Mercurial > repos > padge > trimal
view trimal_repo/dataset/example.088.AA.strNOG.ENOG411BSXF.fasta @ 0:b15a3147e604 draft
"planemo upload for repository https://github.com/inab/trimal commit cbe1e8577ecb1a46709034a40dff36052e876e7a-dirty"
| author | padge |
|---|---|
| date | Fri, 25 Mar 2022 17:10:43 +0000 |
| parents | |
| children |
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>88036.EFJ36971 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTVKRRNGGRNKHGRGHVDPIRCSNCGRCVPKDKAVKRFLVRNIVE QAAVRDVQDACVYESYTLPKLYGKMQYCVSCAIHSHVVRVRSREKRRDRN PPVRPFQRRKDFVP------R-PGGPG---AA---G---GPGGPG----- A---------PRPPPPR--- >88036.EFJ33618 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTVKRRNGGRNKHGRGHVDPIRCSNCGRCVPKDKAVKRFLVRNIVE QAAVRDVQDACVYESYTLPKLYGKMQYCVSCAIHSHVVRVRSREKRRDRN PPVRPFQRRKDFVP------R-PGGPG---AA---G---GPGGPG----- A---------PRPPPPR--- >3218.PP1S169_19V6.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTVKRRSGGRNKHGRGHVNPIRCSNCGRCVPKDKAVKRFLVRNIVE QAAVRDVQEACVYDGYVLPKLYAKMQYCISCAIHSHVVRVRSREARRIRE PPQR-FR-RKEDGP-----PRVQGAPG---A--------K---------- -----------------A-- >3218.PP1S375_10V6.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTVKRRSGGRNKHGRGHVNPIRCSNCGRCVPKDKAVKRFLVRNIVE QAAVRDVQEACVYDGYVLPKLYAKMQYCISCAIHSHVVRVRSREARRVRE PPQR-FR-RKEDGP-----PRAPGAPG---A--------RPGA------- -------------PGAKP-- >3218.PP1S270_77V6.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTVKRRSGGRNKHGRGHVNPIRCSNCGRCVPKDKAVKRFLVRNIVE QAAVRDVQEACVYDGYVLPKLYAKMQYCISCAIHSHVVRVRSREARRIRE PPQR-FR-RKEDGP-----PRAPGAPG---A--------RPGA------- -------------AVAKS-- >4577.GRMZM5G827266_P02 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVE QAAIRDVQEACVYDGYVLPKLYAKVHHCVSCAIHAHIVRVRSREKRRDRK PPER-FR-RREDRPA------G-GQ-----GGPRPG-PGAAAT------A P--------APAPVAARP-- >4558.Sb09g023400.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVE QAAIRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAHIVRVRSREKRRDRK PPER-FR-RREDRPA------G-GQ-----GGPRPG-PGPAGA------A P--------APAPVAARP-- >4577.GRMZM2G129015_P01 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVE QAAVRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAHIVRVRSRENRRNRE PPQR-FR-RRDDGP-----R-P-GQ-----GP---P---RPGAAA-TAAP P-----------AAAPRA-- >4555.Si037993m -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVE QAAVRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAHIVRVRSRENRRNRE PPQR-FR-RRDDGP-----R-P-GQ-----GA---P---RPGGGAPPAAA P-----------AAAPRT-- >4558.Sb01g003630.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVE QAAVRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAHIVRVRSRENRRNRE PPQR-FR-RRDDGP-----R-P-GQ-----GP---P---RPGGAA-PAAA P-----------AAAPRT-- >4577.GRMZM5G899149_P01 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVE QAAVRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAHIVRVRSRENRRNRE PPQR-FR-RRDDGP-----R-P-GQ-----GP---P---RPGGAA-PAAA A-----------AAAPRT-- >15368.BRADI1G04070.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVE QAAVRDVQEACVHDGYILPKLYAKVHHCVSCAIHAHIVRVRSRENRRNRE PPQR-FR-RREDGP-----R-P-GQG----GP---P---RAGGPGGPGGA PPVPG---A--GAPAPRV-- >4513.MLOC_69944.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFLVRNIVE QAAVRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAHIVRVRSRENRRNRE PPQR-FR-RRDDGP-----R-P-GQG----GP---P---RAGGPGGPGGA PAGAG---AVPGAPAPRALI >4533.OB05G27750.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVE QAAIRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAHIVRVRSRENRRDRR PPER-FR-RREDRPS--GPR-P-GGPG---GP---G---APAA------G P--------GGAPNVARP-- >15368.BRADI2G53590.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVE QAAIRDLQEACVYDGYVLPKLYAKVHHCVSCAIHAHIVRVRSRTNRRNRA PPER-FR-RREDRPGGQGPR-P-GAAG---GA---PGAGAPGG------A P--GGFIPGAPAPNVAST-- >39947.LOC_Os01g60790.