Mercurial > repos > perssond > quantification
view macros.xml @ 1:aba3655fdef0 draft
"planemo upload for repository https://github.com/ohsu-comp-bio/quantification commit 897a7dc7cb43e45d6f0fdfe2b2970e59f20f8853"
author | watsocam |
---|---|
date | Fri, 11 Mar 2022 23:35:52 +0000 |
parents | 928db0f952e3 |
children | 261464223fa3 |
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<?xml version="1.0"?> <macros> <xml name="requirements"> <requirements> <container type="docker">labsyspharm/quantification:@VERSION@</container> <requirement type="package" version="3.9">python</requirement> <requirement type="package" version="0.18.0">scikit-image</requirement> <requirement type="package">h5py</requirement> <requirement type="package">pandas</requirement> <requirement type="package">numpy</requirement> <requirement type="package">pathlib</requirement> </requirements> </xml> <xml name="version_cmd"> <version_command>echo @VERSION@</version_command> </xml> <xml name="citations"> <citations> </citations> </xml> <token name="@VERSION@">1.5.1</token> <token name="@CMD_BEGIN@"><![CDATA[ QUANT_PATH=""; if [ -f "/app/CommandSingleCellExtraction.py" ]; then export QUANT_PATH="/app/CommandSingleCellExtraction.py"; else export QUANT_PATH="${__tool_directory__}/CommandSingleCellExtraction.py"; fi; ]]></token> </macros>