annotate test-data/daan_test_unanno.fasta @ 2:9ca209477dfd draft default tip

planemo upload for repository https://github.com/Onnodg/Naturalis_NLOOR/tree/main/NLOOR_scripts/process_annotations_tool commit 4017d38cf327c48a6252e488ba792527dae97a70-dirty

>M01687:476:000000000-LL5F5:1:1102:17262:1752_CONS(552) count=552; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=58; mode=alignment; seq_b_deletion=243; seq_a_deletion=243; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:10672:1881_CONS(5) count=5; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=51; mode=alignment; seq_b_deletion=250; seq_a_deletion=250; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttcctgtgttacaggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:23654:2087_CONS(290) count=290; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=64; mode=alignment; seq_b_deletion=237; seq_a_deletion=237; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttttaacgatttattactccgtcgttaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:1102:17530:2780_CONS(20) count=20; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=58; mode=alignment; seq_b_deletion=243; seq_a_deletion=243; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatcctttccctacatgacgctcttggctcaggattgcc
>M01687:476:000000000-LL5F5:1:1102:5650:3591_CONS(1003) count=1003; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=53; mode=alignment; seq_b_deletion=248; seq_a_deletion=248; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:6067:4539_CONS(179) count=179; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=49; mode=alignment; seq_b_deletion=252; seq_a_deletion=252; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatctgaactccagttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:24942:4610_CONS(3) count=3; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=53; mode=alignment; seq_b_deletion=248; seq_a_deletion=248; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatctgaac
>M01687:476:000000000-LL5F5:1:1102:11192:4681_CONS(1) ali_length=108; seq_ab_match=108; sminR=40.0; seq_a_deletion=193; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=431.703213559; seq_a_single=0; score_norm=3.9972519774; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=193; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacacgacgctcttcagatctccattgagtc
tctgcacctatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:15144:4851_CONS(67) count=67; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=56; mode=alignment; seq_b_deletion=245; seq_a_deletion=245; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttcttacggtataccgtaagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:16361:6674_CONS(1) ali_length=62; seq_ab_match=62; sminR=40.0; seq_a_deletion=239; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=247.798619924; seq_a_single=0; score_norm=3.99675193425; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=239; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttctggcctactattgtcctcgaccagcttggctcagattgc
cc
>M01687:476:000000000-LL5F5:1:1102:23271:6864_CONS(33) count=33; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=57; mode=alignment; seq_b_deletion=244; seq_a_deletion=244; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttccgcgaaaaacatccgcggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:20208:7305_CONS(199) count=199; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=66; mode=alignment; seq_b_deletion=235; seq_b_single=0; obiclean_headcount=0; obiclean_samplecount=1; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:1102:13158:7436_CONS(1) ali_length=66; seq_ab_match=64; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=2; score=246.856761191; seq_a_single=0; score_norm=3.74025395744; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagactctgcacctatcggaagagcgtcgtgtagggaaagagtgttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:1102:15839:8115_CONS(1) ali_length=74; seq_ab_match=74; sminR=40.0; seq_a_deletion=227; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=295.789477414; seq_a_single=0; score_norm=3.99715510019; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=227; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctcgacccacatggcttgagccactacatccgaggcttg
gctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:8916:8240_CONS(3) count=3; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=53; mode=alignment; seq_b_deletion=248; seq_b_mismatch=0; seq_a_deletion=248; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatctgagctccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:24598:8389_CONS(1) ali_length=56; seq_ab_match=44; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=7; score=42.1230137575; seq_a_single=0; score_norm=0.752196674241; obiclean_internalcount=0; direction=right; seq_b_insertion=5; obiclean_head=True; seq_b_deletion=250; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccgccggtgcaccggcggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:3061:8449_CONS(266) count=266; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=67; mode=alignment; seq_b_deletion=234; seq_a_deletion=234; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgtttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:1102:16245:9240_CONS(1) ali_length=89; seq_ab_match=89; sminR=40.0; seq_a_deletion=212; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=355.754185105; seq_a_single=0; score_norm=3.99723803489; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=212; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttattttcgctttctgaacctttgtttgttttc
ggaaaacgtgatttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:20457:9436_CONS(1) ali_length=59; seq_ab_match=59; sminR=40.0; seq_a_deletion=242; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=242; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgacgctcttggctcaggatttgccc
>M01687:476:000000000-LL5F5:1:1102:21564:10371_CONS(90) count=90; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=65; mode=alignment; seq_b_deletion=236; seq_a_deletion=236; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttcaagcctactatttgtccttcggcttgcttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:1102:13373:10753_CONS(2) count=2; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=52; mode=alignment; seq_b_deletion=249; seq_a_deletion=249; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
cattgagtctctgcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:20817:10836_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=3; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagtcacctggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:22712:11629_CONS(17) count=17; obiclean_internalcount=0; direction=right; seq_b_single=0; sminR=40.0; obiclean_singletoncount=0; ali_length=17; mode=alignment; seq_b_deletion=284; seq_b_mismatch=0; seq_a_deletion=284; obiclean_headcount=1; seq_b_insertion=0; seq_a_insertion=0; obiclean_samplecount=1; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgccc
>M01687:476:000000000-LL5F5:1:1102:3986:11672_CONS(22) count=22; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=55; mode=alignment; seq_b_deletion=246; seq_a_deletion=246; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttctttcacgcatgaaagccttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:15122:12217_CONS(109) count=109; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=59; mode=alignment; seq_b_deletion=242; seq_a_deletion=242; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctaatttaatcatttaaattaaatcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:22171:12694_CONS(5) count=5; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=56; mode=alignment; seq_b_deletion=245; seq_a_deletion=245; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttccggaggtgtacccccggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:28129:13712_CONS(35) count=35; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=85; mode=alignment; seq_b_deletion=216; seq_a_deletion=216; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatccttttttattatcgctttatgaacccttattttcataa
aacaggatttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:15963:13973_CONS(1) ali_length=20; seq_ab_match=20; sminR=40.0; seq_a_deletion=281; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=79.9275504097; seq_a_single=0; score_norm=3.99637752049; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=281; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:19880:14102_CONS(1) ali_length=64; seq_ab_match=64; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=255.818558708; seq_a_single=0; score_norm=3.99716497981; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcaacgatttattactccgtcgttaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:1102:8384:14183_CONS(39) count=39; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=58; mode=alignment; seq_b_deletion=243; seq_a_deletion=243; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttcaaactaatttcttatttagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:17924:16592_CONS(26) count=26; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=56; mode=alignment; seq_b_deletion=245; seq_a_deletion=245; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttcctgtgatgtatcacaggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:24314:17159_CONS(25) count=25; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=74; mode=alignment; seq_b_deletion=227; seq_a_deletion=227; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttctgacctaccgatcttgcgatcatcctttcagtcagcttg
gctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:17948:17357_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.803721239; seq_a_single=0; score_norm=3.99629662715; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
tcattgagtctctgcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:17178:18834_CONS(1) ali_length=52; seq_ab_match=52; sminR=40.0; seq_a_deletion=249; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=249; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=3; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgatctctgcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:13954:20538_CONS(1) ali_length=76; seq_ab_match=76; sminR=40.0; seq_a_deletion=225; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=225; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=4; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcctcttccgatctccattgagtctctgcacctatctgaactccagt
tggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:15756:21286_CONS(1) ali_length=60; seq_ab_match=60; sminR=40.0; seq_a_deletion=241; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=241; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccgtagtgctttcgcgcttcggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:19351:22876_CONS(1) ali_length=52; seq_ab_match=48; sminR=40.0; seq_a_deletion=249; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=4; score=175.327556142; seq_a_single=0; score_norm=3.37168377196; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=249; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccttgagtctctgcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1102:23551:23689_CONS(47) count=47; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=63; mode=alignment; seq_b_deletion=238; seq_a_deletion=238; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttctggcctactattgtcctcgaccagcttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:1102:19734:24260_CONS(1) ali_length=78; seq_ab_match=78; sminR=40.0; seq_a_deletion=223; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=223; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=4; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttctttctgaacctttgttttgggaaaacagga
tttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1101:17862:2048_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=6; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctaaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1101:23267:3503_CONS(2) count=2; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=63; mode=alignment; seq_b_deletion=238; seq_a_deletion=238; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctttaacgatttattactccgtcgttaacttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:1101:13356:3665_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.17802904; seq_a_single=0; score_norm=3.98754589454; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattggtctctgcacctatcggaagagcgtcgtgtagggaaagagtgtttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:1101:12249:4646_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=251.780549294; seq_a_single=0; score_norm=3.99651665546; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=238; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagctctgcacctatcacactctttccctacacgacactctttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:1101:15463:5877_CONS(1) ali_length=65; seq_ab_match=65; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=259.79407704; seq_a_single=0; score_norm=3.99683195446; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccatcaagcctactatttgtccttcggtttgcttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:1101:22864:7140_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=238; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=13; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcacactctttccctacacgacactcttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:1101:20413:7447_CONS(1) ali_length=107; seq_ab_match=70; sminR=40.0; seq_a_deletion=194; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=13; seq_b_mismatch=23; score=100.001213354; seq_a_single=0; score_norm=0.934590779013; obiclean_internalcount=1; direction=right; seq_b_insertion=1; obiclean_head=False; seq_b_deletion=195; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttgt
>M01687:476:000000000-LL5F5:1:1101:12146:7496_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.81456278; seq_a_single=0; score_norm=3.99650118453; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgaacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1101:28794:8379_CONS(1) ali_length=108; seq_ab_match=108; sminR=40.0; seq_a_deletion=193; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=431.657977536; seq_a_single=0; score_norm=3.99683312533; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=193; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacacgacactcttccgatctccattgagtc
tctgcacctatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1101:28450:9810_CONS(19) count=19; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=74; mode=alignment; seq_b_deletion=227; seq_a_deletion=227; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttcctcgaccctcatggcttgagccactacatccgaggcttg
gctcaggattgccc
>M01687:476:000000000-LL5F5:1:1101:11375:10169_CONS(1) ali_length=67; seq_ab_match=67; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=267.802827368; seq_a_single=0; score_norm=3.9970571249; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
tcattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgtttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:1101:25895:12240_CONS(2) count=2; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=1; ali_length=56; mode=alignment; seq_b_deletion=245; seq_a_deletion=245; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 's'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttccggaagtgcacttccggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1101:11523:12436_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.813159359; seq_a_single=0; score_norm=3.9971690812; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcatgtagggaaagagtgttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:1101:19513:14594_CONS(65) count=65; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=63; mode=alignment; seq_b_deletion=238; seq_a_deletion=238; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatctaacctatgaaactctagttagacttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:1101:21407:15862_CONS(4) count=4; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=64; mode=alignment; seq_b_deletion=237; seq_a_deletion=237; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctattaacgatttattactccgtcgttaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:1101:6525:16108_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=263.780850889; seq_a_single=0; score_norm=3.99667955892; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttctcgactactctcacgccgttcgtcgagcttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:1101:24993:17447_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=230.185355459; seq_a_single=0; score_norm=3.96871302515; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtttctgcacctatccctcgattactctcgggacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1101:5235:19073_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=210.900135023; seq_a_single=0; score_norm=3.97924783063; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacgtatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1101:21720:21568_CONS(1) ali_length=17; seq_ab_match=16; sminR=40.0; seq_a_deletion=284; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=59.3076436138; seq_a_single=0; score_norm=3.48868491846; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=284; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccatggagtctctgccc
>M01687:476:000000000-LL5F5:1:1101:21744:21866_CONS(3) count=3; obiclean_internalcount=0; direction=right; seq_b_single=0; sminR=40.0; obiclean_singletoncount=0; mode=alignment; obiclean_headcount=1; obiclean_samplecount=1; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatc
>M01687:476:000000000-LL5F5:1:1101:19891:22620_CONS(19) count=19; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=81; mode=alignment; seq_b_deletion=220; seq_a_deletion=220; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttcctgctcaaatcgcgatttctcgcttcgctcgaaatgacc
aggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1101:14020:22637_CONS(4) count=4; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; mode=alignment; seq_b_single=0; obiclean_headcount=0; obiclean_samplecount=1; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgtttggctcagg
attgcc
>M01687:476:000000000-LL5F5:1:2115:14116:1394_CONS(1) ali_length=49; seq_ab_match=48; sminR=40.0; seq_a_deletion=252; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=0; score=189.832201242; seq_a_single=0; score_norm=3.87412655596; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=252; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgatctctgcaccttcctttttataggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2115:21485:3347_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgacgatcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2115:18209:3888_CONS(17) count=17; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; ali_length=54; mode=alignment; seq_b_deletion=247; seq_a_deletion=247; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 's'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttccgtcgctgtagacggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2115:22644:8052_CONS(3) count=3; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=58; mode=alignment; seq_b_deletion=243; seq_a_deletion=243; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatcctttccttacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2115:25810:8279_CONS(1) ali_length=70; seq_ab_match=70; sminR=40.0; seq_a_deletion=231; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=277.803308183; seq_a_single=0; score_norm=3.96861868832; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=231; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctcgcaagacctccggcatccgctcgcaaggcttggctc
aggattgccc
>M01687:476:000000000-LL5F5:1:2115:25909:8591_CONS(1) ali_length=67; seq_ab_match=67; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=267.810623798; seq_a_single=0; score_norm=3.99717348953; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgtttggctcagg
attgcac
>M01687:476:000000000-LL5F5:1:2115:9467:8705_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=3; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaattccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2115:12271:9028_CONS(12) count=12; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=20; mode=alignment; seq_b_deletion=281; seq_a_deletion=281; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2115:5248:9131_CONS(9) count=9; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=51; mode=alignment; seq_b_deletion=250; seq_a_deletion=250; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttcctgggaacttggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2115:17361:9667_CONS(10) count=10; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=56; mode=alignment; seq_b_deletion=245; seq_a_deletion=245; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttccattacagcagtgatgacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2115:7747:10711_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.606010747; seq_a_single=0; score_norm=3.99320708184; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=243; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctgctggtttctcaacaggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2115:6723:12540_CONS(17) count=17; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=58; mode=alignment; seq_b_deletion=243; seq_a_deletion=243; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
