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changeset 9:ed4d9ede9cb4 draft

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Uploaded
author petr-novak
date Wed, 03 Jul 2019 09:21:52 -0400
parents cc10173bd0c5
children d0431a839606
files configuration.py dante_gff_to_dna.xml dom_prot_seq.fa tests.sh tmp/multifasta.gff3 tmp/multifasta_win.gff3 tmp/single_fasta.gff3 tmp/single_fasta_filtered.gff3
diffstat 8 files changed, 71 insertions(+), 291 deletions(-) [+]
line wrap: on
line diff
--- a/configuration.py	Wed Jul 03 08:10:33 2019 -0400
+++ b/configuration.py	Wed Jul 03 09:21:52 2019 -0400
@@ -2,118 +2,6 @@
 ''' configuration file to set up the paths and constants '''
 import os
 
-######## PROFREP #######################################################
-## Constansts
-N_segment = 50
-MAX_FILES_SUBPROFILES = 1000
-MAX_PIC_NUM = 50
-IMAGE_RES = 300
-FASTA_LINE = 60
-SEQ_LEN_VIZ = 200000
-FORBIDDEN_CHARS = "\\/"
-HTML_STR = '''
-	<!DOCTYPE html>
-	<html>
-	<body>
-		<h2>PROFREP OUTPUT</h2>
-		<h4> Sequences processed: </h4>
-		{}
-		<h4> Total length: </h4>
-		<pre> {} bp </pre>
-		<h4> Database: </h4>
-		<pre> {} </pre>
-		<hr>
-		<h3> Repetitive profile(s)</h3> </br>
-		{} <br/>
-		<h4>References: </h4>
-		{}
-		</h6>
-	</body>
-	</html>
-	'''
-
-## IO
-DOMAINS_GFF = "output_domains.gff"
-N_GFF = "N_regions.gff"
-REPEATS_GFF = "output_repeats.gff"
-HTML = "output.html"
-LOG_FILE = "log.txt"
-PROFREP_DATA = "tool_data/profrep"
-PROFREP_TBL = "prepared_datasets.txt"
-PROFREP_OUTPUT_DIR = "profrep_output_dir"
-## JBrowse and Tracks Conf
-jbrowse_data_dir = "data"
-JSON_CONF_R = """{"hooks" : {"modify": "function( track, f, fdiv ) {fdiv.style.backgroundColor = '#278ECF'}"}}"""
-JSON_CONF_N = """{"hooks" : {"modify": "function( track, f, fdiv ) {fdiv.style.background = '#474747'}"}}"""
-COLORS_HEX = ["#7F7F7F", "#00FF00", "#0000FF", "#FF0000", "#01FFFE", "#FFA6FE",
-              "#FFDB66", "#006401", "#010067", "#95003A", "#007DB5", "#FF00F6",
-              "#774D00", "#90FB92", "#0076FF", "#D5FF00", "#FF937E", "#6A826C",
-              "#FF029D", "#FE8900", "#7A4782", "#7E2DD2", "#85A900", "#FF0056",
-              "#A42400", "#00AE7E", "#683D3B", "#BDC6FF", "#263400", "#BDD393",
-              "#00B917", "#9E008E", "#001544", "#C28C9F", "#FF74A3", "#01D0FF",
-              "#004754", "#E56FFE", "#788231", "#0E4CA1", "#91D0CB", "#BE9970",
-              "#968AE8", "#BB8800", "#43002C", "#DEFF74", "#00FFC6", "#FFE502",
-              "#620E00", "#008F9C", "#98FF52", "#7544B1", "#B500FF", "#00FF78",
-              "#FF6E41", "#005F39", "#6B6882", "#5FAD4E", "#A75740", "#A5FFD2",
-              "#FFB167", "#009BFF", "#E85EBE"]
-COLORS_RGB = ["127,127,127", "0,255,0", "0,0,255", "255,0,0", "1,255,254",
-              "255,166,254", "255,219,102", "0,100,1", "1,0,103", "149,0,58",
-              "0,125,181", "255,0,246", "119,77,0", "144,251,146", "0,118,255",
-              "213,255,0", "255,147,126", "106,130,108", "255,2,157",
-              "254,137,0", "122,71,130", "126,45,210", "133,169,0", "255,0,86",
-              "164,36,0", "0,174,126", "104,61,59", "189,198,255", "38,52,0",
-              "189,211,147", "0,185,23", "158,0,142", "0,21,68", "194,140,159",
-              "255,116,163", "1,208,255", "0,71,84", "229,111,254",
-              "120,130,49", "14,76,161", "145,208,203", "190,153,112",
-              "150,138,232", "187,136,0", "67,0,44", "222,255,116",
-              "0,255,198", "255,229,2", "98,14,0", "0,143,156", "152,255,82",
-              "117,68,177", "181,0,255", "0,255,120", "255,110,65", "0,95,57",
-              "107,104,130", "95,173,78", "167,87,64", "165,255,210",
-              "255,177,103", "0,155,255", "232,94,190"]
-TRACK_LIST = '''
-	\t,{}\n
-	\t"storeClass" : "JBrowse/Store/SeqFeature/BigWig",
-	\t"urlTemplate" : "{}",
-	\t"type" : "JBrowse/View/Track/Wiggle/XYPlot",
-	\t"label" : "{}",
-	\t"key" : "{}",
-	\t"style": {}
-	\t\t"pos_color": "{}"
-	\t {},
-	\t"scale" : "log"
-	\t{}\n
-	'''
-
-## GFF tracks
-HEADER_GFF = "##gff-version 3"
-SOURCE_PROFREP = "profrep"
-SOURCE_DANTE = "dante"
-PHASE = "."
-DOMAINS_FEATURE = "protein_domain"
-REPEATS_FEATURE = "repeat"
-N_NAME = "N"
-N_FEATURE = "N_region"
-HEADER_WIG = "variableStep\tchrom="
-GFF_EMPTY = "."
-
-######### BIG WIG ######################################################
-CHROM_SIZES_FILE = "chrom_sizes.txt"
-
-######### EXTRACT_DATA_DOR_PROFREP #####################################
-HITSORT_CLS = "seqclust/clustering/hitsort.cls"
-READS_ALL = "seqclust/sequences/sequences.fasta"
-ANNOTATION = "PROFREP_CLASSIFICATION_TEMPLATE.csv"
-
-######### PROFREP_DB_REDUCING ##########################################
-MEM_LIM = 1500  # MB
-CLS_REDUCED = "hitsort_reduced.cls"
-READS_ALL_REDUCED = "reads_all_reduced"
-
-######### PROFREP_REFINING #############################################
-WITH_DOMAINS = "mobile_element"
-QUALITY_DIFF_TO_REMOVE = 0.05  # 5% tolerance of PID
-
-######### DANTE ##############################################
 MAIN_GIT_DIR = os.path.dirname(os.path.realpath(__file__))
 TOOL_DATA = os.path.join(MAIN_GIT_DIR, "tool-data")
 TMP = "tmp"
@@ -126,3 +14,10 @@
 FILT_DOM_GFF = "domains_filtered.gff"
 EXTRACT_DOM_STAT = "domains_counts.txt"
 EXTRACT_OUT_DIR = "extracted_domains"
+FASTA_LINE = 60
+SOURCE_PROFREP = "profrep"
+SOURCE_DANTE = "dante"
+DOMAINS_FEATURE = "protein_domain"
+PHASE = "."
+HEADER_GFF = "##gff-version 3"
+DOMAINS_GFF = "output_domains.gff"
--- a/dante_gff_to_dna.xml	Wed Jul 03 08:10:33 2019 -0400
+++ b/dante_gff_to_dna.xml	Wed Jul 03 09:21:52 2019 -0400
@@ -1,5 +1,8 @@
 <tool id="domains_extract" name="Extract Domains Nucleotide Sequences" version="1.0.0">
   <description> Tool to extract nucleotide sequences of protein domains found by DANTE </description>
+  <requirements>
+    <requirement type="package">biopython</requirement>
+  </requirements>
   <command>
     TEMP_DIR_LINEAGES=\$(mktemp -d) &amp;&amp;
     python3 ${__tool_directory__}/dante_gff_to_dna.py --domains_gff ${domains_gff} --input_dna ${input_dna} --out_dir \$TEMP_DIR_LINEAGES
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/dom_prot_seq.fa	Wed Jul 03 09:21:52 2019 -0400
@@ -0,0 +1,57 @@
+>scaffold146.1|size86774:976-1289 RH Class_I|LTR|Ty1/copia|Bianca
+ISWRSTKQTIVAISSNHVELLAIHDTSRECVWLRFMIESIIMXXXXXXXXXXXXXXXXXX
+QLKE*YIKCDRTKHISPKFFFTQDLQKNGDVIIQQIRSNDNVVD
+>scaffold146.1|size86774:6810-7049 PROT Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand
+LVDSGASCNLMSKRVMKQMGIPDEKLEFLDATLYAFDRRTIIPAGKIQLPVTLGEEERTR
+SEMVEFIIVDMDLAYNAILG
+>scaffold146.1|size86774:8801-9241 RT Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat
+DFKGVNKHCQPDPFPLPHIDRLVDAVAGSSLLSTMDAYSGYHQISLAREDQAKSSFLTED
+GVFCYVVMPFGLRNAGATYQRLVNKIFADLLGKEMEIYVDDMIVKSLNDEDHIIYLSHCF
+EVCRTHRLKLNPAKCCFGVRSGKFLGY
+>scaffold146.1|size86774:10819-11667 INT Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand
+RDAMDCVRRCQSCQYFAPINRKPGAEITLTELPCPFDRWGIDILGPFPQSVRQRRFCIVA
+VEYHSKWIEAEAVASITSEAVKKFVMNNIIVRFGCPRVLVSDNGPQFISDKFATFCEEYG
+IQQRTSSVYHPQTNGQAEASNKIILHGLRRNLDSLGGSWPDQLPHVLWAYRTTPKSSTGE
+TPFSLVYGSEAVAPVESTIITPRIAAYMHTESANTEFRELDLDLLEERRNEVYGRVRKQQ
+RALRKRYNQRVRPRQFEKGDLILRSVESQGHKGKLDRAWEGPY
+>scaffold146.1|size86774:14592-14828 PROT Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila
+MVDLGASINLMPYSIYSALQLGPLQGTAIVIKLADRSNTHPEGVIEDVLVQVNNLVFPAD
+FYVLKMGKAENNDCPLLLG
+>scaffold146.1|size86774:15420-15995 RT Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila
+IYAISDSDWVSPVHVVPKKTGFTVERNKNGELVPKRVTNGWRVCIDYRKLNDATRKDHFP
+LPFIDQMLERLAGKKFYCFLDGYSGYNQVAIAPEDQEKTTFTCTYGTYAFRKMPFGLCNA
+PATFQRCMLSIFSEFTGKFIEVFMDDFTVYGDSFEGALENLEKVLQRCVEKKLVLNSEKC
+HFMVRQGIVLGH
+>scaffold146.1|size86774:16188-16634 RH Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila
+FNQECQEAFNKLKSLLTAAPIIQPPNWELPFELMCDASNYALGAVLGQKIEGKRHVIYYA
+SKTLSEAQIHYTTTEKELLAIVYALEKFRSYLLGTKITVHSDHAALRHLLSKKESKPRLI
+RWILLLQEFDLEIKDRAGTENAVADNLSR
+>scaffold146.1|size86774:24873-25481 INT Class_I|LTR|Ty1/copia|Bianca
+HDRLGHPGMIMMRKIIRTTSGHSLKNREILHPREYICTACAQGKLITRPSPVKIMNERIT
+FLERIQGDICGPIHPACGPFRYFIVLIDASSRWSHVSLLSTRNHAFARLLSQIIRLRAHF
+PDYPVKKIRLDNAAEFTSRTFNNYCLAMGIDVEHPVEYVHTQNGLAESLIKRLQLIARPL
+LMKSKLPVTCWGHAIIHASSLIR
+>scaffold146.1|size86774:26322-27032 RT Class_I|LTR|Ty1/copia|Bianca
+WKDAIESELKSLNKRDVFGPVVRTPEGVQPVGYKWVFVRKRNDKGEISRYKARLVAQGFS
+QRPGIDYDETYSPVMDATTFRFLISLAIEYGLDLQLMDVVTAYLYGSLDCEIYMKIPEGF
+HMPERYSSEPRTDYAIKLNKSLYGLKQSGRMWYNRLSEYLIKEGYKNNLVCPCVFMKKFE
+NEFVIIAVYVDDINIVGTQKALLDAVNCLKREFEMKDLGRTKYCLGLQIEYLKNGIF
+>scaffold146.1|size86774:27723-28124 RH Class_I|LTR|Ty1/copia|Bianca
+DAGYRSDPHNGRSQTGYVFLNKGAAISWRSTKQTIAATSSNHAELLAIHETSRECVWLRS
+MIESIYNACGLFTDKMPPTVLYEDNSACIIQLKEGYIKGDRTKHISPKFFFTHDLQKNGE
+VIIQQIRSSDNVAD
+>scaffold146.1|size86774:10299-10658 aRH Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat
+WNMYIDGSTQSGAGVGVHYITPYGDWINLAVKLQFPATNNVAEYEALLAGMNFALSLGVT
+RLKTFSDSQLVVEQFSGHFQAKEPMLEAYKSRSQLLAAKFSEFSLEHIPRESNRAADSLA
+>scaffold146.1|size86774:16812-17666 INT Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila
+HASDYGGHFGPNRTARRILDVGFYWPSIFRDVYQFCRTCDACQRVGNITNRREMPQNYIL
+ANEIFDIWGLDFMGPFPQSQGNNYILVAVDYVSKWVEAIPTRTDDGKTVTEFLRKNIFTR
+YGVPKAIISDRGTHFCNSTMRAMMKKYNVIHKTTTAYHPQGNGQAEATNREIKSILEKVV
+NKKRSNWSQKLPDALWAYRTAYKTPIGTTPFRLIYGKHCNLPVGLEHKAYWAIREMNFEE
+GGDAELRQMQLQELDALRLEAYDNSRIYKERLKTYHDKKLLQQNF
+>scaffold146.1|size86774:19976-20212 PROT Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila
+MVDLGASINLMPYYIYSALKLGSLQGTAIIIKLADRSETHPEGVVKDVLAQVNNLVFPAD
+FYVLKMGEAENDDCPLLLG
+>scaffold146.1|size86774:28912-29124 PROT Class_I|LTR|Ty1/copia|Bianca
+CLVDSATTHTILKNMRYFTSFEKRDVNIATIVCEANIVEGSGRAVIVLPSGTHIRIDDAL
+YANKSRRNLLS
--- a/tests.sh	Wed Jul 03 08:10:33 2019 -0400
+++ b/tests.sh	Wed Jul 03 09:21:52 2019 -0400
@@ -1,7 +1,7 @@
 #!/bin/bash
 
 export DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
-export test_data="$DIR/test_data"
+export TEXT_DATA="$DIR/test-data"
 export classification_tbl=${DIR}/tool-data/protein_domains/Viridiplantae_v3.0_class
 export pdb=${DIR}/tool-data/protein_domains/Viridiplantae_v3.0_pdb
 
@@ -10,13 +10,13 @@
 
 ######## DANTE
 ## single_seq, for/rev strand of mapping
-$DIR/dante.py -q $test_data/GEPY_test_long_1 -pdb $pdb -cs $classification_tbl \
+$DIR/dante.py -q ${TEXT_DATA}/GEPY_test_long_1 -pdb $pdb -cs $classification_tbl \
               --domain_gff $PWD/tmp/single_fasta.gff3
 ## multifasta
-$DIR/dante.py -q $test_data/vyber-Ty1_01.fasta -pdb $pdb -cs $classification_tbl \
+$DIR/dante.py -q ${TEXT_DATA}/vyber-Ty1_01.fasta -pdb $pdb -cs $classification_tbl \
               --domain_gff $PWD/tmp/multifasta.gff3
 ## multifasta_win
-$DIR/dante.py -q $test_data/vyber-Ty1_01.fasta -pdb $pdb -cs $classification_tbl \
+$DIR/dante.py -q ${TEXT_DATA}/vyber-Ty1_01.fasta -pdb $pdb -cs $classification_tbl \
               -wd 3100 -od 1500 --domain_gff $PWD/tmp/multifasta_win.gff3
 
 # test filtering
--- a/tmp/multifasta.gff3	Wed Jul 03 08:10:33 2019 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,58 +0,0 @@
-##gff-version 3
-##-----------------------------------------------
-##PIPELINE VERSION         : dante-rv-3081(adb2509)
-##PROTEIN DATABASE VERSION : Viridiplantae_v3.0_pdb
-##-----------------------------------------------
-Acoerulea195_58_rc	dante	protein_domain	1753	1956	368	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|SIRE;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|SIRE;Best_Hit=Ty1-PROT__REXdb_ID3879|Class_I|LTR|Ty1/copia|SIRE:1753-1956[100percent];Best_Hit_DB_Pos=1:68of68;DB_Seq=WLLDSGASKHMSGNAKLFSSVTAIDGGSVTFGNGKSSPVIGKGFVAGIGLSPNDVCLLVDGLRVNLIS;Query_Seq=WLLDSGASKHMSGNAKLFSSVTAIDGGSVTFGNGKSSPVIGKGFVAGIGLSPNDVCLLVDGLRVNLIS;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Acoerulea195_58_rc	dante	protein_domain	2140	2742	1162	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|SIRE;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|SIRE;Best_Hit=Ty1-INT__REXdb_ID3979|Class_I|LTR|Ty1/copia|SIRE:2140-2742[100percent];Best_Hit_DB_Pos=1:201of201;DB_Seq=HQRLGHVNFEHLDNLTRNEYIKGVPRLGRNRDTVCGGCQLGKQIRSPHSKKKSITTSSPLELIHMDLMGPTRTPSLGGKRYILVMVDDYTRFTWVSFLREKSDAFLEFQGICLRIQNEKDTQIKHIRSDRGGEFTATGVIEYCIANGTWQEFSAPYTPQQNGVAERKNRVIQEMARAMLHAKDVPTKFWAEVVHTACYIMN;Query_Seq=HQRLGHVNFEHLDNLTRNEYIKGVPRLGRNRDTVCGGCQLGKQIRSPHSKKKSITTSSPLELIHMDLMGPTRTPSLGGKRYILVMVDDYTRFTWVSFLREKSDAFLEFQGICLRIQNEKDTQIKHIRSDRGGEFTATGVIEYCIANGTWQEFSAPYTPQQNGVAERKNRVIQEMARAMLHAKDVPTKFWAEVVHTACYIMN;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Acoerulea195_58_rc	dante	protein_domain	2815	2958	128	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|SIRE;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|SIRE;Best_Hit=Ty1-RT__REXdb_ID4340|Class_I|LTR|Ty1/copia|SIRE:2815-2958[100percent];Best_Hit_DB_Pos=1:48of256;DB_Seq=HFHIFGIPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTR;Query_Seq=YMRVFGSVCYVCKDRQSLSKFDSRGEVALLLGYSSNSRAFRVFNYTTR;Identity=0.46;Similarity=0.65;Relat_Length=0.188;Relat_Interruptions=0.0;Hit_to_DB_Length=0.19
