3.24912 39 - -
8195 1.38629 1.38629 1.38629 1.38629
8196 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8197 40 3.05845 2.57594 3.10775 0.18362 40 - -
8198 1.38629 1.38629 1.38629 1.38629
8199 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8200 41 3.39853 0.13441 3.44944 2.80375 41 - -
8201 1.38629 1.38629 1.38629 1.38629
8202 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8203 42 0.14592 3.35028 2.78241 3.24912 42 - -
8204 1.38629 1.38629 1.38629 1.38629
8205 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8206 43 3.05845 2.57594 3.10775 0.18362 43 - -
8207 1.38629 1.38629 1.38629 1.38629
8208 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8209 44 3.05845 2.57594 3.10775 0.18362 44 - -
8210 1.38629 1.38629 1.38629 1.38629
8211 0.03752 3.99461 3.99461 1.46634 0.26236 1.09861 0.40547
8212 45 0.14592 3.35028 2.78241 3.24912 45 - -
8213 1.38629 1.38629 1.38629 1.38629
8214 0.01894 3.97602 * 1.46634 0.26236 0.00000 *
8215 //
8216 HMMER3/b [3.0 | March 2010]
8217 NAME 1_SSU_Chlorophyta_1_SSU_end_two_long
8218 LENG 45
8219 ALPH DNA
8220 RF no
8221 CS no
8222 MAP yes
8223 DATE Wed Jan 25 23:24:49 2012
8224 NSEQ 14
8225 EFFN 3.216309
8226 CKSUM 4158192941
8227 STATS LOCAL MSV -7.9726 0.71932
8228 STATS LOCAL VITERBI -7.6791 0.71932
8229 STATS LOCAL FORWARD -4.0862 0.71932
8230 HMM A C G T
8231 m->m m->i m->d i->m i->i d->m d->d
8232 COMPO 1.33300 1.62698 1.18954 1.44633
8233 1.38629 1.38629 1.38629 1.38629
8234 0.03762 3.99200 3.99200 1.46634 0.26236 0.00000 *
8235 1 0.14656 3.34560 2.77935 3.24400 1 - -
8236 1.38629 1.38629 1.38629 1.38629
8237 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8238 2 2.92319 3.55246 0.12110 3.45350 2 - -
8239 1.38629 1.38629 1.38629 1.38629
8240 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8241 3 3.05375 2.57294 3.10323 0.18440 3 - -
8242 1.38629 1.38629 1.38629 1.38629
8243 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8244 4 3.39312 0.13508 3.44425 2.79979 4 - -
8245 1.38629 1.38629 1.38629 1.38629
8246 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8247 5 2.92319 3.55246 0.12110 3.45350 5 - -
8248 1.38629 1.38629 1.38629 1.38629
8249 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8250 6 3.05375 2.57294 3.10323 0.18440 6 - -
8251 1.38629 1.38629 1.38629 1.38629
8252 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8253 7 0.14656 3.34560 2.77935 3.24400 7 - -
8254 1.38629 1.38629 1.38629 1.38629
8255 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8256 8 0.14656 3.34560 2.77935 3.24400 8 - -
8257 1.38629 1.38629 1.38629 1.38629
8258 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8259 9 3.39312 0.13508 3.44425 2.79979 9 - -
8260 1.38629 1.38629 1.38629 1.38629
8261 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8262 10 0.14656 3.34560 2.77935 3.24400 10 - -
8263 1.38629 1.38629 1.38629 1.38629
8264 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8265 11 0.14656 3.34560 2.77935 3.24400 11 - -
8266 1.38629 1.38629 1.38629 1.38629
8267 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8268 12 2.92319 3.55246 0.12110 3.45350 12 - -
8269 1.38629 1.38629 1.38629 1.38629
8270 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8271 13 2.92319 3.55246 0.12110 3.45350 13 - -
8272 1.38629 1.38629 1.38629 1.38629
8273 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8274 14 3.05375 2.57294 3.10323 0.18440 14 - -
8275 1.38629 1.38629 1.38629 1.38629
8276 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8277 15 3.05375 2.57294 3.10323 0.18440 15 - -
8278 1.38629 1.38629 1.38629 1.38629
8279 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8280 16 3.05375 2.57294 3.10323 0.18440 16 - -
8281 1.38629 1.38629 1.38629 1.38629
8282 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8283 17 3.39312 0.13508 3.44425 2.79979 17 - -
8284 1.38629 1.38629 1.38629 1.38629
8285 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8286 18 3.39312 0.13508 3.44425 2.79979 18 - -
