Mercurial > repos > peterjc > blastxml_to_top_descr
changeset 12:fe1ed74793c9 draft
Uploaded v0.1.1, embed citation in tool XML
| author | peterjc |
|---|---|
| date | Wed, 30 Jul 2014 05:36:52 -0400 |
| parents | 98f8431dab44 |
| children | 8dc4ba7eba5d |
| files | tools/blastxml_to_top_descr/README.rst tools/blastxml_to_top_descr/blastxml_to_top_descr.xml tools/blastxml_to_top_descr/repository_dependencies.xml |
| diffstat | 3 files changed, 6 insertions(+), 2 deletions(-) [+] |
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--- a/tools/blastxml_to_top_descr/README.rst Fri Jun 13 07:07:35 2014 -0400 +++ b/tools/blastxml_to_top_descr/README.rst Wed Jul 30 05:36:52 2014 -0400 @@ -69,6 +69,7 @@ v0.1.0 - Switch to using an optparse based API for Python script internally. - Support BLAST XML with multiple ``<Iteration>`` blocks per query. - Support the default 25 column extended tabular BLAST output. +v0.1.1 - Embed citation information in the tool XML (new Galaxy feature). ======= ======================================================================
--- a/tools/blastxml_to_top_descr/blastxml_to_top_descr.xml Fri Jun 13 07:07:35 2014 -0400 +++ b/tools/blastxml_to_top_descr/blastxml_to_top_descr.xml Wed Jul 30 05:36:52 2014 -0400 @@ -1,4 +1,4 @@ -<tool id="blastxml_to_top_descr" name="BLAST top hit descriptions" version="0.1.0"> +<tool id="blastxml_to_top_descr" name="BLAST top hit descriptions" version="0.1.1"> <description>Make a table from BLAST output</description> <version_command interpreter="python">blastxml_to_top_descr.py --version</version_command> <command interpreter="python"> @@ -108,4 +108,7 @@ Tool Shed at http://toolshed.g2.bx.psu.edu/view/peterjc/blastxml_to_top_descr </help> + <citations> + <citation type="doi">10.7717/peerj.167</citation> + </citations> </tool>
--- a/tools/blastxml_to_top_descr/repository_dependencies.xml Fri Jun 13 07:07:35 2014 -0400 +++ b/tools/blastxml_to_top_descr/repository_dependencies.xml Wed Jul 30 05:36:52 2014 -0400 @@ -1,4 +1,4 @@ <?xml version="1.0"?> <repositories description="Requires BLAST XML and database datatype definitions."> -<repository changeset_revision="de11e1a921c4" name="blast_datatypes" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> +<repository changeset_revision="de11e1a921c4" name="blast_datatypes" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" /> </repositories>