-Acoerulea195_58_rc	dante	protein_domain	3268	4199	1404	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|SIRE;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|SIRE;Best_Hit=Ty1-RT__REXdb_ID3881|Class_I|LTR|Ty1/copia|SIRE:3433-4199[82percent];Best_Hit_DB_Pos=1:256of256;DB_Seq=WLVAMQEELGQFKRSDVWTLVPRPTHTNVVGTKWIFKNKLDEFGQIVRNKARLVAQGYSQIEGIDYGETFAPVARLESVRLLLAMACHLNFKLYQMDVKSAFLNGILNEEVYVEQPKGFVDHT-FPNHVFKLQKALYGLKQAPRAWYERLTSFLLGKGFVRGSVDRTLFILRKNTDVLLAQVYVDDIVFGSTCPSLSESFSQLMSSEFEMSLMGELNFFLGLQVKQFDHGAFISQTKYAKELVKKFGLSTSSGQDTP;Query_Seq=WLVAMQEELGQFKRSDVWTLVPRPTHTNVVGTKWIFKNKLDEFGQIVRNKARLVAQGYSQIEGIDYGETFAPVARLESVRLLLAMACHLNFKLYQMDVKSAFLNGILNEEVYVEQPKGFVDHT/FPNHVFKLQKALYGLKQAPRAWYERLTSFLLGKGFVRGSVDRTLFILRKNTDVLLAQVYVDDIVFGSTCPSLSESFSQLMSSEFEMSLMGELNFFLGLQVKQFDHGAFISQTKYAKELVKKFGLSTSSGQDTP;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.33;Hit_to_DB_Length=1.0
-Acoerulea195_58_rc	dante	protein_domain	4260	4346	90	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-RH__REXdb_ID3204|Class_I|LTR|Ty1/copia|Ivana:4260-4346[100percent];Best_Hit_DB_Pos=12:40of134;DB_Seq=YRSLIGCLMYLTATRPDIMHAVSLLSKKQ;Query_Seq=YRSMIGSLLYLTASRPDISYSVGVCARFQ;Identity=0.55;Similarity=0.83;Relat_Length=0.216;Relat_Interruptions=0.0;Hit_to_DB_Length=0.22
-Acoerulea195_58_rc	dante	protein_domain	4467	4844	733	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|SIRE;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|SIRE;Best_Hit=Ty1-RH__REXdb_ID3879|Class_I|LTR|Ty1/copia|SIRE:4467-4844[100percent];Best_Hit_DB_Pos=1:126of126;DB_Seq=DADWGGNLDDRHSTSGGCFYVGNNLVSWHSKKQSSVSISSCEAEYIAAASACTQLLWMRQMLRDYGIQQQAMDLFCDNTSTISISKNPVQHSRTKHIDIRHHFLREAVEKGDIVMEFIPTEHQLAD;Query_Seq=DADWGGNLDDRHSTSGGCFYVGNNLVSWHSKKQSSVSISSCEAEYIAAASACTQLLWMRQMLRDYGIQQQAMDLFCDNTSTISISKNPVQHSRTKHIDIRHHFLREAVEKGDIVMEFIPTEHQLAD;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Egrandis201_33_rc	dante	protein_domain	1161	1367	391	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-PROT__REXdb_ID324|Class_I|LTR|Ty1/copia|Ale:1161-1367[100percent];Best_Hit_DB_Pos=1:69of69;DB_Seq=WIIDTGASDHIVCNQFFFSNIEKLPFPISIQLPNGNTTHVGMTGTVNLSPLITLNNVLYVPSFQFNLIS;Query_Seq=WIIDTGASDHIVCNQFFFSNIEKLPFPISIQLPNGNTTHVGMTGTVNLSPLITLNNVLYVPSFQFNLIS;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Egrandis201_33_rc	dante	protein_domain	1572	2195	1035	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-INT__REXdb_ID324|Class_I|LTR|Ty1/copia|Ale:1584-2123[86percent];Best_Hit_DB_Pos=1:180of180;DB_Seq=HQRLGHTTSFPYPQCHICPLVKQTCAPFQTSNTRLDSIFSLVHVDVWGPYHTLNHDGSWFFLTIVDDLSRATWVFLIQSKNQVLSHLRIFLSLSKTxFGKSICRIRTDNGKELFSGECASFFSSNGILHESTCTYTPQQNEVVERKHRHLLELAWALKFQASIPENFWGDCVVTAVYLIN;Query_Seq=HQRLGHTTSFPYPQCHICPLVKQTCAPFQTSNTRLDSIFSLVHVDVWGPYHTLNHDGSWFFLTIVDDLSRATWVFLIQSKNQVLSHLRIFLSLSKT*FGKSICRIRTDNGKELFSGECASFFSSNGILHESTCTYTPQQNEVVERKHRHLLELAWALKFQASIPENFWGDCVVTAVYLIN;Identity=0.99;Similarity=0.99;Relat_Length=1.0;Relat_Interruptions=0.5;Hit_to_DB_Length=1.0
-Egrandis201_33_rc	dante	protein_domain	2856	3620	1393	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-RT__REXdb_ID324|Class_I|LTR|Ty1/copia|Ale:2856-3619[99percent];Best_Hit_DB_Pos=1:255of255;DB_Seq=WQRAMEVELKALIDNHIWDIVSLPPHRKPIGCKWVYKIN-HKVDGSVERYKARLVAKGFTxRExFDYHETFSSVAKDVTVCSFLSVAAFRNWSMHQMDIHNAFLHGDLEEEIYMDLPQGLRRQGESKVCRLRKSLYGLKxASRQWYTKFTNALTGAGFKQSKHDYALFTWTKVTSSIYLMIYVDDILIMGNDDSVVRKLKEYLHSSFHIKDLGSPKYFLGIEITRSDQGISLSQRKFVMEIISEAGLSGCKLAVIP;Query_Seq=WQRAMEVELKALIDNHIWDIVSLPPHRKPIGCKWVYKIN/YKVDGSVERYKARLVAKGFT*RE*FDYHETFSSVAKDVTVCSFLSVAAFRNWSMHQMDIHNAFLHGDLEEEIYMDLPQGLRRQGESKVCRLRKSLYGLK*ASRQWYTKFTNALTGAGFKQSKHDYALFTWTKVTSSIYLMIYVDDILIMGNDDSVVRKLKEYLHSSFHIKDLGSPKYFLGIEITRSDQGISLSQRKFVMEIISEAGLSGCKLAVIP;Identity=0.98;Similarity=0.98;Relat_Length=1.0;Relat_Interruptions=1.33;Hit_to_DB_Length=1.0
-Egrandis201_33_rc	dante	protein_domain	3914	4294	717	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-RH__REXdb_ID324|Class_I|LTR|Ty1/copia|Ale:3914-4294[100percent];Best_Hit_DB_Pos=1:127of127;DB_Seq=DLDYATCPMSRRSIIGFCIKFGESLLSWKTKKQSTVSLSSAEAKYRSMAKTVCEVVWLRGLLQDLGIQVRGPTLLFCDNDSAIKLAANPILHERTKHIEVDCHFTREKIKEGIIKTRGIRTTEQPAD;Query_Seq=DLDYATCPMSRRSIIGFCIKFGESLLSWKTKKQSTVSLSSAEAKYRSMAKTVCEVVWLRGLLQDLGIQVRGPTLLFCDNDSAIKLAANPILHERTKHIEVDCHFTREKIKEGIIKTRGIRTTEQPAD;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Gmax275_361_rc	dante	protein_domain	560	829	471	+	.	Name=GAG;Final_Classification=Class_I|LTR|Ty1/copia|Tork;Region_Hits_Classifications=GAG|Class_I|LTR|Ty1/copia|Tork;Best_Hit=Ty1-GAG__REXdb_ID5204|Class_I|LTR|Ty1/copia|Tork:560-829[100percent];Best_Hit_DB_Pos=1:90of90;DB_Seq=IRLTLAKSVVFNIVNEKTTAGLMKALSDMYKKPSAANKVYLMRRLFNLKMGEGISVTDHINEFNTILAQLESVQIKFEDEVKALILLSSL;Query_Seq=IRLTLAKSVVFNIVNEKTTAGLMKALSDMYKKPSAANKVYLMRRLFNLKMGEGISVTDHINEFNTILAQLESVQIKFEDEVKALILLSSL;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Gmax275_361_rc	dante	protein_domain	1250	1465	402	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Tork;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Tork;Best_Hit=Ty1-PROT__REXdb_ID5202|Class_I|LTR|Ty1/copia|Tork:1250-1465[100percent];Best_Hit_DB_Pos=1:72of72;DB_Seq=WIMDSGASFHTTPSKDLLSNYVSGRFGKVYLADGKSLDIVGRGDINIKTSSGSLWTLHNVRHIPALKRNLIS;Query_Seq=WIMDSGASFHTTPSKDLLSNYVSGRFGKVYLADGKSLDIVGRGDINIKTSSGSLWTLHNVRHIPALKRNLIS;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Gmax275_361_rc	dante	protein_domain	1637	2230	1123	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Tork;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Tork;Best_Hit=Ty1-INT__REXdb_ID5204|Class_I|LTR|Ty1/copia|Tork:1637-2230[100percent];Best_Hit_DB_Pos=1:198of198;DB_Seq=HQRLGHMSEKGMKLMAAKGKLSSLKHVDVGACEHCILGKQKKVSFSRAGKTLKAEKLELVHTDVWGPAPVESVGNSHYYVTFIDDSTRKVWVYFLKNKSDVFSVFKRWKTKVENQTGLKVKNLKSDNGGEYDSQEFKDFCSEHGIRMIKTIPGTPEQNGVAERMNRTLNERARCMRIQSGLPKAFWAEAINTAAYLIN;Query_Seq=HQRLGHMSEKGMKLMAAKGKLSSLKHVDVGACEHCILGKQKKVSFSRAGKTLKAEKLELVHTDVWGPAPVESVGNSHYYVTFIDDSTRKVWVYFLKNKSDVFSVFKRWKTKVENQTGLKVKNLKSDNGGEYDSQEFKDFCSEHGIRMIKTIPGTPEQNGVAERMNRTLNERARCMRIQSGLPKAFWAEAINTAAYLIN;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Gmax275_361_rc	dante	protein_domain	2777	3549	1427	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Tork;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Tork;Best_Hit=Ty1-RT__REXdb_ID5204|Class_I|LTR|Ty1/copia|Tork:2777-3549[100percent];Best_Hit_DB_Pos=1:258of258;DB_Seq=WELAMKDEMTSLQKNKTW-WSLTEFPEGKKALQNRWVYRLKEESDGRRRYKARLVVKGFQQKQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKTAFLHGDLEEDIYMTQPEGFEVPGKENLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFKRCDMDHCCYVKKYTNSYVILVVYVDDMLIAGSSMAEINRLKLQLAENFEMKDLGPAKQILGMRILRNRSEGILKLSQEKYIHKLLDRFYLGDSKTRNTP;Query_Seq=WELAMKDEMTSLQKNKTC/WSLTEFPEGKKALQNRWVYRLKEESDGRRRYKARLVVKGFQQKQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKTAFLHGDLEEDIYMTQPEGFEVPGKENLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFKRCDMDHCCYVKKYTNSYVILVVYVDDMLIAGSSMAEINRLKLQLAENFEMKDLGPAKQILGMRILRNRSEGILKLSQEKYIHKLLDRFYLGDSKTRNTP;Identity=0.99;Similarity=0.99;Relat_Length=1.0;Relat_Interruptions=0.33;Hit_to_DB_Length=1.0
-Gmax275_361_rc	dante	protein_domain	3835	4212	702	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Tork;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Tork;Best_Hit=Ty1-RH__REXdb_ID5204|Class_I|LTR|Ty1/copia|Tork:3835-4212[100percent];Best_Hit_DB_Pos=1:126of126;DB_Seq=YADLGGDFDTKKSTTGYIFTLGGTTVSWKSKLQDRVALSTTEAEYIAISEAAKEMIWLKNFLNELGKEQDDAPMFSDSQSAISLAKNPVFHSRCKHIQLRYHFIRELINDGDLSLLKILGSENPAD;Query_Seq=YADLGGDFDTKKSTTGYIFTLGGTTVSWKSKLQDRVALSTTEAEYIAISEAAKEMIWLKNFLNELGKEQDDAPMFSDSQSAISLAKNPVFHSRCKHIQLRYHFIRELINDGDLSLLKILGSENPAD;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Sitalica164_1034	dante	protein_domain	3004	3273	486	+	.	Name=GAG;Final_Classification=Class_I|LTR|Ty1/copia|Angela;Region_Hits_Classifications=GAG|Class_I|LTR|Ty1/copia|Angela;Best_Hit=Ty1-GAG__REXdb_ID1933|Class_I|LTR|Ty1/copia|Angela:3004-3273[100percent];Best_Hit_DB_Pos=1:90of90;DB_Seq=MLACMEPELQMQFKTNHEAHDMIVALRDMFQTxARAERFNVSKAFVESKLAEGAAVGPHVIKMVGYTQRLEKLGFPLGQELATDFILSSL;Query_Seq=MLACMEPELQMQFKTNHEAHDMIVALRDMFQT*ARAERFNVSKAFVESKLAEGAAVGPHVIKMVGYTQRLEKLGFPLGQELATDFILSSL;Identity=0.99;Similarity=0.99;Relat_Length=1.0;Relat_Interruptions=1.0;Hit_to_DB_Length=1.0
-Sitalica164_1034	dante	protein_domain	3691	3912	417	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Angela;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Angela;Best_Hit=Ty1-PROT__REXdb_ID1924|Class_I|LTR|Ty1/copia|Angela:3691-3912[100percent];Best_Hit_DB_Pos=1:74of74;DB_Seq=WVFDTGSVAHICNSMQGMIRSRSVERGEVDFRVGNNARVAALTVGTMQLHLPSGFIMELNNCYFVPSLSRNILS;Query_Seq=WVFDTGSVAHICNSMQGMIRSRSVERGEVDFRVGNNARVAALTVGTMQLHLPSGFIMELNNCYFVPSLSRNILS;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Sitalica164_1034	dante	protein_domain	4106	4696	1131	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Angela;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Angela;Best_Hit=Ty1-INT__REXdb_ID1933|Class_I|LTR|Ty1/copia|Angela:4106-4696[100percent];Best_Hit_DB_Pos=1:197of197;DB_Seq=PCRLGHISEKRMKKLHSDGLLTSFDFESYETCEACLLGKMTKTPFTGFPERAVDLLELVHSDVCGPMSTTARGGFQYFITFTDDFSRYGYVYLMRHKSETFEKFKEFQNEVENQCGKKIKALRSDRGGEYLSHEFSNHLKSCRIVPQLTPPGTPQRNGVSERRNRTLLDMVRSMMSQSDLPLSFWGYALETAAFTLN;Query_Seq=PCRLGHISEKRMKKLHSDGLLTSFDFESYETCEACLLGKMTKTPFTGFPERAVDLLELVHSDVCGPMSTTARGGFQYFITFTDDFSRYGYVYLMRHKSETFEKFKEFQNEVENQCGKKIKALRSDRGGEYLSHEFSNHLKSCRIVPQLTPPGTPQRNGVSERRNRTLLDMVRSMMSQSDLPLSFWGYALETAAFTLN;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Sitalica164_1034	dante	protein_domain	5188	5945	1389	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Angela;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Angela;Best_Hit=Ty1-RT__REXdb_ID1933|Class_I|LTR|Ty1/copia|Angela:5188-5945[100percent];Best_Hit_DB_Pos=1:253of253;DB_Seq=WQSAMQSETESMGDNxVWNLVDPP-IECKWIYKKKKDMDGNVHIYKARLVAKGFQQVQGVDYDETFSPVVMLKSIRIILAIVAYFDYEIWQMDVKIAFLNGNLAEDVYMIQPEGFVDPKNAGKVCKFQRSIYGLKQASRSWNIRFDEVVKGFDFTKNEEESCVYKKVSGSSVVFLILYVDDILLIGNNIPMLESVKTSLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQDTYIDKVLKRFSMEEAKKGFLP;Query_Seq=WQSAMQSETESMGDN*VWNLVDPP/IECKWIYKKKKDMDGNVHIYKARLVAKGFQQVQGVDYDETFSPVVMLKSIRIILAIVAYFDYEIWQMDVKIAFLNGNLAEDVYMIQPEGFVDPKNAGKVCKFQRSIYGLKQASRSWNIRFDEVVKGFDFTKNEEESCVYKKVSGSSVVFLILYVDDILLIGNNIPMLESVKTSLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQDTYIDKVLKRFSMEEAKKGFLP;Identity=0.99;Similarity=0.99;Relat_Length=1.0;Relat_Interruptions=0.67;Hit_to_DB_Length=1.0
-Sitalica164_1034	dante	protein_domain	6233	6619	727	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Angela;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Angela;Best_Hit=Ty1-RH__REXdb_ID1933|Class_I|LTR|Ty1/copia|Angela:6233-6619[100percent];Best_Hit_DB_Pos=1:129of129;DB_Seq=DASFQTDRDDLKSQSGFVFMLNGGAVSWKSSKQETVANSTTEVEYIAALEAAKEGVWIRNFLIGLGVFPNVSSPLNLYCDNNGAIAQAKEPRNHQKNKHVMRRFHLIRDFVNRGEIKICKIHTDLNISD;Query_Seq=DASFQTDRDDLKSQSGFVFMLNGGAVSWKSSKQETVANSTTEVEYIAALEAAKEGVWIRNFLIGLGVFPNVSSPLNLYCDNNGAIAQAKEPRNHQKNKHVMRRFHLIRDFVNRGEIKICKIHTDLNISD;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Spurpurea289_256_rc	dante	protein_domain	1045	1345	527	+	.	Name=GAG;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=GAG|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-GAG__REXdb_ID1014|Class_I|LTR|Ty1/copia|Ale:1045-1345[100percent];Best_Hit_DB_Pos=1:101of101;DB_Seq=LLGTIEPHLIANLRCFTMAQAMWAY-LRRIYHQDHSAQK-FQLExEINSYSQGNLTIEQFYSSFINIWSEYSAIVHAKVPTAALAALQAVHAESQRDQFFMKL;Query_Seq=LLGTIEPHLIANLRCFTMAQAMWAY/LRRIYHQDHSAQK/IQLE*EINSYSQGNLTIEQFYSSFINIWSEYSAIVHAKVPTAALAALQAVHAESQRDQFFMKL;Identity=0.96;Similarity=0.96;Relat_Length=1.0;Relat_Interruptions=1.5;Hit_to_DB_Length=1.02
-Spurpurea289_256_rc	dante	protein_domain	1817	2011	353	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-PROT__REXdb_ID1014|Class_I|LTR|Ty1/copia|Ale:1817-2011[100percent];Best_Hit_DB_Pos=1:65of65;DB_Seq=LLVDSGASNHMIDNTTDLHDVHEYDGTQSIQIVNGSTHPITAVGNLDSSIKDVFVSPKLSTSLIS;Query_Seq=LLVDSGASNHMIDNTTDLHDVHEYDGTQSIQIVNGSTHPITAVGNLDSSIKDVFVSPKLSTSLIS;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Spurpurea289_256_rc	dante	protein_domain	2201	2790	1070	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-INT__REXdb_ID1014|Class_I|LTR|Ty1/copia|Ale:2201-2790[100percent];Best_Hit_DB_Pos=1:196of196;DB_Seq=HKKLGHPNSVVLTHLLKHGFLGNNNS-SSFDYAICRLGKSKTLPFPVHGNRASTLFEIVHYDVWGASPVISHGQYRYFVIFINDYSRFTWIYFLHSKAGMFSVFQKFVVLVETQFSTCIKILCSDS-GGxYMSNSFQNYLQQKGIISQRSCPYTPKQNGVAERKNRYLLDVVRALLIDSSVPTKFWVEALSTAVYLIN;Query_Seq=HKKLGHPNSVVLTHLLKHGFLGNNNS\SSFDYAICRLGKSKTLPFPVHGNRASTLFEIVHYDVWGASPVISHGQYRYFVIFINDYSRFTWIYFLHSKAGMFSVFQKFVVLVETQFSTCIKILCSDS\GG*YMSNSFQNYLQQKGIISQRSCPYTPKQNGVAERKNRYLLDVVRALLIDSSVPTKFWVEALSTAVYLIN;Identity=0.98;Similarity=0.98;Relat_Length=1.0;Relat_Interruptions=1.5;Hit_to_DB_Length=1.01