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVE QAAIRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAHIVRVRSRENRRDRR PPER-FR-RREDRPQ--GPR-P-G--G---GA---P---APGG------A A--------APAPNVART-- >39946.BGIOSGA004709-PA -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVE QAAIRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAHIVRVRSRENRRDRR PPER-FR-RREDRPQ--GPR-P-G--G---GA---P---APGG------A A--------APAPNVART-- >4538.ORGLA01G0293400.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVE QAAIRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAHIVRVRSRENRRDRR PPER-FR-RREDRPQ--GPR-P-G--G---GA---P---APGG------A A--------APAPNVART-- >4533.OB01G44280.1 -------------------------------------------------- -------------------------------------------------- ------------------------------------------------VL SASAQTFKRRNTGRNKHGRGHVNYIRCSNCAKCCPKDKAIKRFQVRNIVE QAAIRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAHIVRVRSRENRRDRR PPER-FR-RREDRPQ--GPR-P-GG-----GA---P---APG-------- A--------APAPNVART-- >3711.Bra003237.1-P MEQAPPPANVVESITSFQLHRNLNLPPGYGFHASDAQLLQLFLGPFVDER ELKTCPIHNITGDVYSSSPDVLTGAYEHDGEDKWFFFCTNKYDDDVTSRA GRVIVGGGGEWVKMGPSKKLFANNTLLGFKRTQDFYVQGMDLSYWRMEEL SLRAKTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVE QAAIRDVQEASVYDGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRT PPPR-FVRRKEDAPK------P-GQPG---QA---P---RPAGG-A---- -P-A----------AARA-- >3711.Bra000193.1-P -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVE QAAIRDVQEASVYDGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRT PPPR-FVRRKEDAPK------P-GQPG---QA---P---RPAGA-A---- ---A----------APRA-- >3711.Bra007238.1-P -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- MASLPTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFLVRNIVE QAAIRDVQEASVYDGYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRVRT PPPR-FARRKEDTPK------P-GQPG---QA---P---RPAGG-A-P-- ---A----------APRA-- >3702.AT2G40590.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVE QAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRT PPPR-FTRRKEDTPK------P-GQPG---QA---P---RPAGP-GAAA- --------------APRV-- >3702.AT2G40510.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVE QAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRT PPPR-FARRKEDTPK------P-GQPG---QA---P---RPAGP-GAAA- -A-A----------APRV-- >3702.AT3G56340.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVE QAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRT PPPR-FARRKEDTPK------P-AQPG---QA---P---RPAGG-A---- -P-A----------APRA-- >59689.fgenesh2_kg.5__2066__AT3G56340.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVE QAAIRDVQEASVYEAYTLPKLYAKMQYCVSCAIHSHVVRVRSRTNRRVRT PPPR-FARRKEDTPK------P-GQPG---QA---P---RPAGG-A-P-- ---A----------APRA-- >59689.Al_scaffold_0004_2658 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVE QAAIRDVQEASVYEAYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRT PPPR-FARRKEDTPK------P-GQPG---QA---P---RPAGP-GP--- -A-A----------APRV-- >59689.fgenesh2_kg.4__2176__AT2G40590.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVE QAAIRDVQEASVYEAYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRT PPPR-FARRKEDTPK------P-GQPG---QA---P---RPAGP-GA--- -A-A----------APRA-- >4641.GSMUA_Achr10P13150_001 -------------------------------------------------- -------------------------------------------------- ----------------------MWESDG-----------SDQKNRLVGSS DAPKMTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVE QAAVRDVQEACAYDGYMLPKLYIKMQYCVSCAIHSKVVRVRSRTDRRNRE PPQR-YR-RRDDLAR------P----G---QG---P---RPVGA-AT--- ---N----------PPRP-- >4113.PGSC0003DMT400065105 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVE QAAVRDVQEACAFELYTLPKLYLKMQYCVSCAIHSKVVRVRSRTDRRVRE PPQR-FRRPRDDLPK------A----G---QA---P---RPAGG-AP--- -P-A----------AART-- >4081.Solyc04g008810.2.