gggcaatcctgagccaagagcgtcatgtagggaaaggataggtgcagagactcaatgg
>M01687:476:000000000-LL5F5:1:2115:16921:12642_CONS(1) ali_length=57; seq_ab_match=57; sminR=40.0; seq_a_deletion=244; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=227.83597941; seq_a_single=0; score_norm=3.99712244579; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=244; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttcctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2115:25194:13622_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.813487585; seq_a_single=0; score_norm=3.99717405432; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcatcgtgtagggaaagagtgttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:2115:2004:14138_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=3; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctacacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2115:17766:14863_CONS(1) ali_length=110; seq_ab_match=110; sminR=40.0; seq_a_deletion=191; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=439.28696795; seq_a_single=0; score_norm=3.99351789045; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=191; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccgcagtacctgtgatcgcatggacaccctacccatgctc
ttgtgttcgcgcgcgaacactgcccactgcggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2115:16176:15121_CONS(5) count=5; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=58; mode=alignment; seq_b_deletion=243; seq_a_deletion=243; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatcctttccctacatgacgcgcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2115:11844:16061_CONS(1) ali_length=77; seq_ab_match=77; sminR=40.0; seq_a_deletion=224; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=306.929593675; seq_a_single=0; score_norm=3.98609861915; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=224; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccctccgccctaccagcgcgatcgccggcacatcggaagg
cttggctcaggattgcc
>M01687:476:000000000-LL5F5:1:2115:22628:17604_CONS(11) count=11; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=65; mode=alignment; seq_b_deletion=236; seq_a_deletion=236; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctgccttcgttaaaaacaaactaacgaaagattggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:2115:8911:18007_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.832787397; seq_a_single=0; score_norm=3.99711702409; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgacgctcttggctcaggattggcc
>M01687:476:000000000-LL5F5:1:2115:7411:19517_CONS(3) count=3; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; ali_length=126; mode=alignment; seq_b_deletion=175; seq_a_deletion=175; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 's'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctacgaagctatccgctagacagggtgtgtatattccacctgg
aagaagagaagcagaagagaaaagggctgctttagaagaggagcgtcgattggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:2115:6429:21444_CONS(1) ali_length=52; seq_ab_match=52; sminR=40.0; seq_a_deletion=249; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=249; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=7; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctacacgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2115:25112:22239_CONS(1) ali_length=56; seq_ab_match=55; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=1; seq_b_mismatch=0; score=215.312950497; seq_a_single=0; score_norm=3.84487411602; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttctggaactgcagctccagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2115:22148:23781_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=11; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgacactcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2114:19965:3893_CONS(1) ali_length=51; seq_ab_match=51; sminR=40.0; seq_a_deletion=250; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=203.850123154; seq_a_single=0; score_norm=3.99706123831; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=250; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctgtgttacaggcttggctaaggattgccc
>M01687:476:000000000-LL5F5:1:2114:10234:4413_CONS(4) count=4; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=37; mode=alignment; seq_b_deletion=264; seq_a_deletion=264; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttcaggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2114:13960:4571_CONS(1) ali_length=57; seq_ab_match=57; sminR=40.0; seq_a_deletion=244; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=244; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=4; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctttccctacacgacactcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2114:14939:5394_CONS(1) ali_length=56; seq_ab_match=56; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctcaggtgtacccgaggattggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2114:14993:5993_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=3; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgacgctcttgactcaggattgccc
>M01687:476:000000000-LL5F5:1:2114:5169:8796_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.833443849; seq_a_single=0; score_norm=3.99712834222; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgacgctattggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2114:17338:10951_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.846449881; seq_a_single=0; score_norm=3.99710282794; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccggtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2114:9999:11295_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.833772075; seq_a_single=0; score_norm=3.99713400129; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctgctggtttcccaacaggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2114:5301:11748_CONS(3) count=3; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=58; mode=alignment; seq_b_deletion=243; seq_b_mismatch=0; seq_a_deletion=243; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
cattgagtctctgcacctaatttaatcatttaaattaaatcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2114:28092:12050_CONS(6) count=6; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=53; mode=alignment; seq_b_deletion=248; seq_a_deletion=248; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatccgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2114:25586:13557_CONS(7) count=7; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=50; mode=alignment; seq_b_deletion=251; seq_b_mismatch=0; seq_a_deletion=251; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttcctttttataggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2114:11278:13666_CONS(6) count=6; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=1; ali_length=56; mode=alignment; seq_b_deletion=245; seq_a_deletion=245; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 's'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttacaagaatgtattcttgtcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2114:13057:13831_CONS(1) ali_length=74; seq_ab_match=74; sminR=40.0; seq_a_deletion=227; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=227; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=7; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctcgaccctcatggcttgcgccactacatccgaggcttg
gctcaggattgccc
>M01687:476:000000000-LL5F5:1:2114:23245:14996_CONS(1) ali_length=85; seq_ab_match=84; sminR=40.0; seq_a_deletion=216; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=331.790444822; seq_a_single=0; score_norm=3.90341699791; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=216; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttattatcgctttatgaacccatattttcataa
aacaggatttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2114:15773:15299_CONS(1) ali_length=61; seq_ab_match=61; sminR=40.0; seq_a_deletion=240; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=240; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=7; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcaggagattatttatatctcaagcttggctcaggattgcc
c
>M01687:476:000000000-LL5F5:1:2114:9091:15373_CONS(1) ali_length=65; seq_ab_match=65; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=259.816023146; seq_a_single=0; score_norm=3.99716958687; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcgagcctactatttgtccttcggcttgcttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:2114:9821:16315_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.846449881; seq_a_single=0; score_norm=3.99710282794; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccatttagtctctgcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2114:11965:16415_CONS(1) ali_length=98; seq_ab_match=98; sminR=40.0; seq_a_deletion=203; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=391.732349628; seq_a_single=0; score_norm=3.99726887375; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=203; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttctttttattattctcgcttgctgaacctttgtttt
tttttcgtaaaataataggatttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2114:3313:18654_CONS(3) count=3; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; ali_length=107; mode=alignment; seq_b_deletion=194; seq_a_deletion=194; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 's'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatccttttgtattcttattctgtctttatgaacctttgttt
gtttttttgtttgttttcgaaaaataggatttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2114:14558:19468_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=251.821094269; seq_a_single=0; score_norm=3.99716022649; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcacactctttccctacacaacgatcttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:2114:26495:20130_CONS(1) ali_length=78; seq_ab_match=66; sminR=40.0; seq_a_deletion=223; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=6; seq_b_mismatch=6; score=195.672294714; seq_a_single=0; score_norm=2.508619163; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=223; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttctttatgaacccttgtttt
>M01687:476:000000000-LL5F5:1:2114:11912:21603_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=251.819177731; seq_a_single=0; score_norm=3.99712980526; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtttctgcaccttctggcctactattgtcctcgaccagcttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:2114:15393:22343_CONS(1) ali_length=66; seq_ab_match=65; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=254.786641422; seq_a_single=0; score_norm=3.86040365791; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagttctgcacctatcggaagagcgtcgtgtagggaaagagtgtttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:2114:23137:23642_CONS(1) ali_length=64; seq_ab_match=63; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=0; score=247.690285857; seq_a_single=0; score_norm=3.87016071652; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttaccgatttattactccgtcgttaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:2113:10933:1094_CONS(1) ali_length=59; seq_ab_match=56; sminR=40.0; seq_a_deletion=242; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=3; seq_b_mismatch=0; score=206.396774323; seq_a_single=0; score_norm=3.49825041225; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=242; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctaatttaatcatttaaattaaatcatggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2113:9372:1710_CONS(1) ali_length=67; seq_ab_match=66; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=0; score=260.411158463; seq_a_single=0; score_norm=3.88673370841; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcttagctacctttttatcatttcactaagcttggctcagt
attgccc
>M01687:476:000000000-LL5F5:1:2113:9373:1729_CONS(1) ali_length=67; seq_ab_match=66; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=0; score=258.04643724; seq_a_single=0; score_norm=3.85143936179; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagactctgcaccttcttagctacctttttatcatttcactaagcttggctcagt
attgccc
>M01687:476:000000000-LL5F5:1:2113:16954:2286_CONS(2) count=2; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=65; mode=alignment; seq_b_deletion=236; seq_b_mismatch=0; seq_a_deletion=236; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
tcattgagtctctgcaccttcaagcctactatttgtccttcggcttgcttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:2113:6544:4900_CONS(1) ali_length=53; seq_ab_match=51; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=2; score=190.125026602; seq_a_single=0; score_norm=3.58726465287; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctga
>M01687:476:000000000-LL5F5:1:2113:7411:5059_CONS(6) count=6; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=56; mode=alignment; seq_b_deletion=245; seq_a_deletion=245; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatctttcctacacggcgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2113:13333:5966_CONS(8) count=8; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; ali_length=163; mode=alignment; seq_b_deletion=138; seq_a_deletion=138; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 's'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatcgcttatcataccaactatagctttcgctaccctttcgg
tttgtggtctggactttctctttaccatagactttcgtctttaggtatgccctgttaatt
ctctacaccttccttgtttccaaggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2113:26784:6455_CONS(1) ali_length=64; seq_ab_match=64; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=255.761027682; seq_a_single=0; score_norm=3.99626605753; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttaacgatttattactccgtcgttaacttggctctggatt
gccc
>M01687:476:000000000-LL5F5:1:2113:21700:6866_CONS(1) ali_length=36; seq_ab_match=36; sminR=40.0; seq_a_deletion=265; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=143.889554421; seq_a_single=0; score_norm=3.99693206724; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=265; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctccaaggattgccc
>M01687:476:000000000-LL5F5:1:2113:9374:7415_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.825502131; seq_a_single=0; score_norm=3.99699141605; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccccacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2113:22995:9806_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=263.813159359; seq_a_single=0; score_norm=3.9971690812; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcccggctaccatacgccccttcgccgggcttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:2113:15251:10464_CONS(2) count=2; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=67; mode=alignment; seq_b_deletion=234; seq_a_deletion=234; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatcagaagagcgtcgtgtagggaaagagtgtttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:2113:3675:10519_CONS(1) ali_length=52; seq_ab_match=52; sminR=40.0; seq_a_deletion=249; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=207.828733827; seq_a_single=0; score_norm=3.99670641974; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=249; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagttctgcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2113:26712:12244_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=6; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccaatcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2113:14554:13320_CONS(1) ali_length=77; seq_ab_match=77; sminR=40.0; seq_a_deletion=224; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=307.780498586; seq_a_single=0; score_norm=3.99714933229; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=224; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagaacacagatcggaagagcacagatcggaagagc
acagatcggaagagccc
>M01687:476:000000000-LL5F5:1:2113:22111:13606_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=8; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcagccgcggtctggtcagacaacggttgcttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:2113:11167:14661_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=206.921130674; seq_a_single=0; score_norm=3.90417227687; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcttcttcctacgaagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2113:2977:15962_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=3; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgtacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2113:4704:16809_CONS(1) ali_length=56; seq_ab_match=56; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=245; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=3; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccgggagtgtacccccggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2113:9528:22117_CONS(1) ali_length=81; seq_ab_match=81; sminR=40.0; seq_a_deletion=220; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=323.775125942; seq_a_single=0; score_norm=3.99722377706; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=220; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctgctcaaatcgcgatttctcgtttcgctcgaaatgacc
aggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2113:18320:23093_CONS(8) count=8; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; mode=alignment; seq_b_single=0; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcac
>M01687:476:000000000-LL5F5:1:2113:18589:24507_CONS(1) ali_length=65; seq_ab_match=65; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=259.814710453; seq_a_single=0; score_norm=3.99714939158; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcaagcctactatttgtccttcggcttgcttggttcaggat
tgccc
>M01687:476:000000000-LL5F5:1:2112:13481:2136_CONS(6) count=6; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=27; mode=alignment; seq_b_deletion=274; seq_a_deletion=274; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgctcaggattgccc
>M01687:476:000000000-LL5F5:1:2112:17152:2994_CONS(1) ali_length=85; seq_ab_match=64; sminR=40.0; seq_a_deletion=216; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=5; seq_b_mismatch=16; score=157.732903498; seq_a_single=0; score_norm=1.85568121763; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=216; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttttt
>M01687:476:000000000-LL5F5:1:2112:25951:4412_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.812831133; seq_a_single=0; score_norm=3.99716410808; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgttggctcacga
ttgccc
>M01687:476:000000000-LL5F5:1:2112:19488:4694_CONS(1) ali_length=61; seq_ab_match=61; sminR=40.0; seq_a_deletion=240; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=240; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=4; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctctttccatacacgacactctttggctcaggattgcc
c
>M01687:476:000000000-LL5F5:1:2112:5852:5026_CONS(2) count=2; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=52; mode=alignment; seq_b_deletion=249; seq_b_mismatch=1; seq_a_deletion=249; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatctgaactcagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2112:22349:5834_CONS(1) ali_length=64; seq_ab_match=64; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=3; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttaacgatttattactccgccgttaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:2112:17766:9514_CONS(1) ali_length=74; seq_ab_match=74; sminR=40.0; seq_a_deletion=227; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=295.79147698; seq_a_single=0; score_norm=3.99718212136; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=227; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttctgacctaccgatcttgcgatcatcctttcagtcagcttg
gctcaagattgccc
>M01687:476:000000000-LL5F5:1:2112:13516:9857_CONS(1) ali_length=65; seq_ab_match=65; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=259.815694921; seq_a_single=0; score_norm=3.99716453724; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcaagcctactatttgtccgtcggcttgcttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:2112:5114:10826_CONS(1) ali_length=62; seq_ab_match=62; sminR=40.0; seq_a_deletion=239; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=246.807320694; seq_a_single=0; score_norm=3.98076323699; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=239; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagctctgcaccttctggcctactattgtcctcgaccagcttggctcaggattgc