-Spurpurea289_256_rc	dante	protein_domain	3343	4106	1381	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-RT__REXdb_ID1014|Class_I|LTR|Ty1/copia|Ale:3343-4106[100percent];Best_Hit_DB_Pos=1:255of255;DB_Seq=WQQAMQEEIQALQDNQTWDLMTCP-PGVKLIGCKWVYSVKFRSDGSLDQYKARLVALGNRQEYGIDYEETFALVAKMTIVRTILALATSQEWSLRQMDVKNTFLHGDFKEEIYMSPPSSMFKTPSSEVCQLRRSLYGLKQAPRVWFDKFRSTLLDFHFIQSQFDSSLFLHKTSAGIVLLLVYVDDIVITRSNTELLKHSQKHLQDSFHMKDLGTLxYFLGLEVxITPTVTLLHQHKYMEEVISLASFQMGNSVLTP;Query_Seq=WQQAMQEEIQALQDNQTWDLMTCP/TGVKLIGCKWVYSVKFRSDGSLDQYKARLVALGNRQEYGIDYEETFALVAKMTIVRTILALATSQEWSLRQMDVKNTFLHGDFKEEIYMSPPSSMFKTPSSEVCQLRRSLYGLKQAPRVWFDKFRSTLLDFHFIQSQFDSSLFLHKTSAGIVLLLVYVDDIVITRSNTELLKHSQKHLQDSFHMKDLGTL*YFLGLEV*ITPTVTLLHQHKYMEEVISLASFQMGNSVLTP;Identity=0.98;Similarity=0.98;Relat_Length=1.0;Relat_Interruptions=1.0;Hit_to_DB_Length=1.0
-Spurpurea289_256_rc	dante	protein_domain	4373	4754	723	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-RH__REXdb_ID1014|Class_I|LTR|Ty1/copia|Ale:4373-4754[100percent];Best_Hit_DB_Pos=1:127of127;DB_Seq=DADWAGCADTCRYVTGWCMFF-SNTLISWKSKKQDRVSKSSTESEYRAMSSAYSEITWLRGLLGELGFPQLQSTPLHADNTNAIQIAANPVFHERTKHNEVDCHSIRESFHxHEITLPHISTEHQTAD;Query_Seq=DADWAGCADTCRYVTGWCMFF\SNTLISWKSKKQDRVSKSSTESEYRAMSSAYSEITWLRGLLGELGFPQLQSTPLHADNTNAIQIAANPVFHERTKHNEVDCHSIRESFH*HEITLPHISTEHQTAD;Identity=0.98;Similarity=0.98;Relat_Length=1.0;Relat_Interruptions=1.0;Hit_to_DB_Length=1.01
-Stuberosum206_200_rc	dante	protein_domain	635	935	264	+	.	Name=GAG;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=GAG|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-GAG__REXdb_ID1200|Class_I|LTR|Ty1/copia|Ale:635-935[100percent];Best_Hit_DB_Pos=1:102of102;DB_Seq=IMNAVRPGLLSSVVYASDAR-KVWLDLRERFDTVNGSRIFQLHREIHSLTQGTMSIADYHSKLRDLWDEYDAIMPCPSCPCPESKNFGEHCDYQRLLQFLMGL;Query_Seq=LMSAVSEDLLSGIVYATSAY\RE--DLKERFDKVNRMRIYQLHREINTLSQGTDSVSTY*TKLKNLWGEFDAFVPSPSCACPKSKEYANHLYQLRLIQFLSGL;Identity=0.53;Similarity=0.71;Relat_Length=1.0;Relat_Interruptions=1.0;Hit_to_DB_Length=1.01
-Stuberosum206_200_rc	dante	protein_domain	1548	1760	189	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-PROT__REXdb_ID1200|Class_I|LTR|Ty1/copia|Ale:1548-1760[100percent];Best_Hit_DB_Pos=1:71of71;DB_Seq=WIIDTGASHHITSDLGLLDKAREVHAxRDSKVHLPNGKVAAVSHIGSTCVLANQSISNVLFLPDFKFNLLS;Query_Seq=WIIDSGASHHITADKHLLANSRCTTDPHHDKVNLPTGDKATISHIGEIFLFDNETVKDVLCVPDFKFNLLS;Identity=0.52;Similarity=0.66;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Stuberosum206_200_rc	dante	protein_domain	1977	2580	538	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-INT__REXdb_ID1202|Class_I|LTR|Ty1/copia|Ale:1977-2559[96percent];Best_Hit_DB_Pos=1:194of194;DB_Seq=HKRLGHAPIDVIKRHESLSYLSNKDQS---HCTVCPISKQTKLPFALSTHKSKAV-FELLHCDLWGPYRVPTHNGKRFFVTIVDDYSRYTWIFLVTSKVDTIVVIKHFLLQVQNVFSTTVKTFRTDNGCEFFSKDFQNLMCEMGIIHQSTCVYTPQQNGIAERKHRTILAVARSLRFQASIPLRYWGECVTTAVYILN;Query_Seq=HRRLGHPSSHILKCLDLLH--SNKDVELLNSCLVCPLAKQTRLSFPISNSKT-SV\FELVHMDLWGPYKIPTFDKKHYFLTIVDDYSRYTWIHLLQLKSETIVAIKNFLLMIKNQFGHTIKTVRSDNGTEFFNSQCKELFLNLGISDQSNCPHIPQQNGVVERKHRHILNVARAIRFQACMPLRYWGLCVKATVYLIN;Identity=0.54;Similarity=0.7;Relat_Length=1.0;Relat_Interruptions=0.5;Hit_to_DB_Length=1.02
-Stuberosum206_200_rc	dante	protein_domain	3252	3996	798	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-RT__REXdb_ID1202|Class_I|LTR|Ty1/copia|Ale:3252-3996[100percent];Best_Hit_DB_Pos=1:256of256;DB_Seq=WVKAMELEIAALESNKTWSIVDLPPGKKPIGCKWIYKIKFLA-SGEVERFKARLVAKGFSQQEGLDYGETFSRVAKMVTVRSVVALAASRGWFIYQMDVHNAFLNGDLHEEVYMVIPNGFARQGECQKVCKLHKSLYGLKQAPRQWNMKLTEALVQMGFKQSHYDYSLFTKQAGDAVVVILVYVDDLLITGSSHELLCRTRQDIQKRFKMKDLGELKFFLGIEFSRSSKGILMTQRKYALELVSETGLGGAKPVHTP;Query_Seq=WIDAMKLEIKALEDNKTWMVVDLRKDKHAVGSKWI-------\NGEVERFKARLVAKGYSQHEGIHYHDTFSPVAKMVTVRCVIALAVSKGWSLYQMDVYNAFLQGDVDEEVYIEMPEGFRTQGTT-KVCKLIKSLYGLKQASRQWNIKLTNTLLSAGFIQSSHDYSLFTLKKPEGMVIILIYVDDLLITGDNEALIKEVNETLHKQFKLKDLGELKYFLGIEVLRSKNGIILNQRKYMLELISNTGLSGAKTTATP;Identity=0.61;Similarity=0.74;Relat_Length=1.0;Relat_Interruptions=0.33;Hit_to_DB_Length=1.0
-Stuberosum206_200_rc	dante	protein_domain	4084	4200	82	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-RH__REXdb_ID3204|Class_I|LTR|Ty1/copia|Ivana:4084-4200[100percent];Best_Hit_DB_Pos=12:50of134;DB_Seq=YRSLIGCLMYLTATRPDIMHAVSLLSKKQEIIAQSTAEA;Query_Seq=YQRLVGKLMYATITRPDISYAVQTLSQFMQHPKRSHWEA;Identity=0.49;Similarity=0.64;Relat_Length=0.291;Relat_Interruptions=0.0;Hit_to_DB_Length=0.29
-Stuberosum206_200_rc	dante	protein_domain	4291	4653	479	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-RH__REXdb_ID1202|Class_I|LTR|Ty1/copia|Ale:4291-4638[95percent];Best_Hit_DB_Pos=1:116of127;DB_Seq=DSDWGACLETRKSVTGYLVKFGGGLISWKSKKQGTVSRSSAEAEFRSMAACAAEVTWLIGLYKELGVSLTLPIKMVCDSKAAIQIAANPIFHERTKHIDIDCHFVRERICQGILQT;Query_Seq=DSDWAACPKTRRSVTGYIVKFGESIVSWKSKKQQTISRSSAEAEYRSMTSAVAEVTWLIGLFKELNVSIQMPITVLSDSKSAIQLAANPVFHERTKHIEIDCHFIRDKVKAGVIQT;Identity=0.68;Similarity=0.88;Relat_Length=0.913;Relat_Interruptions=0.0;Hit_to_DB_Length=0.91
-Vvinifera145_640	dante	protein_domain	1451	1663	387	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-PROT__REXdb_ID2615|Class_I|LTR|Ty1/copia|Bianca:1451-1663[100percent];Best_Hit_DB_Pos=1:71of71;DB_Seq=CLADCATTHTILQDKRYFLELTLIKANVSNIYGTTNLVEGSGRANITLSNGTRFHINDALYSSKSRRNLLS;Query_Seq=CLADCATTHTILQDKRYFLELTLIKANVSNIYGTTNLVEGSGRANITLSNGTRFHINDALYSSKSRRNLLS;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Vvinifera145_640	dante	protein_domain	1880	2488	1166	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-INT__REXdb_ID2615|Class_I|LTR|Ty1/copia|Bianca:1880-2488[100percent];Best_Hit_DB_Pos=1:203of203;DB_Seq=HDRLGHPGSSMMRRIIEHSHGHPLKNQKILSPNEYSCAACLQGKLIIRPSFTKVISESPIFLERIHGDICGPIHPPCGPFRYFMILIDASTRWSHVCLLSTRNVAFARLLAQIIRLRAQFPDYPIKTIRLDNVGEFTSQTFIDYCMLVxINIEHPVAHTHTQNGLAESFIKRLQLIARPLLMKTKLPTSAWGHAIMHTAVLVR;Query_Seq=HDRLGHPGSSMMRRIIEHSHGHPLKNQKILSPNEYSCAACLQGKLIIRPSFTKVISESPIFLERIHGDICGPIHPPCGPFRYFMILIDASTRWSHVCLLSTRNVAFARLLAQIIRLRAQFPDYPIKTIRLDNVGEFTSQTFIDYCMLV*INIEHPVAHTHTQNGLAESFIKRLQLIARPLLMKTKLPTSAWGHAIMHTAVLVR;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.33;Hit_to_DB_Length=1.0
-Vvinifera145_640	dante	protein_domain	3419	4212	1416	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-RT__REXdb_ID2615|Class_I|LTR|Ty1/copia|Bianca:3428-4212[98percent];Best_Hit_DB_Pos=1:262of262;DB_Seq=WKEAIHAELNSLTKREVFGPVVQTPEDVKPVGCKWVFVRKRNENNEIIRYKAQLVAQGFSxRPGIDYEETYSPVMDAITFRFLISLAVSERLDIRLMDVITTYLYGSMDNDIYM-MKIPExFKLPEANNTKPRSMYSIKLQRSxYGLKxSGRMWYNRLSEYLLKEGYVNNPICPCIFIKSEMGFAIIIVYVDDLNLVGTLEELTRTTNYLKKEFETKDLGKTKSCLGLQIEHFPNGVLVHQSTFIKKVLKCFYMDKAHHLSSP;Query_Seq=WKEAIHAELNSLTKREVFGPVVQTPEDVKPVGCKWVFVRKRNENNEIIRYKAQLVAQGFS*RPGIDYEETYSPVMDAITFRFLISLAVSERLDIRLMDVITTYLYGSMDNDIYI/MKIPE*FKLPEANNTKPRSMYSIKLQRS*YGLK*SGRMWYNRLSEYLLKEGYVNNPICPCIFIKSEMGFAIIIVYVDDLNLVGTLEELTRTTNYLKKEFETKDLGKTKSCLGLQIEHFPNGVLVHQSTFIKKVLKCFYMDKAHHLSSP;Identity=0.98;Similarity=0.98;Relat_Length=1.0;Relat_Interruptions=1.67;Hit_to_DB_Length=1.0
-Vvinifera145_640	dante	protein_domain	4507	4908	760	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-RH__REXdb_ID2615|Class_I|LTR|Ty1/copia|Bianca:4507-4908[100percent];Best_Hit_DB_Pos=1:134of134;DB_Seq=DAGYFSDPHKGRSxIRYVFNCNGTAISWRSVKQTMVVTSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSSIKGDPTILFEDNVACIAQIAEGYIKGDRTKHISPKFFYTHELQKSGEIDVQQIRSSDNLAD;Query_Seq=DAGYFSDPHKGRS*IRYVFNCNGTAISWRSVKQTMVVTSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSSIKGDPTILFEDNVACIAQIAEGYIKGDRTKHISPKFFYTHELQKSGEIDVQQIRSSDNLAD;Identity=0.99;Similarity=0.99;Relat_Length=1.0;Relat_Interruptions=0.5;Hit_to_DB_Length=1.0
-Fexcel_5	dante	protein_domain	527	859	447	+	.	Name=GAG;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=GAG|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-GAG__REXdb_ID3008|Class_I|LTR|Ty1/copia|Ivana:581-859[83percent];Best_Hit_DB_Pos=1:93of93;DB_Seq=LFQSIDKSILKTIAQKETPKQLWDSMKVKYQGNARVQRAQLQILRRNFEVLEMKLGESVTNYFARVMLVANDMRNLGENMPDVKIVEKILRTL;Query_Seq=LFHSIDKSILKTITQKETSRQLWESMRIKYQGNARVQRAQLQTLRRDFEVLEMKLGESMTNYFARVMLVANDMRNCGEDMPDVKIVEKILRTL;Identity=0.87;Similarity=0.96;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Fexcel_5	dante	protein_domain	1241	1453	312	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-PROT__REXdb_ID3199|Class_I|LTR|Ty1/copia|Ivana:1241-1453[100percent];Best_Hit_DB_Pos=1:71of71;DB_Seq=WFLDSGCSNHMTGDKQWFVHLDETFRHTVKLGNNTKMTVMGKGSIKLRVNGINQVITEVYYLPELKNNLLS;Query_Seq=WFLDSGCSNHMTGNKQWFTELDEGYRHSVKLGNNMKMAVMGKGSIKLQVGEVKQVVSDVYYIPDLKNNLLS;Identity=0.75;Similarity=0.89;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Fexcel_5	dante	protein_domain	1646	2281	875	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-INT__REXdb_ID3824|Class_I|LTR|Ty1/copia|Ivana:1646-2245[94percent];Best_Hit_DB_Pos=1:200of200;DB_Seq=HCRYGHLSFKGLRTLQYKKMVRGLPQLKASSKVCTDCMVGKQHRDAIPKRSLWRASQRLQLVHADICEPIKPVSNSKKRYLISFIDDYSRKVWIYFLTEKSEAFTTFKNYKNLVEKETGAFICCLRTDRGGEFTSLEFNAFCKTNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLSEKQVPKNFWPEAVNWTAHVLN;Query_Seq=HQRFGHLSHKGLLTLQCKKLVKGLPQFKSTSRVCTICMIGKQHRDTIPKKSKWRASERLQLIHADICGPVTPTSNSGKRYMLSFIDDYSRKIWVYFLVEKSETFAWFKVFKSLVEKELGLYICCLRTDRGGEFTSKEFNEFCTVHGIKRQLTTAYTPQQNGVAERKNRTIMNMVRCLLTEKKIPKAFWPEAVKWTAHILN;Identity=0.74;Similarity=0.85;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Fexcel_5	dante	protein_domain	2849	3641	1121	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-RT__REXdb_ID3636|Class_I|LTR|Ty1/copia|Ivana:2864-3633[97percent];Best_Hit_DB_Pos=1:257of257;DB_Seq=WKAAMDLEIDAIVKNRTWDLVDLPMGAKKIGVKWVYKTKLNENGEVDKYKARLVAKGYAQEHGIDYNEVFAPVARWDTIRMV-LAVAAQKGWMVFQLDVKSAFLHGDLKEAVFVEQPQGYEQEGSKEKVYKLKKALYGLKQAPRAWYSKIENYFLKEGFERCNHESTLFVKTNAGGKVLIISLYVDDLIFTGNDACLIEKFKCSMKSEFEMTDLGKMRYFLGVEVLQSAKGIHLCQKKYANDVLNRFGMKECNPVKNP;Query_Seq=WRSAMDLEIESIIKNKTWELVDLPVGAKRIGVKWVYKTKLNEKGEFDKCKARLVAKGYAQEYGIDYNEVFAPVARWDTIRMG/LALAAQKGWTVFQLDVKSAFLHGELREAVYVDQPLGYIKEGEENKVYKLKKALYGLKQAPRAWYSRIEGYFVKAGFEKCSYEHTLFIKVEGEGKILIVSLYVDDLIFTGNDVCMIENFKSSMMHEFEMTDLGKMKYFLGVEIKQSVEGIHLCQSKYAREVLDRFGMANSNPVRNP;Identity=0.76;Similarity=0.88;Relat_Length=1.0;Relat_Interruptions=0.33;Hit_to_DB_Length=1.0
-Fexcel_5	dante	protein_domain	3661	3774	114	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-RH__REXdb_ID3204|Class_I|LTR|Ty1/copia|Ivana:3661-3774[100percent];Best_Hit_DB_Pos=1:38of134;DB_Seq=DDGADKVDEAIYRSLIGCLMYLTATRPDIMHAVSLLSK;Query_Seq=EDGGAEVDGTLYKQLVGSLMYLNATRPDLMYVVCLISR;Identity=0.53;Similarity=0.76;Relat_Length=0.284;Relat_Interruptions=0.0;Hit_to_DB_Length=0.28
-Fexcel_5	dante	protein_domain	3901	4281	568	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-RH__REXdb_ID3539|Class_I|LTR|Ty1/copia|Ivana:3901-4281[100percent];Best_Hit_DB_Pos=1:127of127;DB_Seq=DSDYAGDTEDRRSTSGYVFLLSGGAVAWSSRKQPVVTLSTTEAEYVAAAACACHSIWMKRVLNSLGFSSCKCVKIFCDNSSTIKLSKNPVLHGRTKHIDIKFHFLRDLVKEGVVELVHCGTSEQMAD;Query_Seq=DSDYAGDSDDSRSTSGFAFMLSGGAVSWSSRKQSVVTLSTTEAEYVAAAACACQSIWMQRVFNKLSHTQCKCVTIFCDNSSTIKLSKNPVFHGRSKHINVRFHFLRDLTKDGIVKLEFCGSSEQLAD;Identity=0.76;Similarity=0.9;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Pabies_54	dante	protein_domain	1207	1476	481	+	.	Name=GAG;Final_Classification=Class_I|LTR|Ty1/copia|Gymco-II;Region_Hits_Classifications=GAG|Class_I|LTR|Ty1/copia|Gymco-II;Best_Hit=Ty1-GAG__REXdb_ID2667|Class_I|LTR|Ty1/copia|Gymco-II:1207-1476[100percent];Best_Hit_DB_Pos=1:90of90;DB_Seq=IADSINDHLIPCVSSKNTLKEMFDSLSKLYEGKNINRKMNLRSQLKNTKMQKGETIQEYFSRISEIKKQxKAIGDSIDEDEFVMTALNGL;Query_Seq=IADSINDHLIPCVSSKNTLKEMFDSLSKLYEGKNINRKMNLRSQLKNTKMQKGETIQEYFSRISEIKKQ*KAIGDSIDEDEFVMTALNGL;Identity=0.99;Similarity=0.99;Relat_Length=1.0;Relat_Interruptions=1.0;Hit_to_DB_Length=1.0
-Pabies_54	dante	protein_domain	1966	2183	374	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Gymco-II;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Gymco-II;Best_Hit=Ty1-PROT__REXdb_ID2667|Class_I|LTR|Ty1/copia|Gymco-II:1966-2183[100percent];Best_Hit_DB_Pos=1:73of73;DB_Seq=WLIDSGASKHMTRx-ESTLSCISENKFSQKVTLGDDYQYPIKGVGESNYKLDSENSIKMKDVLYVPGLKKNLLS;Query_Seq=WLIDSGASKHMTGK/ESTLSCISENKFSQKVTLGDDYQYPIKGVGESNYKLDSENSIKMKDVLYVPGLKKNLLS;Identity=0.96;Similarity=0.96;Relat_Length=1.0;Relat_Interruptions=1.0;Hit_to_DB_Length=1.01
-Pabies_54	dante	protein_domain	2370	3035	1130	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Gymco-II;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Gymco-II;Best_Hit=Ty1-INT__REXdb_ID2667|Class_I|LTR|Ty1/copia|Gymco-II:2370-2963[89percent];Best_Hit_DB_Pos=1:198of198;DB_Seq=HRRLAHINYKALPYICKVVTGLPELKVDQEGICNGCAQGKNIKNPFPKRDSKAEGVLELIHSDVCGPMPSSSISGYVYYVSFIDDYSRKTWIYFLKSKDEVFSKFKEFKALIENLSERKIKILRSDNGGAYTSKEFVNFCRDVGINKELTTPYNPQQNGVAERKNRTIMEVVKTMIHDQDLPMCLWAEAAMAVVYVQN;Query_Seq=HRRLAHINYKALPYICKVVTGLPELKVDQEGICNGCAQGKNIKNPFPKRDSKAEGVLELIHSDVCGPMPSSSISGYVYYVSFIDDYSRKTWIYFLKSKDEVFSKFKEFKALIENLSERKIKILRSDNGGAYTSKEFVNFCRDVGINKELTTPYNPQQNGVAERKNRTIMEVVKTMIHDQDLPMCLWAEAAMAVVYVQN;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Pabies_54	dante	protein_domain	3600	4315	1347	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Gymco-II;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Gymco-II;Best_Hit=Ty1-RT__REXdb_ID2667|Class_I|LTR|Ty1/copia|Gymco-II:3600-4315[100percent];Best_Hit_DB_Pos=1:239of239;DB_Seq=WADAMTEEYQSIIKNDVWQIVPKPKSKDMVSSKWLFKIKHAADGSIEKYKARFVPRGFSQKEGIDYEETFAPVARYTSIRTIIALAAKMKWKLHQMYVKTTFLNGVIEEEVYIEQPQGFEVEDRKSHVCRLKKALYRLKQAPRAWYGRIDSFLTSLGFTKSKVDSNLYFKIMNDEPVILLLYVDDLFLTREEKIITEC-HYFLGLEVWQSPERIFLNQGKYTVEILKRFDMLECKPMNTP;Query_Seq=WADAMTEEYQSIIKNDVWQIVPKPKSKDMVSSKWLFKIKHAADGSIEKYKARFVPRGFSQKEGIDYEETFAPVARYTSIRTIIALAAKMKWKLHQMYVKTTFLNGVIEEEVYIEQPQGFEVEDRKSHVCRLKKALYRLKQAPRAWYGRIDSFLTSLGFTKSKVDSNLYFKIMNDEPVILLLYVDDLFLTREEKIITEC/HYFLGLEVWQSPERIFLNQGKYTVEILKRFDMLECKPMNTP;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.33;Hit_to_DB_Length=1.0