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVE QAAVRDVQEACAFELYTLPKLYLKMQYCVSCAIHSKVVRVRSRTDRRVRE PPQR-FRRPRDDLPK------A----G---QA---P---RPAGG-AP--- -P-A----------AART-- >4113.PGSC0003DMT400053000 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVE QAAVRDVQEACAFELYTLPKLYLKMQYCVSCAIHSKVVRVRSRTDRRVRE PPQR-FRRPRDDLPK------T----G---QA---P---RPAGG-P---- -P-A----------APRT-- >4081.Solyc06g007470.2.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVE QAAVRDVQEACAFELYTLPKLYLKMQYCVSCAIHSKVVRVRSRTDRRVRE PPQR-FRRPRDDLPK------T----G---QA---P---RPAGG-P---- -P-A----------APRT-- >4641.GSMUA_Achr3P17860_001 -------------------------------------------------- -------------------------------------------------- -------------------------------------------MCQRSGY ITAKMTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVE QAAVRDVQEACAYDGYTLPKLYIKMQYCVSCAIHSKVVRVRSRTDRRNRE PPPR-FR-RRDDLAR------P----G---QG---P---RPAGV-GN--- ---P----------PPRP-- >4641.GSMUA_Achr6P23430_001 -------------------------------------------------- -------------------------------------------------- ----------------------MSTRQHYIFSPPCDVARLAFSQTLTRSE WAATMTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVE QAAVRDVQEACAYDGYTLPKLYIKMQYCVSCAIHSKVVRVRSRTDRRNRE PPQR-FR-RRDDLPR------P----G---QG---P---RPAGA-GN--- ---P----------P-RP-- >3694.POPTR_0019s08500.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHTKFIRCSNCGKCCPKDKAIKRFLVRNIVE QAAVRDVQESCVYDGYVLPKLYVKMQYCVSCAIHSRVVRVRSRSERRNRE PPQR-FIRRRDDMPK------P-GQPGQPGQA---P---RPAGG-A---- ---------P----AART-- >3694.POPTR_0013s09160.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVE QAAVRDVQESCVYDGYVLPKLYVKMQYCVSCAIHSRVVRVRSSSERRKRE PPQR-FIRRRDDMPK------P-GQPGQPGQA---P---RPTGA-A---- ---------P----A-RV-- >3847.GLYMA06G14950.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVE QAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRE PPQR-FIRRRDDAPR------P-GQPG---QA---P---RPAGV-GA--- ---------P----A-RT-- >3847.GLYMA04G39940.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVE QAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRE PPQR-FIRRRDDAPR------P-GQPG---QA---P---RPAGV-GA--- ---------P----A-RA-- >3847.GLYMA17G18200.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVE QAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRD PPQR-FIRRRDDAQR------P-GQPG---QA---P---RPAGT-AA--- ---------P----V-RT-- >3847.GLYMA05G21370.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVE QAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRE PPQR-FIRRRDDAQR------P-GQPG---QA---P---RPAGT-GA--- ---------P----V-RT-- >3847.GLYMA14G38950.2 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVE QAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRE PPQR-FIRRRDDAPR------P-GQPG---QG---P---RPAGT-AA--- ---A-----P----V-RT-- >3847.GLYMA02G40660.1 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVE QAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRE PPQR-FIRRRDDAPR------P-GQPGG--QG---P---RPAGT-AA--- ---------P----V-RT-- >29760.VIT_06s0004g07940.t01 -------------------------------------------------- -------------------------------------------------- -------------------------------------------------- ----MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVE QAAVRDVQEACVYDTYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRD PPLR-FR-RRDDMPK------P----G---QA---P---RPAGA-A---- ---------A----A-RP-- >29760.VIT_13s0067g02700.t01 -------------------------------------------------- -------------------------------------------------- ----------------------MGGRTGLISNPSP------AQFAAPRTR SLTVMTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVE QAAVRDVQEACVYDTYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKRD PPQR-FR-RRDDMPK------P----G---QA---P---RPAGG-A---- ---------P----V-RT--