cc
>M01687:476:000000000-LL5F5:1:2112:24584:12132_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.846449881; seq_a_single=0; score_norm=3.99710282794; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagtcacttggttcaggattgccc
>M01687:476:000000000-LL5F5:1:2112:28879:13102_CONS(1) ali_length=67; seq_ab_match=67; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=267.810623798; seq_a_single=0; score_norm=3.99717348953; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtccctgcacctatcggaagagcgtcgtgtagggaaagagtgtttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:2112:24169:13997_CONS(1) ali_length=49; seq_ab_match=49; sminR=40.0; seq_a_deletion=252; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=195.221875018; seq_a_single=0; score_norm=3.98411989832; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=252; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctaactgaactccagttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2112:13811:15214_CONS(1) ali_length=67; seq_ab_match=67; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=267.810952024; seq_a_single=0; score_norm=3.99717838842; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaaaaagtgtttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:2112:22687:15521_CONS(1) ali_length=115; seq_ab_match=98; sminR=40.0; seq_a_deletion=192; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=10; seq_b_mismatch=1; score=240.237028338; seq_a_single=0; score_norm=2.08901763772; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=186; obiclean_headcount=0; seq_a_insertion=6; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgtt
>M01687:476:000000000-LL5F5:1:2112:19173:20011_CONS(1) ali_length=79; seq_ab_match=79; sminR=40.0; seq_a_deletion=222; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=315.78052529; seq_a_single=0; score_norm=3.99722183911; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=222; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttttttctgaacctttgtttgttttcggaaaacagg
atttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2112:7463:22706_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.846449881; seq_a_single=0; score_norm=3.99710282794; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagtcacttgactcaggattgccc
>M01687:476:000000000-LL5F5:1:2111:18849:2430_CONS(1) ali_length=58; seq_ab_match=57; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=224.090051984; seq_a_single=0; score_norm=3.86362158593; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgacgctctttgctcaggattgcc
>M01687:476:000000000-LL5F5:1:2111:17359:4121_CONS(1) ali_length=49; seq_ab_match=49; sminR=40.0; seq_a_deletion=252; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=195.856592125; seq_a_single=0; score_norm=3.99707330868; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=252; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaaccccagttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2111:23635:6003_CONS(1) ali_length=80; seq_ab_match=66; sminR=40.0; seq_a_deletion=222; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=1; seq_b_mismatch=8; score=172.45972248; seq_a_single=0; score_norm=2.155746531; obiclean_internalcount=0; direction=right; seq_b_insertion=4; obiclean_head=True; seq_b_deletion=225; obiclean_headcount=0; seq_a_insertion=1; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttatctgaacccttgt
>M01687:476:000000000-LL5F5:1:2111:5259:6501_CONS(1) ali_length=83; seq_ab_match=60; sminR=40.0; seq_a_deletion=219; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=3; seq_b_mismatch=9; score=103.387396897; seq_a_single=0; score_norm=1.24563128791; obiclean_internalcount=1; direction=right; seq_b_insertion=10; obiclean_head=False; seq_b_deletion=228; obiclean_headcount=0; seq_a_insertion=1; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctt
>M01687:476:000000000-LL5F5:1:2111:15196:6669_CONS(1) ali_length=58; seq_ab_match=57; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=224.059680545; seq_a_single=0; score_norm=3.86309794044; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=243; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcccaacattttcacattgggcttggctcaggattgcc
>M01687:476:000000000-LL5F5:1:2111:10074:7137_CONS(1) ali_length=117; seq_ab_match=95; sminR=40.0; seq_a_deletion=188; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=14; seq_b_mismatch=4; score=222.193886624; seq_a_single=0; score_norm=1.89909304807; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=184; obiclean_headcount=0; seq_a_insertion=4; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
gcattgagtctctgcacctatcggaggagcgtcgtgtagggaaagagtgt
>M01687:476:000000000-LL5F5:1:2111:19554:7496_CONS(1) ali_length=67; seq_ab_match=67; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=267.174646605; seq_a_single=0; score_norm=3.98768129261; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcatcgtgtagggaaagagtgtttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:2111:25546:7826_CONS(7) count=7; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=108; mode=alignment; seq_b_deletion=193; seq_a_deletion=193; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatcctttccctacatgacgctcttccgatctccattgagtc
tctgcacctatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2111:25667:8776_CONS(1) ali_length=50; seq_ab_match=50; sminR=40.0; seq_a_deletion=251; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=199.854056564; seq_a_single=0; score_norm=3.99708113128; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=251; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttctctttttagagtttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2111:4690:9064_CONS(1) ali_length=61; seq_ab_match=45; sminR=40.0; seq_a_deletion=240; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=8; seq_b_mismatch=8; score=104.37019087; seq_a_single=0; score_norm=1.71098673557; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=240; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttc
>M01687:476:000000000-LL5F5:1:2111:9027:9982_CONS(3) count=3; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; mode=alignment; seq_b_single=0; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatctgaactccagtcacttggctcaggattgcc
>M01687:476:000000000-LL5F5:1:2111:16070:10941_CONS(1) ali_length=56; seq_ab_match=56; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=223.838843197; seq_a_single=0; score_norm=3.99712219995; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccggaggtgtacctccggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2111:14833:14702_CONS(1) ali_length=108; seq_ab_match=108; sminR=40.0; seq_a_deletion=193; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=193; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=12; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacacgacgctcttccgatctccattgagtc
tctgcacctatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2111:3329:15047_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=202.645859976; seq_a_single=0; score_norm=3.82350679201; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaact
>M01687:476:000000000-LL5F5:1:2111:23362:16253_CONS(1) ali_length=59; seq_ab_match=57; sminR=40.0; seq_a_deletion=242; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=1; score=220.052851361; seq_a_single=0; score_norm=3.7297093451; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=242; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccatttagtctctgcacctaatttaatcatttaaattaaatcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2111:22063:17235_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.728260587; seq_a_single=0; score_norm=3.99588273617; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccatcgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:2111:16012:19541_CONS(1) ali_length=56; seq_ab_match=56; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=3; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccgcgaaaacatccgcggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2111:22875:20965_CONS(1) ali_length=63; seq_ab_match=62; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=244.012444551; seq_a_single=0; score_norm=3.87321340557; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagttctgcaccttttaacgatttattactccgtcgttaacttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:2111:13710:23471_CONS(2) count=2; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=1; ali_length=88; mode=alignment; seq_b_deletion=213; seq_a_deletion=213; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 's'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatcctgttttagtctgtctttatgaatcttttttgttttcg
gaaaacaggatttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2111:22818:24920_CONS(1) ali_length=78; seq_ab_match=78; sminR=40.0; seq_a_deletion=223; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=223; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=9; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcagagccagatggccaggaactcgttgccgccaatatcg
cccgcgactactaagccc
>M01687:476:000000000-LL5F5:1:2110:16672:3306_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.812089696; seq_a_single=0; score_norm=3.99715287418; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaacgagtgttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:2110:12079:7783_CONS(1) ali_length=65; seq_ab_match=65; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=259.794647409; seq_a_single=0; score_norm=3.99684072936; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtcttgcacctatcggaagagcgtcgtgtagggaaagagtgttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:2110:25183:7792_CONS(1) ali_length=50; seq_ab_match=50; sminR=40.0; seq_a_deletion=251; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=251; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=8; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttctctttttagagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2110:8045:10072_CONS(2) count=2; obiclean_internalcount=0; direction=right; seq_b_single=0; sminR=40.0; obiclean_singletoncount=0; mode=alignment; obiclean_headcount=1; obiclean_samplecount=1; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatccttttttattct
>M01687:476:000000000-LL5F5:1:2110:19418:10781_CONS(4) count=4; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=53; mode=alignment; seq_b_deletion=248; seq_a_deletion=248; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatcagaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2110:17343:15725_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtccctgcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2110:17646:16395_CONS(1) ali_length=66; seq_ab_match=65; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=0; score=240.283633337; seq_a_single=0; score_norm=3.64066111117; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaag
>M01687:476:000000000-LL5F5:1:2110:27266:17114_CONS(1) ali_length=81; seq_ab_match=81; sminR=40.0; seq_a_deletion=220; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=323.774384504; seq_a_single=0; score_norm=3.99721462351; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=220; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctgctcaaatcgcgatttctcgcttcgctcgaaatgacc
gggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2110:7749:17853_CONS(1) ali_length=67; seq_ab_match=67; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=266.190036142; seq_a_single=0; score_norm=3.97298561406; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggatgagcgtcgtgtagggaaagagtgtttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:2110:14007:18036_CONS(1) ali_length=56; seq_ab_match=56; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=223.838186745; seq_a_single=0; score_norm=3.99711047759; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccgcgaaaaacatccgcggcttggctaggattgccc
>M01687:476:000000000-LL5F5:1:2110:19424:21789_CONS(1) ali_length=78; seq_ab_match=61; sminR=40.0; seq_a_deletion=223; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=6; seq_b_mismatch=11; score=160.321945901; seq_a_single=0; score_norm=2.05540956283; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=223; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttctttctgaacctttgt
>M01687:476:000000000-LL5F5:1:2109:18138:5252_CONS(1) ali_length=108; seq_ab_match=107; sminR=40.0; seq_a_deletion=193; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=1; seq_b_mismatch=0; score=410.99611597; seq_a_single=0; score_norm=3.80551959231; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=193; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacacgacgctctt
>M01687:476:000000000-LL5F5:1:2109:10993:6224_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=4; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgatgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2109:8011:7012_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.374037933; seq_a_single=0; score_norm=3.99051572626; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgccgtgtagggaaagagtgttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:2109:14889:8702_CONS(1) ali_length=50; seq_ab_match=50; sminR=40.0; seq_a_deletion=251; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=199.854056564; seq_a_single=0; score_norm=3.99708113128; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=251; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccctttttagggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2109:12031:9095_CONS(1) ali_length=52; seq_ab_match=51; sminR=40.0; seq_a_deletion=249; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=0; score=200.0604903; seq_a_single=0; score_norm=3.84731712116; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=249; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagtcacttggctcggattgccc
>M01687:476:000000000-LL5F5:1:2109:22543:10689_CONS(1) ali_length=57; seq_ab_match=56; sminR=40.0; seq_a_deletion=244; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=220.032242174; seq_a_single=0; score_norm=3.86021477498; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=244; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattagtctctgcacctatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2109:15162:11974_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.177182166; seq_a_single=0; score_norm=3.98753306312; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccatttagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:2109:4173:12817_CONS(1) ali_length=85; seq_ab_match=61; sminR=40.0; seq_a_deletion=216; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=11; seq_b_mismatch=13; score=131.028400251; seq_a_single=0; score_norm=1.54151059119; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=216; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttctttt
>M01687:476:000000000-LL5F5:1:2109:7227:13809_CONS(2) count=2; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=58; mode=alignment; seq_b_deletion=243; seq_a_deletion=243; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctat
>M01687:476:000000000-LL5F5:1:2109:17877:17627_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=243; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcacaacattttcacattgggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2109:17915:18793_CONS(2) count=2; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=64; mode=alignment; seq_b_deletion=237; seq_a_deletion=237; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcaccttttaacgatttattacttcgtcgttaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:2109:11823:20602_CONS(1) ali_length=54; seq_ab_match=54; sminR=40.0; seq_a_deletion=247; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=215.841669556; seq_a_single=0; score_norm=3.99706795474; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=247; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattagtctctgcacttacaagaatgtattcttgtcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2109:10684:21529_CONS(1) ali_length=52; seq_ab_match=52; sminR=40.0; seq_a_deletion=249; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=207.847672538; seq_a_single=0; score_norm=3.99707062573; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=249; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagtcacttggccaggattgccc
>M01687:476:000000000-LL5F5:1:2109:15582:24714_CONS(3) count=3; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=49; mode=alignment; seq_b_deletion=252; seq_a_deletion=252; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatctgaactccaattggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2108:7091:5196_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.157481728; seq_a_single=0; score_norm=3.98547382289; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgacgctcttggctctggattgccc
>M01687:476:000000000-LL5F5:1:2108:6481:6785_CONS(3) count=3; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=66; mode=alignment; seq_b_deletion=235; seq_a_deletion=235; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatcggaagagtgtcgtgtagggaaagagtgttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:2108:23068:8266_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=251.316304817; seq_a_single=0; score_norm=3.98914769551; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtcctgcaccttttaacgatttattactccgtcgttaacttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:2108:26468:10176_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.844723765; seq_a_single=0; score_norm=3.99707025972; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
acattgagtctctgcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2108:11098:10884_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.833772075; seq_a_single=0; score_norm=3.99713400129; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacccatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2108:15462:11308_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.080478592; seq_a_single=0; score_norm=3.98606785746; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcgaaagagcgtcgtgtagggaaagagtgttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:2108:10722:11420_CONS(1) ali_length=66; seq_ab_match=62; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=1; seq_b_mismatch=3; score=221.196534662; seq_a_single=0; score_norm=3.35146264639; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagag
>M01687:476:000000000-LL5F5:1:2108:14993:11877_CONS(1) ali_length=108; seq_ab_match=108; sminR=40.0; seq_a_deletion=193; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=193; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacacgacgctcttccgatctccattgagtc
tctacacctatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2108:26933:12212_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctacctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2108:28934:13183_CONS(1) ali_length=57; seq_ab_match=57; sminR=40.0; seq_a_deletion=244; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=227.833321434; seq_a_single=0; score_norm=3.99707581464; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=244; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctcagacgtgtgctcttccgatttccattgagtcttgccc
>M01687:476:000000000-LL5F5:1:2108:2245:14510_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtaaggaaagagtgttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:2108:20301:16766_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.831389507; seq_a_single=0; score_norm=3.99709292254; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgacgctcttggctcaggattgtcc
>M01687:476:000000000-LL5F5:1:2108:10375:18950_CONS(8) count=8; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=61; mode=alignment; seq_b_deletion=240; seq_b_mismatch=0; seq_a_deletion=240; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatcctctttccatacacgacgctctttggctcaggattgcc
c
>M01687:476:000000000-LL5F5:1:2108:8731:18983_CONS(1) ali_length=62; seq_ab_match=62; sminR=40.0; seq_a_deletion=239; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=242.614357656; seq_a_single=0; score_norm=3.9131348009; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=239; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctaacctatgaaactctagttagacttggctcagattgc
cc
>M01687:476:000000000-LL5F5:1:2108:20089:19031_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.846121655; seq_a_single=0; score_norm=3.99709663499; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagtcacttagctcaggattgccc
>M01687:476:000000000-LL5F5:1:2108:5997:20224_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaacttcagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2106:9625:6572_CONS(3) count=3; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; mode=alignment; seq_b_single=0; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatcct
>M01687:476:000000000-LL5F5:1:2106:3812:6862_CONS(1) ali_length=49; seq_ab_match=49; sminR=40.0; seq_a_deletion=252; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=195.221875018; seq_a_single=0; score_norm=3.98411989832; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=252; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagttgcctcaggattgccc
>M01687:476:000000000-LL5F5:1:2106:10454:7204_CONS(1) ali_length=64; seq_ab_match=63; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=247.110663974; seq_a_single=0; score_norm=3.86110412459; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcaagcctactattgtccttcggcttgcttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:2106:23958:9502_CONS(2) count=2; obiclean_internalcount=1; direction=right; seq_b_single=0; sminR=40.0; obiclean_singletoncount=0; mode=alignment; obiclean_headcount=0; obiclean_samplecount=1; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatccttttg
>M01687:476:000000000-LL5F5:1:2106:14994:10112_CONS(1) ali_length=108; seq_ab_match=108; sminR=40.0; seq_a_deletion=193; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=431.696211385; seq_a_single=0; score_norm=3.99718714245; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=193; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacacgacgctcttccgatctccattgagtc
tctgtacctatcctttccctacatgacgcccttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2106:29161:13562_CONS(1) ali_length=64; seq_ab_match=64; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=255.660348349; seq_a_single=0; score_norm=3.99469294295; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctacaccttttaacgatttattactccgtcgttaactcggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:2106:25223:15232_CONS(1) ali_length=83; seq_ab_match=57; sminR=40.0; seq_a_deletion=220; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=11; seq_b_mismatch=13; score=82.9433139795; seq_a_single=0; score_norm=0.999317035898; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=218; obiclean_headcount=0; seq_a_insertion=2; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttttttt
>M01687:476:000000000-LL5F5:1:2106:3531:17307_CONS(1) ali_length=84; seq_ab_match=84; sminR=40.0; seq_a_deletion=217; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=334.126256609; seq_a_single=0; score_norm=3.97769353106; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=217; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcccagttactacagcggtctcattaaccgctgtgccattc
gctgggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2106:23829:17715_CONS(1) ali_length=66; seq_ab_match=61; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=3; seq_b_mismatch=2; score=212.530063507; seq_a_single=0; score_norm=3.22015247738; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcg
>M01687:476:000000000-LL5F5:1:2106:17429:17857_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=211.285503261; seq_a_single=0; score_norm=3.98651892945; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
gggcaatcctgagccaagtgactggagttcagataggtgcagagactcaatgg
>M01687:476:000000000-LL5F5:1:2106:6708:23771_CONS(1) ali_length=61; seq_ab_match=61; sminR=40.0; seq_a_deletion=240; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=238.26499444; seq_a_single=0; score_norm=3.90598351542; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=240; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcag
>M01687:476:000000000-LL5F5:1:2106:16583:24900_CONS(1) ali_length=85; seq_ab_match=58; sminR=40.0; seq_a_deletion=217; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=6; seq_b_mismatch=19; score=82.9755741604; seq_a_single=0; score_norm=0.976183225416; obiclean_internalcount=1; direction=right; seq_b_insertion=1; obiclean_head=False; seq_b_deletion=217; obiclean_headcount=0; seq_a_insertion=1; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttgtattat
>M01687:476:000000000-LL5F5:1:2107:19064:5824_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.81151823; seq_a_single=0; score_norm=3.9971442156; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgtttggctcagg
ttgccc
>M01687:476:000000000-LL5F5:1:2107:11226:8080_CONS(1) ali_length=90; seq_ab_match=90; sminR=40.0; seq_a_deletion=211; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=359.715805789; seq_a_single=0; score_norm=3.99684228655; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=211; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttattttcggtttatgaaacccttgtttatttt
cataaaacaggatttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2107:22903:9000_CONS(1) ali_length=67; seq_ab_match=66; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=249.966913428; seq_a_single=0; score_norm=3.73084945415; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtggtgtagggaaagagtgtttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:2107:13833:10147_CONS(1) ali_length=52; seq_ab_match=52; sminR=40.0; seq_a_deletion=249; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=207.815510134; seq_a_single=0; score_norm=3.99645211797; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=249; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2107:14816:10193_CONS(1) ali_length=62; seq_ab_match=62; sminR=40.0; seq_a_deletion=239; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=247.801551637; seq_a_single=0; score_norm=3.99679921994; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=239; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagttctgcacctatctaacctatgaaactctagttagacttggctcaggattgc
cc
>M01687:476:000000000-LL5F5:1:2107:13366:10261_CONS(3) count=3; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=67; mode=alignment; seq_b_deletion=234; seq_a_deletion=234; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttcttagctacctttttatcatttcactaagcttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:2107:11720:10363_CONS(1) ali_length=79; seq_ab_match=79; sminR=40.0; seq_a_deletion=222; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=314.683808198; seq_a_single=0; score_norm=3.98333934428; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=222; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttgcggactacccgaacaaagtgttcgtcaccatttcgtccg
acttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2107:8333:16074_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.813487585; seq_a_single=0; score_norm=3.99717405432; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=235; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ctattgagtctctgcacctatcggaagagcgtcgtgtagggaatgagtgttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:2107:23934:16978_CONS(1) ali_length=61; seq_ab_match=61; sminR=40.0; seq_a_deletion=240; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=243.823264176; seq_a_single=0; score_norm=3.9971026914; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=240; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctctttccatacacaacgctctttggctcaggattgcc
c
>M01687:476:000000000-LL5F5:1:2107:8902:20216_CONS(1) ali_length=67; seq_ab_match=67; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=267.809967346; seq_a_single=0; score_norm=3.99716369174; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgttgtgtagggaaagagtgtttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:2107:16431:23040_CONS(1) ali_length=64; seq_ab_match=64; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=255.269363215; seq_a_single=0; score_norm=3.98858380024; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=237; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttaacgatttattactccgtcgttaacttggctcaggatt
atcc
>M01687:476:000000000-LL5F5:1:2107:16449:23044_CONS(1) ali_length=64; seq_ab_match=64; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=255.266248009; seq_a_single=0; score_norm=3.98853512515; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttaacgatttattactccgtcgttaacttggctcaggatt
gtcc
>M01687:476:000000000-LL5F5:1:2107:9063:24581_CONS(1) ali_length=28; seq_ab_match=27; sminR=40.0; seq_a_deletion=273; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=0; score=103.915870366; seq_a_single=0; score_norm=3.71128108449; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=273; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2104:21970:12493_CONS(1) ali_length=54; seq_ab_match=54; sminR=40.0; seq_a_deletion=247; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=215.843586093; seq_a_single=0; score_norm=3.99710344618; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=247; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcccctacacgacactcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2104:16660:13799_CONS(1) ali_length=78; seq_ab_match=60; sminR=40.0; seq_a_deletion=223; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=6; seq_b_mismatch=12; score=150.320821495; seq_a_single=0; score_norm=1.92719001916; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=223; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttctt
>M01687:476:000000000-LL5F5:1:2104:7421:14340_CONS(1) ali_length=61; seq_ab_match=61; sminR=40.0; seq_a_deletion=240; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=243.808159885; seq_a_single=0; score_norm=3.99685508008; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=240; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctacaggagattatttatatctcaagcttggctcaggattgcc
c
>M01687:476:000000000-LL5F5:1:2104:21459:14659_CONS(1) ali_length=91; seq_ab_match=87; sminR=40.0; seq_a_deletion=210; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=4; score=317.670888379; seq_a_single=0; score_norm=3.49088888329; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=210; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttcctttgtattctagttcgagaac
>M01687:476:000000000-LL5F5:1:2104:11681:16482_CONS(1) ali_length=67; seq_ab_match=67; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=3; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcatgtagggaaagagtgtttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:2104:5803:16532_CONS(4) count=4; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; mode=alignment; seq_b_single=0; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccta
>M01687:476:000000000-LL5F5:1:2104:27753:18272_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttcccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2104:23189:19657_CONS(1) ali_length=59; seq_ab_match=58; sminR=40.0; seq_a_deletion=242; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=1; score=214.517258406; seq_a_single=0; score_norm=3.63588573569; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=242; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctaatttaatca
>M01687:476:000000000-LL5F5:1:2104:9567:21368_CONS(1) ali_length=37; seq_ab_match=37; sminR=40.0; seq_a_deletion=264; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=264; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcaggttcaggattgccc
>M01687:476:000000000-LL5F5:1:2104:11376:24216_CONS(1) ali_length=52; seq_ab_match=50; sminR=40.0; seq_a_deletion=249; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=2; score=189.686805299; seq_a_single=0; score_norm=3.64782317882; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=249; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttctctattctctgagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2104:21852:24302_CONS(1) ali_length=61; seq_ab_match=61; sminR=40.0; seq_a_deletion=240; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=240; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctctttccatacatgacgctctttggctcaggattgcc
c
>M01687:476:000000000-LL5F5:1:2105:12460:1317_CONS(1) ali_length=56; seq_ab_match=56; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=223.838843197; seq_a_single=0; score_norm=3.99712219995; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccatcacagcagtgatgacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2105:22159:5287_CONS(2) count=2; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=1; ali_length=64; mode=alignment; seq_b_deletion=237; seq_a_deletion=237; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 's'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctttt
>M01687:476:000000000-LL5F5:1:2105:17998:6700_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.846449881; seq_a_single=0; score_norm=3.99710282794; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccactcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2105:12221:11838_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.764324637; seq_a_single=0; score_norm=3.99593663168; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgacgctcttggctaaggattgccc
>M01687:476:000000000-LL5F5:1:2105:19588:13266_CONS(1) ali_length=83; seq_ab_match=59; sminR=40.0; seq_a_deletion=222; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=2; seq_b_mismatch=14; score=110.538146181; seq_a_single=0; score_norm=1.33178489375; obiclean_internalcount=0; direction=right; seq_b_insertion=4; obiclean_head=True; seq_b_deletion=222; obiclean_headcount=1; seq_a_insertion=4; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctt
>M01687:476:000000000-LL5F5:1:2105:3948:13320_CONS(1) ali_length=61; seq_ab_match=61; sminR=40.0; seq_a_deletion=240; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=243.766248446; seq_a_single=0; score_norm=3.9961680073; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=240; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctctttccctacacgacgctctttggctcaggattgcc
c
>M01687:476:000000000-LL5F5:1:2105:3542:18362_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=243; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccctcgattactctcgggacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2105:14188:18983_CONS(1) ali_length=77; seq_ab_match=77; sminR=40.0; seq_a_deletion=224; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=224; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=4; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcacagatcggaagagcacagatcggaagagc
acagatcggaagagccc
>M01687:476:000000000-LL5F5:1:2105:6949:18994_CONS(1) ali_length=65; seq_ab_match=64; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=244.543062939; seq_a_single=0; score_norm=3.76220096829; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtaggaaagagtgttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:2105:24189:23387_CONS(2) count=2; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=67; mode=alignment; seq_b_deletion=234; seq_a_deletion=234; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatcggaa
>M01687:476:000000000-LL5F5:1:2105:18755:24330_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgacgctcttggttcaggattgccc
>M01687:476:000000000-LL5F5:1:2102:15377:5281_CONS(1) ali_length=81; seq_ab_match=81; sminR=40.0; seq_a_deletion=220; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=323.774384504; seq_a_single=0; score_norm=3.99721462351; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=220; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctgctcaaatcgcgatttctcgcttcgctcgaattgacc
aggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2102:18147:5409_CONS(1) ali_length=56; seq_ab_match=56; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttacagcgatgtatcgctgtcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2102:5818:7386_CONS(1) ali_length=65; seq_ab_match=65; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=259.710262919; seq_a_single=0; score_norm=3.99554250645; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgtggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:2102:26007:7696_CONS(2) count=2; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; mode=alignment; seq_b_single=0; obiclean_headcount=1; seq_a_insertion=0; obiclean_samplecount=1; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatcgg
>M01687:476:000000000-LL5F5:1:2102:15646:8335_CONS(1) ali_length=64; seq_ab_match=64; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=255.816917578; seq_a_single=0; score_norm=3.99713933716; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcacactctttccctacacgacactctttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:2102:9255:8339_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=251.819039927; seq_a_single=0; score_norm=3.99712761789; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcacactctttccccacacgacgcttttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:2102:6786:11465_CONS(2) count=2; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; mode=alignment; seq_a_deletion=216; obiclean_headcount=1; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatccttttttatt
>M01687:476:000000000-LL5F5:1:2102:17930:16035_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.846121655; seq_a_single=0; score_norm=3.99709663499; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctttctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2102:9707:20534_CONS(1) ali_length=95; seq_ab_match=95; sminR=40.0; seq_a_deletion=206; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=378.387360778; seq_a_single=0; score_norm=3.9830248503; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=206; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttagtattcttattctgtctttatgaacctttgttt
gttttcgaaaaataggatttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2102:17504:21116_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=251.821094269; seq_a_single=0; score_norm=3.99716022649; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctaacctacgaaactctagttagacttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:2102:17498:22973_CONS(1) ali_length=49; seq_ab_match=49; sminR=40.0; seq_a_deletion=252; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=252; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagatggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2103:23827:4513_CONS(1) ali_length=58; seq_ab_match=56; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=1; score=212.502208673; seq_a_single=0; score_norm=3.66383118401; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctccacctatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2103:23936:5039_CONS(1) ali_length=85; seq_ab_match=83; sminR=40.0; seq_a_deletion=216; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=2; seq_b_mismatch=0; score=308.000968013; seq_a_single=0; score_norm=3.62354080016; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=216; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctacacctatccttttttattatc
>M01687:476:000000000-LL5F5:1:2103:9804:5370_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgacgctcctggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2103:17478:12943_CONS(1) ali_length=67; seq_ab_match=67; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=267.80963912; seq_a_single=0; score_norm=3.99715879284; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgcttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:2103:8294:17591_CONS(1) ali_length=100; seq_ab_match=84; sminR=40.0; seq_a_deletion=201; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=5; seq_b_mismatch=11; score=251.66504025; seq_a_single=0; score_norm=2.5166504025; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=201; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttattctcgctttatgaaccctt
>M01687:476:000000000-LL5F5:1:2103:7611:19349_CONS(3) count=3; obiclean_internalcount=0; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=1; ali_length=69; mode=alignment; seq_b_deletion=232; seq_b_mismatch=0; seq_a_deletion=232; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 's'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcaccttcctggctacttgctgcttacccttcgccaggcttggctca
ggattgccc
>M01687:476:000000000-LL5F5:1:2103:13383:21151_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=6; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctttctaacctatgaaactctagttagacttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:2103:7195:23766_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.798586348; seq_a_single=0; score_norm=3.996948278; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgttggctcaaga
ttgccc
>M01687:476:000000000-LL5F5:1:2103:20035:24420_CONS(1) ali_length=93; seq_ab_match=93; sminR=40.0; seq_a_deletion=208; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=208; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=5; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttttttattcttgctttcttctgaacccttatttgt
tttcgtaaaataggatttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2116:8904:2101_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=6; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatttgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2116:14858:5467_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.087038365; seq_a_single=0; score_norm=3.98277430878; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcatctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2116:7437:6836_CONS(1) ali_length=55; seq_ab_match=55; sminR=40.0; seq_a_deletion=246; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=219.769451238; seq_a_single=0; score_norm=3.99580820433; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=246; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ctattgagtcttgcaccttcttacggtataccgtaagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2116:13980:7564_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.813487585; seq_a_single=0; score_norm=3.99717405432; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagaacgtcgtgtagggaaagagtgttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:2116:9915:8228_CONS(1) ali_length=65; seq_ab_match=65; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=3; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcaagcctactatttatccttcggcttgcttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:2116:18303:8713_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.1966724; seq_a_single=0; score_norm=3.98614952413; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctaatttaatcatttaaattaaatcttggctcaggattccc
>M01687:476:000000000-LL5F5:1:2116:26736:9598_CONS(1) ali_length=55; seq_ab_match=55; sminR=40.0; seq_a_deletion=246; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=219.841378758; seq_a_single=0; score_norm=3.99711597742; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=246; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttctttcacgcatgagagccttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2116:10126:12115_CONS(1) ali_length=77; seq_ab_match=77; sminR=40.0; seq_a_deletion=224; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=307.785268186; seq_a_single=0; score_norm=3.99721127515; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=224; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcacagatcggaagagcacagatcggaagagc
acagatcggaagagcac
>M01687:476:000000000-LL5F5:1:2116:4755:12182_CONS(3) count=3; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=67; mode=alignment; seq_b_deletion=234; seq_a_deletion=234; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatcggaagagtgtcgtgtagggaaagagtgtttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:2116:7333:12238_CONS(1) ali_length=109; seq_ab_match=109; sminR=40.0; seq_a_deletion=192; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=435.704458455; seq_a_single=0; score_norm=3.99728860968; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=192; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcccgtttcaatcgtttcaacccgctcctcgctggccagca
aggagaaagcttgccgatgccctgaaacgagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2116:23634:12293_CONS(1) ali_length=93; seq_ab_match=82; sminR=40.0; seq_a_deletion=208; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=1; seq_b_mismatch=10; score=265.346740994; seq_a_single=0; score_norm=2.85319076338; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=208; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttttttattcttgcttt
>M01687:476:000000000-LL5F5:1:2116:26164:12784_CONS(1) ali_length=91; seq_ab_match=71; sminR=40.0; seq_a_deletion=210; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=4; seq_b_mismatch=1; score=159.314230962; seq_a_single=0; score_norm=1.75070583475; obiclean_internalcount=0; direction=right; seq_b_insertion=15; obiclean_head=True; seq_b_deletion=225; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccccccaccctaccggctgccgcca
>M01687:476:000000000-LL5F5:1:2116:12892:14614_CONS(1) ali_length=58; seq_ab_match=56; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=2; seq_b_mismatch=0; score=215.034974559; seq_a_single=0; score_norm=3.70749956136; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcccactaatttcttatttagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2116:27748:15489_CONS(1) ali_length=61; seq_ab_match=61; sminR=40.0; seq_a_deletion=240; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=243.825837165; seq_a_single=0; score_norm=3.99714487156; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=240; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctctttccatacacgacgctcattggctcaggattgcc
c
>M01687:476:000000000-LL5F5:1:2116:19921:15861_CONS(1) ali_length=52; seq_ab_match=52; sminR=40.0; seq_a_deletion=249; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=207.84832899; seq_a_single=0; score_norm=3.99708324981; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=249; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagtcacttggctcaggatgccc
>M01687:476:000000000-LL5F5:1:2116:16744:19602_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.846449881; seq_a_single=0; score_norm=3.99710282794; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctttgcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2116:19647:21547_CONS(2) count=2; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=57; mode=alignment; seq_b_deletion=244; seq_a_deletion=244; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccatgagtctctgcacctatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2116:8700:24242_CONS(1) ali_length=81; seq_ab_match=81; sminR=40.0; seq_a_deletion=220; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=323.772881178; seq_a_single=0; score_norm=3.99719606393; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=220; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctgctcaaatcgcgatttctcgcttcgctcgaaatgagc
aggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2117:19697:5690_CONS(1) ali_length=56; seq_ab_match=56; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=223.838186745; seq_a_single=0; score_norm=3.99711047759; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctgcgatgtatcacaggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2117:21355:8835_CONS(1) ali_length=54; seq_ab_match=54; sminR=40.0; seq_a_deletion=247; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=247; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcccctacacgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2117:8746:10556_CONS(1) ali_length=57; seq_ab_match=57; sminR=40.0; seq_a_deletion=244; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=227.790989542; seq_a_single=0; score_norm=3.99633314987; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=244; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
caattgagtctctgcacctatcctttccctacatgaggctcttggctcaggattgcc
>M01687:476:000000000-LL5F5:1:2117:14871:11433_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.846449881; seq_a_single=0; score_norm=3.99710282794; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagccacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2117:17252:13628_CONS(1) ali_length=86; seq_ab_match=68; sminR=40.0; seq_a_deletion=217; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=8; seq_b_mismatch=7; score=172.605846006; seq_a_single=0; score_norm=2.007044721; obiclean_internalcount=1; direction=right; seq_b_insertion=1; obiclean_head=False; seq_b_deletion=216; obiclean_headcount=0; seq_a_insertion=2; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttatttt
>M01687:476:000000000-LL5F5:1:2117:27592:18414_CONS(2) count=2; obiclean_internalcount=1; direction=right; seq_b_single=0; sminR=40.0; obiclean_singletoncount=0; ali_length=85; mode=alignment; seq_a_deletion=216; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatccttttttattat
>M01687:476:000000000-LL5F5:1:2117:26954:20998_CONS(2) count=2; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=58; mode=alignment; seq_b_deletion=243; seq_b_mismatch=0; seq_a_deletion=243; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatcctttccctacatgacgttcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1119:10907:4105_CONS(1) ali_length=59; seq_ab_match=52; sminR=40.0; seq_a_deletion=242; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=4; seq_b_mismatch=3; score=160.782455175; seq_a_single=0; score_norm=2.72512635891; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=242; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctactt
>M01687:476:000000000-LL5F5:1:1119:18468:4446_CONS(1) ali_length=67; seq_ab_match=67; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=3; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgtttggctcagg
attgtcc
>M01687:476:000000000-LL5F5:1:1119:26574:8694_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.846121655; seq_a_single=0; score_norm=3.99709663499; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctcagcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1119:21488:12753_CONS(1) ali_length=67; seq_ab_match=62; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=2; seq_b_mismatch=3; score=212.140839683; seq_a_single=0; score_norm=3.16628118929; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgta
>M01687:476:000000000-LL5F5:1:1119:11079:16267_CONS(1) ali_length=64; seq_ab_match=64; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=255.813381872; seq_a_single=0; score_norm=3.99708409176; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttaacgattcattactccatcgttaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:2101:6689:2851_CONS(1) ali_length=62; seq_ab_match=62; sminR=40.0; seq_a_deletion=239; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=247.819466974; seq_a_single=0; score_norm=3.99708817699; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=239; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttaacgatttattactccgtcgttaacttggctcaggagc
cc
>M01687:476:000000000-LL5F5:1:2101:10921:3709_CONS(1) ali_length=56; seq_ab_match=56; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=223.838843197; seq_a_single=0; score_norm=3.99712219995; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccggcagtgtaccgccggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2101:24893:3903_CONS(3) count=3; obiclean_internalcount=0; direction=right; seq_b_single=0; sminR=40.0; obiclean_singletoncount=0; mode=alignment; obiclean_headcount=1; obiclean_samplecount=1; merged_ali_dir={}; obiclean_status={'XXX': 'h'}; seq_a_single=0; sminL=40.0; obiclean_head=True; 
ccattgagtctctgcacctatcctttt
>M01687:476:000000000-LL5F5:1:2101:23751:9735_CONS(1) ali_length=18; seq_ab_match=18; sminR=40.0; seq_a_deletion=283; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=71.9348662957; seq_a_single=0; score_norm=3.99638146087; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=283; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacc
>M01687:476:000000000-LL5F5:1:2101:21748:12510_CONS(1) ali_length=67; seq_ab_match=67; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=267.810295572; seq_a_single=0; score_norm=3.99716859063; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgtttggctcagg
attgcct
>M01687:476:000000000-LL5F5:1:2101:19159:13262_CONS(1) ali_length=100; seq_ab_match=100; sminR=40.0; seq_a_deletion=201; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=398.659093655; seq_a_single=0; score_norm=3.98659093655; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=201; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttagtctcgctttatgaacccttcaatttgttt
tatttgttttcggaaaacaggatttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2101:24216:14990_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.832182208; seq_a_single=0; score_norm=3.99710658979; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgacgctcatggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2101:11230:17485_CONS(1) ali_length=56; seq_ab_match=56; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=223.838514971; seq_a_single=0; score_norm=3.99711633877; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccggagatgtatccccggtttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2101:23350:22451_CONS(1) ali_length=78; seq_ab_match=69; sminR=40.0; seq_a_deletion=223; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=2; seq_b_mismatch=7; score=221.035517518; seq_a_single=0; score_norm=2.83378868613; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=223; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttctttctgaacc
>M01687:476:000000000-LL5F5:1:2101:10331:22574_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=238; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcacactctttccctacacaacgctcttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:1115:16636:7172_CONS(1) ali_length=77; seq_ab_match=77; sminR=40.0; seq_a_deletion=224; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=307.781953864; seq_a_single=0; score_norm=3.997168232; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=224; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccccccaccctaccggcgtaccgccggaccattggagggc
ttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1115:22599:8590_CONS(1) ali_length=67; seq_ab_match=67; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=267.810952024; seq_a_single=0; score_norm=3.99717838842; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctttgcacctatcggaagagcgtcgtgtagggaaagagtgtttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:1115:12349:8687_CONS(1) ali_length=85; seq_ab_match=85; sminR=40.0; seq_a_deletion=216; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=337.651525406; seq_a_single=0; score_norm=3.97237088713; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=216; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttcaccttctgcccctttgtttttttttttgaa
aacaggatttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1115:19875:9074_CONS(1) ali_length=156; seq_ab_match=156; sminR=40.0; seq_a_deletion=145; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=623.433702766; seq_a_single=0; score_norm=3.99636988952; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=145; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctggctgccatataagcaggatcaaatacccgcggggtcaggtgccggc
gccggaaccccttaagcgcccggaaggttatggagtaggccagggggtggacccggttgg
ccgactggtcgattatcaaatggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1115:24557:9678_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcacactctttccctacatgacgctcttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:1115:10476:9732_CONS(1) ali_length=64; seq_ab_match=62; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=1; score=237.427131984; seq_a_single=0; score_norm=3.70979893725; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=237; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttctcacgatttattactccgtcgttaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:1115:11686:10421_CONS(1) ali_length=64; seq_ab_match=64; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=255.597762995; seq_a_single=0; score_norm=3.99371504679; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ctattgagtctctgcacctattaacgatttattactccgtcgttaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:1115:4988:12529_CONS(1) ali_length=55; seq_ab_match=44; sminR=40.0; seq_a_deletion=247; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=5; seq_b_mismatch=5; score=99.3842127491; seq_a_single=0; score_norm=1.80698568635; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=246; obiclean_headcount=0; seq_a_insertion=1; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccgggagtgtaccccggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1115:7948:14127_CONS(1) ali_length=49; seq_ab_match=49; sminR=40.0; seq_a_deletion=252; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=195.855522461; seq_a_single=0; score_norm=3.99705147881; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=252; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagttggcacaggattgccc
>M01687:476:000000000-LL5F5:1:1115:15594:14785_CONS(2) count=2; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=53; mode=alignment; seq_b_deletion=248; seq_a_deletion=248; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatctg
>M01687:476:000000000-LL5F5:1:1115:29372:15479_CONS(1) ali_length=67; seq_ab_match=67; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=267.732554843; seq_a_single=0; score_norm=3.99600828123; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtggggaaagagtgtttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:1115:12400:16093_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.776579163; seq_a_single=0; score_norm=3.9966148358; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagagaaagagtgttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:1115:14441:17467_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.796941298; seq_a_single=0; score_norm=3.99649898789; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtttctgcacctatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1115:4533:20935_CONS(1) ali_length=65; seq_ab_match=65; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=259.809020972; seq_a_single=0; score_norm=3.99706186111; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcaagcctactatttgtccttcggcttgtttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:1116:24510:2635_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.80651723; seq_a_single=0; score_norm=3.9963493817; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactcctgtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1116:17243:4775_CONS(1) ali_length=27; seq_ab_match=27; sminR=40.0; seq_a_deletion=274; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=274; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=3; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacaggattgccc
>M01687:476:000000000-LL5F5:1:1116:25018:5006_CONS(1) ali_length=52; seq_ab_match=52; sminR=40.0; seq_a_deletion=249; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=207.846654137; seq_a_single=0; score_norm=3.9970510411; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=249; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagttctgcacttatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1116:13994:6057_CONS(1) ali_length=58; seq_ab_match=55; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=2; seq_b_mismatch=1; score=205.572685191; seq_a_single=0; score_norm=3.54435664123; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctctccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1116:26197:6274_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.788620324; seq_a_single=0; score_norm=3.99635552282; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgattctctgcacctatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1116:23156:8633_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.532619196; seq_a_single=0; score_norm=3.99291847267; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgttggctcggga
ttgccc
>M01687:476:000000000-LL5F5:1:1116:6354:10790_CONS(4) count=4; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; ali_length=53; mode=alignment; seq_b_deletion=248; seq_b_mismatch=0; seq_a_deletion=248; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcacctatctgaacaccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1116:17920:13802_CONS(1) ali_length=20; seq_ab_match=20; sminR=40.0; seq_a_deletion=281; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=79.9291389313; seq_a_single=0; score_norm=3.99645694656; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=281; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctggattgccc
>M01687:476:000000000-LL5F5:1:1116:20334:13855_CONS(1) ali_length=57; seq_ab_match=56; sminR=40.0; seq_a_deletion=244; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=219.545267806; seq_a_single=0; score_norm=3.85167136502; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=244; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccttgagtctctgcacctatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1116:8754:14499_CONS(1) ali_length=51; seq_ab_match=51; sminR=40.0; seq_a_deletion=250; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=203.216803895; seq_a_single=0; score_norm=3.98464321363; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=250; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcatgggaacttggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1116:6688:14839_CONS(1) ali_length=59; seq_ab_match=59; sminR=40.0; seq_a_deletion=242; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=235.800005865; seq_a_single=0; score_norm=3.9966102689; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=242; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctaatttaaacatttaaattaaatcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1116:9269:15042_CONS(1) ali_length=52; seq_ab_match=52; sminR=40.0; seq_a_deletion=249; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=249; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagtcacttggctcaggttgccc
>M01687:476:000000000-LL5F5:1:1116:17191:16165_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.833115623; seq_a_single=0; score_norm=3.99712268315; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=243; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcccaacattttcacattgggcttggctcagggttgccc
>M01687:476:000000000-LL5F5:1:1116:16283:17438_CONS(1) ali_length=109; seq_ab_match=109; sminR=40.0; seq_a_deletion=192; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=429.181859643; seq_a_single=0; score_norm=3.9374482536; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=192; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcccgtttcaatcgtttcaacccgctcctcgctggccagca
aggagaaagcgtgccgatgccctgaaacgagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1116:10776:17828_CONS(1) ali_length=86; seq_ab_match=86; sminR=40.0; seq_a_deletion=215; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=343.731545713; seq_a_single=0; score_norm=3.99687843853; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=215; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcagggaatcaagggtggactcaacgaaatgtccgactca
cgggatgctgtggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1116:18566:18316_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.833772075; seq_a_single=0; score_norm=3.99713400129; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgtcgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1116:19132:18958_CONS(2) count=2; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=58; mode=alignment; seq_b_deletion=243; seq_a_deletion=243; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccatgagtctctgcacctaatttaatcatttaaattaaatcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1116:12258:19008_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ctattgagtctctgcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1116:27110:20596_CONS(1) ali_length=57; seq_ab_match=57; sminR=40.0; seq_a_deletion=244; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=244; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctttccctacacgacgctattggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1114:20621:3219_CONS(1) ali_length=62; seq_ab_match=62; sminR=40.0; seq_a_deletion=239; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=239.773582027; seq_a_single=0; score_norm=3.86731583915; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=239; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccactctttccctacaagacgctcttggctcaggattgc
cc
>M01687:476:000000000-LL5F5:1:1114:25653:7072_CONS(1) ali_length=58; seq_ab_match=53; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=2; seq_b_mismatch=3; score=189.228578466; seq_a_single=0; score_norm=3.26256169769; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
gggcaatcctgagccaagagcttcatgtagggaaaggataggtgcagagactcaatgg
>M01687:476:000000000-LL5F5:1:1114:15194:7095_CONS(1) ali_length=65; seq_ab_match=65; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=259.180892827; seq_a_single=0; score_norm=3.98739835118; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcccgcctacttattgcccttcggcgggcttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:1114:6155:11320_CONS(1) ali_length=52; seq_ab_match=52; sminR=40.0; seq_a_deletion=249; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=207.81710849; seq_a_single=0; score_norm=3.99648285559; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=249; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgccctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1114:7819:13517_CONS(1) ali_length=64; seq_ab_match=63; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=248.085226006; seq_a_single=0; score_norm=3.87633165635; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctattaacgatttattactccgtcgttaacttggcttaggatt
gccc
>M01687:476:000000000-LL5F5:1:1114:24851:14168_CONS(1) ali_length=54; seq_ab_match=54; sminR=40.0; seq_a_deletion=247; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=215.794434925; seq_a_single=0; score_norm=3.99619323934; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=247; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1114:15931:18528_CONS(1) ali_length=58; seq_ab_match=57; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=1; score=210.927296841; seq_a_single=0; score_norm=3.63667753175; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccct
>M01687:476:000000000-LL5F5:1:1114:20282:19626_CONS(1) ali_length=85; seq_ab_match=69; sminR=40.0; seq_a_deletion=216; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=8; seq_b_mismatch=8; score=192.764387624; seq_a_single=0; score_norm=2.26781632499; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=216; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttattattg
>M01687:476:000000000-LL5F5:1:1114:21589:24348_CONS(1) ali_length=65; seq_ab_match=65; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcaagcatactatttgtccttcggcttgcttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:1114:8861:24497_CONS(1) ali_length=67; seq_ab_match=67; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=267.802839903; seq_a_single=0; score_norm=3.99705731198; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagagaaagagtgtttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:1113:11474:5031_CONS(1) ali_length=65; seq_ab_match=65; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=259.816023146; seq_a_single=0; score_norm=3.99716958687; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctgccttcgttaaaaacaaactaacgaaagattggctaaggat
tgccc
>M01687:476:000000000-LL5F5:1:1113:7954:5787_CONS(1) ali_length=63; seq_ab_match=62; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=0; score=243.165001404; seq_a_single=0; score_norm=3.85976192705; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctcacctatgaaactctagttagacttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:1113:6287:6276_CONS(1) ali_length=53; seq_ab_match=51; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=1; score=187.455224062; seq_a_single=0; score_norm=3.53689102005; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagtgacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1113:23263:7542_CONS(1) ali_length=95; seq_ab_match=95; sminR=40.0; seq_a_deletion=206; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=379.164714208; seq_a_single=0; score_norm=3.99120751798; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=206; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttgtattcttattctgtctttatgaacctttgttt
gttttagaaaaataggatttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1113:14605:7718_CONS(1) ali_length=60; seq_ab_match=59; sminR=40.0; seq_a_deletion=241; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=1; score=231.369734804; seq_a_single=0; score_norm=3.85616224674; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=241; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacccacaaatagattttaatctataagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1113:5627:9504_CONS(1) ali_length=88; seq_ab_match=80; sminR=40.0; seq_a_deletion=213; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=6; score=235.028258825; seq_a_single=0; score_norm=2.67077566846; obiclean_internalcount=1; direction=right; seq_b_insertion=1; obiclean_head=False; seq_b_deletion=214; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttttt
>M01687:476:000000000-LL5F5:1:1113:17484:9757_CONS(1) ali_length=67; seq_ab_match=66; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=251.38847373; seq_a_single=0; score_norm=3.7520667721; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctattggaagagcgtcgtgtagggaaagagtgtttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:1113:14812:11400_CONS(1) ali_length=74; seq_ab_match=73; sminR=40.0; seq_a_deletion=227; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=1; seq_b_mismatch=0; score=282.004610847; seq_a_single=0; score_norm=3.81087311956; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=227; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttctgccctaccgatcttgcgaacatcctttcagtcagcttg
gctcaggattgccc
>M01687:476:000000000-LL5F5:1:1113:6774:11754_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.191396341; seq_a_single=0; score_norm=3.98605855761; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctatatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1113:16197:13921_CONS(1) ali_length=56; seq_ab_match=56; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctttcctacacgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1113:17699:14170_CONS(1) ali_length=56; seq_ab_match=56; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=223.838843197; seq_a_single=0; score_norm=3.99712219995; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttctggagctgtagctccagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1113:4913:16108_CONS(1) ali_length=57; seq_ab_match=57; sminR=40.0; seq_a_deletion=244; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=227.823533095; seq_a_single=0; score_norm=3.99690408938; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=244; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1113:6979:16160_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=210.542815195; seq_a_single=0; score_norm=3.97250594708; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctatgcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1113:7690:17767_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=254.947669788; seq_a_single=0; score_norm=3.86284348164; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcccggctactttctgccc
>M01687:476:000000000-LL5F5:1:1113:8484:19890_CONS(1) ali_length=101; seq_ab_match=101; sminR=40.0; seq_a_deletion=200; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=200; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcccgtttcaatccacctctgacggctgtccgcaagaggaa
ctttcaggatacccagaaacgggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1113:26993:19914_CONS(1) ali_length=53; seq_ab_match=52; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=200.268013117; seq_a_single=0; score_norm=3.77864175692; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagtcgcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1113:24263:21155_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=251.742330029; seq_a_single=0; score_norm=3.99591000047; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcacactctttccctacacgatactcttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:1112:16328:12753_CONS(1) ali_length=108; seq_ab_match=108; sminR=40.0; seq_a_deletion=193; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=430.765432169; seq_a_single=0; score_norm=3.98856881638; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=193; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacacgacgcccttccgatctccattgagtc
tctgcacctatcctttccctacatgacgttcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1112:22519:13383_CONS(1) ali_length=59; seq_ab_match=59; sminR=40.0; seq_a_deletion=242; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=234.641319378; seq_a_single=0; score_norm=3.97697151488; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=242; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctaatttaatcatttaaattaaatcttgactcaggattgccc
>M01687:476:000000000-LL5F5:1:1112:19968:14088_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=251.817208376; seq_a_single=0; score_norm=3.99709854564; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcacactctttccctgcacgacactcttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:1112:20444:15084_CONS(1) ali_length=59; seq_ab_match=59; sminR=40.0; seq_a_deletion=242; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=235.728312471; seq_a_single=0; score_norm=3.99539512662; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=242; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctacacctaatttaatcatttaaattaaatcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1112:13945:18331_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtttctgcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1112:21539:21791_CONS(1) ali_length=85; seq_ab_match=84; sminR=40.0; seq_a_deletion=216; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=1; score=307.258199139; seq_a_single=0; score_norm=3.61480234281; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=216; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttattatcgctttatgaaccct
>M01687:476:000000000-LL5F5:1:1111:23393:1996_CONS(1) ali_length=67; seq_ab_match=59; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=1; seq_b_mismatch=7; score=196.079087101; seq_a_single=0; score_norm=2.92655353883; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtc
>M01687:476:000000000-LL5F5:1:1111:20094:4149_CONS(1) ali_length=53; seq_ab_match=52; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=201.974632002; seq_a_single=0; score_norm=3.81084211325; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctcttcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1111:17979:4531_CONS(1) ali_length=68; seq_ab_match=68; sminR=40.0; seq_a_deletion=233; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=271.808416463; seq_a_single=0; score_norm=3.99718259504; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=233; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcccgcctacttgttgctgcccttcggcgggcttggctcag
gattgccc
>M01687:476:000000000-LL5F5:1:1111:16182:6304_CONS(1) ali_length=82; seq_ab_match=56; sminR=40.0; seq_a_deletion=219; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=10; seq_b_mismatch=16; score=82.3911283026; seq_a_single=0; score_norm=1.00476985735; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=219; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttctcgctttatgaacccttattttga
>M01687:476:000000000-LL5F5:1:1111:15515:7443_CONS(1) ali_length=106; seq_ab_match=78; sminR=40.0; seq_a_deletion=195; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=9; seq_b_mismatch=18; score=147.324008396; seq_a_single=0; score_norm=1.38984913582; obiclean_internalcount=0; direction=right; seq_b_insertion=1; obiclean_head=True; seq_b_deletion=196; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttgtattctt
>M01687:476:000000000-LL5F5:1:1111:20067:7574_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.787152773; seq_a_single=0; score_norm=3.99633022023; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttcactacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1111:26263:7856_CONS(1) ali_length=62; seq_ab_match=59; sminR=40.0; seq_a_deletion=239; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=3; seq_b_mismatch=0; score=222.094876377; seq_a_single=0; score_norm=3.58217542543; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=239; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccactctttccctacacgacgctcttggctcaggattgc
cc
>M01687:476:000000000-LL5F5:1:1111:21296:11162_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=251.821094269; seq_a_single=0; score_norm=3.99716022649; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcacactctttccctacacgaccctcttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:1111:29156:13717_CONS(1) ali_length=67; seq_ab_match=67; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=267.808241336; seq_a_single=0; score_norm=3.99713793038; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=234; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtttctgcaccttcttagctacctttttatcatttcactaagcttggctcagg
attgccc
>M01687:476:000000000-LL5F5:1:1111:26950:14224_CONS(1) ali_length=69; seq_ab_match=52; sminR=40.0; seq_a_deletion=232; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=3; seq_b_mismatch=14; score=121.757443663; seq_a_single=0; score_norm=1.76460063279; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=232; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctgg
>M01687:476:000000000-LL5F5:1:1111:13564:15709_CONS(1) ali_length=59; seq_ab_match=59; sminR=40.0; seq_a_deletion=242; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=235.830580062; seq_a_single=0; score_norm=3.99712847562; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=242; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ctattgagtctctgcacctaatttaatcatttaaattaaatcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1111:13394:16414_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.846449881; seq_a_single=0; score_norm=3.99710282794; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagacacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1111:12587:18624_CONS(1) ali_length=65; seq_ab_match=64; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=0; score=247.617866853; seq_a_single=0; score_norm=3.80950564389; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccagcctactatttgtccttcggcttgcttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:1111:20658:22923_CONS(1) ali_length=93; seq_ab_match=93; sminR=40.0; seq_a_deletion=208; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=369.37462827; seq_a_single=0; score_norm=3.97177019645; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=208; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttttttctcccgttctgacccgttgtttgtttttgt
tctcgtaaaataggatttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1110:18039:2523_CONS(1) ali_length=58; seq_ab_match=57; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=223.324973731; seq_a_single=0; score_norm=3.85043058156; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcaaactaatttcttatttagcgtggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1110:15304:4076_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.184390925; seq_a_single=0; score_norm=3.98461114952; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactctagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1110:27021:6972_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagtcacttggctcagaattgccc
>M01687:476:000000000-LL5F5:1:1110:25146:8072_CONS(1) ali_length=64; seq_ab_match=64; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=255.817902256; seq_a_single=0; score_norm=3.99715472275; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttagcgatttattactccgtcgttaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:1110:4483:9274_CONS(1) ali_length=55; seq_ab_match=52; sminR=40.0; seq_a_deletion=246; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=3; score=194.050999722; seq_a_single=0; score_norm=3.52819999495; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=246; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttctttcacgcatgaaagccttggctcaggattg
>M01687:476:000000000-LL5F5:1:1110:8600:10983_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=231.809002067; seq_a_single=0; score_norm=3.99670693219; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattggtctctgcacctatctctttccctacacgacactcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1110:10879:11393_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.843220439; seq_a_single=0; score_norm=3.99704189508; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=248; obiclean_headcount=1; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'h'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaagtccagtcacttggctcaggattgcca
>M01687:476:000000000-LL5F5:1:1110:26018:12259_CONS(1) ali_length=64; seq_ab_match=64; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=255.816504366; seq_a_single=0; score_norm=3.99713288072; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccatttagtctctgcaccttttaacgatttattactccttcgttaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:1110:27691:14376_CONS(1) ali_length=59; seq_ab_match=59; sminR=40.0; seq_a_deletion=242; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=234.324123323; seq_a_single=0; score_norm=3.97159531055; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=242; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcttattaaaaatataaaagatttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1110:3817:16835_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.831855537; seq_a_single=0; score_norm=3.99710095753; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgacgctctcggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1110:23134:17677_CONS(1) ali_length=64; seq_ab_match=64; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttaacgatttattactccgtcgttaacttggctcagaatt
gccc
>M01687:476:000000000-LL5F5:1:1110:5378:21732_CONS(1) ali_length=64; seq_ab_match=64; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=255.702792963; seq_a_single=0; score_norm=3.99535614005; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttaacgacttattactccgtcgttaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:1109:12194:2574_CONS(1) ali_length=53; seq_ab_match=51; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=1; seq_b_mismatch=1; score=188.92609948; seq_a_single=0; score_norm=3.56464338642; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccag
>M01687:476:000000000-LL5F5:1:1109:11057:2719_CONS(1) ali_length=74; seq_ab_match=74; sminR=40.0; seq_a_deletion=227; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=295.792218418; seq_a_single=0; score_norm=3.99719214079; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=227; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
tcattgagtctctgcaccttctgacctaccgatcttgcgatcatcctttcagtcagcttg
gctcaggattgccc
>M01687:476:000000000-LL5F5:1:1109:7902:3750_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.831199085; seq_a_single=0; score_norm=3.9970896394; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccatacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1109:13015:6306_CONS(1) ali_length=90; seq_ab_match=90; sminR=40.0; seq_a_deletion=211; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=359.721731694; seq_a_single=0; score_norm=3.99690812994; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=211; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttttttattatcgttttctgaacccttggttgtttt
cggaaaacaggatttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1109:18072:7547_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.845793429; seq_a_single=0; score_norm=3.99709044205; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgatctccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1109:10165:7686_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.832374185; seq_a_single=0; score_norm=3.99710989974; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgtacctatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1109:6812:8149_CONS(1) ali_length=63; seq_ab_match=61; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=2; score=226.082387416; seq_a_single=0; score_norm=3.58860932407; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctaa
>M01687:476:000000000-LL5F5:1:1109:13118:11930_CONS(1) ali_length=60; seq_ab_match=60; sminR=40.0; seq_a_deletion=241; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=239.828700952; seq_a_single=0; score_norm=3.99714501587; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=241; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccgtggtgctttcacgcttcggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1109:7663:14868_CONS(1) ali_length=54; seq_ab_match=54; sminR=40.0; seq_a_deletion=247; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=215.843914319; seq_a_single=0; score_norm=3.99710952443; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=247; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttctttcacgcatgaaagccttggctcagattgccc
>M01687:476:000000000-LL5F5:1:1109:13873:16242_CONS(1) ali_length=65; seq_ab_match=64; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=251.155079908; seq_a_single=0; score_norm=3.86392430628; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccatgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:1109:20643:18101_CONS(1) ali_length=66; seq_ab_match=65; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=255.770925956; seq_a_single=0; score_norm=3.87531705994; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgacctatcggaagagcgtcgtgtagggaaagagtgtttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:1109:19329:19527_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=251.820109591; seq_a_single=0; score_norm=3.99714459668; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattaagtctctgcaccttctggcctactattgtcctcgaccaacttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:1109:14436:19556_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.833115623; seq_a_single=0; score_norm=3.99712268315; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctgtcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1109:7682:21468_CONS(1) ali_length=80; seq_ab_match=58; sminR=40.0; seq_a_deletion=221; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=10; score=130.7035817; seq_a_single=0; score_norm=1.63379477125; obiclean_internalcount=0; direction=right; seq_b_insertion=12; obiclean_head=True; seq_b_deletion=233; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcccggctactggtggccatctgaaccaccgccc
>M01687:476:000000000-LL5F5:1:1108:18624:2060_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.791088009; seq_a_single=0; score_norm=3.99639806912; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgacgcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1108:7953:2859_CONS(1) ali_length=163; seq_ab_match=161; sminR=40.0; seq_a_deletion=138; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=2; seq_b_mismatch=0; score=618.871433357; seq_a_single=0; score_norm=3.79675725986; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=138; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcgcttatcatac
>M01687:476:000000000-LL5F5:1:1108:17687:4337_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.846121655; seq_a_single=0; score_norm=3.99709663499; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgattctctgcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1108:25178:5889_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.843219007; seq_a_single=0; score_norm=3.99704186806; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1108:19592:6168_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.165874581; seq_a_single=0; score_norm=3.98426178456; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaagtccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1108:15841:7803_CONS(1) ali_length=67; seq_ab_match=56; sminR=40.0; seq_a_deletion=234; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=2; seq_b_mismatch=6; score=148.263792699; seq_a_single=0; score_norm=2.21289242834; obiclean_internalcount=1; direction=right; seq_b_insertion=3; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcg
>M01687:476:000000000-LL5F5:1:1108:24867:8297_CONS(1) ali_length=108; seq_ab_match=103; sminR=40.0; seq_a_deletion=193; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=4; score=372.509872875; seq_a_single=0; score_norm=3.44916548958; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=193; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacacgacgctcttccgatctccattgagtc
tctgcacctatcctttccctacatgacactcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1108:21860:10213_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.551283232; seq_a_single=0; score_norm=3.99226350399; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctgcatgacactcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1108:9849:10554_CONS(1) ali_length=64; seq_ab_match=62; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=1; seq_b_mismatch=1; score=226.375760789; seq_a_single=0; score_norm=3.53712126234; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttaacgat
>M01687:476:000000000-LL5F5:1:1108:7645:10828_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.828538209; seq_a_single=0; score_norm=3.99704376223; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacatgacactattggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1108:7538:12375_CONS(1) ali_length=74; seq_ab_match=74; sminR=40.0; seq_a_deletion=227; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=295.334795118; seq_a_single=0; score_norm=3.99101074483; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=227; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttctgacctacggatcttgcgatcatcctttcagtcagcttg
gctcaggattgccc
>M01687:476:000000000-LL5F5:1:1108:23733:12573_CONS(1) ali_length=64; seq_ab_match=63; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=1; seq_b_mismatch=0; score=241.861278761; seq_a_single=0; score_norm=3.77908248064; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttaacgatttattact
>M01687:476:000000000-LL5F5:1:1108:15065:12604_CONS(2) count=2; obiclean_internalcount=1; direction=right; seq_b_insertion=0; sminR=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; ali_length=64; mode=alignment; seq_b_deletion=237; seq_a_deletion=237; obiclean_headcount=0; seq_a_insertion=0; obiclean_samplecount=1; seq_b_single=0; merged_ali_dir={}; obiclean_status={'XXX': 'i'}; seq_a_single=0; sminL=40.0; obiclean_head=False; 
ccattgagtctctgcaccttttaacgatttattactccatcgttaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:1108:4461:14718_CONS(1) ali_length=52; seq_ab_match=51; sminR=40.0; seq_a_deletion=249; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=199.820424302; seq_a_single=0; score_norm=3.84270046735; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=249; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattggtctctgcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1108:11301:18337_CONS(1) ali_length=65; seq_ab_match=65; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=259.815694921; seq_a_single=0; score_norm=3.99716453724; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcaagcctactatttgtccttcggcttgcttgactcaggat
tgccc
>M01687:476:000000000-LL5F5:1:1108:3286:18708_CONS(1) ali_length=65; seq_ab_match=65; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=259.815694921; seq_a_single=0; score_norm=3.99716453724; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcaagcctactatttgtccttcgacttgcttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:1108:11653:20420_CONS(1) ali_length=56; seq_ab_match=56; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=223.838843197; seq_a_single=0; score_norm=3.99712219995; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcttaccgtataccgtaagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1107:18362:2222_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.833030637; seq_a_single=0; score_norm=3.99712121788; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcccttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1107:19067:3403_CONS(1) ali_length=62; seq_ab_match=61; sminR=40.0; seq_a_deletion=239; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=238.688706351; seq_a_single=0; score_norm=3.84981784437; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=239; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccatgagtctctgcacctatctaacctatgaaactctagttagacttggctcaggattgc
cc
>M01687:476:000000000-LL5F5:1:1107:13968:3978_CONS(1) ali_length=56; seq_ab_match=56; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=223.832279072; seq_a_single=0; score_norm=3.99700498342; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccactgagtctctgcaccttcttacggtataccgtaagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1107:15281:10707_CONS(1) ali_length=56; seq_ab_match=55; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=216.052592819; seq_a_single=0; score_norm=3.85808201463; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcttacgatataccgtaagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1107:16263:20742_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=251.798492017; seq_a_single=0; score_norm=3.99680146059; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcacactctttctctacacgacactcttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:1106:9007:2426_CONS(1) ali_length=48; seq_ab_match=48; sminR=40.0; seq_a_deletion=253; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=191.840793954; seq_a_single=0; score_norm=3.99668320738; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=253; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccatgagtctctgcacctatctgaactccagttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1106:4142:6685_CONS(1) ali_length=65; seq_ab_match=64; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=1; score=252.030429221; seq_a_single=0; score_norm=3.87739121878; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccatcaagcctaccatttgtccttcggcttgcttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:1106:3535:8205_CONS(1) ali_length=57; seq_ab_match=57; sminR=40.0; seq_a_deletion=244; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=226.165196189; seq_a_single=0; score_norm=3.96781045945; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=244; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccgcgtaaaacatccgcggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1106:27644:10270_CONS(1) ali_length=56; seq_ab_match=56; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=223.838186745; seq_a_single=0; score_norm=3.99711047759; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcttacggtatacagtaagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1106:25318:14342_CONS(1) ali_length=60; seq_ab_match=50; sminR=40.0; seq_a_deletion=241; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=3; seq_b_mismatch=3; score=115.143396612; seq_a_single=0; score_norm=1.9190566102; obiclean_internalcount=1; direction=right; seq_b_insertion=4; obiclean_head=False; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttccgg
>M01687:476:000000000-LL5F5:1:1106:15493:18505_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.258864914; seq_a_single=0; score_norm=3.98877068051; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgttggctcagga
ttgcca
>M01687:476:000000000-LL5F5:1:1106:23050:18892_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.846121655; seq_a_single=0; score_norm=3.99709663499; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagtcacttggcttaggattgccc
>M01687:476:000000000-LL5F5:1:1106:8749:20613_CONS(1) ali_length=73; seq_ab_match=73; sminR=40.0; seq_a_deletion=228; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=291.161349775; seq_a_single=0; score_norm=3.98851164076; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=228; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtcttgcaccttctgacctaccgatcttgcgatcatcctttcagtcagcttgg
ctcaggattgccc
>M01687:476:000000000-LL5F5:1:1106:19334:20830_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.795961165; seq_a_single=0; score_norm=3.99615021065; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacttatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1106:14062:23854_CONS(1) ali_length=54; seq_ab_match=54; sminR=40.0; seq_a_deletion=247; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=215.843257868; seq_a_single=0; score_norm=3.99709736792; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=247; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagtcacttggctcaggatttgccc
>M01687:476:000000000-LL5F5:1:1105:15111:7253_CONS(1) ali_length=59; seq_ab_match=58; sminR=40.0; seq_a_deletion=242; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=0; score=227.838444624; seq_a_single=0; score_norm=3.86166855295; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=242; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctaatttaatcatttaaattaaatcttggctcaagattgccc
>M01687:476:000000000-LL5F5:1:1105:4971:10615_CONS(1) ali_length=54; seq_ab_match=54; sminR=40.0; seq_a_deletion=247; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=215.843586093; seq_a_single=0; score_norm=3.99710344618; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=247; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1105:18104:11085_CONS(1) ali_length=64; seq_ab_match=63; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=248.028803481; seq_a_single=0; score_norm=3.87545005438; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttaacgatttattactccgtcgttaacatggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:1105:2742:11311_CONS(1) ali_length=109; seq_ab_match=106; sminR=40.0; seq_a_deletion=192; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=3; score=397.732443956; seq_a_single=0; score_norm=3.64892150419; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=192; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcccgtttcaatcgtttcaacccgctcctcgctagatagca
aggagaaagcttgccgatgccctgaaacgagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1105:8387:16637_CONS(1) ali_length=63; seq_ab_match=61; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=1; score=235.422988216; seq_a_single=0; score_norm=3.73687282883; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattcagtctctgcacctatcacactctttccctacacgacactcttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:1105:4502:18059_CONS(1) ali_length=85; seq_ab_match=70; sminR=40.0; seq_a_deletion=216; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=12; seq_b_mismatch=3; score=202.075044222; seq_a_single=0; score_norm=2.37735346144; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=216; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttattatcgctttatgaa
>M01687:476:000000000-LL5F5:1:1105:16166:19007_CONS(1) ali_length=51; seq_ab_match=51; sminR=40.0; seq_a_deletion=250; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=196.508207826; seq_a_single=0; score_norm=3.85310211424; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=250; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctgtgttacagacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1105:13728:22694_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=262.124105765; seq_a_single=0; score_norm=3.97157736008; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ctattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:1105:23892:23951_CONS(1) ali_length=108; seq_ab_match=108; sminR=40.0; seq_a_deletion=193; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=431.62027301; seq_a_single=0; score_norm=3.99648400935; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=193; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacacgacgctcttccgatctccattgagtc
tctgcacatatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1104:19292:1829_CONS(1) ali_length=56; seq_ab_match=55; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=216.053249271; seq_a_single=0; score_norm=3.85809373699; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcttacggtataccgtaagtttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1104:12254:2613_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; seq_a_single=0; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=2; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcacactctttccctatacgacgctcttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:1104:11741:10798_CONS(1) ali_length=63; seq_ab_match=62; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=0; score=243.835445281; seq_a_single=0; score_norm=3.87040389335; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcacactctttccctacacgacgatcttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:1104:10182:11316_CONS(1) ali_length=91; seq_ab_match=91; sminR=40.0; seq_a_deletion=210; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=363.74977033; seq_a_single=0; score_norm=3.99725022341; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=210; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcccttttttattttaactttctgaacttttattttgttt
tcggaaagaaggatttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1104:20771:14582_CONS(1) ali_length=64; seq_ab_match=64; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=255.81641938; seq_a_single=0; score_norm=3.99713155281; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
tcattgagtctctgcaccttttaacgatttattactccgtcgttaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:1104:9522:17312_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=251.781923401; seq_a_single=0; score_norm=3.99653846668; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctttctaacctatgaaactctagttagacttggctcagggttg
ccc
>M01687:476:000000000-LL5F5:1:1104:13946:17408_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=231.8022132; seq_a_single=0; score_norm=3.99658988276; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgtgattgccc
>M01687:476:000000000-LL5F5:1:1104:4081:17985_CONS(1) ali_length=49; seq_ab_match=49; sminR=40.0; seq_a_deletion=252; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=195.856592125; seq_a_single=0; score_norm=3.99707330868; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=252; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatttgaactccagttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1104:28180:18054_CONS(1) ali_length=85; seq_ab_match=82; sminR=40.0; seq_a_deletion=216; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=3; score=312.83421632; seq_a_single=0; score_norm=3.68040254495; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=216; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttattatcgctttatgaacccttattttcataa
aacaggatttggctcaggattgcc
>M01687:476:000000000-LL5F5:1:1104:20290:19756_CONS(1) ali_length=98; seq_ab_match=74; sminR=40.0; seq_a_deletion=203; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=14; seq_b_mismatch=10; score=175.118913799; seq_a_single=0; score_norm=1.78692769182; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=203; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctt
>M01687:476:000000000-LL5F5:1:1104:22439:20130_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=251.818849505; seq_a_single=0; score_norm=3.99712459532; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtcttgcaccttttaacgatttattactccgtcgttaacttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:1104:9834:24404_CONS(1) ali_length=65; seq_ab_match=65; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=258.325023471; seq_a_single=0; score_norm=3.97423113033; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcaagtctactatttgtccttcggcttgcttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:1103:15599:3514_CONS(1) ali_length=49; seq_ab_match=49; sminR=40.0; seq_a_deletion=252; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=195.856592125; seq_a_single=0; score_norm=3.99707330868; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=252; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctttgcacctatctgaactccagttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1103:4598:6095_CONS(1) ali_length=62; seq_ab_match=62; sminR=40.0; seq_a_deletion=239; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=247.768796188; seq_a_single=0; score_norm=3.99627090625; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=239; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccactctttccctacacgacactcttggctcaggattgc
cc
>M01687:476:000000000-LL5F5:1:1103:6901:14900_CONS(1) ali_length=66; seq_ab_match=65; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=256.038681293; seq_a_single=0; score_norm=3.87937395899; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccatcggaagagcgtcgtgtagggaaagagtgtttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:1103:13358:15385_CONS(1) ali_length=62; seq_ab_match=62; sminR=40.0; seq_a_deletion=239; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=247.814999451; seq_a_single=0; score_norm=3.99701612018; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=239; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcacagatcggaagagcacagatcggaagagc
ac
>M01687:476:000000000-LL5F5:1:1103:21092:16126_CONS(1) ali_length=55; seq_ab_match=55; sminR=40.0; seq_a_deletion=246; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=219.841050532; seq_a_single=0; score_norm=3.99711000968; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=246; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgggtctctgcaccttctttcacgcatgaaagccttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1103:22869:17171_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=230.423799183; seq_a_single=0; score_norm=3.97282412384; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcatctatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1103:28709:18130_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.81151823; seq_a_single=0; score_norm=3.9971442156; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgttggctaagga
ttgccc
>M01687:476:000000000-LL5F5:1:1103:17609:19323_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.846121655; seq_a_single=0; score_norm=3.99709663499; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagtcacttggctcaagattgccc
>M01687:476:000000000-LL5F5:1:1103:8194:22770_CONS(1) ali_length=80; seq_ab_match=71; sminR=40.0; seq_a_deletion=221; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=5; seq_b_mismatch=4; score=231.406484468; seq_a_single=0; score_norm=2.89258105585; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=221; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccccttttcgctttatgaaccttta
>M01687:476:000000000-LL5F5:1:1118:24138:2118_CONS(1) ali_length=65; seq_ab_match=65; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=259.177232371; seq_a_single=0; score_norm=3.98734203648; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcccagctacaaaatgccctttgctgggcttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:1118:7947:3427_CONS(1) ali_length=66; seq_ab_match=66; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=263.812502908; seq_a_single=0; score_norm=3.99715913496; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcactatcggaagagcgtcgtgtagggaaagagtgtttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:1118:7101:6544_CONS(1) ali_length=64; seq_ab_match=64; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=255.751529901; seq_a_single=0; score_norm=3.9961176547; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcaagcctactatttgtccttcggcttgcttggctcaggat
tgcc
>M01687:476:000000000-LL5F5:1:1118:10753:8663_CONS(1) ali_length=70; seq_ab_match=58; sminR=40.0; seq_a_deletion=232; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=9; seq_b_mismatch=2; score=165.90107554; seq_a_single=0; score_norm=2.37001536485; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=231; obiclean_headcount=0; seq_a_insertion=1; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacct
>M01687:476:000000000-LL5F5:1:1118:23992:14262_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.833115623; seq_a_single=0; score_norm=3.99712268315; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ctattgagtctctgcaccttcaaactaatttcttatttagcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1118:11512:16961_CONS(1) ali_length=108; seq_ab_match=108; sminR=40.0; seq_a_deletion=193; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=431.681159309; seq_a_single=0; score_norm=3.99704777138; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=193; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctacacgacgctcttccgatctccatttagtc
tctgcacctatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1118:10534:19042_CONS(1) ali_length=61; seq_ab_match=61; sminR=40.0; seq_a_deletion=240; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=243.825837165; seq_a_single=0; score_norm=3.99714487156; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=240; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctataggagattatttatatctcaagcttggctcaggattgcc
c
>M01687:476:000000000-LL5F5:1:1118:8838:19160_CONS(1) ali_length=65; seq_ab_match=65; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=259.81443328; seq_a_single=0; score_norm=3.99714512738; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcaaacctactatttgtccttcggcttgcttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:1118:8723:22056_CONS(1) ali_length=94; seq_ab_match=81; sminR=40.0; seq_a_deletion=216; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=4; seq_b_mismatch=0; score=258.621319761; seq_a_single=0; score_norm=2.75129063576; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=207; obiclean_headcount=0; seq_a_insertion=9; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttagtctcgctttatgaaccc
>M01687:476:000000000-LL5F5:1:1118:17467:23535_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.833443849; seq_a_single=0; score_norm=3.99712834222; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctgctggtttcccagcaggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1117:7362:3035_CONS(1) ali_length=52; seq_ab_match=52; sminR=40.0; seq_a_deletion=249; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=207.069680638; seq_a_single=0; score_norm=3.98210924303; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=249; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctcgcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1117:17755:4343_CONS(1) ali_length=91; seq_ab_match=91; sminR=40.0; seq_a_deletion=210; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=363.749113878; seq_a_single=0; score_norm=3.99724300965; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=210; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttcctttgtattctagttcgagaaccccttgtttt
ctcaaaacacggatttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1117:15304:5802_CONS(1) ali_length=64; seq_ab_match=64; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=255.816091154; seq_a_single=0; score_norm=3.99712642428; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttaacgatttactactccgtcgttaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:1117:23951:6005_CONS(1) ali_length=59; seq_ab_match=59; sminR=40.0; seq_a_deletion=242; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=235.821876556; seq_a_single=0; score_norm=3.99698095858; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=242; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctaatttaatcatgtaaattaaatcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1117:4705:6170_CONS(1) ali_length=54; seq_ab_match=54; sminR=40.0; seq_a_deletion=247; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=215.843914319; seq_a_single=0; score_norm=3.99710952443; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=247; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacttatctgaactccagtcacttggctcaggattgcccc
>M01687:476:000000000-LL5F5:1:1117:21037:8186_CONS(1) ali_length=62; seq_ab_match=62; sminR=40.0; seq_a_deletion=239; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=247.150128078; seq_a_single=0; score_norm=3.98629238836; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=239; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttctggcctactattgtcctcgaccagcttggctaggattgc
cc
>M01687:476:000000000-LL5F5:1:1117:3722:8257_CONS(1) ali_length=64; seq_ab_match=62; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=1; score=239.868854439; seq_a_single=0; score_norm=3.7479508506; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttcacgatttattactccgtcgttaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:1117:11145:8287_CONS(1) ali_length=20; seq_ab_match=20; sminR=40.0; seq_a_deletion=281; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=79.9297951734; seq_a_single=0; score_norm=3.99648975867; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=281; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgactcaggattgccc
>M01687:476:000000000-LL5F5:1:1117:2649:9924_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.815437765; seq_a_single=0; score_norm=3.9968178925; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctgtatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1117:20944:10179_CONS(1) ali_length=56; seq_ab_match=56; sminR=40.0; seq_a_deletion=245; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=223.838843197; seq_a_single=0; score_norm=3.99712219995; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=245; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctgtgatgtatcacaggcttggttcaggattgccc
>M01687:476:000000000-LL5F5:1:1117:28641:12458_CONS(1) ali_length=63; seq_ab_match=51; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=4; seq_b_mismatch=8; score=140.677103026; seq_a_single=0; score_norm=2.2329698893; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttctggcctactat
>M01687:476:000000000-LL5F5:1:1117:28431:16818_CONS(1) ali_length=59; seq_ab_match=59; sminR=40.0; seq_a_deletion=242; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=234.316308897; seq_a_single=0; score_norm=3.97146286265; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=242; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctgtgcacctaatttaatcatttaaattaaatcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1117:20144:18253_CONS(1) ali_length=64; seq_ab_match=63; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=0; score=247.38151591; seq_a_single=0; score_norm=3.86533618609; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttaacgatttattactccgtcattaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:1117:19701:19290_CONS(1) ali_length=63; seq_ab_match=59; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=2; seq_b_mismatch=2; score=209.908540641; seq_a_single=0; score_norm=3.33188159747; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctaacctatgaaa
>M01687:476:000000000-LL5F5:1:1117:24949:20842_CONS(1) ali_length=78; seq_ab_match=75; sminR=40.0; seq_a_deletion=223; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=3; score=272.300368427; seq_a_single=0; score_norm=3.49103036445; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=223; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatccttttttctttctgaac
>M01687:476:000000000-LL5F5:1:1117:18658:22182_CONS(1) ali_length=101; seq_ab_match=101; sminR=40.0; seq_a_deletion=200; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=403.724414718; seq_a_single=0; score_norm=3.99727143285; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=200; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcccgtttcaatccacctctgacggctgtccgcaagaggaa
ctttcaagatacccagaaacgggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:1117:10916:24004_CONS(1) ali_length=74; seq_ab_match=74; sminR=40.0; seq_a_deletion=227; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=295.793203096; seq_a_single=0; score_norm=3.99720544724; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=227; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctcgaccctcatggcttgagccactacatccgaagcttg
gctcaggattgccc
>M01687:476:000000000-LL5F5:1:2118:21009:1667_CONS(1) ali_length=66; seq_ab_match=65; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=1; seq_b_mismatch=0; score=257.789423373; seq_a_single=0; score_norm=3.90590035414; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccaatgagtctctgcacctatcggaagagcgtcgtgtagggaaagagtgttggctcagga
ttgccc
>M01687:476:000000000-LL5F5:1:2118:25693:4798_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.827746872; seq_a_single=0; score_norm=3.99703011848; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctaatttaatcatttaaattaaatcttggctcaggattgcc
>M01687:476:000000000-LL5F5:1:2118:11796:4870_CONS(1) ali_length=108; seq_ab_match=107; sminR=40.0; seq_a_deletion=193; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=422.146596921; seq_a_single=0; score_norm=3.90876478631; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=193; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcctttccctatacgacgctcttccgatctccattgagtc
tctgcacctatcctttccctacatgacgctcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2118:19772:5429_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.846121655; seq_a_single=0; score_norm=3.99709663499; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgtactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2118:5451:5594_CONS(1) ali_length=61; seq_ab_match=61; sminR=40.0; seq_a_deletion=240; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=243.181535919; seq_a_single=0; score_norm=3.98658255605; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=240; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatacatctttccccacacgacactcttggctcaggattgcc
c
>M01687:476:000000000-LL5F5:1:2118:26744:7851_CONS(1) ali_length=107; seq_ab_match=80; sminR=40.0; seq_a_deletion=195; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=9; seq_b_mismatch=16; score=167.514982058; seq_a_single=0; score_norm=1.56556057998; obiclean_internalcount=1; direction=right; seq_b_insertion=1; obiclean_head=False; seq_b_deletion=195; obiclean_headcount=0; seq_a_insertion=1; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
caattgagtctctgcacct
>M01687:476:000000000-LL5F5:1:2118:5991:8873_CONS(1) ali_length=64; seq_ab_match=63; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=248.013813358; seq_a_single=0; score_norm=3.87521583371; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctgttaacgatttattactccgtcgttaacttggctcaggatt
gccc
>M01687:476:000000000-LL5F5:1:2118:6775:9636_CONS(1) ali_length=63; seq_ab_match=57; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=2; seq_b_mismatch=4; score=188.922429007; seq_a_single=0; score_norm=2.99876871439; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatct
>M01687:476:000000000-LL5F5:1:2118:2578:10953_CONS(1) ali_length=52; seq_ab_match=52; sminR=40.0; seq_a_deletion=249; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=207.808253536; seq_a_single=0; score_norm=3.996312568; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=249; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttcgatttctcgaacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2118:14446:15454_CONS(1) ali_length=64; seq_ab_match=63; sminR=40.0; seq_a_deletion=237; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=1; score=247.722834959; seq_a_single=0; score_norm=3.87066929624; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=237; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttttaacgatttattactccgtcgttaacttggctcaggatt
ggcc
>M01687:476:000000000-LL5F5:1:2118:17103:16357_CONS(1) ali_length=65; seq_ab_match=65; sminR=40.0; seq_a_deletion=236; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=259.799934178; seq_a_single=0; score_norm=3.99692206428; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=236; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcaagcctactatttgtccttcagcttgcttggctcaggat
tgccc
>M01687:476:000000000-LL5F5:1:2118:15086:17071_CONS(1) ali_length=63; seq_ab_match=63; sminR=40.0; seq_a_deletion=238; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=251.820766043; seq_a_single=0; score_norm=3.99715501655; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=238; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttctggcctactactgtcctcgaccagcttggctcaggattg
ccc
>M01687:476:000000000-LL5F5:1:2118:15163:23154_CONS(1) ali_length=72; seq_ab_match=57; sminR=40.0; seq_a_deletion=232; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=10; score=101.267479651; seq_a_single=0; score_norm=1.40649277293; obiclean_internalcount=0; direction=right; seq_b_insertion=2; obiclean_head=True; seq_b_deletion=231; obiclean_headcount=0; seq_a_insertion=3; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcctggctacttgctgcttaccctt
>M01687:476:000000000-LL5F5:1:2119:19300:4473_CONS(1) ali_length=66; seq_ab_match=61; sminR=40.0; seq_a_deletion=235; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=3; seq_b_mismatch=2; score=208.921225871; seq_a_single=0; score_norm=3.16547311926; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=235; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcgga
>M01687:476:000000000-LL5F5:1:2119:15016:8696_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.846449881; seq_a_single=0; score_norm=3.99710282794; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgtgtctctgcacctatctgaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2119:7825:10229_CONS(1) ali_length=58; seq_ab_match=58; sminR=40.0; seq_a_deletion=243; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=231.82854111; seq_a_single=0; score_norm=3.99704381223; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=243; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcccaacattttcacattgggcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2119:27077:10719_CONS(1) ali_length=49; seq_ab_match=49; sminR=40.0; seq_a_deletion=252; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=195.81989006; seq_a_single=0; score_norm=3.99632428694; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=252; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgtacctatctgaactccagttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2119:24008:11377_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=211.845465308; seq_a_single=0; score_norm=3.99708425109; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgtacctatctaaactccagtcacttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2119:2523:11475_CONS(1) ali_length=53; seq_ab_match=53; sminR=40.0; seq_a_deletion=248; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=0; seq_b_mismatch=0; score=206.510503147; seq_a_single=0; score_norm=3.89642458767; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=248; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatctgaactccagtcacttggatcaggattgccc
>M01687:476:000000000-LL5F5:1:2119:24670:15475_CONS(1) ali_length=47; seq_ab_match=47; sminR=40.0; seq_a_deletion=254; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=187.859609116; seq_a_single=0; score_norm=3.99701295991; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=254; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcggaagagcacagatcggaagagccc
>M01687:476:000000000-LL5F5:1:2119:11838:23014_CONS(1) ali_length=79; seq_ab_match=79; sminR=40.0; seq_a_deletion=222; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=1; seq_a_mismatch=0; seq_b_mismatch=0; score=315.740401479; seq_a_single=0; score_norm=3.99671394277; obiclean_internalcount=0; direction=right; seq_b_insertion=0; obiclean_head=True; seq_b_deletion=222; obiclean_headcount=0; seq_a_insertion=0; merged_ali_dir={}; count=1; obiclean_status={'XXX': 's'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcaccttcccggctactaatggctgtgaggccatcgcccttcgccgg
gcttggctcaggattgccc
>M01687:476:000000000-LL5F5:1:2119:16486:24247_CONS(1) ali_length=83; seq_ab_match=60; sminR=40.0; seq_a_deletion=224; obiclean_samplecount=1; sminL=40.0; obiclean_singletoncount=0; seq_a_mismatch=3; seq_b_mismatch=14; score=111.950581066; seq_a_single=0; score_norm=1.34880218152; obiclean_internalcount=1; direction=right; seq_b_insertion=0; obiclean_head=False; seq_b_deletion=218; obiclean_headcount=0; seq_a_insertion=6; merged_ali_dir={}; count=1; obiclean_status={'XXX': 'i'}; mode=alignment; seq_b_single=0; 
ccattgagtctctgcacctatcc