-Pabies_54	dante	protein_domain	4343	4456	102	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-RH__REXdb_ID3204|Class_I|LTR|Ty1/copia|Ivana:4343-4456[100percent];Best_Hit_DB_Pos=1:38of134;DB_Seq=DDGADKVDEAIYRSLIGCLMYLTATRPDIMHAVSLLSK;Query_Seq=DTSSDLIDATLYRQIIGLLMYLTNTRPNICFAVNTLSQ;Identity=0.53;Similarity=0.68;Relat_Length=0.284;Relat_Interruptions=0.0;Hit_to_DB_Length=0.28
-Pabies_54	dante	protein_domain	4583	4966	675	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Gymco-II;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Gymco-II;Best_Hit=Ty1-RH__REXdb_ID2667|Class_I|LTR|Ty1/copia|Gymco-II:4583-4966[100percent];Best_Hit_DB_Pos=1:128of128;DB_Seq=DSDWAGSVADRKSTSGCCFSLGSAMISWQSRKQSSVALSIAEAEYIVACSASCEAIWLRKLLIGLF-DLEMEATTILCDNQSCIKM-XXXNPVFHDRSKHIEIRYHYIRDMVQRGALKLQYISTDEQVAD;Query_Seq=DSDWAGSVADRKSTSGCCFSLGSAMISWQSRKQSSVALSIAEAEYIVACSASCEAIWLRKLLIGLL/DLEMEATTILCDNQSCIKM\XXXNPVFHDRSKHIEIRYHYIRDMVQRGALKLQYISTDEQVAD;Identity=0.95;Similarity=0.95;Relat_Length=1.0;Relat_Interruptions=1.0;Hit_to_DB_Length=1.02
-Wicker_Bianca_AF521177-1	dante	protein_domain	683	830	86	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand;Region_Hits_Classifications=RH|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand;Best_Hit=Ty3-RH__REXdb_ID8306|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand:683-830[100percent];Best_Hit_DB_Pos=57:105of253;DB_Seq=SAHPHPVSTRPG-REQGGEAPEPNGGLRPPTAGAGPPPACPTVPGAPDPQ;Query_Seq=SHHPHLEHPDQG\EEEGMEAMGSSSSLRPPSPAIPPPPPAPPLPLTPPPE;Identity=0.4;Similarity=0.48;Relat_Length=0.194;Relat_Interruptions=1.0;Hit_to_DB_Length=0.2
-Wicker_Bianca_AF521177-1	dante	protein_domain	2214	2483	350	+	.	Name=GAG;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=GAG|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-GAG__REXdb_ID2562|Class_I|LTR|Ty1/copia|Bianca:2214-2483[100percent];Best_Hit_DB_Pos=1:90of90;DB_Seq=LRHHLHPDLKSEYMTEKDPLVLWQSLKDRFDQQGSIVLPQAQHDWITLRFQDYKSVAAYNSALHRIISQLRLCGQKITDAEMIEKTLSTF;Query_Seq=LRHHLHSDLKSEYLMEEDPLVLWNSLKERYDQQRAVMLPEAQREWSLIRFQDFKSVAAYNSAVHKVNSKLRFCNQEISEEDLIEKTLCTF;Identity=0.64;Similarity=0.87;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Wicker_Bianca_AF521177-1	dante	protein_domain	3336	3548	307	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-PROT__REXdb_ID2563|Class_I|LTR|Ty1/copia|Bianca:3336-3548[100percent];Best_Hit_DB_Pos=1:71of71;DB_Seq=CLVDSCTTNSILRETKYFQTLTKRTGNVLTIAGRDATIVGSGRATITLPMGTQVTIEDALLYPDSTRTLLS;Query_Seq=CLVDSCTSNTILREIKYFQTLTKRKGNIMTIDSRDASIIGSGRATLVLPMGSTIAIEDALLYPQSTRTLLS;Identity=0.76;Similarity=0.89;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Wicker_Bianca_AF521177-1	dante	protein_domain	3762	4370	921	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-INT__REXdb_ID2589|Class_I|LTR|Ty1/copia|Bianca:3762-4370[100percent];Best_Hit_DB_Pos=1:203of203;DB_Seq=HDRLGHPGIGMMRKIISNSNGHELNTAKFPKSSDFMCTSCATGKLILRPSPVKIQNEPLKFLERIQGDICGPIQPTSGPFRYFMVLIDASTRWSHVCLLSTRNHAFAKIIAQLIKLRAHNPEHQIQSIRMDNAAEFSSKAFNDYCMALGIQVQHSVPYVHTQNGLAESLIKRIKLIARPLIQNCNLPTSCWGHAVLHAADLIQ;Query_Seq=HDRLGHPGVGMMTKIIDNSIGHSLPTINFSKLSDFVCTACATGKLIIKPSYLKVKNESLNFLERIQGDICGPIQALSGPFRYFMVLIYASTRWSHVCLLSTRNHAFSQLIDQIIKLRANHPKNRIKTIRMDNAAEFSSRAFNDYCMAMGIHLEHFVPYVHTQNGLAESLIKRVKLVARPLLQNCNLPASCWAHAVLHAADLIQ;Identity=0.77;Similarity=0.89;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Wicker_Bianca_AF521177-1	dante	protein_domain	5271	6058	1172	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-RT__REXdb_ID2589|Class_I|LTR|Ty1/copia|Bianca:5280-6058[98percent];Best_Hit_DB_Pos=1:260of260;DB_Seq=WKEAIKAEIASLTKRGVFTKAIPTPSKVFPVGFKWVFVRKRNENNEVVRYKARLVAQGFTQRPGIDYNETYSPVMSGITFRYLISLAVQNHLSMQLMDVVTAYLYGSLDSDIYMKVPDGIQIPNPNANRNMYCVKLQKSLYGLKQSGRMWYNRLSEFLLNKGYTNNDDCPCVFIKKSQTGFCIISVYVDDLNIIGSPKDIEEARKHL-KTEFEMKDLGKTKYCLGLQIEHRPLGILVHQSAYIQKILEKFNMDKSYPNKTP;Query_Seq=WKEAIEAEVRSLNKREVFSSVIPTPHNVFPVGAKWVFVRKRNENNEVVRYKARLVAQGFTQRPDIDYDDTYSPVMSGITFRYLISLAVQMNLSMQLMDVVTTYLYGSLKSDIYMKVPE*LKMSNPKENRNAYCVKLQKSLYGLKQSGRMWYNRLSEFLIQKGYSNNDDCPCVLIKKSSNGFCIISVYVDDLNIMGSTPDIEEAHNHL/NGEFEMKDLGKTKFCLGLQLEHLPSGILVYQPAYIQKVLENFNMDKSYPTKTP;Identity=0.81;Similarity=0.87;Relat_Length=1.0;Relat_Interruptions=0.67;Hit_to_DB_Length=1.0
-Wicker_Bianca_AF521177-1	dante	protein_domain	6353	6767	384	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-RH__REXdb_ID2595|Class_I|LTR|Ty1/copia|Bianca:6353-6767[100percent];Best_Hit_DB_Pos=1:133of133;DB_Seq=DAGYLSDPHNARSQSGFVFLHGGTAISWKSSKQTLVATSTNHS-EIISLFEASRECVWLRRMINHIQKSCGIGSIESPTIIYEDNAACVAQMQTRYIKTNI---TKHISPKWFFPHVLQKKGEINIL--QIKSCENLAD;Query_Seq=DXCYLSDPHNVRSQTGFVFLYGGTAFSWKSTKQTLLATSTNHS\ELVAFFEAS*DCVWLRRMINPIQTSCGVGSLGSPTIIYEDNAASPLSQNANVVYVRK*YPHTYILPKVILILSALQKGWRNLIFSQIKSCANLAD;Identity=0.59;Similarity=0.7;Relat_Length=1.0;Relat_Interruptions=1.5;Hit_to_DB_Length=1.05
--- a/tmp/multifasta_win.gff3	Wed Jul 03 08:10:33 2019 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,58 +0,0 @@
-##gff-version 3
-##-----------------------------------------------
-##PIPELINE VERSION         : dante-rv-3081(adb2509)
-##PROTEIN DATABASE VERSION : Viridiplantae_v3.0_pdb
-##-----------------------------------------------
-Acoerulea195_58_rc	dante	protein_domain	1753	1956	368	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|SIRE;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|SIRE;Best_Hit=Ty1-PROT__REXdb_ID3879|Class_I|LTR|Ty1/copia|SIRE:1753-1956[100percent];Best_Hit_DB_Pos=1:68of68;DB_Seq=WLLDSGASKHMSGNAKLFSSVTAIDGGSVTFGNGKSSPVIGKGFVAGIGLSPNDVCLLVDGLRVNLIS;Query_Seq=WLLDSGASKHMSGNAKLFSSVTAIDGGSVTFGNGKSSPVIGKGFVAGIGLSPNDVCLLVDGLRVNLIS;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Acoerulea195_58_rc	dante	protein_domain	2140	2742	1162	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|SIRE;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|SIRE;Best_Hit=Ty1-INT__REXdb_ID3979|Class_I|LTR|Ty1/copia|SIRE:2140-2742[100percent];Best_Hit_DB_Pos=1:201of201;DB_Seq=HQRLGHVNFEHLDNLTRNEYIKGVPRLGRNRDTVCGGCQLGKQIRSPHSKKKSITTSSPLELIHMDLMGPTRTPSLGGKRYILVMVDDYTRFTWVSFLREKSDAFLEFQGICLRIQNEKDTQIKHIRSDRGGEFTATGVIEYCIANGTWQEFSAPYTPQQNGVAERKNRVIQEMARAMLHAKDVPTKFWAEVVHTACYIMN;Query_Seq=HQRLGHVNFEHLDNLTRNEYIKGVPRLGRNRDTVCGGCQLGKQIRSPHSKKKSITTSSPLELIHMDLMGPTRTPSLGGKRYILVMVDDYTRFTWVSFLREKSDAFLEFQGICLRIQNEKDTQIKHIRSDRGGEFTATGVIEYCIANGTWQEFSAPYTPQQNGVAERKNRVIQEMARAMLHAKDVPTKFWAEVVHTACYIMN;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Acoerulea195_58_rc	dante	protein_domain	2815	2958	128	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|SIRE;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|SIRE;Best_Hit=Ty1-RT__REXdb_ID4340|Class_I|LTR|Ty1/copia|SIRE:2815-2958[100percent];Best_Hit_DB_Pos=1:48of256;DB_Seq=HFHIFGIPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTR;Query_Seq=YMRVFGSVCYVCKDRQSLSKFDSRGEVALLLGYSSNSRAFRVFNYTTR;Identity=0.46;Similarity=0.65;Relat_Length=0.188;Relat_Interruptions=0.0;Hit_to_DB_Length=0.19
-Acoerulea195_58_rc	dante	protein_domain	3268	4199	1404	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|SIRE;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|SIRE;Best_Hit=Ty1-RT__REXdb_ID3881|Class_I|LTR|Ty1/copia|SIRE:3433-4199[82percent];Best_Hit_DB_Pos=1:256of256;DB_Seq=WLVAMQEELGQFKRSDVWTLVPRPTHTNVVGTKWIFKNKLDEFGQIVRNKARLVAQGYSQIEGIDYGETFAPVARLESVRLLLAMACHLNFKLYQMDVKSAFLNGILNEEVYVEQPKGFVDHT-FPNHVFKLQKALYGLKQAPRAWYERLTSFLLGKGFVRGSVDRTLFILRKNTDVLLAQVYVDDIVFGSTCPSLSESFSQLMSSEFEMSLMGELNFFLGLQVKQFDHGAFISQTKYAKELVKKFGLSTSSGQDTP;Query_Seq=WLVAMQEELGQFKRSDVWTLVPRPTHTNVVGTKWIFKNKLDEFGQIVRNKARLVAQGYSQIEGIDYGETFAPVARLESVRLLLAMACHLNFKLYQMDVKSAFLNGILNEEVYVEQPKGFVDHT/FPNHVFKLQKALYGLKQAPRAWYERLTSFLLGKGFVRGSVDRTLFILRKNTDVLLAQVYVDDIVFGSTCPSLSESFSQLMSSEFEMSLMGELNFFLGLQVKQFDHGAFISQTKYAKELVKKFGLSTSSGQDTP;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.33;Hit_to_DB_Length=1.0
-Acoerulea195_58_rc	dante	protein_domain	4260	4346	90	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-RH__REXdb_ID3204|Class_I|LTR|Ty1/copia|Ivana:4260-4346[100percent];Best_Hit_DB_Pos=12:40of134;DB_Seq=YRSLIGCLMYLTATRPDIMHAVSLLSKKQ;Query_Seq=YRSMIGSLLYLTASRPDISYSVGVCARFQ;Identity=0.55;Similarity=0.83;Relat_Length=0.216;Relat_Interruptions=0.0;Hit_to_DB_Length=0.22
-Acoerulea195_58_rc	dante	protein_domain	4467	4844	733	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|SIRE;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|SIRE;Best_Hit=Ty1-RH__REXdb_ID3879|Class_I|LTR|Ty1/copia|SIRE:4467-4844[100percent];Best_Hit_DB_Pos=1:126of126;DB_Seq=DADWGGNLDDRHSTSGGCFYVGNNLVSWHSKKQSSVSISSCEAEYIAAASACTQLLWMRQMLRDYGIQQQAMDLFCDNTSTISISKNPVQHSRTKHIDIRHHFLREAVEKGDIVMEFIPTEHQLAD;Query_Seq=DADWGGNLDDRHSTSGGCFYVGNNLVSWHSKKQSSVSISSCEAEYIAAASACTQLLWMRQMLRDYGIQQQAMDLFCDNTSTISISKNPVQHSRTKHIDIRHHFLREAVEKGDIVMEFIPTEHQLAD;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Egrandis201_33_rc	dante	protein_domain	1161	1367	391	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-PROT__REXdb_ID324|Class_I|LTR|Ty1/copia|Ale:1161-1367[100percent];Best_Hit_DB_Pos=1:69of69;DB_Seq=WIIDTGASDHIVCNQFFFSNIEKLPFPISIQLPNGNTTHVGMTGTVNLSPLITLNNVLYVPSFQFNLIS;Query_Seq=WIIDTGASDHIVCNQFFFSNIEKLPFPISIQLPNGNTTHVGMTGTVNLSPLITLNNVLYVPSFQFNLIS;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Egrandis201_33_rc	dante	protein_domain	1572	2195	1035	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-INT__REXdb_ID324|Class_I|LTR|Ty1/copia|Ale:1584-2123[86percent];Best_Hit_DB_Pos=1:180of180;DB_Seq=HQRLGHTTSFPYPQCHICPLVKQTCAPFQTSNTRLDSIFSLVHVDVWGPYHTLNHDGSWFFLTIVDDLSRATWVFLIQSKNQVLSHLRIFLSLSKTxFGKSICRIRTDNGKELFSGECASFFSSNGILHESTCTYTPQQNEVVERKHRHLLELAWALKFQASIPENFWGDCVVTAVYLIN;Query_Seq=HQRLGHTTSFPYPQCHICPLVKQTCAPFQTSNTRLDSIFSLVHVDVWGPYHTLNHDGSWFFLTIVDDLSRATWVFLIQSKNQVLSHLRIFLSLSKT*FGKSICRIRTDNGKELFSGECASFFSSNGILHESTCTYTPQQNEVVERKHRHLLELAWALKFQASIPENFWGDCVVTAVYLIN;Identity=0.99;Similarity=0.99;Relat_Length=1.0;Relat_Interruptions=0.5;Hit_to_DB_Length=1.0
-Egrandis201_33_rc	dante	protein_domain	2856	3620	1393	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-RT__REXdb_ID324|Class_I|LTR|Ty1/copia|Ale:2856-3619[99percent];Best_Hit_DB_Pos=1:255of255;DB_Seq=WQRAMEVELKALIDNHIWDIVSLPPHRKPIGCKWVYKIN-HKVDGSVERYKARLVAKGFTxRExFDYHETFSSVAKDVTVCSFLSVAAFRNWSMHQMDIHNAFLHGDLEEEIYMDLPQGLRRQGESKVCRLRKSLYGLKxASRQWYTKFTNALTGAGFKQSKHDYALFTWTKVTSSIYLMIYVDDILIMGNDDSVVRKLKEYLHSSFHIKDLGSPKYFLGIEITRSDQGISLSQRKFVMEIISEAGLSGCKLAVIP;Query_Seq=WQRAMEVELKALIDNHIWDIVSLPPHRKPIGCKWVYKIN/YKVDGSVERYKARLVAKGFT*RE*FDYHETFSSVAKDVTVCSFLSVAAFRNWSMHQMDIHNAFLHGDLEEEIYMDLPQGLRRQGESKVCRLRKSLYGLK*ASRQWYTKFTNALTGAGFKQSKHDYALFTWTKVTSSIYLMIYVDDILIMGNDDSVVRKLKEYLHSSFHIKDLGSPKYFLGIEITRSDQGISLSQRKFVMEIISEAGLSGCKLAVIP;Identity=0.98;Similarity=0.98;Relat_Length=1.0;Relat_Interruptions=1.33;Hit_to_DB_Length=1.0
-Egrandis201_33_rc	dante	protein_domain	3914	4294	717	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-RH__REXdb_ID324|Class_I|LTR|Ty1/copia|Ale:3914-4294[100percent];Best_Hit_DB_Pos=1:127of127;DB_Seq=DLDYATCPMSRRSIIGFCIKFGESLLSWKTKKQSTVSLSSAEAKYRSMAKTVCEVVWLRGLLQDLGIQVRGPTLLFCDNDSAIKLAANPILHERTKHIEVDCHFTREKIKEGIIKTRGIRTTEQPAD;Query_Seq=DLDYATCPMSRRSIIGFCIKFGESLLSWKTKKQSTVSLSSAEAKYRSMAKTVCEVVWLRGLLQDLGIQVRGPTLLFCDNDSAIKLAANPILHERTKHIEVDCHFTREKIKEGIIKTRGIRTTEQPAD;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Gmax275_361_rc	dante	protein_domain	560	829	471	+	.	Name=GAG;Final_Classification=Class_I|LTR|Ty1/copia|Tork;Region_Hits_Classifications=GAG|Class_I|LTR|Ty1/copia|Tork;Best_Hit=Ty1-GAG__REXdb_ID5204|Class_I|LTR|Ty1/copia|Tork:560-829[100percent];Best_Hit_DB_Pos=1:90of90;DB_Seq=IRLTLAKSVVFNIVNEKTTAGLMKALSDMYKKPSAANKVYLMRRLFNLKMGEGISVTDHINEFNTILAQLESVQIKFEDEVKALILLSSL;Query_Seq=IRLTLAKSVVFNIVNEKTTAGLMKALSDMYKKPSAANKVYLMRRLFNLKMGEGISVTDHINEFNTILAQLESVQIKFEDEVKALILLSSL;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Gmax275_361_rc	dante	protein_domain	1250	1465	402	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Tork;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Tork;Best_Hit=Ty1-PROT__REXdb_ID5202|Class_I|LTR|Ty1/copia|Tork:1250-1465[100percent];Best_Hit_DB_Pos=1:72of72;DB_Seq=WIMDSGASFHTTPSKDLLSNYVSGRFGKVYLADGKSLDIVGRGDINIKTSSGSLWTLHNVRHIPALKRNLIS;Query_Seq=WIMDSGASFHTTPSKDLLSNYVSGRFGKVYLADGKSLDIVGRGDINIKTSSGSLWTLHNVRHIPALKRNLIS;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Gmax275_361_rc	dante	protein_domain	1637	2230	1123	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Tork;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Tork;Best_Hit=Ty1-INT__REXdb_ID5204|Class_I|LTR|Ty1/copia|Tork:1637-2230[100percent];Best_Hit_DB_Pos=1:198of198;DB_Seq=HQRLGHMSEKGMKLMAAKGKLSSLKHVDVGACEHCILGKQKKVSFSRAGKTLKAEKLELVHTDVWGPAPVESVGNSHYYVTFIDDSTRKVWVYFLKNKSDVFSVFKRWKTKVENQTGLKVKNLKSDNGGEYDSQEFKDFCSEHGIRMIKTIPGTPEQNGVAERMNRTLNERARCMRIQSGLPKAFWAEAINTAAYLIN;Query_Seq=HQRLGHMSEKGMKLMAAKGKLSSLKHVDVGACEHCILGKQKKVSFSRAGKTLKAEKLELVHTDVWGPAPVESVGNSHYYVTFIDDSTRKVWVYFLKNKSDVFSVFKRWKTKVENQTGLKVKNLKSDNGGEYDSQEFKDFCSEHGIRMIKTIPGTPEQNGVAERMNRTLNERARCMRIQSGLPKAFWAEAINTAAYLIN;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Gmax275_361_rc	dante	protein_domain	2777	3549	1427	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Tork;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Tork;Best_Hit=Ty1-RT__REXdb_ID5204|Class_I|LTR|Ty1/copia|Tork:2777-3549[100percent];Best_Hit_DB_Pos=1:258of258;DB_Seq=WELAMKDEMTSLQKNKTW-WSLTEFPEGKKALQNRWVYRLKEESDGRRRYKARLVVKGFQQKQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKTAFLHGDLEEDIYMTQPEGFEVPGKENLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFKRCDMDHCCYVKKYTNSYVILVVYVDDMLIAGSSMAEINRLKLQLAENFEMKDLGPAKQILGMRILRNRSEGILKLSQEKYIHKLLDRFYLGDSKTRNTP;Query_Seq=WELAMKDEMTSLQKNKTC/WSLTEFPEGKKALQNRWVYRLKEESDGRRRYKARLVVKGFQQKQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKTAFLHGDLEEDIYMTQPEGFEVPGKENLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFKRCDMDHCCYVKKYTNSYVILVVYVDDMLIAGSSMAEINRLKLQLAENFEMKDLGPAKQILGMRILRNRSEGILKLSQEKYIHKLLDRFYLGDSKTRNTP;Identity=0.99;Similarity=0.99;Relat_Length=1.0;Relat_Interruptions=0.33;Hit_to_DB_Length=1.0
