diff rankfilter_GCMS/test/test_pdfread.py @ 0:9d5f4f5f764b

Initial commit to toolshed

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/rankfilter_GCMS/test/test_pdfread.py	Thu Jan 16 13:10:00 2014 +0100
@@ -0,0 +1,30 @@
+'''
+Created on Mar 13, 2012
+
+@author: marcelk
+'''
+from GCMS.rankfilter_GCMS import pdfread  # @UnresolvedImport
+from pkg_resources import resource_filename  # @UnresolvedImport # pylint: disable=E0611
+import unittest
+
+
+class Test(unittest.TestCase):
+
+    def setUp(self):
+        self.nist_pdf = resource_filename(__name__, "data/NIST_test_PDF.txt")
+
+    def test_getPDF(self):
+        '''
+        Tests the reading and parsing of a NIST PDF file
+        '''
+        [hitlist, hitlist_missed] = pdfread.getPDF(self.nist_pdf)
+        rows = [hitlist[row] for row in hitlist.keys()]
+        data = [set(row) for row in zip(*rows)]
+        expected_element = set(('12.3', ' Sucrose ', '14', 'undef', ' standards 2009', ' 660', 'not_def',
+        '18495-0.142537-21284-2.26544e+07-135', '22.6544', ' 714'))
+        self.failUnless(expected_element in data)
+        self.failUnless(len(hitlist_missed) != 0)
+
+if __name__ == "__main__":
+    #import sys;sys.argv = ['', 'Test.test_getPDF']
+    unittest.main()