8287 1.38629 1.38629 1.38629 1.38629
8288 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8289 19 2.92319 3.55246 0.12110 3.45350 19 - -
8290 1.38629 1.38629 1.38629 1.38629
8291 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8292 20 3.05375 2.57294 3.10323 0.18440 20 - -
8293 1.38629 1.38629 1.38629 1.38629
8294 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8295 21 0.14656 3.34560 2.77935 3.24400 21 - -
8296 1.38629 1.38629 1.38629 1.38629
8297 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8298 22 2.92319 3.55246 0.12110 3.45350 22 - -
8299 1.38629 1.38629 1.38629 1.38629
8300 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8301 23 2.92319 3.55246 0.12110 3.45350 23 - -
8302 1.38629 1.38629 1.38629 1.38629
8303 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8304 24 3.05375 2.57294 3.10323 0.18440 24 - -
8305 1.38629 1.38629 1.38629 1.38629
8306 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8307 25 2.92319 3.55246 0.12110 3.45350 25 - -
8308 1.38629 1.38629 1.38629 1.38629
8309 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8310 26 0.14656 3.34560 2.77935 3.24400 26 - -
8311 1.38629 1.38629 1.38629 1.38629
8312 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8313 27 0.14656 3.34560 2.77935 3.24400 27 - -
8314 1.38629 1.38629 1.38629 1.38629
8315 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8316 28 3.39312 0.13508 3.44425 2.79979 28 - -
8317 1.38629 1.38629 1.38629 1.38629
8318 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8319 29 3.39312 0.13508 3.44425 2.79979 29 - -
8320 1.38629 1.38629 1.38629 1.38629
8321 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8322 30 3.05375 2.57294 3.10323 0.18440 30 - -
8323 1.38629 1.38629 1.38629 1.38629
8324 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8325 31 2.92319 3.55246 0.12110 3.45350 31 - -
8326 1.38629 1.38629 1.38629 1.38629
8327 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8328 32 3.39312 0.13508 3.44425 2.79979 32 - -
8329 1.38629 1.38629 1.38629 1.38629
8330 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8331 33 2.92319 3.55246 0.12110 3.45350 33 - -
8332 1.38629 1.38629 1.38629 1.38629
8333 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8334 34 2.92319 3.55246 0.12110 3.45350 34 - -
8335 1.38629 1.38629 1.38629 1.38629
8336 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8337 35 0.14656 3.34560 2.77935 3.24400 35 - -
8338 1.38629 1.38629 1.38629 1.38629
8339 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8340 36 0.14656 3.34560 2.77935 3.24400 36 - -
8341 1.38629 1.38629 1.38629 1.38629
8342 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8343 37 2.92319 3.55246 0.12110 3.45350 37 - -
8344 1.38629 1.38629 1.38629 1.38629
8345 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8346 38 2.92319 3.55246 0.12110 3.45350 38 - -
8347 1.38629 1.38629 1.38629 1.38629
8348 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8349 39 0.14656 3.34560 2.77935 3.24400 39 - -
8350 1.38629 1.38629 1.38629 1.38629
8351 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8352 40 3.05375 2.57294 3.10323 0.18440 40 - -
8353 1.38629 1.38629 1.38629 1.38629
8354 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8355 41 3.39312 0.13508 3.44425 2.79979 41 - -
8356 1.38629 1.38629 1.38629 1.38629
8357 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8358 42 0.14656 3.34560 2.77935 3.24400 42 - -
8359 1.38629 1.38629 1.38629 1.38629
8360 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8361 43 3.05375 2.57294 3.10323 0.18440 43 - -
8362 1.38629 1.38629 1.38629 1.38629
8363 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8364 44 3.05375 2.57294 3.10323 0.18440 44 - -
8365 1.38629 1.38629 1.38629 1.38629
8366 0.03762 3.99200 3.99200 1.46634 0.26236 1.09861 0.40547
8367 45 2.92319 3.55246 0.12110 3.45350 45 - -
8368 1.38629 1.38629 1.38629 1.38629
8369 0.01899 3.97336 * 1.46634 0.26236 0.00000 *
8370 //