-Gmax275_361_rc	dante	protein_domain	3835	4212	702	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Tork;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Tork;Best_Hit=Ty1-RH__REXdb_ID5204|Class_I|LTR|Ty1/copia|Tork:3835-4212[100percent];Best_Hit_DB_Pos=1:126of126;DB_Seq=YADLGGDFDTKKSTTGYIFTLGGTTVSWKSKLQDRVALSTTEAEYIAISEAAKEMIWLKNFLNELGKEQDDAPMFSDSQSAISLAKNPVFHSRCKHIQLRYHFIRELINDGDLSLLKILGSENPAD;Query_Seq=YADLGGDFDTKKSTTGYIFTLGGTTVSWKSKLQDRVALSTTEAEYIAISEAAKEMIWLKNFLNELGKEQDDAPMFSDSQSAISLAKNPVFHSRCKHIQLRYHFIRELINDGDLSLLKILGSENPAD;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Sitalica164_1034	dante	protein_domain	3004	3273	486	+	.	Name=GAG;Final_Classification=Class_I|LTR|Ty1/copia|Angela;Region_Hits_Classifications=GAG|Class_I|LTR|Ty1/copia|Angela;Best_Hit=Ty1-GAG__REXdb_ID1933|Class_I|LTR|Ty1/copia|Angela:3004-3273[100percent];Best_Hit_DB_Pos=1:90of90;DB_Seq=MLACMEPELQMQFKTNHEAHDMIVALRDMFQTxARAERFNVSKAFVESKLAEGAAVGPHVIKMVGYTQRLEKLGFPLGQELATDFILSSL;Query_Seq=MLACMEPELQMQFKTNHEAHDMIVALRDMFQT*ARAERFNVSKAFVESKLAEGAAVGPHVIKMVGYTQRLEKLGFPLGQELATDFILSSL;Identity=0.99;Similarity=0.99;Relat_Length=1.0;Relat_Interruptions=1.0;Hit_to_DB_Length=1.0
-Sitalica164_1034	dante	protein_domain	3691	3912	417	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Angela;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Angela;Best_Hit=Ty1-PROT__REXdb_ID1924|Class_I|LTR|Ty1/copia|Angela:3691-3912[100percent];Best_Hit_DB_Pos=1:74of74;DB_Seq=WVFDTGSVAHICNSMQGMIRSRSVERGEVDFRVGNNARVAALTVGTMQLHLPSGFIMELNNCYFVPSLSRNILS;Query_Seq=WVFDTGSVAHICNSMQGMIRSRSVERGEVDFRVGNNARVAALTVGTMQLHLPSGFIMELNNCYFVPSLSRNILS;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Sitalica164_1034	dante	protein_domain	4106	4696	1131	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Angela;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Angela;Best_Hit=Ty1-INT__REXdb_ID1933|Class_I|LTR|Ty1/copia|Angela:4106-4696[100percent];Best_Hit_DB_Pos=1:197of197;DB_Seq=PCRLGHISEKRMKKLHSDGLLTSFDFESYETCEACLLGKMTKTPFTGFPERAVDLLELVHSDVCGPMSTTARGGFQYFITFTDDFSRYGYVYLMRHKSETFEKFKEFQNEVENQCGKKIKALRSDRGGEYLSHEFSNHLKSCRIVPQLTPPGTPQRNGVSERRNRTLLDMVRSMMSQSDLPLSFWGYALETAAFTLN;Query_Seq=PCRLGHISEKRMKKLHSDGLLTSFDFESYETCEACLLGKMTKTPFTGFPERAVDLLELVHSDVCGPMSTTARGGFQYFITFTDDFSRYGYVYLMRHKSETFEKFKEFQNEVENQCGKKIKALRSDRGGEYLSHEFSNHLKSCRIVPQLTPPGTPQRNGVSERRNRTLLDMVRSMMSQSDLPLSFWGYALETAAFTLN;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Sitalica164_1034	dante	protein_domain	5188	5945	1389	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Angela;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Angela;Best_Hit=Ty1-RT__REXdb_ID1933|Class_I|LTR|Ty1/copia|Angela:5188-5945[100percent];Best_Hit_DB_Pos=1:253of253;DB_Seq=WQSAMQSETESMGDNxVWNLVDPP-IECKWIYKKKKDMDGNVHIYKARLVAKGFQQVQGVDYDETFSPVVMLKSIRIILAIVAYFDYEIWQMDVKIAFLNGNLAEDVYMIQPEGFVDPKNAGKVCKFQRSIYGLKQASRSWNIRFDEVVKGFDFTKNEEESCVYKKVSGSSVVFLILYVDDILLIGNNIPMLESVKTSLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQDTYIDKVLKRFSMEEAKKGFLP;Query_Seq=WQSAMQSETESMGDN*VWNLVDPP/IECKWIYKKKKDMDGNVHIYKARLVAKGFQQVQGVDYDETFSPVVMLKSIRIILAIVAYFDYEIWQMDVKIAFLNGNLAEDVYMIQPEGFVDPKNAGKVCKFQRSIYGLKQASRSWNIRFDEVVKGFDFTKNEEESCVYKKVSGSSVVFLILYVDDILLIGNNIPMLESVKTSLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQDTYIDKVLKRFSMEEAKKGFLP;Identity=0.99;Similarity=0.99;Relat_Length=1.0;Relat_Interruptions=0.67;Hit_to_DB_Length=1.0
-Sitalica164_1034	dante	protein_domain	6233	6619	727	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Angela;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Angela;Best_Hit=Ty1-RH__REXdb_ID1933|Class_I|LTR|Ty1/copia|Angela:6233-6619[100percent];Best_Hit_DB_Pos=1:129of129;DB_Seq=DASFQTDRDDLKSQSGFVFMLNGGAVSWKSSKQETVANSTTEVEYIAALEAAKEGVWIRNFLIGLGVFPNVSSPLNLYCDNNGAIAQAKEPRNHQKNKHVMRRFHLIRDFVNRGEIKICKIHTDLNISD;Query_Seq=DASFQTDRDDLKSQSGFVFMLNGGAVSWKSSKQETVANSTTEVEYIAALEAAKEGVWIRNFLIGLGVFPNVSSPLNLYCDNNGAIAQAKEPRNHQKNKHVMRRFHLIRDFVNRGEIKICKIHTDLNISD;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Spurpurea289_256_rc	dante	protein_domain	1045	1345	527	+	.	Name=GAG;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=GAG|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-GAG__REXdb_ID1014|Class_I|LTR|Ty1/copia|Ale:1045-1345[100percent];Best_Hit_DB_Pos=1:101of101;DB_Seq=LLGTIEPHLIANLRCFTMAQAMWAY-LRRIYHQDHSAQK-FQLExEINSYSQGNLTIEQFYSSFINIWSEYSAIVHAKVPTAALAALQAVHAESQRDQFFMKL;Query_Seq=LLGTIEPHLIANLRCFTMAQAMWAY/LRRIYHQDHSAQK/IQLE*EINSYSQGNLTIEQFYSSFINIWSEYSAIVHAKVPTAALAALQAVHAESQRDQFFMKL;Identity=0.96;Similarity=0.96;Relat_Length=1.0;Relat_Interruptions=1.5;Hit_to_DB_Length=1.02
-Spurpurea289_256_rc	dante	protein_domain	1817	2011	353	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-PROT__REXdb_ID1014|Class_I|LTR|Ty1/copia|Ale:1817-2011[100percent];Best_Hit_DB_Pos=1:65of65;DB_Seq=LLVDSGASNHMIDNTTDLHDVHEYDGTQSIQIVNGSTHPITAVGNLDSSIKDVFVSPKLSTSLIS;Query_Seq=LLVDSGASNHMIDNTTDLHDVHEYDGTQSIQIVNGSTHPITAVGNLDSSIKDVFVSPKLSTSLIS;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Spurpurea289_256_rc	dante	protein_domain	2201	2790	1070	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-INT__REXdb_ID1014|Class_I|LTR|Ty1/copia|Ale:2201-2790[100percent];Best_Hit_DB_Pos=1:196of196;DB_Seq=HKKLGHPNSVVLTHLLKHGFLGNNNS-SSFDYAICRLGKSKTLPFPVHGNRASTLFEIVHYDVWGASPVISHGQYRYFVIFINDYSRFTWIYFLHSKAGMFSVFQKFVVLVETQFSTCIKILCSDS-GGxYMSNSFQNYLQQKGIISQRSCPYTPKQNGVAERKNRYLLDVVRALLIDSSVPTKFWVEALSTAVYLIN;Query_Seq=HKKLGHPNSVVLTHLLKHGFLGNNNS\SSFDYAICRLGKSKTLPFPVHGNRASTLFEIVHYDVWGASPVISHGQYRYFVIFINDYSRFTWIYFLHSKAGMFSVFQKFVVLVETQFSTCIKILCSDS\GG*YMSNSFQNYLQQKGIISQRSCPYTPKQNGVAERKNRYLLDVVRALLIDSSVPTKFWVEALSTAVYLIN;Identity=0.98;Similarity=0.98;Relat_Length=1.0;Relat_Interruptions=1.5;Hit_to_DB_Length=1.01
-Spurpurea289_256_rc	dante	protein_domain	3343	4106	1381	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-RT__REXdb_ID1014|Class_I|LTR|Ty1/copia|Ale:3343-4106[100percent];Best_Hit_DB_Pos=1:255of255;DB_Seq=WQQAMQEEIQALQDNQTWDLMTCP-PGVKLIGCKWVYSVKFRSDGSLDQYKARLVALGNRQEYGIDYEETFALVAKMTIVRTILALATSQEWSLRQMDVKNTFLHGDFKEEIYMSPPSSMFKTPSSEVCQLRRSLYGLKQAPRVWFDKFRSTLLDFHFIQSQFDSSLFLHKTSAGIVLLLVYVDDIVITRSNTELLKHSQKHLQDSFHMKDLGTLxYFLGLEVxITPTVTLLHQHKYMEEVISLASFQMGNSVLTP;Query_Seq=WQQAMQEEIQALQDNQTWDLMTCP/TGVKLIGCKWVYSVKFRSDGSLDQYKARLVALGNRQEYGIDYEETFALVAKMTIVRTILALATSQEWSLRQMDVKNTFLHGDFKEEIYMSPPSSMFKTPSSEVCQLRRSLYGLKQAPRVWFDKFRSTLLDFHFIQSQFDSSLFLHKTSAGIVLLLVYVDDIVITRSNTELLKHSQKHLQDSFHMKDLGTL*YFLGLEV*ITPTVTLLHQHKYMEEVISLASFQMGNSVLTP;Identity=0.98;Similarity=0.98;Relat_Length=1.0;Relat_Interruptions=1.0;Hit_to_DB_Length=1.0
-Spurpurea289_256_rc	dante	protein_domain	4373	4754	723	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-RH__REXdb_ID1014|Class_I|LTR|Ty1/copia|Ale:4373-4754[100percent];Best_Hit_DB_Pos=1:127of127;DB_Seq=DADWAGCADTCRYVTGWCMFF-SNTLISWKSKKQDRVSKSSTESEYRAMSSAYSEITWLRGLLGELGFPQLQSTPLHADNTNAIQIAANPVFHERTKHNEVDCHSIRESFHxHEITLPHISTEHQTAD;Query_Seq=DADWAGCADTCRYVTGWCMFF\SNTLISWKSKKQDRVSKSSTESEYRAMSSAYSEITWLRGLLGELGFPQLQSTPLHADNTNAIQIAANPVFHERTKHNEVDCHSIRESFH*HEITLPHISTEHQTAD;Identity=0.98;Similarity=0.98;Relat_Length=1.0;Relat_Interruptions=1.0;Hit_to_DB_Length=1.01
-Stuberosum206_200_rc	dante	protein_domain	635	935	264	+	.	Name=GAG;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=GAG|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-GAG__REXdb_ID1200|Class_I|LTR|Ty1/copia|Ale:635-935[100percent];Best_Hit_DB_Pos=1:102of102;DB_Seq=IMNAVRPGLLSSVVYASDAR-KVWLDLRERFDTVNGSRIFQLHREIHSLTQGTMSIADYHSKLRDLWDEYDAIMPCPSCPCPESKNFGEHCDYQRLLQFLMGL;Query_Seq=LMSAVSEDLLSGIVYATSAY\RE--DLKERFDKVNRMRIYQLHREINTLSQGTDSVSTY*TKLKNLWGEFDAFVPSPSCACPKSKEYANHLYQLRLIQFLSGL;Identity=0.53;Similarity=0.71;Relat_Length=1.0;Relat_Interruptions=1.0;Hit_to_DB_Length=1.01
-Stuberosum206_200_rc	dante	protein_domain	1548	1760	189	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-PROT__REXdb_ID1200|Class_I|LTR|Ty1/copia|Ale:1548-1760[100percent];Best_Hit_DB_Pos=1:71of71;DB_Seq=WIIDTGASHHITSDLGLLDKAREVHAxRDSKVHLPNGKVAAVSHIGSTCVLANQSISNVLFLPDFKFNLLS;Query_Seq=WIIDSGASHHITADKHLLANSRCTTDPHHDKVNLPTGDKATISHIGEIFLFDNETVKDVLCVPDFKFNLLS;Identity=0.52;Similarity=0.66;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Stuberosum206_200_rc	dante	protein_domain	1977	2580	538	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-INT__REXdb_ID1202|Class_I|LTR|Ty1/copia|Ale:1977-2559[96percent];Best_Hit_DB_Pos=1:194of194;DB_Seq=HKRLGHAPIDVIKRHESLSYLSNKDQS---HCTVCPISKQTKLPFALSTHKSKAV-FELLHCDLWGPYRVPTHNGKRFFVTIVDDYSRYTWIFLVTSKVDTIVVIKHFLLQVQNVFSTTVKTFRTDNGCEFFSKDFQNLMCEMGIIHQSTCVYTPQQNGIAERKHRTILAVARSLRFQASIPLRYWGECVTTAVYILN;Query_Seq=HRRLGHPSSHILKCLDLLH--SNKDVELLNSCLVCPLAKQTRLSFPISNSKT-SV\FELVHMDLWGPYKIPTFDKKHYFLTIVDDYSRYTWIHLLQLKSETIVAIKNFLLMIKNQFGHTIKTVRSDNGTEFFNSQCKELFLNLGISDQSNCPHIPQQNGVVERKHRHILNVARAIRFQACMPLRYWGLCVKATVYLIN;Identity=0.54;Similarity=0.7;Relat_Length=1.0;Relat_Interruptions=0.5;Hit_to_DB_Length=1.02
-Stuberosum206_200_rc	dante	protein_domain	3252	3996	798	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-RT__REXdb_ID1202|Class_I|LTR|Ty1/copia|Ale:3252-3996[100percent];Best_Hit_DB_Pos=1:256of256;DB_Seq=WVKAMELEIAALESNKTWSIVDLPPGKKPIGCKWIYKIKFLA-SGEVERFKARLVAKGFSQQEGLDYGETFSRVAKMVTVRSVVALAASRGWFIYQMDVHNAFLNGDLHEEVYMVIPNGFARQGECQKVCKLHKSLYGLKQAPRQWNMKLTEALVQMGFKQSHYDYSLFTKQAGDAVVVILVYVDDLLITGSSHELLCRTRQDIQKRFKMKDLGELKFFLGIEFSRSSKGILMTQRKYALELVSETGLGGAKPVHTP;Query_Seq=WIDAMKLEIKALEDNKTWMVVDLRKDKHAVGSKWI-------\NGEVERFKARLVAKGYSQHEGIHYHDTFSPVAKMVTVRCVIALAVSKGWSLYQMDVYNAFLQGDVDEEVYIEMPEGFRTQGTT-KVCKLIKSLYGLKQASRQWNIKLTNTLLSAGFIQSSHDYSLFTLKKPEGMVIILIYVDDLLITGDNEALIKEVNETLHKQFKLKDLGELKYFLGIEVLRSKNGIILNQRKYMLELISNTGLSGAKTTATP;Identity=0.61;Similarity=0.74;Relat_Length=1.0;Relat_Interruptions=0.33;Hit_to_DB_Length=1.0
-Stuberosum206_200_rc	dante	protein_domain	4084	4200	82	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-RH__REXdb_ID3204|Class_I|LTR|Ty1/copia|Ivana:4084-4200[100percent];Best_Hit_DB_Pos=12:50of134;DB_Seq=YRSLIGCLMYLTATRPDIMHAVSLLSKKQEIIAQSTAEA;Query_Seq=YQRLVGKLMYATITRPDISYAVQTLSQFMQHPKRSHWEA;Identity=0.49;Similarity=0.64;Relat_Length=0.291;Relat_Interruptions=0.0;Hit_to_DB_Length=0.29
-Stuberosum206_200_rc	dante	protein_domain	4291	4653	479	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Ale;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Ale;Best_Hit=Ty1-RH__REXdb_ID1202|Class_I|LTR|Ty1/copia|Ale:4291-4638[95percent];Best_Hit_DB_Pos=1:116of127;DB_Seq=DSDWGACLETRKSVTGYLVKFGGGLISWKSKKQGTVSRSSAEAEFRSMAACAAEVTWLIGLYKELGVSLTLPIKMVCDSKAAIQIAANPIFHERTKHIDIDCHFVRERICQGILQT;Query_Seq=DSDWAACPKTRRSVTGYIVKFGESIVSWKSKKQQTISRSSAEAEYRSMTSAVAEVTWLIGLFKELNVSIQMPITVLSDSKSAIQLAANPVFHERTKHIEIDCHFIRDKVKAGVIQT;Identity=0.68;Similarity=0.88;Relat_Length=0.913;Relat_Interruptions=0.0;Hit_to_DB_Length=0.91
-Vvinifera145_640	dante	protein_domain	1451	1663	387	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-PROT__REXdb_ID2615|Class_I|LTR|Ty1/copia|Bianca:1451-1663[100percent];Best_Hit_DB_Pos=1:71of71;DB_Seq=CLADCATTHTILQDKRYFLELTLIKANVSNIYGTTNLVEGSGRANITLSNGTRFHINDALYSSKSRRNLLS;Query_Seq=CLADCATTHTILQDKRYFLELTLIKANVSNIYGTTNLVEGSGRANITLSNGTRFHINDALYSSKSRRNLLS;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Vvinifera145_640	dante	protein_domain	1880	2488	1166	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-INT__REXdb_ID2615|Class_I|LTR|Ty1/copia|Bianca:1880-2488[100percent];Best_Hit_DB_Pos=1:203of203;DB_Seq=HDRLGHPGSSMMRRIIEHSHGHPLKNQKILSPNEYSCAACLQGKLIIRPSFTKVISESPIFLERIHGDICGPIHPPCGPFRYFMILIDASTRWSHVCLLSTRNVAFARLLAQIIRLRAQFPDYPIKTIRLDNVGEFTSQTFIDYCMLVxINIEHPVAHTHTQNGLAESFIKRLQLIARPLLMKTKLPTSAWGHAIMHTAVLVR;Query_Seq=HDRLGHPGSSMMRRIIEHSHGHPLKNQKILSPNEYSCAACLQGKLIIRPSFTKVISESPIFLERIHGDICGPIHPPCGPFRYFMILIDASTRWSHVCLLSTRNVAFARLLAQIIRLRAQFPDYPIKTIRLDNVGEFTSQTFIDYCMLV*INIEHPVAHTHTQNGLAESFIKRLQLIARPLLMKTKLPTSAWGHAIMHTAVLVR;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.33;Hit_to_DB_Length=1.0
