Mercurial > repos > petr-novak > re_utils

changeset 23:36c418bca8b2 draft

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planemo upload commit 20bdf879b52796d3fb251a20807191ff02084d3c-dirty
author petr-novak
date Wed, 02 Aug 2023 11:50:25 +0000
parents 58807b35777a
children b50db133106a
files ChipSeqRatioDef.xml extract_contigs_from_archive.xml extract_files_from_re_archive.xml fastq_name_affixer.xml paired_fastq_filtering.xml
diffstat 5 files changed, 6 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/ChipSeqRatioDef.xml	Wed Aug 02 11:31:12 2023 +0000
+++ b/ChipSeqRatioDef.xml	Wed Aug 02 11:50:25 2023 +0000
@@ -1,4 +1,4 @@
-<tool id="chip_seq_ratio_1" name="ChIP-Seq Mapper" version="0.1.1.3">
+<tool id="chip_seq_ratio_1" name="ChIP-Seq Mapper" version="1.1.1.3">
   <stdio>
     <exit_code range="1:" level="fatal" description="Error"/>
   </stdio>
--- a/extract_contigs_from_archive.xml	Wed Aug 02 11:31:12 2023 +0000
+++ b/extract_contigs_from_archive.xml	Wed Aug 02 11:50:25 2023 +0000
@@ -1,4 +1,4 @@
-<tool id="extract_contigs" name="Extract contigs from RepeatExplorer2 archive">
+<tool id="extract_contigs" name="Extract contigs from RepeatExplorer2 archive" version="1.0.0.3">
   <command detect_errors="exit_code">
     unzip -p ${RepeatExplorer_archive} contigs.fasta  &gt; ${contigs}
     &amp;&amp;
--- a/extract_files_from_re_archive.xml	Wed Aug 02 11:31:12 2023 +0000
+++ b/extract_files_from_re_archive.xml	Wed Aug 02 11:50:25 2023 +0000
@@ -1,4 +1,4 @@
-<tool id="extract_var_files_from_re" name="Extract various files from RepeatExplorer2 archive">
+<tool id="extract_var_files_from_re" name="Extract various files from RepeatExplorer2 archive" version="1.0.0.3">
   <command detect_errors="exit_code">
 
     #for $sf in $file:
--- a/fastq_name_affixer.xml	Wed Aug 02 11:31:12 2023 +0000
+++ b/fastq_name_affixer.xml	Wed Aug 02 11:50:25 2023 +0000
@@ -1,4 +1,4 @@
-<tool id="names_affixer" name="FASTQ Read name affixer" version="1.0.0">
+<tool id="names_affixer" name="FASTQ Read name affixer" version="1.0.0.3">
     <description>Tool appending suffix and prefix to sequences names</description>
     <required_files>
         <include type="literal" path="name_affixer.py"/>
--- a/paired_fastq_filtering.xml	Wed Aug 02 11:31:12 2023 +0000
+++ b/paired_fastq_filtering.xml	Wed Aug 02 11:50:25 2023 +0000
@@ -1,6 +1,6 @@
-<tool id="paired_fastq_filtering" name="Preprocessing of FASTQ paired-end reads">
+<tool id="paired_fastq_filtering" name="Preprocessing of FASTQ paired-end reads" version="1.0.0.3">
     <stdio>
-        <exit_code range="1:" level="fatal" description="Error" version="1.0.0.3"/>
+        <exit_code range="1:" level="fatal" description="Error"/>
     </stdio>
     <description>
         Preprocessing of paired-end reads in FASTQ format