-Vvinifera145_640	dante	protein_domain	3419	4212	1416	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-RT__REXdb_ID2615|Class_I|LTR|Ty1/copia|Bianca:3428-4212[98percent];Best_Hit_DB_Pos=1:262of262;DB_Seq=WKEAIHAELNSLTKREVFGPVVQTPEDVKPVGCKWVFVRKRNENNEIIRYKAQLVAQGFSxRPGIDYEETYSPVMDAITFRFLISLAVSERLDIRLMDVITTYLYGSMDNDIYM-MKIPExFKLPEANNTKPRSMYSIKLQRSxYGLKxSGRMWYNRLSEYLLKEGYVNNPICPCIFIKSEMGFAIIIVYVDDLNLVGTLEELTRTTNYLKKEFETKDLGKTKSCLGLQIEHFPNGVLVHQSTFIKKVLKCFYMDKAHHLSSP;Query_Seq=WKEAIHAELNSLTKREVFGPVVQTPEDVKPVGCKWVFVRKRNENNEIIRYKAQLVAQGFS*RPGIDYEETYSPVMDAITFRFLISLAVSERLDIRLMDVITTYLYGSMDNDIYI/MKIPE*FKLPEANNTKPRSMYSIKLQRS*YGLK*SGRMWYNRLSEYLLKEGYVNNPICPCIFIKSEMGFAIIIVYVDDLNLVGTLEELTRTTNYLKKEFETKDLGKTKSCLGLQIEHFPNGVLVHQSTFIKKVLKCFYMDKAHHLSSP;Identity=0.98;Similarity=0.98;Relat_Length=1.0;Relat_Interruptions=1.67;Hit_to_DB_Length=1.0
-Vvinifera145_640	dante	protein_domain	4507	4908	760	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-RH__REXdb_ID2615|Class_I|LTR|Ty1/copia|Bianca:4507-4908[100percent];Best_Hit_DB_Pos=1:134of134;DB_Seq=DAGYFSDPHKGRSxIRYVFNCNGTAISWRSVKQTMVVTSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSSIKGDPTILFEDNVACIAQIAEGYIKGDRTKHISPKFFYTHELQKSGEIDVQQIRSSDNLAD;Query_Seq=DAGYFSDPHKGRS*IRYVFNCNGTAISWRSVKQTMVVTSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSSIKGDPTILFEDNVACIAQIAEGYIKGDRTKHISPKFFYTHELQKSGEIDVQQIRSSDNLAD;Identity=0.99;Similarity=0.99;Relat_Length=1.0;Relat_Interruptions=0.5;Hit_to_DB_Length=1.0
-Fexcel_5	dante	protein_domain	527	859	447	+	.	Name=GAG;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=GAG|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-GAG__REXdb_ID3008|Class_I|LTR|Ty1/copia|Ivana:581-859[83percent];Best_Hit_DB_Pos=1:93of93;DB_Seq=LFQSIDKSILKTIAQKETPKQLWDSMKVKYQGNARVQRAQLQILRRNFEVLEMKLGESVTNYFARVMLVANDMRNLGENMPDVKIVEKILRTL;Query_Seq=LFHSIDKSILKTITQKETSRQLWESMRIKYQGNARVQRAQLQTLRRDFEVLEMKLGESMTNYFARVMLVANDMRNCGEDMPDVKIVEKILRTL;Identity=0.87;Similarity=0.96;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Fexcel_5	dante	protein_domain	1241	1453	312	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-PROT__REXdb_ID3199|Class_I|LTR|Ty1/copia|Ivana:1241-1453[100percent];Best_Hit_DB_Pos=1:71of71;DB_Seq=WFLDSGCSNHMTGDKQWFVHLDETFRHTVKLGNNTKMTVMGKGSIKLRVNGINQVITEVYYLPELKNNLLS;Query_Seq=WFLDSGCSNHMTGNKQWFTELDEGYRHSVKLGNNMKMAVMGKGSIKLQVGEVKQVVSDVYYIPDLKNNLLS;Identity=0.75;Similarity=0.89;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Fexcel_5	dante	protein_domain	1646	2281	875	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-INT__REXdb_ID3824|Class_I|LTR|Ty1/copia|Ivana:1646-2245[94percent];Best_Hit_DB_Pos=1:200of200;DB_Seq=HCRYGHLSFKGLRTLQYKKMVRGLPQLKASSKVCTDCMVGKQHRDAIPKRSLWRASQRLQLVHADICEPIKPVSNSKKRYLISFIDDYSRKVWIYFLTEKSEAFTTFKNYKNLVEKETGAFICCLRTDRGGEFTSLEFNAFCKTNGISRQLTAAYTPQQNGVAERKNRTIMNMVRSMLSEKQVPKNFWPEAVNWTAHVLN;Query_Seq=HQRFGHLSHKGLLTLQCKKLVKGLPQFKSTSRVCTICMIGKQHRDTIPKKSKWRASERLQLIHADICGPVTPTSNSGKRYMLSFIDDYSRKIWVYFLVEKSETFAWFKVFKSLVEKELGLYICCLRTDRGGEFTSKEFNEFCTVHGIKRQLTTAYTPQQNGVAERKNRTIMNMVRCLLTEKKIPKAFWPEAVKWTAHILN;Identity=0.74;Similarity=0.85;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Fexcel_5	dante	protein_domain	2849	3641	1121	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-RT__REXdb_ID3636|Class_I|LTR|Ty1/copia|Ivana:2864-3633[97percent];Best_Hit_DB_Pos=1:257of257;DB_Seq=WKAAMDLEIDAIVKNRTWDLVDLPMGAKKIGVKWVYKTKLNENGEVDKYKARLVAKGYAQEHGIDYNEVFAPVARWDTIRMV-LAVAAQKGWMVFQLDVKSAFLHGDLKEAVFVEQPQGYEQEGSKEKVYKLKKALYGLKQAPRAWYSKIENYFLKEGFERCNHESTLFVKTNAGGKVLIISLYVDDLIFTGNDACLIEKFKCSMKSEFEMTDLGKMRYFLGVEVLQSAKGIHLCQKKYANDVLNRFGMKECNPVKNP;Query_Seq=WRSAMDLEIESIIKNKTWELVDLPVGAKRIGVKWVYKTKLNEKGEFDKCKARLVAKGYAQEYGIDYNEVFAPVARWDTIRMG/LALAAQKGWTVFQLDVKSAFLHGELREAVYVDQPLGYIKEGEENKVYKLKKALYGLKQAPRAWYSRIEGYFVKAGFEKCSYEHTLFIKVEGEGKILIVSLYVDDLIFTGNDVCMIENFKSSMMHEFEMTDLGKMKYFLGVEIKQSVEGIHLCQSKYAREVLDRFGMANSNPVRNP;Identity=0.76;Similarity=0.88;Relat_Length=1.0;Relat_Interruptions=0.33;Hit_to_DB_Length=1.0
-Fexcel_5	dante	protein_domain	3661	3774	114	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-RH__REXdb_ID3204|Class_I|LTR|Ty1/copia|Ivana:3661-3774[100percent];Best_Hit_DB_Pos=1:38of134;DB_Seq=DDGADKVDEAIYRSLIGCLMYLTATRPDIMHAVSLLSK;Query_Seq=EDGGAEVDGTLYKQLVGSLMYLNATRPDLMYVVCLISR;Identity=0.53;Similarity=0.76;Relat_Length=0.284;Relat_Interruptions=0.0;Hit_to_DB_Length=0.28
-Fexcel_5	dante	protein_domain	3901	4281	568	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-RH__REXdb_ID3539|Class_I|LTR|Ty1/copia|Ivana:3901-4281[100percent];Best_Hit_DB_Pos=1:127of127;DB_Seq=DSDYAGDTEDRRSTSGYVFLLSGGAVAWSSRKQPVVTLSTTEAEYVAAAACACHSIWMKRVLNSLGFSSCKCVKIFCDNSSTIKLSKNPVLHGRTKHIDIKFHFLRDLVKEGVVELVHCGTSEQMAD;Query_Seq=DSDYAGDSDDSRSTSGFAFMLSGGAVSWSSRKQSVVTLSTTEAEYVAAAACACQSIWMQRVFNKLSHTQCKCVTIFCDNSSTIKLSKNPVFHGRSKHINVRFHFLRDLTKDGIVKLEFCGSSEQLAD;Identity=0.76;Similarity=0.9;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Pabies_54	dante	protein_domain	1207	1476	481	+	.	Name=GAG;Final_Classification=Class_I|LTR|Ty1/copia|Gymco-II;Region_Hits_Classifications=GAG|Class_I|LTR|Ty1/copia|Gymco-II;Best_Hit=Ty1-GAG__REXdb_ID2667|Class_I|LTR|Ty1/copia|Gymco-II:1207-1476[100percent];Best_Hit_DB_Pos=1:90of90;DB_Seq=IADSINDHLIPCVSSKNTLKEMFDSLSKLYEGKNINRKMNLRSQLKNTKMQKGETIQEYFSRISEIKKQxKAIGDSIDEDEFVMTALNGL;Query_Seq=IADSINDHLIPCVSSKNTLKEMFDSLSKLYEGKNINRKMNLRSQLKNTKMQKGETIQEYFSRISEIKKQ*KAIGDSIDEDEFVMTALNGL;Identity=0.99;Similarity=0.99;Relat_Length=1.0;Relat_Interruptions=1.0;Hit_to_DB_Length=1.0
-Pabies_54	dante	protein_domain	1966	2183	374	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Gymco-II;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Gymco-II;Best_Hit=Ty1-PROT__REXdb_ID2667|Class_I|LTR|Ty1/copia|Gymco-II:1966-2183[100percent];Best_Hit_DB_Pos=1:73of73;DB_Seq=WLIDSGASKHMTRx-ESTLSCISENKFSQKVTLGDDYQYPIKGVGESNYKLDSENSIKMKDVLYVPGLKKNLLS;Query_Seq=WLIDSGASKHMTGK/ESTLSCISENKFSQKVTLGDDYQYPIKGVGESNYKLDSENSIKMKDVLYVPGLKKNLLS;Identity=0.96;Similarity=0.96;Relat_Length=1.0;Relat_Interruptions=1.0;Hit_to_DB_Length=1.01
-Pabies_54	dante	protein_domain	2370	3035	1130	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Gymco-II;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Gymco-II;Best_Hit=Ty1-INT__REXdb_ID2667|Class_I|LTR|Ty1/copia|Gymco-II:2370-2963[89percent];Best_Hit_DB_Pos=1:198of198;DB_Seq=HRRLAHINYKALPYICKVVTGLPELKVDQEGICNGCAQGKNIKNPFPKRDSKAEGVLELIHSDVCGPMPSSSISGYVYYVSFIDDYSRKTWIYFLKSKDEVFSKFKEFKALIENLSERKIKILRSDNGGAYTSKEFVNFCRDVGINKELTTPYNPQQNGVAERKNRTIMEVVKTMIHDQDLPMCLWAEAAMAVVYVQN;Query_Seq=HRRLAHINYKALPYICKVVTGLPELKVDQEGICNGCAQGKNIKNPFPKRDSKAEGVLELIHSDVCGPMPSSSISGYVYYVSFIDDYSRKTWIYFLKSKDEVFSKFKEFKALIENLSERKIKILRSDNGGAYTSKEFVNFCRDVGINKELTTPYNPQQNGVAERKNRTIMEVVKTMIHDQDLPMCLWAEAAMAVVYVQN;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Pabies_54	dante	protein_domain	3600	4315	1347	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Gymco-II;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Gymco-II;Best_Hit=Ty1-RT__REXdb_ID2667|Class_I|LTR|Ty1/copia|Gymco-II:3600-4315[100percent];Best_Hit_DB_Pos=1:239of239;DB_Seq=WADAMTEEYQSIIKNDVWQIVPKPKSKDMVSSKWLFKIKHAADGSIEKYKARFVPRGFSQKEGIDYEETFAPVARYTSIRTIIALAAKMKWKLHQMYVKTTFLNGVIEEEVYIEQPQGFEVEDRKSHVCRLKKALYRLKQAPRAWYGRIDSFLTSLGFTKSKVDSNLYFKIMNDEPVILLLYVDDLFLTREEKIITEC-HYFLGLEVWQSPERIFLNQGKYTVEILKRFDMLECKPMNTP;Query_Seq=WADAMTEEYQSIIKNDVWQIVPKPKSKDMVSSKWLFKIKHAADGSIEKYKARFVPRGFSQKEGIDYEETFAPVARYTSIRTIIALAAKMKWKLHQMYVKTTFLNGVIEEEVYIEQPQGFEVEDRKSHVCRLKKALYRLKQAPRAWYGRIDSFLTSLGFTKSKVDSNLYFKIMNDEPVILLLYVDDLFLTREEKIITEC/HYFLGLEVWQSPERIFLNQGKYTVEILKRFDMLECKPMNTP;Identity=1.0;Similarity=1.0;Relat_Length=1.0;Relat_Interruptions=0.33;Hit_to_DB_Length=1.0
-Pabies_54	dante	protein_domain	4343	4456	102	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Ivana;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Ivana;Best_Hit=Ty1-RH__REXdb_ID3204|Class_I|LTR|Ty1/copia|Ivana:4343-4456[100percent];Best_Hit_DB_Pos=1:38of134;DB_Seq=DDGADKVDEAIYRSLIGCLMYLTATRPDIMHAVSLLSK;Query_Seq=DTSSDLIDATLYRQIIGLLMYLTNTRPNICFAVNTLSQ;Identity=0.53;Similarity=0.68;Relat_Length=0.284;Relat_Interruptions=0.0;Hit_to_DB_Length=0.28
-Pabies_54	dante	protein_domain	4583	4966	675	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Gymco-II;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Gymco-II;Best_Hit=Ty1-RH__REXdb_ID2667|Class_I|LTR|Ty1/copia|Gymco-II:4583-4966[100percent];Best_Hit_DB_Pos=1:128of128;DB_Seq=DSDWAGSVADRKSTSGCCFSLGSAMISWQSRKQSSVALSIAEAEYIVACSASCEAIWLRKLLIGLF-DLEMEATTILCDNQSCIKM-XXXNPVFHDRSKHIEIRYHYIRDMVQRGALKLQYISTDEQVAD;Query_Seq=DSDWAGSVADRKSTSGCCFSLGSAMISWQSRKQSSVALSIAEAEYIVACSASCEAIWLRKLLIGLL/DLEMEATTILCDNQSCIKM\XXXNPVFHDRSKHIEIRYHYIRDMVQRGALKLQYISTDEQVAD;Identity=0.95;Similarity=0.95;Relat_Length=1.0;Relat_Interruptions=1.0;Hit_to_DB_Length=1.02
-Wicker_Bianca_AF521177-1	dante	protein_domain	683	830	86	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand;Region_Hits_Classifications=RH|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand;Best_Hit=Ty3-RH__REXdb_ID8306|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand:683-830[100percent];Best_Hit_DB_Pos=57:105of253;DB_Seq=SAHPHPVSTRPG-REQGGEAPEPNGGLRPPTAGAGPPPACPTVPGAPDPQ;Query_Seq=SHHPHLEHPDQG\EEEGMEAMGSSSSLRPPSPAIPPPPPAPPLPLTPPPE;Identity=0.4;Similarity=0.48;Relat_Length=0.194;Relat_Interruptions=1.0;Hit_to_DB_Length=0.2
-Wicker_Bianca_AF521177-1	dante	protein_domain	2214	2483	350	+	.	Name=GAG;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=GAG|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-GAG__REXdb_ID2562|Class_I|LTR|Ty1/copia|Bianca:2214-2483[100percent];Best_Hit_DB_Pos=1:90of90;DB_Seq=LRHHLHPDLKSEYMTEKDPLVLWQSLKDRFDQQGSIVLPQAQHDWITLRFQDYKSVAAYNSALHRIISQLRLCGQKITDAEMIEKTLSTF;Query_Seq=LRHHLHSDLKSEYLMEEDPLVLWNSLKERYDQQRAVMLPEAQREWSLIRFQDFKSVAAYNSAVHKVNSKLRFCNQEISEEDLIEKTLCTF;Identity=0.64;Similarity=0.87;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Wicker_Bianca_AF521177-1	dante	protein_domain	3336	3548	307	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-PROT__REXdb_ID2563|Class_I|LTR|Ty1/copia|Bianca:3336-3548[100percent];Best_Hit_DB_Pos=1:71of71;DB_Seq=CLVDSCTTNSILRETKYFQTLTKRTGNVLTIAGRDATIVGSGRATITLPMGTQVTIEDALLYPDSTRTLLS;Query_Seq=CLVDSCTSNTILREIKYFQTLTKRKGNIMTIDSRDASIIGSGRATLVLPMGSTIAIEDALLYPQSTRTLLS;Identity=0.76;Similarity=0.89;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Wicker_Bianca_AF521177-1	dante	protein_domain	3762	4370	921	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-INT__REXdb_ID2589|Class_I|LTR|Ty1/copia|Bianca:3762-4370[100percent];Best_Hit_DB_Pos=1:203of203;DB_Seq=HDRLGHPGIGMMRKIISNSNGHELNTAKFPKSSDFMCTSCATGKLILRPSPVKIQNEPLKFLERIQGDICGPIQPTSGPFRYFMVLIDASTRWSHVCLLSTRNHAFAKIIAQLIKLRAHNPEHQIQSIRMDNAAEFSSKAFNDYCMALGIQVQHSVPYVHTQNGLAESLIKRIKLIARPLIQNCNLPTSCWGHAVLHAADLIQ;Query_Seq=HDRLGHPGVGMMTKIIDNSIGHSLPTINFSKLSDFVCTACATGKLIIKPSYLKVKNESLNFLERIQGDICGPIQALSGPFRYFMVLIYASTRWSHVCLLSTRNHAFSQLIDQIIKLRANHPKNRIKTIRMDNAAEFSSRAFNDYCMAMGIHLEHFVPYVHTQNGLAESLIKRVKLVARPLLQNCNLPASCWAHAVLHAADLIQ;Identity=0.77;Similarity=0.89;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-Wicker_Bianca_AF521177-1	dante	protein_domain	5271	6058	1172	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-RT__REXdb_ID2589|Class_I|LTR|Ty1/copia|Bianca:5280-6058[98percent];Best_Hit_DB_Pos=1:260of260;DB_Seq=WKEAIKAEIASLTKRGVFTKAIPTPSKVFPVGFKWVFVRKRNENNEVVRYKARLVAQGFTQRPGIDYNETYSPVMSGITFRYLISLAVQNHLSMQLMDVVTAYLYGSLDSDIYMKVPDGIQIPNPNANRNMYCVKLQKSLYGLKQSGRMWYNRLSEFLLNKGYTNNDDCPCVFIKKSQTGFCIISVYVDDLNIIGSPKDIEEARKHL-KTEFEMKDLGKTKYCLGLQIEHRPLGILVHQSAYIQKILEKFNMDKSYPNKTP;Query_Seq=WKEAIEAEVRSLNKREVFSSVIPTPHNVFPVGAKWVFVRKRNENNEVVRYKARLVAQGFTQRPDIDYDDTYSPVMSGITFRYLISLAVQMNLSMQLMDVVTTYLYGSLKSDIYMKVPE*LKMSNPKENRNAYCVKLQKSLYGLKQSGRMWYNRLSEFLIQKGYSNNDDCPCVLIKKSSNGFCIISVYVDDLNIMGSTPDIEEAHNHL/NGEFEMKDLGKTKFCLGLQLEHLPSGILVYQPAYIQKVLENFNMDKSYPTKTP;Identity=0.81;Similarity=0.87;Relat_Length=1.0;Relat_Interruptions=0.67;Hit_to_DB_Length=1.0
-Wicker_Bianca_AF521177-1	dante	protein_domain	6353	6767	384	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-RH__REXdb_ID2595|Class_I|LTR|Ty1/copia|Bianca:6353-6767[100percent];Best_Hit_DB_Pos=1:133of133;DB_Seq=DAGYLSDPHNARSQSGFVFLHGGTAISWKSSKQTLVATSTNHS-EIISLFEASRECVWLRRMINHIQKSCGIGSIESPTIIYEDNAACVAQMQTRYIKTNI---TKHISPKWFFPHVLQKKGEINIL--QIKSCENLAD;Query_Seq=DXCYLSDPHNVRSQTGFVFLYGGTAFSWKSTKQTLLATSTNHS\ELVAFFEAS*DCVWLRRMINPIQTSCGVGSLGSPTIIYEDNAASPLSQNANVVYVRK*YPHTYILPKVILILSALQKGWRNLIFSQIKSCANLAD;Identity=0.59;Similarity=0.7;Relat_Length=1.0;Relat_Interruptions=1.5;Hit_to_DB_Length=1.05
--- a/tmp/single_fasta.gff3	Wed Jul 03 08:10:33 2019 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,26 +0,0 @@
-##gff-version 3
-##-----------------------------------------------
-##PIPELINE VERSION         : dante-rv-3081(adb2509)
-##PROTEIN DATABASE VERSION : Viridiplantae_v3.0_pdb
-##-----------------------------------------------
-scaffold146.1|size86774	dante	protein_domain	976	1289	293	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-RH__REXdb_ID2558|Class_I|LTR|Ty1/copia|Bianca:976-1289[100percent];Best_Hit_DB_Pos=26:134of134;DB_Seq=ISWRSVKQTITATSSNHAELLALHEASRECVWLRSMIQHIQKNCG-LSSGRMDATIIYEDNTACIAQLKEGYIKGDRTKHISPKFF-FTHDLQKDGDISIQQIRSCDNLAD;Query_Seq=ISWRSTKQTIVAISSNHVELLAIHDTSRECVWLRFMIESI-----\IMXXXXXXXXXXXXXXXXXXQLKE*YIKCDRTKHISPKFF\FTQDLQKNGDVIIQQIRSNDNVVD;Identity=0.59;Similarity=0.66;Relat_Length=0.813;Relat_Interruptions=1.5;Hit_to_DB_Length=0.83
-scaffold146.1|size86774	dante	protein_domain	6810	7049	153	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand;Region_Hits_Classifications=PROT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand;Best_Hit=Ty3-PROT__REXdb_ID9702|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand:6810-7049[100percent];Best_Hit_DB_Pos=1:80of80;DB_Seq=LVDDGSKVNLLPYRVFQQMGIPEEQLVRDQAPVKGIGGVPVLVEGKVKLALTLGEAPRTRTHYAVFLVVKPPLSYNAILG;Query_Seq=LVDSGASCNLMSKRVMKQMGIPDEKLEFLDATLYAFDRRTIIPAGKIQLPVTLGEEERTRSEMVEFIIVDMDLAYNAILG;Identity=0.44;Similarity=0.62;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-scaffold146.1|size86774	dante	protein_domain	7656	8296	.	+	.	Name=RT/INT;Final_Classification=Ambiguous_domain;Region_Hits_Classifications_=RT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand[246bp],INT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand[468bp]
-scaffold146.1|size86774	dante	protein_domain	8756	9241	538	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat;Region_Hits_Classifications=RT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand[486bp],RT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Ogre[441bp];Best_Hit=Ty3-RT__REXdb_ID8210|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand:8801-9241[90percent];Best_Hit_DB_Pos=27:173of173;DB_Seq=DFTDLNKACPKDSFPLPHIDRLVDSTAGNELLTFMDAFSGYNQIMMNPEDQEKTSFITDRGIYCYKVMPFGLKNAGATYQRLVNKMFHNHLGKTMEVYIDDMLVKSLKKEDHVKHLEECFDILNKYQMKLNPAKCTFGVPSGEFLGY;Query_Seq=DFKGVNKHCQPDPFPLPHIDRLVDAVAGSSLLSTMDAYSGYHQISLAREDQAKSSFLTEDGVFCYVVMPFGLRNAGATYQRLVNKIFADLLGKEMEIYVDDMIVKSLNDEDHIIYLSHCFEVCRTHRLKLNPAKCCFGVRSGKFLGY;Identity=0.63;Similarity=0.8;Relat_Length=0.85;Relat_Interruptions=0.0;Hit_to_DB_Length=0.85
-scaffold146.1|size86774	dante	protein_domain	9433	9781	343	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand;Region_Hits_Classifications=RH|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand;Best_Hit=Ty3-RH__REXdb_ID9729|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand:9434-9772[97percent];Best_Hit_DB_Pos=1:113of149;DB_Seq=WTEECEEAFQKLKEYLGSPHLLVKPIQGEPLFLYLAVSEHATSSVLVREDDGVQRPIYYTSRALVDAETRYLSLEKIVLALIVSARRLRPYFQAHTIIVLTDQPIRQVLAKPD;Query_Seq=WTDQCDRAFKELKTYLASPPLIVSPTPTETLGLYLAVSEHAVSSVLVAERDGVQHPVYYVSHTLLPAESRYSTVEKFVLALLKSVAKLRHYFESRKVIVYTDQPIKAVLGQSD;Identity=0.58;Similarity=0.73;Relat_Length=0.758;Relat_Interruptions=0.0;Hit_to_DB_Length=0.76
-scaffold146.1|size86774	dante	protein_domain	10810	11667	747	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand;Region_Hits_Classifications=INT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand;Best_Hit=Ty3-INT__REXdb_ID9633|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand:10819-11667[98percent];Best_Hit_DB_Pos=30:310of310;DB_Seq=RDTHQYVQRCIQCQKFAPLIHKPGEEMTIMSAPCPFAQWGIDLVGPFPQTAGRKKFFIVAVDYFTKWVEAEALSKITEDEVMHFIWKYICCRFGLPRSLVSDNGTQFNGKKIRAWCEEMKITQKFVAVAHPQANGQVESTNRTIVNGLKKRIDELGGSWVDELPSVLWSYRTSAKAATGETPFRLTYGTEAVIPVEVAMDTLRIATF--DEEANDGALRTRLDEIFDLREAAYLHMERSKNLIKARYDQGVRSRSFQIGDLILRRADALKHTGKLEANWEGPY;Query_Seq=RDAMDCVRRCQSCQYFAPINRKPGAEITLTELPCPFDRWGIDILGPFPQSVRQRRFCIVAVEYHSKWIEAEAVASITSEAVKKFVMNNIIVRFGCPRVLVSDNGPQFISDKFATFCEEYGIQQRTSSVYHPQTNGQAEASNKIILHGLRRNLDSLGGSWPDQLPHVLWAYRTTPKSSTGETPFSLVYGSEAVAPVESTIITPRIAAYMHTESANTEFRELDLDLLEERRNEVYGRVRKQQRALRKRYNQRVRPRQFEKGDLILRSVESQGHKGKLDRAWEGPY;Identity=0.49;Similarity=0.66;Relat_Length=0.906;Relat_Interruptions=0.0;Hit_to_DB_Length=0.91
-scaffold146.1|size86774	dante	protein_domain	14592	14828	289	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Region_Hits_Classifications=PROT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Best_Hit=Ty3-PROT__REXdb_ID6659|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila:14592-14828[100percent];Best_Hit_DB_Pos=1:80of80;DB_Seq=MLDLGASINVMPYSIYNSLNLGPMEETCIIIQLADRSNAYPKGVMEDVLVQVNELVFPADFYILKMEDELSPNPTPILLG;Query_Seq=MVDLGASINLMPYSIYSALQLGPLQGTAIVIKLADRSNTHPEGVIEDVLVQVNNLVFPADFYVLKM-GKAENNDCPLLLG;Identity=0.68;Similarity=0.84;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-scaffold146.1|size86774	dante	protein_domain	15420	15995	871	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Region_Hits_Classifications=RT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Best_Hit=Ty3-RT__REXdb_ID6635|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila:15420-15995[100percent];Best_Hit_DB_Pos=1:192of192;DB_Seq=IYPITDSKWVAPIHVVPKKTGITLVKNKNDELIPTRISSGWRMCVDYRKLNLATRKDHFPLPFMDQMLERLAGKSFYCFLDGYSGYNQIVINPEDQEKTTFTCPFGTYAYRRMPFGLCNAPATFQRCMMSIFSDYVERIIEVFMDDFTVYGDSFDKCLENLSLILKRCIETNLVLNYEKCYFMVEQGIVLGH;Query_Seq=IYAISDSDWVSPVHVVPKKTGFTVERNKNGELVPKRVTNGWRVCIDYRKLNDATRKDHFPLPFIDQMLERLAGKKFYCFLDGYSGYNQVAIAPEDQEKTTFTCTYGTYAFRKMPFGLCNAPATFQRCMLSIFSEFTGKFIEVFMDDFTVYGDSFEGALENLEKVLQRCVEKKLVLNSEKCHFMVRQGIVLGH;Identity=0.76;Similarity=0.88;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-scaffold146.1|size86774	dante	protein_domain	16188	16634	623	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Region_Hits_Classifications=RH|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Best_Hit=Ty3-RH__REXdb_ID6648|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila:16188-16634[100percent];Best_Hit_DB_Pos=1:149of149;DB_Seq=FNEACKVAFDKLKELLTSAPIIQPPDWSLPFEIMCDASNYVVGAVLGQRVGRAAHVIYYTSRTLDSAQCNYSTTEKELLAIVFALEKFRSYLLGTKVIIFSDHAALRYLLAKKEAKPRLIRWILLLQEFNLEIRDKKGTENLVADHLSR;Query_Seq=FNQECQEAFNKLKSLLTAAPIIQPPNWELPFELMCDASNYALGAVLGQKIEGKRHVIYYASKTLSEAQIHYTTTEKELLAIVYALEKFRSYLLGTKITVHSDHAALRHLLSKKESKPRLIRWILLLQEFDLEIKDRAGTENAVADNLSR;Identity=0.74;Similarity=0.87;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-scaffold146.1|size86774	dante	protein_domain	24522	24659	149	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-PROT__REXdb_ID2599|Class_I|LTR|Ty1/copia|Bianca:24531-24659[93percent];Best_Hit_DB_Pos=29:71of71;DB_Seq=STISGTTNLVEGSGRANIMLPNGTRFHINDALYSSKSRRNLLS;Query_Seq=STIVCEANIVEGSGRATVVLPSGTHIRIDDALYANKSRRNLLS;Identity=0.65;Similarity=0.77;Relat_Length=0.606;Relat_Interruptions=0.0;Hit_to_DB_Length=0.61
-scaffold146.1|size86774	dante	protein_domain	24873	25481	913	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-INT__REXdb_ID2558|Class_I|LTR|Ty1/copia|Bianca:24873-25481[100percent];Best_Hit_DB_Pos=1:203of203;DB_Seq=HERLGHPGSIMMRKIIEHSCGHQLKSREILQSNKFSCTSCSQGKLITRPSPTKIGSESLNFLERIHGDICGPIHPPCGPFRYFMVLIDASTRWSHVCLLSTRNQAFARLLAQLIRIRAHFPDYPVKKIRLDNAAEFSSQTFNDYCMSIGIDIEHPVAHVHTQNGLAESFIKRIQLIARPLLMRCKLPISTWGHAILHAATLIR;Query_Seq=HDRLGHPGMIMMRKIIRTTSGHSLKNREILHPREYICTACAQGKLITRPSPVKIMNERITFLERIQGDICGPIHPACGPFRYFIVLIDASSRWSHVSLLSTRNHAFARLLSQIIRLRAHFPDYPVKKIRLDNAAEFTSRTFNNYCLAMGIDVEHPVEYVHTQNGLAESLIKRLQLIARPLLMKSKLPVTCWGHAIIHASSLIR;Identity=0.75;Similarity=0.9;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-scaffold146.1|size86774	dante	protein_domain	26313	27428	1060	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-RT__REXdb_ID2558|Class_I|LTR|Ty1/copia|Bianca:26322-27032[63percent];Best_Hit_DB_Pos=1:237of262;DB_Seq=WKDAIKAELYSLNKRKVFGPVVRTPKGVKPVGYKWVFVRKRNENGEIARYKARLVAQGFSQRPGIDFNETYSPVVDATTFRYLISLIAYEGLNLHMMDVVTAYLYGSLDSDIYMKIPEGFNLPDTNSSGSREDYSIKLNKSLYGLKQSGRMWYNRLSEYLLKEGYKNDSVCPCIFMKRSENEFAIIAVYVDDINIIGTPEELPKAIDCLKKEFEMKDLGKTKFCLGLQIEHLNNGIF;Query_Seq=WKDAIESELKSLNKRDVFGPVVRTPEGVQPVGYKWVFVRKRNDKGEISRYKARLVAQGFSQRPGIDYDETYSPVMDATTFRFLISLAIEYGLDLQLMDVVTAYLYGSLDCEIYMKIPEGFHMPERYSSEPRTDYAIKLNKSLYGLKQSGRMWYNRLSEYLIKEGYKNNLVCPCVFMKKFENEFVIIAVYVDDINIVGTQKALLDAVNCLKREFEMKDLGRTKYCLGLQIEYLKNGIF;Identity=0.78;Similarity=0.91;Relat_Length=0.905;Relat_Interruptions=0.0;Hit_to_DB_Length=0.9
-scaffold146.1|size86774	dante	protein_domain	27723	28124	581	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-RH__REXdb_ID2558|Class_I|LTR|Ty1/copia|Bianca:27723-28124[100percent];Best_Hit_DB_Pos=1:134of134;DB_Seq=DAGYLSDPHHGRSQTGYLFTSGNTAISWRSVKQTITATSSNHAELLALHEASRECVWLRSMIQHIQKNCGLSSGRMDATIIYEDNTACIAQLKEGYIKGDRTKHISPKFFFTHDLQKDGDISIQQIRSCDNLAD;Query_Seq=DAGYRSDPHNGRSQTGYVFLNKGAAISWRSTKQTIAATSSNHAELLAIHETSRECVWLRSMIESIYNACGLFTDKMPPTVLYEDNSACIIQLKEGYIKGDRTKHISPKFFFTHDLQKNGEVIIQQIRSSDNVAD;Identity=0.75;Similarity=0.84;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-scaffold146.1|size86774	dante	protein_domain	9780	9956	178	-	.	Name=INT;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand;Region_Hits_Classifications=INT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand;Best_Hit=Ty3-INT__REXdb_ID9635|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand:9783-9956[98percent];Best_Hit_DB_Pos=1:58of310;DB_Seq=HRGGCGEHGGARALIQKLHRAGYYWPGMKRDTHQYVQRCIQCQKFAPLIHKPGEEMTI;Query_Seq=HSGLCGNHPGARSLALRIQRAGYYWPTLLRDAMDCVRRCQSCQYFAPINRKPGAEITL;Identity=0.53;Similarity=0.69;Relat_Length=0.187;Relat_Interruptions=0.0;Hit_to_DB_Length=0.19
-scaffold146.1|size86774	dante	protein_domain	10299	10658	303	-	.	Name=aRH;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat;Region_Hits_Classifications=aRH|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand[360bp],aRH|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Ogre[360bp],aRH|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|TatII[360bp];Best_Hit=Ty3-aRH__REXdb_ID9546|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand:10299-10658[100percent];Best_Hit_DB_Pos=1:121of121;DB_Seq=WILHVDGASSKQGSGIGIRLQSPYGEVIEQSFCLAFNASNNEAEYESLLAGLRLAVGIGVTKLRAFCNSQLVANQFSGDYEAKDSRMEAYLAQVQELSKKFLSFELARIPRSENSAADSLA;Query_Seq=WNMYIDG-STQSGAGVGVHYITPYGDWINLAVKLQFPATNNVAEYEALLAGMNFALSLGVTRLKTFSDSQLVVEQFSGHFQAKEPMLEAYKSRSQLLAAKFSEFSLEHIPRESNRAADSLA;Identity=0.49;Similarity=0.7;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-scaffold146.1|size86774	dante	protein_domain	10701	10817	136	-	.	Name=RH;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat;Region_Hits_Classifications=RH|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Ogre[99bp],RH|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand[117bp];Best_Hit=Ty3-RH__REXdb_ID8372|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand:10701-10817[100percent];Best_Hit_DB_Pos=279:317of317;DB_Seq=NREGTGRVVKWAIELSEFDLHFEPRHAIKSQALADFVVE;Query_Seq=NTDHTSRLAKWAIKVSAMDIAFEPRKAIKGQALADFVVE;Identity=0.64;Similarity=0.77;Relat_Length=0.123;Relat_Interruptions=0.0;Hit_to_DB_Length=0.12
-scaffold146.1|size86774	dante	protein_domain	16797	17666	1057	-	.	Name=INT;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Region_Hits_Classifications=INT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Best_Hit=Ty3-INT__REXdb_ID6633|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila:16812-17666[98percent];Best_Hit_DB_Pos=1:285of313;DB_Seq=HSHSYGGHFGAKRTAHKVLESGFYWPSIFKDAYHFCKSCEKCQRTGNITHKNQMPLTNILVSEIFDVWGIDFMGPFPSSFGNLYILLVVDYVSKWIEAKATRTNDAKVVLDFVRTHIFNRFGIPKAIISDRGTHFCNRSMEALLRKYHVTHRTSTAYHPQTNGQAEISNREIKSILEKIVQPNRRDWSLRLGDALWAYRTAYKSPIGMSPYRMIYGKACHLPVELEHKAFWAIKQCNMDYDAAGIARKLQLQELEEIRNDAYENARIYKEKTKNLHDRMLTRKEF;Query_Seq=HASDYGGHFGPNRTARRILDVGFYWPSIFRDVYQFCRTCDACQRVGNITNRREMPQNYILANEIFDIWGLDFMGPFPQSQGNNYILVAVDYVSKWVEAIPTRTDDGKTVTEFLRKNIFTRYGVPKAIISDRGTHFCNSTMRAMMKKYNVIHKTTTAYHPQGNGQAEATNREIKSILEKVVNKKRSNWSQKLPDALWAYRTAYKTPIGTTPFRLIYGKHCNLPVGLEHKAYWAIREMNFEEGGDAELRQMQLQELDALRLEAYDNSRIYKERLKTYHDKKLLQQNF;Identity=0.61;Similarity=0.79;Relat_Length=0.911;Relat_Interruptions=0.0;Hit_to_DB_Length=0.91
-scaffold146.1|size86774	dante	protein_domain	18554	18811	306	-	.	Name=INT;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Region_Hits_Classifications=INT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Best_Hit=Ty3-INT__REXdb_ID6693|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila:18554-18802[96percent];Best_Hit_DB_Pos=231:313of313;DB_Seq=WALRLLNFDNNACGEKRKLQLQELEEMRLNAYESSRIYKERTKAYHDKKLQRREFQPGQQVLLFNSRLRLFPGKLKSKWSGPF;Query_Seq=WAIREMNFEEGGDAELRQMQLQELDALRLEAYDNSRIYKERLKAYHDKKILQQNFREGQQVLLFNSKLRLFPGKLKSRWMGPF;Identity=0.65;Similarity=0.82;Relat_Length=0.265;Relat_Interruptions=0.0;Hit_to_DB_Length=0.27
-scaffold146.1|size86774	dante	protein_domain	19158	19478	197	-	.	Name=INT;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Region_Hits_Classifications=INT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Best_Hit=Ty3-INT__REXdb_ID6659|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila:19182-19448[83percent];Best_Hit_DB_Pos=216:304of314;DB_Seq=YGKPCHLPVELEHKAWWAVKQCNMELDVAGQHRxLQLQELEEIRNDAYESSxIYKEKTKAFHDKQILRKNFEVGQKVLIFHSRLKLFPG;Query_Seq=FGKQCKVLVGMEHENYWEIREMNYEEGADVEQKQMQLQKMDALKLEAYDNSRIDKEKLKAHHAKRILQQNCKKRQQVLIFDSKLKMFPG;Identity=0.42;Similarity=0.71;Relat_Length=0.283;Relat_Interruptions=0.0;Hit_to_DB_Length=0.28
-scaffold146.1|size86774	dante	protein_domain	19976	20212	259	-	.	Name=PROT;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Region_Hits_Classifications=PROT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Best_Hit=Ty3-PROT__REXdb_ID6659|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila:19976-20212[100percent];Best_Hit_DB_Pos=1:80of80;DB_Seq=MLDLGASINVMPYSIYNSLNLGPMEETCIIIQLADRSNAYPKGVMEDVLVQVNELVFPADFYILKMEDELSPNPTPILLG;Query_Seq=MVDLGASINLMPYYIYSALKLGSLQGTAIIIKLADRSETHPEGVVKDVLAQVNNLVFPADFYVLKM-GEAENDDCPLLLG;Identity=0.62;Similarity=0.79;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-scaffold146.1|size86774	dante	protein_domain	28912	29124	216	-	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-PROT__REXdb_ID2599|Class_I|LTR|Ty1/copia|Bianca:28912-29124[100percent];Best_Hit_DB_Pos=1:71of71;DB_Seq=CLADCATTHTILRDKRYFLELTLIKANVSTISGTTNLVEGSGRANIMLPNGTRFHINDALYSSKSRRNLLS;Query_Seq=CLVDSATTHTILKNMRYFTSFEKRDVNIATIVCEANIVEGSGRAVIVLPSGTHIRIDDALYANKSRRNLLS;Identity=0.59;Similarity=0.7;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
--- a/tmp/single_fasta_filtered.gff3	Wed Jul 03 08:10:33 2019 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,33 +0,0 @@
-##gff-version 3
-##-----------------------------------------------
-##PIPELINE VERSION         : dante-rv-3081(adb2509)
-##PROTEIN DATABASE VERSION : Viridiplantae_v3.0_pdb
-##-----------------------------------------------
-##CLASSIFICATION	ORIGINAL_COUNTS	FILTERED_COUNTS
-##Ambiguous_domain	1	0
-##Class_I|LTR|Ty1/copia|Bianca	6	5
-##Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila	7	5
-##Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat	3	2
-##Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand	4	2
-##-----------------------------------------------
-##SEQ	DOMAIN	COUNTS
-##scaffold146.1|size86774	INT	3
-##scaffold146.1|size86774	PROT	4
-##scaffold146.1|size86774	RH	3
-##scaffold146.1|size86774	RT	3
-##scaffold146.1|size86774	aRH	1
-##-----------------------------------------------
-scaffold146.1|size86774	dante	protein_domain	976	1289	293	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-RH__REXdb_ID2558|Class_I|LTR|Ty1/copia|Bianca:976-1289[100percent];Best_Hit_DB_Pos=26:134of134;DB_Seq=ISWRSVKQTITATSSNHAELLALHEASRECVWLRSMIQHIQKNCG-LSSGRMDATIIYEDNTACIAQLKEGYIKGDRTKHISPKFF-FTHDLQKDGDISIQQIRSCDNLAD;Query_Seq=ISWRSTKQTIVAISSNHVELLAIHDTSRECVWLRFMIESI-----\IMXXXXXXXXXXXXXXXXXXQLKE*YIKCDRTKHISPKFF\FTQDLQKNGDVIIQQIRSNDNVVD;Identity=0.59;Similarity=0.66;Relat_Length=0.813;Relat_Interruptions=1.5;Hit_to_DB_Length=0.83
-scaffold146.1|size86774	dante	protein_domain	6810	7049	153	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand;Region_Hits_Classifications=PROT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand;Best_Hit=Ty3-PROT__REXdb_ID9702|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand:6810-7049[100percent];Best_Hit_DB_Pos=1:80of80;DB_Seq=LVDDGSKVNLLPYRVFQQMGIPEEQLVRDQAPVKGIGGVPVLVEGKVKLALTLGEAPRTRTHYAVFLVVKPPLSYNAILG;Query_Seq=LVDSGASCNLMSKRVMKQMGIPDEKLEFLDATLYAFDRRTIIPAGKIQLPVTLGEEERTRSEMVEFIIVDMDLAYNAILG;Identity=0.44;Similarity=0.62;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-scaffold146.1|size86774	dante	protein_domain	8756	9241	538	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat;Region_Hits_Classifications=RT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand[486bp],RT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Ogre[441bp];Best_Hit=Ty3-RT__REXdb_ID8210|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand:8801-9241[90percent];Best_Hit_DB_Pos=27:173of173;DB_Seq=DFTDLNKACPKDSFPLPHIDRLVDSTAGNELLTFMDAFSGYNQIMMNPEDQEKTSFITDRGIYCYKVMPFGLKNAGATYQRLVNKMFHNHLGKTMEVYIDDMLVKSLKKEDHVKHLEECFDILNKYQMKLNPAKCTFGVPSGEFLGY;Query_Seq=DFKGVNKHCQPDPFPLPHIDRLVDAVAGSSLLSTMDAYSGYHQISLAREDQAKSSFLTEDGVFCYVVMPFGLRNAGATYQRLVNKIFADLLGKEMEIYVDDMIVKSLNDEDHIIYLSHCFEVCRTHRLKLNPAKCCFGVRSGKFLGY;Identity=0.63;Similarity=0.8;Relat_Length=0.85;Relat_Interruptions=0.0;Hit_to_DB_Length=0.85
-scaffold146.1|size86774	dante	protein_domain	10810	11667	747	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand;Region_Hits_Classifications=INT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand;Best_Hit=Ty3-INT__REXdb_ID9633|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand:10819-11667[98percent];Best_Hit_DB_Pos=30:310of310;DB_Seq=RDTHQYVQRCIQCQKFAPLIHKPGEEMTIMSAPCPFAQWGIDLVGPFPQTAGRKKFFIVAVDYFTKWVEAEALSKITEDEVMHFIWKYICCRFGLPRSLVSDNGTQFNGKKIRAWCEEMKITQKFVAVAHPQANGQVESTNRTIVNGLKKRIDELGGSWVDELPSVLWSYRTSAKAATGETPFRLTYGTEAVIPVEVAMDTLRIATF--DEEANDGALRTRLDEIFDLREAAYLHMERSKNLIKARYDQGVRSRSFQIGDLILRRADALKHTGKLEANWEGPY;Query_Seq=RDAMDCVRRCQSCQYFAPINRKPGAEITLTELPCPFDRWGIDILGPFPQSVRQRRFCIVAVEYHSKWIEAEAVASITSEAVKKFVMNNIIVRFGCPRVLVSDNGPQFISDKFATFCEEYGIQQRTSSVYHPQTNGQAEASNKIILHGLRRNLDSLGGSWPDQLPHVLWAYRTTPKSSTGETPFSLVYGSEAVAPVESTIITPRIAAYMHTESANTEFRELDLDLLEERRNEVYGRVRKQQRALRKRYNQRVRPRQFEKGDLILRSVESQGHKGKLDRAWEGPY;Identity=0.49;Similarity=0.66;Relat_Length=0.906;Relat_Interruptions=0.0;Hit_to_DB_Length=0.91
-scaffold146.1|size86774	dante	protein_domain	14592	14828	289	+	.	Name=PROT;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Region_Hits_Classifications=PROT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Best_Hit=Ty3-PROT__REXdb_ID6659|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila:14592-14828[100percent];Best_Hit_DB_Pos=1:80of80;DB_Seq=MLDLGASINVMPYSIYNSLNLGPMEETCIIIQLADRSNAYPKGVMEDVLVQVNELVFPADFYILKMEDELSPNPTPILLG;Query_Seq=MVDLGASINLMPYSIYSALQLGPLQGTAIVIKLADRSNTHPEGVIEDVLVQVNNLVFPADFYVLKM-GKAENNDCPLLLG;Identity=0.68;Similarity=0.84;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-scaffold146.1|size86774	dante	protein_domain	15420	15995	871	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Region_Hits_Classifications=RT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Best_Hit=Ty3-RT__REXdb_ID6635|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila:15420-15995[100percent];Best_Hit_DB_Pos=1:192of192;DB_Seq=IYPITDSKWVAPIHVVPKKTGITLVKNKNDELIPTRISSGWRMCVDYRKLNLATRKDHFPLPFMDQMLERLAGKSFYCFLDGYSGYNQIVINPEDQEKTTFTCPFGTYAYRRMPFGLCNAPATFQRCMMSIFSDYVERIIEVFMDDFTVYGDSFDKCLENLSLILKRCIETNLVLNYEKCYFMVEQGIVLGH;Query_Seq=IYAISDSDWVSPVHVVPKKTGFTVERNKNGELVPKRVTNGWRVCIDYRKLNDATRKDHFPLPFIDQMLERLAGKKFYCFLDGYSGYNQVAIAPEDQEKTTFTCTYGTYAFRKMPFGLCNAPATFQRCMLSIFSEFTGKFIEVFMDDFTVYGDSFEGALENLEKVLQRCVEKKLVLNSEKCHFMVRQGIVLGH;Identity=0.76;Similarity=0.88;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-scaffold146.1|size86774	dante	protein_domain	16188	16634	623	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Region_Hits_Classifications=RH|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Best_Hit=Ty3-RH__REXdb_ID6648|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila:16188-16634[100percent];Best_Hit_DB_Pos=1:149of149;DB_Seq=FNEACKVAFDKLKELLTSAPIIQPPDWSLPFEIMCDASNYVVGAVLGQRVGRAAHVIYYTSRTLDSAQCNYSTTEKELLAIVFALEKFRSYLLGTKVIIFSDHAALRYLLAKKEAKPRLIRWILLLQEFNLEIRDKKGTENLVADHLSR;Query_Seq=FNQECQEAFNKLKSLLTAAPIIQPPNWELPFELMCDASNYALGAVLGQKIEGKRHVIYYASKTLSEAQIHYTTTEKELLAIVYALEKFRSYLLGTKITVHSDHAALRHLLSKKESKPRLIRWILLLQEFDLEIKDRAGTENAVADNLSR;Identity=0.74;Similarity=0.87;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-scaffold146.1|size86774	dante	protein_domain	24873	25481	913	+	.	Name=INT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=INT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-INT__REXdb_ID2558|Class_I|LTR|Ty1/copia|Bianca:24873-25481[100percent];Best_Hit_DB_Pos=1:203of203;DB_Seq=HERLGHPGSIMMRKIIEHSCGHQLKSREILQSNKFSCTSCSQGKLITRPSPTKIGSESLNFLERIHGDICGPIHPPCGPFRYFMVLIDASTRWSHVCLLSTRNQAFARLLAQLIRIRAHFPDYPVKKIRLDNAAEFSSQTFNDYCMSIGIDIEHPVAHVHTQNGLAESFIKRIQLIARPLLMRCKLPISTWGHAILHAATLIR;Query_Seq=HDRLGHPGMIMMRKIIRTTSGHSLKNREILHPREYICTACAQGKLITRPSPVKIMNERITFLERIQGDICGPIHPACGPFRYFIVLIDASSRWSHVSLLSTRNHAFARLLSQIIRLRAHFPDYPVKKIRLDNAAEFTSRTFNNYCLAMGIDVEHPVEYVHTQNGLAESLIKRLQLIARPLLMKSKLPVTCWGHAIIHASSLIR;Identity=0.75;Similarity=0.9;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-scaffold146.1|size86774	dante	protein_domain	26313	27428	1060	+	.	Name=RT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=RT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-RT__REXdb_ID2558|Class_I|LTR|Ty1/copia|Bianca:26322-27032[63percent];Best_Hit_DB_Pos=1:237of262;DB_Seq=WKDAIKAELYSLNKRKVFGPVVRTPKGVKPVGYKWVFVRKRNENGEIARYKARLVAQGFSQRPGIDFNETYSPVVDATTFRYLISLIAYEGLNLHMMDVVTAYLYGSLDSDIYMKIPEGFNLPDTNSSGSREDYSIKLNKSLYGLKQSGRMWYNRLSEYLLKEGYKNDSVCPCIFMKRSENEFAIIAVYVDDINIIGTPEELPKAIDCLKKEFEMKDLGKTKFCLGLQIEHLNNGIF;Query_Seq=WKDAIESELKSLNKRDVFGPVVRTPEGVQPVGYKWVFVRKRNDKGEISRYKARLVAQGFSQRPGIDYDETYSPVMDATTFRFLISLAIEYGLDLQLMDVVTAYLYGSLDCEIYMKIPEGFHMPERYSSEPRTDYAIKLNKSLYGLKQSGRMWYNRLSEYLIKEGYKNNLVCPCVFMKKFENEFVIIAVYVDDINIVGTQKALLDAVNCLKREFEMKDLGRTKYCLGLQIEYLKNGIF;Identity=0.78;Similarity=0.91;Relat_Length=0.905;Relat_Interruptions=0.0;Hit_to_DB_Length=0.9
-scaffold146.1|size86774	dante	protein_domain	27723	28124	581	+	.	Name=RH;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=RH|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-RH__REXdb_ID2558|Class_I|LTR|Ty1/copia|Bianca:27723-28124[100percent];Best_Hit_DB_Pos=1:134of134;DB_Seq=DAGYLSDPHHGRSQTGYLFTSGNTAISWRSVKQTITATSSNHAELLALHEASRECVWLRSMIQHIQKNCGLSSGRMDATIIYEDNTACIAQLKEGYIKGDRTKHISPKFFFTHDLQKDGDISIQQIRSCDNLAD;Query_Seq=DAGYRSDPHNGRSQTGYVFLNKGAAISWRSTKQTIAATSSNHAELLAIHETSRECVWLRSMIESIYNACGLFTDKMPPTVLYEDNSACIIQLKEGYIKGDRTKHISPKFFFTHDLQKNGEVIIQQIRSSDNVAD;Identity=0.75;Similarity=0.84;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-scaffold146.1|size86774	dante	protein_domain	10299	10658	303	-	.	Name=aRH;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat;Region_Hits_Classifications=aRH|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand[360bp],aRH|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Ogre[360bp],aRH|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|TatII[360bp];Best_Hit=Ty3-aRH__REXdb_ID9546|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Tat|Retand:10299-10658[100percent];Best_Hit_DB_Pos=1:121of121;DB_Seq=WILHVDGASSKQGSGIGIRLQSPYGEVIEQSFCLAFNASNNEAEYESLLAGLRLAVGIGVTKLRAFCNSQLVANQFSGDYEAKDSRMEAYLAQVQELSKKFLSFELARIPRSENSAADSLA;Query_Seq=WNMYIDG-STQSGAGVGVHYITPYGDWINLAVKLQFPATNNVAEYEALLAGMNFALSLGVTRLKTFSDSQLVVEQFSGHFQAKEPMLEAYKSRSQLLAAKFSEFSLEHIPRESNRAADSLA;Identity=0.49;Similarity=0.7;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-scaffold146.1|size86774	dante	protein_domain	16797	17666	1057	-	.	Name=INT;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Region_Hits_Classifications=INT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Best_Hit=Ty3-INT__REXdb_ID6633|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila:16812-17666[98percent];Best_Hit_DB_Pos=1:285of313;DB_Seq=HSHSYGGHFGAKRTAHKVLESGFYWPSIFKDAYHFCKSCEKCQRTGNITHKNQMPLTNILVSEIFDVWGIDFMGPFPSSFGNLYILLVVDYVSKWIEAKATRTNDAKVVLDFVRTHIFNRFGIPKAIISDRGTHFCNRSMEALLRKYHVTHRTSTAYHPQTNGQAEISNREIKSILEKIVQPNRRDWSLRLGDALWAYRTAYKSPIGMSPYRMIYGKACHLPVELEHKAFWAIKQCNMDYDAAGIARKLQLQELEEIRNDAYENARIYKEKTKNLHDRMLTRKEF;Query_Seq=HASDYGGHFGPNRTARRILDVGFYWPSIFRDVYQFCRTCDACQRVGNITNRREMPQNYILANEIFDIWGLDFMGPFPQSQGNNYILVAVDYVSKWVEAIPTRTDDGKTVTEFLRKNIFTRYGVPKAIISDRGTHFCNSTMRAMMKKYNVIHKTTTAYHPQGNGQAEATNREIKSILEKVVNKKRSNWSQKLPDALWAYRTAYKTPIGTTPFRLIYGKHCNLPVGLEHKAYWAIREMNFEEGGDAELRQMQLQELDALRLEAYDNSRIYKERLKTYHDKKLLQQNF;Identity=0.61;Similarity=0.79;Relat_Length=0.911;Relat_Interruptions=0.0;Hit_to_DB_Length=0.91
-scaffold146.1|size86774	dante	protein_domain	19976	20212	259	-	.	Name=PROT;Final_Classification=Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Region_Hits_Classifications=PROT|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila;Best_Hit=Ty3-PROT__REXdb_ID6659|Class_I|LTR|Ty3/gypsy|non-chromovirus|OTA|Athila:19976-20212[100percent];Best_Hit_DB_Pos=1:80of80;DB_Seq=MLDLGASINVMPYSIYNSLNLGPMEETCIIIQLADRSNAYPKGVMEDVLVQVNELVFPADFYILKMEDELSPNPTPILLG;Query_Seq=MVDLGASINLMPYYIYSALKLGSLQGTAIIIKLADRSETHPEGVVKDVLAQVNNLVFPADFYVLKM-GEAENDDCPLLLG;Identity=0.62;Similarity=0.79;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0
-scaffold146.1|size86774	dante	protein_domain	28912	29124	216	-	.	Name=PROT;Final_Classification=Class_I|LTR|Ty1/copia|Bianca;Region_Hits_Classifications=PROT|Class_I|LTR|Ty1/copia|Bianca;Best_Hit=Ty1-PROT__REXdb_ID2599|Class_I|LTR|Ty1/copia|Bianca:28912-29124[100percent];Best_Hit_DB_Pos=1:71of71;DB_Seq=CLADCATTHTILRDKRYFLELTLIKANVSTISGTTNLVEGSGRANIMLPNGTRFHINDALYSSKSRRNLLS;Query_Seq=CLVDSATTHTILKNMRYFTSFEKRDVNIATIVCEANIVEGSGRAVIVLPSGTHIRIDDALYANKSRRNLLS;Identity=0.59;Similarity=0.7;Relat_Length=1.0;Relat_Interruptions=0.0;Hit_to_DB_Length=1.0